Rroxscaffold_7G00181300

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0016262
Physical Location & Seq
Forward (+)
20474620 .. 20476729
2110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00181300.1

Sequence Viewer

Length: 1506 bp
ATGAAAGCAGAATTTGAAATGGTTCATGGGACTGTGAATATGATCCAACCCCATGAAACTAATTGGATTAACAATTCGACCTCCGTTAATCCATTCCCAAAGCCTGTAAGCGATCTCTCTCAGTGGGTAGAGCACATAACGAAGCAACTCATCGATGACTTGCCGGAAACAGCCACCACCACCGCAGACACTTTGCACACTGCAGCAACATCCGGGGATCAGTACTTCATCCCCTCGTCACATTCCGGAGAGTTTAGTCCGAGAAAAACCCCCAGGAAAAACTACGGCGACGACACAAGTGCTGATCGTGCAGATTACGACTTGCAGTGGGGAAATGAGCTGCAACTCCATGCAGAAAACAACAGGAGAGCTAGAGGGTTGAGTAAGCTTGATCAGCATGGCTTAAGCCTAATTACTCTTCTGTTCGAATGTGCGGTTGCAATCTCCGTGGAGAACCCCGGCGAGGCACATCGGATGCTGCTCGAGCTCACCCAGATGGCCTCGCCGTATGGGCCATCCTGCGCGGAGCGCGTGGTGGCATATTTTGCCAAGGCCATGTCGAGTAGGGTTTTGAACTCGTGGCTAGGCATTTGCTCTCCTTTGGTCAACTACAAAAGCATTCATGGTGCTTTTCAAGTCTTTAACACTATCTCGCCTTTCATCAAGTTCGCTCACTTCACTTCCAACCAAGCCATCCTCGAAGCCTTTCACCGCCGTGACAGGGTGCACATTATCGACCTCGATATCATGCAGGGTTTGCAATGGCCAGCCCTTTTTCACATCCTCGCCACACGCATGGAAGGGCCTCCACACGTACGAATGACCGGCTTCGGCGCCTCATCTGAGGTATTGCTTGAGACCGGAAAGCAACTTTCAAATTTTGCCAGGCGACTGGGCTTGTCATTTGAGTTTCATCCAATCACAAGGAAATTCGGTGACCACCTAGACACTTCAATGGTGCAAGTGCGGAGGGGAGAGACTGTAGCAGTGCATTGGCTACAGCACTCGCTCTACGATGCAACAGGACCCGACTGGAGAACAATGAAACTCATCGAAGAACTATCCCCGAGAATCATCACATTGGTGGAGCAAGACATGTCGCACAATGGGGGCTCGTTTTTGGACCGTTTTGTCGGGTCTTTGCACTACTATTCAACCATGTTTGATTCTCTTGAAGCCTATTTGCCCAGTGATAACCCTAACAGGCATTTAGTTGAACACAGCTTGATGTATAGGGAAATCAACAACATATTGGCAGTAGGCGGGCCAGCAAGGAGCGGAGCAGACAAGTTTAGGCATTGGAGGAGTGAGCTCGGGGCTAGCAATAGCTTCATGCAAGTAGGTATGAGTGGACATTCGATGGCTCAGGCGCAGTTGATATTGAACATGTTTCCTCCTAGTGGTTATAACCTTGTACATGGAGATGGGACGATTAGGCTTGGGTGGAAGGATACTAGTTTATATGTTGCCTCAGCATGGACTTGTTCGCATGCTTCATCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

501

Amino Acids

56.27

Weight (kDa)

6.35

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 138 - 494 1.6e-109 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g21170
malus_domestica MD05G1194300.v1.1 MD10G1181000.v1.1
prunus_persica Prupe.8G220900_v2.0.a1
pyrus_communis pycom10g15680
rosa_chinensis RchiOBHm_Chr6g0287671
rosa_laevigata RLG00000012475
rosa_multiflora Rmu_sc0001813.1_g000002
rosa_roxburghii Rroxscaffold_7G00181300
