Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001924.1

Orthogroup ID

OG0015275

Physical Location & Seq

Genomic Coordinates Forward (+)

64652 .. 68013

Gene Structure 3362 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001924.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

atgatcagaagacgactccggctgagctactcttccgacgaagaagagaccgtgactcacccacccctcacccaatcccgtccgaacccttacccctcggaaccactcccaatctcctcctcctccgacgagttcatcgacgtctccgacaacctctcgccgccgtctcctcagtttccggaatccgataatccaccggcgcctccaccgagctccggcggttgtccagttagcgactttctccagggacttggcttaaggctgaagcgggagtggttggatgcttgcgttttggggctgccgggctttcgaaacctggacgcggcggcgaaggccaagctctgcttcgagcagttcttggtttcggatatgaatctctccggcggtggcgtgcttcctcagaacgtggcctctcttcatctagttgatcttccaggaccttatgtgttgcaggttgatgagattgttaacattagcaatcctttgaagattaggtatcagaaagcctctgctggacacaaaaggtgcctcaagctgtcgatgaccgacggtgttcaacgtgttttcggtatggaatacaggcccattcaggcccttgaagctttggctcctgctggattgaaggttgttgtgtgcaatgtacatgttcgccatggacttcttatgctggtccctcaatcaattcaagttctaggaggattagtcgaagagctggatgcggcacggaaaagggttgttgatgaggtgaataagccaccaaggggaaacagaactaggaatggagtagttcctcctctagtgaatagggcagcccttgctgcctggcctcctgttggtgttcatgttgctggacaggctactagttccacattcgaagcgccaactccccttcatgcgtctaaccgagatgctggtagaaatagcattccaatgactacccaagagactgttcctctaggtagagaacatgctgtttatcatccatcatctaatatcgatgaagagatgcctatggattctattcccaatagcagagaaaatgctgtgcctaacccatcttcttatggttttggtgttgagagactccatataaacaccgttccttataggagggagaatccggtgcctaatactgccattcctaacccacccaacccaccctttgaggatgctttggatattgaagaggacattgatatggatgctgttgctattagcagtgaaactcgtggggctcgcccgtcaattttgaatgatgatgatatccatctggttaatgaagatgaaactcgtgtgccctacccatcctcggatgctattttcagtgacgaggataccaatgtcgtgaatgaggtggagcacccactcctactgtttggagagcgagagccccctttcatttacctatctagtttgtcgatcaggttagagaccagtaatgttcaatctgtacgagggaaggttaagtgttttttgactggtgtcaaggctttccaatataaccagaaatatgatctccgggcatacattgatgacggcggtatgatatccgagattctcattgatcacaatgttgtacagaagaggattggccattctcccgaggatgtcacagccggtctttcttccccagataaggctgtagtttccaaaatgaaggagaatatgaagcagttccaagttttcttagcaaattttgaggggataatgctcatagagataagtaaaggctctcctccagttgcccttgagatggatcagggctgtccttcgtctgatgcatggctgcttttgaggagactaaaggactcccctccggcccagacatcacaaagtcgctcctcgcgcctggctcaaaggtcacagagtctctcctcccgtcccattgatatatcgccataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0034641 GO:0035825 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0046483 GO:0048285 GO:0051304 GO:0051307 GO:0051321 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

RMI1_C RMI1_N

Protein Analysis

633

Amino Acids

69.4

Weight (kDa)

5.33

Isoelectric Point (pI)