rosa_rugosa Rorug06G0190500
rosa_samantha Rh6AG301000 Rh6CG302800 Rh6CG314900 Rh6DG298400
rosa_wichuraiana Rw6G025970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1407
AasI GACNNNNNNGTC 1 cut(s) 1130
AccB1I GGYRCC 1 cut(s) 833
AccBSI CCGCTC 1 cut(s) 1278
AccII CGCG 2 cut(s) 524, 531
AccIII TCCGGA 1 cut(s) 245
AciI CCGC 7 cut(s) 183, 434, 524, 712, 967, 1263, 1278
AclWI GGATC 2 cut(s) 37, 225
AcoI YGGCCR 1 cut(s) 764
AcsI RAATTY 3 cut(s) 11, 877, 929
AcyI GRCGYC 1 cut(s) 834
AfaI GTAC 3 cut(s) 224, 816, 1416
AfiI CCNNNNNNNGG 4 cut(s) 463, 721, 1400, 1476
AflII CTTAAG 1 cut(s) 403
AflIII ACRYGT 3 cut(s) 811, 1095, 1386
AgsI TTSAA 9 cut(s) 17, 574, 635, 876, 954, 1155, 1175, 1217, 1384
AhlI ACTAGT 1 cut(s) 1454
AjnI CCWGG 2 cut(s) 272, 884
AleI CACNNNNGTG 2 cut(s) 714, 1082
AluBI AGCT 7 cut(s) 340, 371, 388, 487, 1224, 1312, 1329
AluI AGCT 7 cut(s) 340, 371, 388, 487, 1224, 1312, 1329
Alw21I GWGCWC 4 cut(s) 135, 489, 729, 1314
Alw26I GTCTC 2 cut(s) 851, 971
Alw44I GTGCAC 1 cut(s) 725
AlwI GGATC 2 cut(s) 37, 225
Ama87I CYCGRG 3 cut(s) 482, 1066, 1313
Aor13HI TCCGGA 1 cut(s) 245
AoxI GGCC 6 cut(s) 498, 512, 552, 764, 803, 1265
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 3 cut(s) 203, 340, 478
ApoI RAATTY 3 cut(s) 11, 877, 929
Asp700I GAANNNNTTC 2 cut(s) 21, 705
AspLEI GCGC 4 cut(s) 524, 531, 836, 1372
AspS9I GGNCC 5 cut(s) 512, 803, 1025, 1123, 1265
AsuC2I CCSGG 2 cut(s) 214, 459
AsuHPI GGTGA 3 cut(s) 481, 701, 947
AsuII TTCGAA 1 cut(s) 426
AsuNHI GCTAGC 1 cut(s) 1319
AvaI CYCGRG 3 cut(s) 482, 1066, 1313
AvaII GGWCC 2 cut(s) 1025, 1123
BaeGI GKGCMC 1 cut(s) 729
BalI TGGCCA 1 cut(s) 766
BanI GGYRCC 1 cut(s) 833
BanII GRGCYC 3 cut(s) 489, 1115, 1314
BauI CACGAG 1 cut(s) 577
Bbv12I GWGCWC 4 cut(s) 135, 489, 729, 1314
BbvCI CCTCAGC 1 cut(s) 1471
BbvI GCAGC 3 cut(s) 215, 327, 465
BccI CCATC 5 cut(s) 490, 523, 701, 1354, 1418
BceAI ACGGC 3 cut(s) 301, 490, 699
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciT130I CCWGG 2 cut(s) 274, 886
BciVI GTATCC 1 cut(s) 1444
BclI TGATCA 1 cut(s) 391
BcnI CCSGG 2 cut(s) 214, 459
BcoDI GTCTC 2 cut(s) 851, 971
BcuI ACTAGT 1 cut(s) 1454
BfaI CTAG 6 cut(s) 372, 584, 944, 1320, 1398, 1455
BfmI CTRYAG 3 cut(s) 201, 981, 998
BfoI RGCGCY 1 cut(s) 837
BfrI CTTAAG 1 cut(s) 403
BfuI GTATCC 1 cut(s) 1444
BglI GCCNNNNNGGC 1 cut(s) 511
BisI GCNGC 3 cut(s) 204, 341, 479
BlsI GCNGC 3 cut(s) 205, 342, 480
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 4 cut(s) 214, 274, 459, 886
Bme18I GGWCC 2 cut(s) 1025, 1123
BmeT110I CYCGRG 3 cut(s) 482, 1066, 1313
BmgT120I GGNCC 5 cut(s) 512, 803, 1025, 1123, 1265
BmiI GGNNCC 2 cut(s) 835, 1027
BmrFI CCNGG 4 cut(s) 214, 274, 459, 886
BmrI ACTGGG 2 cut(s) 902, 1182
BmsI GCATC 2 cut(s) 465, 1006
BmtI GCTAGC 1 cut(s) 1323
BmuI ACTGGG 2 cut(s) 902, 1182
BpmI CTGGAG 1 cut(s) 1054
Bpu10I CCTNAGC 2 cut(s) 1365, 1471
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 1 cut(s) 875
BpuMI CCSGG 2 cut(s) 214, 459
Bsa29I ATCGAT 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 814
BsaHI GRCGYC 1 cut(s) 834
BsaI GGTCTC 1 cut(s) 851
BsaJI CCNNGG 5 cut(s) 213, 272, 447, 457, 549
BsaWI WCCGGW 2 cut(s) 245, 860
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 4 cut(s) 463, 721, 1400, 1476
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 3 cut(s) 897, 1037, 1188
Bse3DI GCAATG 1 cut(s) 767
BseAI TCCGGA 1 cut(s) 245
BseBI CCWGG 2 cut(s) 274, 886
BseCI ATCGAT 1 cut(s) 153
BseDI CCNNGG 5 cut(s) 213, 272, 447, 457, 549
BseGI GGATG 7 cut(s) 209, 228, 480, 515, 693, 780, 913
BseLI CCNNNNNNNGG 4 cut(s) 463, 721, 1400, 1476
BseMI GCAATG 1 cut(s) 767
BseMII CTCAG 4 cut(s) 134, 834, 1379, 1485
BseNI ACTGG 3 cut(s) 897, 1037, 1188
BseRI GAGGAG 1 cut(s) 1318
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 3 cut(s) 215, 327, 465
BsgI GTGCAG 1 cut(s) 330
Bsh1236I CGCG 2 cut(s) 524, 531
BshFI GGCC 6 cut(s) 500, 514, 554, 766, 805, 1267
BshNI GGYRCC 1 cut(s) 833
BshVI ATCGAT 1 cut(s) 153
BsiHKAI GWGCWC 4 cut(s) 135, 489, 729, 1314
BsiHKCI CYCGRG 3 cut(s) 482, 1066, 1313
BsiSI CCGG 6 cut(s) 164, 213, 246, 459, 825, 861
BsiWI CGTACG 1 cut(s) 814
BslFI GGGAC 2 cut(s) 43, 1441
BslI CCNNNNNNNGG 4 cut(s) 463, 721, 1400, 1476
BsmAI GTCTC 2 cut(s) 851, 971
BsmFI GGGAC 2 cut(s) 43, 1441
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 6 cut(s) 500, 514, 554, 766, 805, 1267
Bso31I GGTCTC 1 cut(s) 851
BsoBI CYCGRG 3 cut(s) 482, 1066, 1313
Bsp119I TTCGAA 1 cut(s) 426
Bsp1286I GDGCHC 5 cut(s) 135, 489, 729, 1115, 1314