61.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63540 AT5G63540
fragaria_vesca	FvH4_1g26610
malus_domestica	MD14G1152700.v1.1
prunus_persica	Prupe.5G147700_v2.0.a1
pyrus_communis	pycom14g12710
rosa_chinensis	RchiOBHm_Chr7g0189541
rosa_laevigata	RLG00000004602
rosa_multiflora	Rmu_sc0001924.1_g000011
rosa_roxburghii	Rroxscaffold_3G00265320
rosa_rugosa	Rorug06G0498900
rosa_samantha	Rh7AG103800 Rh7BG106500 Rh7CG108600 Rh7DG105900
rosa_wichuraiana	Rw7G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	144
Acc36I	ACCTGC	1 cut(s)	442
AccB1I	GGYRCC	3 cut(s)	199, 525, 1123
AccII	CGCG	2 cut(s)	323, 1846
AccIII	TCCGGA	1 cut(s)	178
AciI	CCGC	8 cut(s)	161, 219, 268, 323, 326, 384, 719, 1539
AclWI	GGATC	1 cut(s)	1764
AcoI	YGGCCR	1 cut(s)	1591
AcsI	RAATTY	1 cut(s)	1693
AcuI	CTGAAG	1 cut(s)	284
AcyI	GRCGYC	2 cut(s)	141, 200
AfaI	GTAC	3 cut(s)	642, 1452, 1578
AfiI	CCNNNNNNNGG	7 cut(s)	215, 322, 761, 833, 1309, 1636, 1753
AflII	CTTAAG	1 cut(s)	256
AflIII	ACRYGT	2 cut(s)	559, 643
AgsI	TTSAA	8 cut(s)	487, 557, 599, 622, 686, 1184, 1252, 1445
AhlI	ACTAGT	1 cut(s)	860
AjnI	CCWGG	5 cut(s)	243, 315, 433, 821, 1848
AjuI	GAANNNNNNNTTGG	4 cut(s)	329, 361, 933, 965
AluBI	AGCT	6 cut(s)	27, 213, 340, 535, 602, 712
AluI	AGCT	6 cut(s)	27, 213, 340, 535, 602, 712
Alw21I	GWGCWC	2 cut(s)	215, 1362
Alw26I	GTCTC	8 cut(s)	41, 148, 171, 938, 1075, 1424, 1792, 1874
AlwI	GGATC	1 cut(s)	1764
Ama87I	CYCGRG	1 cut(s)	1601
Aor13HI	TCCGGA	1 cut(s)	178
AoxI	GGCC	7 cut(s)	333, 408, 581, 591, 824, 1591, 1818
ApeKI	GCWGC	4 cut(s)	298, 809, 818, 1786
ApoI	RAATTY	1 cut(s)	1693
Asp700I	GAANNNNTTC	1 cut(s)	1673
AspLEI	GCGC	3 cut(s)	202, 880, 1848
AspS9I	GGNCC	5 cut(s)	437, 582, 592, 670, 1819
AsuC2I	CCSGG	2 cut(s)	303, 1520
AsuHPI	GGTGA	3 cut(s)	50, 61, 757
AsuII	TTCGAA	2 cut(s)	310, 873
AvaI	CYCGRG	1 cut(s)	1601
AvaII	GGWCC	2 cut(s)	437, 670
BaeGI	GKGCMC	1 cut(s)	1299
BaeI	ACNNNNGTAYC	2 cut(s)	1326, 1359
BalI	TGGCCA	1 cut(s)	1593
BanI	GGYRCC	3 cut(s)	199, 525, 1123
BanII	GRGCYC	3 cut(s)	215, 1237, 1392
BauI	CACGAG	2 cut(s)	1227, 1290
BbsI	GAAGAC	1 cut(s)	16
Bbv12I	GWGCWC	2 cut(s)	215, 1362
BbvI	GCAGC	4 cut(s)	285, 805, 821, 1773
BccI	CCATC	5 cut(s)	991, 1063, 1275, 1312, 1747
BceAI	ACGGC	2 cut(s)	148, 1552
BciT130I	CCWGG	5 cut(s)	245, 317, 435, 823, 1850
BciVI	GTATCC	1 cut(s)	1327
BclI	TGATCA	2 cut(s)	3, 1564
BcnI	CCSGG	2 cut(s)	303, 1520
BcoDI	GTCTC	8 cut(s)	41, 148, 171, 938, 1075, 1424, 1792, 1874
BcuI	ACTAGT	1 cut(s)	860
BfaI	CTAG	7 cut(s)	422, 692, 774, 797, 861, 956, 1410
BfmI	CTRYAG	1 cut(s)	1641
BfoI	RGCGCY	2 cut(s)	203, 881
BfrI	CTTAAG	1 cut(s)	256
BfuAI	ACCTGC	1 cut(s)	442
BfuI	GTATCC	1 cut(s)	1327
BisI	GCNGC	8 cut(s)	161, 299, 324, 327, 720, 810, 819, 1787
BlpI	GCTNAGC	1 cut(s)	23
BlsI	GCNGC	8 cut(s)	162, 300, 325, 328, 721, 811, 820, 1788
Bme1390I	CCNGG	7 cut(s)	245, 303, 317, 435, 823, 1520, 1850
Bme18I	GGWCC	2 cut(s)	437, 670
BmeT110I	CYCGRG	1 cut(s)	1601
BmgT120I	GGNCC	5 cut(s)	437, 582, 592, 670, 1819
BmiI	GGNNCC	6 cut(s)	102, 201, 527, 609, 672, 1125
BmrFI	CCNGG	7 cut(s)	245, 303, 317, 435, 823, 1520, 1850