Bsp13I TCCGGA 1 cut(s) 245
Bsp1407I TGTACA 1 cut(s) 1414
Bsp143I GATC 5 cut(s) 42, 112, 217, 304, 391
BspACI CCGC 7 cut(s) 183, 434, 524, 712, 967, 1263, 1278
BspANI GGCC 6 cut(s) 500, 514, 554, 766, 805, 1267
BspCNI CTCAG 4 cut(s) 133, 835, 1378, 1484
BspDI ATCGAT 1 cut(s) 153
BspEI TCCGGA 1 cut(s) 245
BspFNI CGCG 2 cut(s) 524, 531
BspLI GGNNCC 2 cut(s) 835, 1027
BspMAI CTGCAG 1 cut(s) 205
BspOI GCTAGC 1 cut(s) 1323
BspPI GGATC 2 cut(s) 37, 225
BspT104I TTCGAA 1 cut(s) 426
BspT107I GGYRCC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 403
BspTNI GGTCTC 1 cut(s) 851
BsrBI CCGCTC 1 cut(s) 1278
BsrDI GCAATG 1 cut(s) 767
BsrFI RCCGGY 1 cut(s) 824
BsrGI TGTACA 1 cut(s) 1414
BsrI ACTGG 3 cut(s) 897, 1037, 1188
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 5 cut(s) 213, 272, 447, 457, 549
BssMI GATC 5 cut(s) 42, 112, 217, 304, 391
BssNI GRCGYC 1 cut(s) 834
BssSI CACGAG 1 cut(s) 577
BssT1I CCWWGG 1 cut(s) 549
Bst2BI CACGAG 1 cut(s) 577
Bst2UI CCWGG 2 cut(s) 274, 886
Bst4CI ACNGT 3 cut(s) 34, 982, 1127
Bst6I CTCTTC 1 cut(s) 423
BstACI GRCGYC 1 cut(s) 834
BstAFI CTTAAG 1 cut(s) 403
BstAPI GCANNNNNTGC 2 cut(s) 545, 757
BstAUI TGTACA 1 cut(s) 1414
BstBAI YACGTR 1 cut(s) 814
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 5 cut(s) 768, 1265, 1269, 1321, 1491
BstDEI CTNAG 4 cut(s) 120, 843, 1365, 1471
BstDSI CCRYGG 1 cut(s) 447
BstEII GGTNACC 1 cut(s) 935
BstF5I GGATG 7 cut(s) 209, 228, 480, 515, 693, 780, 913
BstFNI CGCG 2 cut(s) 524, 531
BstH2I RGCGCY 1 cut(s) 837
BstHHI GCGC 4 cut(s) 524, 531, 836, 1372
BstKTI GATC 5 cut(s) 45, 115, 220, 307, 394
BstMAI GTCTC 2 cut(s) 851, 971
BstMBI GATC 5 cut(s) 42, 112, 217, 304, 391
BstMWI GCNNNNNNNGC 7 cut(s) 308, 394, 484, 511, 528, 545, 757
BstNI CCWGG 2 cut(s) 274, 886
BstNSI RCATGY 3 cut(s) 1099, 1390, 1493
BstPI GGTNACC 1 cut(s) 935
BstSCI CCNGG 4 cut(s) 212, 272, 457, 884
BstSFI CTRYAG 3 cut(s) 201, 981, 998
BstSLI GKGCMC 1 cut(s) 729
BstUI CGCG 2 cut(s) 524, 531
BstV1I GCAGC 3 cut(s) 215, 327, 465
BstXI CCANNNNNNTGG 2 cut(s) 796, 892
Bsu15I ATCGAT 1 cut(s) 153
BsuI GTATCC 1 cut(s) 1444
BsuRI GGCC 6 cut(s) 500, 514, 554, 766, 805, 1267
BsuTUI ATCGAT 1 cut(s) 153
BtgI CCRYGG 1 cut(s) 447
BtsCI GGATG 7 cut(s) 209, 228, 480, 515, 693, 780, 913
BtsI GCAGTG 3 cut(s) 198, 332, 993
BtsIMutI CAGTG 5 cut(s) 128, 198, 332, 993, 1195
Cac8I GCNNGC 5 cut(s) 768, 1265, 1269, 1321, 1491
CfoI GCGC 4 cut(s) 524, 531, 836, 1372
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 5 cut(s) 512, 803, 1025, 1123, 1265
ClaI ATCGAT 1 cut(s) 153
Csp6I GTAC 3 cut(s) 223, 815, 1415
CspCI CAANNNNNGTGG 2 cut(s) 429, 464
CviQI GTAC 3 cut(s) 223, 815, 1415
DdeI CTNAG 4 cut(s) 120, 843, 1365, 1471
DinI GGCGCC 1 cut(s) 835
DpnI GATC 5 cut(s) 44, 114, 219, 306, 393
DpnII GATC 5 cut(s) 42, 112, 217, 304, 391
DrdI GACNNNNNNGTC 1 cut(s) 1130
DseDI GACNNNNNNGTC 1 cut(s) 1130
EaeI YGGCCR 1 cut(s) 764
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Ecl136II GAGCTC 2 cut(s) 487, 1312
Eco130I CCWWGG 1 cut(s) 549
Eco24I GRGCYC 3 cut(s) 489, 1115, 1314
Eco31I GGTCTC 1 cut(s) 851
Eco32I GATATC 1 cut(s) 745
Eco47I GGWCC 2 cut(s) 1025, 1123
Eco53kI GAGCTC 2 cut(s) 487, 1312
Eco88I CYCGRG 3 cut(s) 482, 1066, 1313
Eco91I GGTNACC 1 cut(s) 935
EcoICRI GAGCTC 2 cut(s) 487, 1312
EcoO109I RGGNCCY 2 cut(s) 803, 1025
EcoO65I GGTNACC 1 cut(s) 935
EcoRII CCWGG 2 cut(s) 272, 884
EcoRV GATATC 1 cut(s) 745
EcoT14I CCWWGG 1 cut(s) 549
EcoT38I GRGCYC 3 cut(s) 489, 1115, 1314
EgeI GGCGCC 1 cut(s) 835
EheI GGCGCC 1 cut(s) 835
ErhI CCWWGG 1 cut(s) 549
FaqI GGGAC 2 cut(s) 43, 1441
FauI CCCGC 1 cut(s) 1256
FbaI TGATCA 1 cut(s) 391
Fnu4HI GCNGC 3 cut(s) 204, 341, 479
FokI GGATG 7 cut(s) 196, 215, 487, 502, 680, 767, 900
FriOI GRGCYC 3 cut(s) 489, 1115, 1314
Fsp4HI GCNGC 3 cut(s) 204, 341, 479
FspBI CTAG 6 cut(s) 372, 584, 944, 1320, 1398, 1455
GlaI GCGC 4 cut(s) 523, 530, 835, 1371
GluI GCNGC 3 cut(s) 204, 341, 479
GsuI CTGGAG 1 cut(s) 1054
HaeII RGCGCY 1 cut(s) 837
HaeIII GGCC 6 cut(s) 500, 514, 554, 766, 805, 1267
HapII CCGG 6 cut(s) 164, 213, 246, 459, 825, 861
HhaI GCGC 4 cut(s) 524, 531, 836, 1372
Hin1I GRCGYC 1 cut(s) 834
Hin6I GCGC 4 cut(s) 522, 529, 834, 1370
HinP1I GCGC 4 cut(s) 522, 529, 834, 1370
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 2 cut(s) 1071, 1166
HpaII CCGG 6 cut(s) 164, 213, 246, 459, 825, 861
HphI GGTGA 3 cut(s) 481, 701, 947
Hpy166II GTNNAC 3 cut(s) 607, 727, 1352
Hpy188I TCNGA 3 cut(s) 261, 474, 844
Hpy188III TCNNGA 3 cut(s) 246, 1172, 1500
Hpy8I GTNNAC 3 cut(s) 607, 727, 1352
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 2 cut(s) 794, 1441
HpyCH4III ACNGT 3 cut(s) 34, 982, 1127
HpyCH4IV ACGT 1 cut(s) 813
HpyF10VI GCNNNNNNNGC 7 cut(s) 308, 394, 484, 511, 528, 545, 757
HpyF3I CTNAG 4 cut(s) 120, 843, 1365, 1471
HpySE526I ACGT 1 cut(s) 813
Hsp92I GRCGYC 1 cut(s) 834
HspAI GCGC 4 cut(s) 522, 529, 834, 1370
KasI GGCGCC 1 cut(s) 833
Kpn2I TCCGGA 1 cut(s) 245
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 5 cut(s) 42, 112, 217, 304, 391
LmnI GCTCC 4 cut(s) 526, 1087, 1275, 1280
Lsp1109I GCAGC 3 cut(s) 215, 327, 465
LweI GCATC 2 cut(s) 465, 1006
MaeI CTAG 6 cut(s) 372, 584, 944, 1320, 1398, 1455
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 3 cut(s) 237, 716, 935
MalI GATC 5 cut(s) 44, 114, 219, 306, 393
MbiI CCGCTC 1 cut(s) 1278
MboI GATC 5 cut(s) 42, 112, 217, 304, 391
MboII GAAGA 2 cut(s) 410, 1067
MhlI GDGCHC 5 cut(s) 135, 489, 729, 1115, 1314
MlsI TGGCCA 1 cut(s) 766
MluCI AATT 6 cut(s) 11, 61, 73, 411, 877, 929
MluNI TGGCCA 1 cut(s) 766
Mly113I GGCGCC 1 cut(s) 834
MmeI TCCRAC 2 cut(s) 70, 708
Mox20I TGGCCA 1 cut(s) 766
MroI TCCGGA 1 cut(s) 245
MroXI GAANNNNTTC 2 cut(s) 21, 705
MscI TGGCCA 1 cut(s) 766
MseI TTAA 4 cut(s) 69, 87, 404, 642
MslI CAYNNNNRTG 6 cut(s) 494, 714, 794, 953, 1082, 1422
Msp20I TGGCCA 1 cut(s) 766
MspCI CTTAAG 1 cut(s) 403
MspI CCGG 6 cut(s) 164, 213, 246, 459, 825, 861
MspR9I CCNGG 4 cut(s) 214, 274, 459, 886
Mva1269I GAATGC 1 cut(s) 618
MvaI CCWGG 2 cut(s) 274, 886
MvnI CGCG 2 cut(s) 524, 531
MwoI GCNNNNNNNGC 7 cut(s) 308, 394, 484, 511, 528, 545, 757
NarI GGCGCC 1 cut(s) 834
NciI CCSGG 2 cut(s) 214, 459
NdeII GATC 5 cut(s) 42, 112, 217, 304, 391
NheI GCTAGC 1 cut(s) 1319
NlaIV GGNNCC 2 cut(s) 835, 1027
NmuCI GTSAC 3 cut(s) 237, 716, 935
NspI RCATGY 3 cut(s) 1099, 1390, 1493
NspV TTCGAA 1 cut(s) 426
OliI CACNNNNGTG 2 cut(s) 714, 1082
PaeI GCATGC 1 cut(s) 1493
PaeR7I CTCGAG 1 cut(s) 482
PciI ACATGT 2 cut(s) 1095, 1386
PctI GAATGC 1 cut(s) 618
PdmI GAANNNNTTC 2 cut(s) 21, 705
PfeI GAWTC 2 cut(s) 1071, 1166
Pfl23II CGTACG 1 cut(s) 814
PkrI GCNGC 3 cut(s) 205, 342, 480
PluTI GGCGCC 1 cut(s) 837
Ppu21I YACGTR 1 cut(s) 814
PpuMI RGGWCCY 1 cut(s) 1025
PscI ACATGT 2 cut(s) 1095, 1386
PsiI TTATAA 1 cut(s) 1407
Psp124BI GAGCTC 2 cut(s) 489, 1314
Psp5II RGGWCCY 1 cut(s) 1025
Psp6I CCWGG 2 cut(s) 272, 884
PspEI GGTNACC 1 cut(s) 935
PspGI CCWGG 2 cut(s) 272, 884
PspLI CGTACG 1 cut(s) 814
PspN4I GGNNCC 2 cut(s) 835, 1027
PspPI GGNCC 5 cut(s) 512, 803, 1025, 1123, 1265
PspPPI RGGWCCY 1 cut(s) 1025
PspXI VCTCGAGB 1 cut(s) 482
PstI CTGCAG 1 cut(s) 205
RsaI GTAC 3 cut(s) 224, 816, 1416
RsaNI GTAC 3 cut(s) 223, 815, 1415
RseI CAYNNNNRTG 6 cut(s) 494, 714, 794, 953, 1082, 1422
SacI GAGCTC 2 cut(s) 489, 1314
SaqAI TTAA 4 cut(s) 69, 87, 404, 642
SatI GCNGC 3 cut(s) 204, 341, 479
Sau3AI GATC 5 cut(s) 42, 112, 217, 304, 391
Sau96I GGNCC 5 cut(s) 512, 803, 1025, 1123, 1265
ScaI AGTACT 1 cut(s) 224
ScrFI CCNGG 4 cut(s) 214, 274, 459, 886
SduI GDGCHC 5 cut(s) 135, 489, 729, 1115, 1314
SfaNI GCATC 2 cut(s) 465, 1006
SfcI CTRYAG 3 cut(s) 201, 981, 998
SfoI GGCGCC 1 cut(s) 835
Sfr274I CTCGAG 1 cut(s) 482
SfuI TTCGAA 1 cut(s) 426
SinI GGWCC 2 cut(s) 1025, 1123
SlaI CTCGAG 1 cut(s) 482
SmiMI CAYNNNNRTG 6 cut(s) 494, 714, 794, 953, 1082, 1422
SmlI CTYRAG 3 cut(s) 403, 482, 854
SmoI CTYRAG 3 cut(s) 403, 482, 854
SpeI ACTAGT 1 cut(s) 1454
SphI GCATGC 1 cut(s) 1493
Sse9I AATT 6 cut(s) 11, 61, 73, 411, 877, 929
SsiI CCGC 7 cut(s) 183, 434, 524, 712, 967, 1263, 1278
SspDI GGCGCC 1 cut(s) 833
SspMI CTAG 6 cut(s) 372, 584, 944, 1320, 1398, 1455
SstI GAGCTC 2 cut(s) 489, 1314
StyD4I CCNGG 4 cut(s) 212, 272, 457, 884
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 3 cut(s) 34, 982, 1127
TaiI ACGT 1 cut(s) 816
TasI AATT 6 cut(s) 11, 61, 73, 411, 877, 929
TatI WGTACW 2 cut(s) 222, 1414
TfiI GAWTC 2 cut(s) 1071, 1166
Tru1I TTAA 4 cut(s) 69, 87, 404, 642
Tru9I TTAA 4 cut(s) 69, 87, 404, 642
TscAI CASTG 5 cut(s) 128, 205, 332, 993, 1195
TseFI GTSAC 3 cut(s) 237, 716, 935
TseI GCWGC 3 cut(s) 203, 340, 478
Tsp45I GTSAC 3 cut(s) 237, 716, 935
TspGWI ACGGA 2 cut(s) 73, 436
TspRI CASTG 5 cut(s) 128, 205, 332, 993, 1195
Vha464I CTTAAG 1 cut(s) 403
VneI GTGCAC 1 cut(s) 725
VpaK11BI GGWCC 2 cut(s) 1025, 1123
XapI RAATTY 3 cut(s) 11, 877, 929
XceI RCATGY 3 cut(s) 1099, 1390, 1493
XhoI CTCGAG 1 cut(s) 482
XmnI GAANNNNTTC 2 cut(s) 21, 705
XspI CTAG 6 cut(s) 372, 584, 944, 1320, 1398, 1455
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.