BmsI	GCATC	8 cut(s)	271, 706, 898, 996, 1159, 1192, 1303, 1768
BoxI	GACNNNNGTC	1 cut(s)	1481
BpiI	GAAGAC	1 cut(s)	16
BpmI	CTGGAG	2 cut(s)	227, 1722
Bpu1102I	GCTNAGC	1 cut(s)	23
Bpu14I	TTCGAA	2 cut(s)	310, 873
BpuEI	CTTGAG	2 cut(s)	515, 1769
BpuMI	CCSGG	2 cut(s)	303, 1520
Bsa29I	ATCGAT	1 cut(s)	996
BsaBI	GATNNNNATC	2 cut(s)	372, 1266
BsaHI	GRCGYC	2 cut(s)	141, 200
BsaI	GGTCTC	2 cut(s)	41, 1424
BsaJI	CCNNGG	6 cut(s)	96, 244, 652, 758, 1308, 1602
BsaWI	WCCGGW	2 cut(s)	178, 1120
BsaXI	ACNNNNNCTCC	2 cut(s)	687, 717
Bsc4I	CCNNNNNNNGG	7 cut(s)	215, 322, 761, 833, 1309, 1636, 1753
Bse118I	RCCGGY	2 cut(s)	196, 1616
Bse1I	ACTGG	4 cut(s)	227, 1434, 1483, 1739
Bse3DI	GCAATG	1 cut(s)	643
Bse8I	GATNNNNATC	2 cut(s)	372, 1266
BseAI	TCCGGA	1 cut(s)	178
BseBI	CCWGG	5 cut(s)	245, 317, 435, 823, 1850
BseCI	ATCGAT	1 cut(s)	996
BseDI	CCNNGG	6 cut(s)	96, 244, 652, 758, 1308, 1602
BseGI	GGATG	8 cut(s)	286, 721, 979, 1174, 1207, 1304, 1318, 1612
BseJI	GATNNNNATC	2 cut(s)	372, 1266
BseLI	CCNNNNNNNGG	7 cut(s)	215, 322, 761, 833, 1309, 1636, 1753
BseMI	GCAATG	1 cut(s)	643
BseMII	CTCAG	3 cut(s)	14, 185, 413
BseNI	ACTGG	4 cut(s)	227, 1434, 1483, 1739
BseRI	GAGGAG	9 cut(s)	106, 109, 112, 159, 783, 1725, 1810, 1831, 1864
BseSI	GKGCMC	1 cut(s)	1299
BseXI	GCAGC	4 cut(s)	285, 805, 821, 1773
Bsh1236I	CGCG	2 cut(s)	323, 1846
BshFI	GGCC	7 cut(s)	335, 410, 583, 593, 826, 1593, 1820
BshNI	GGYRCC	3 cut(s)	199, 525, 1123
BshVI	ATCGAT	1 cut(s)	996
BsiHKAI	GWGCWC	2 cut(s)	215, 1362
BsiHKCI	CYCGRG	1 cut(s)	1601
BslFI	GGGAC	3 cut(s)	261, 656, 1866
BslI	CCNNNNNNNGG	7 cut(s)	215, 322, 761, 833, 1309, 1636, 1753
BsmAI	GTCTC	8 cut(s)	41, 148, 171, 938, 1075, 1424, 1792, 1874
BsmBI	CGTCTC	2 cut(s)	148, 171
BsmFI	GGGAC	3 cut(s)	261, 656, 1866
BsmI	GAATGC	1 cut(s)	924
BsnI	GGCC	7 cut(s)	335, 410, 583, 593, 826, 1593, 1820
Bso31I	GGTCTC	2 cut(s)	41, 1424
BsoBI	CYCGRG	1 cut(s)	1601
Bsp119I	TTCGAA	2 cut(s)	310, 873
Bsp1286I	GDGCHC	5 cut(s)	215, 1237, 1299, 1362, 1392
Bsp13I	TCCGGA	1 cut(s)	178
Bsp1407I	TGTACA	2 cut(s)	640, 1576
Bsp143I	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
Bsp1720I	GCTNAGC	1 cut(s)	23
Bsp19I	CCATGG	1 cut(s)	652
BspACI	CCGC	8 cut(s)	161, 219, 268, 323, 326, 384, 719, 1539
BspANI	GGCC	7 cut(s)	335, 410, 583, 593, 826, 1593, 1820
BspCNI	CTCAG	3 cut(s)	15, 184, 412
BspDI	ATCGAT	1 cut(s)	996
BspEI	TCCGGA	1 cut(s)	178
BspFNI	CGCG	2 cut(s)	323, 1846
BspLI	GGNNCC	6 cut(s)	102, 201, 527, 609, 672, 1125
BspMI	ACCTGC	1 cut(s)	442
BspPI	GGATC	1 cut(s)	1764
BspQI	GCTCTTC	1 cut(s)	702
BspT104I	TTCGAA	2 cut(s)	310, 873
BspT107I	GGYRCC	3 cut(s)	199, 525, 1123
BspTI	CTTAAG	1 cut(s)	256
BspTNI	GGTCTC	2 cut(s)	41, 1424
BsrDI	GCAATG	1 cut(s)	643
BsrFI	RCCGGY	2 cut(s)	196, 1616
BsrGI	TGTACA	2 cut(s)	640, 1576
BsrI	ACTGG	4 cut(s)	227, 1434, 1483, 1739
BssAI	RCCGGY	2 cut(s)	196, 1616
BssECI	CCNNGG	6 cut(s)	96, 244, 652, 758, 1308, 1602
BssMI	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
BssNI	GRCGYC	2 cut(s)	141, 200
BssSI	CACGAG	2 cut(s)	1227, 1290
BssT1I	CCWWGG	2 cut(s)	652, 758
Bst2BI	CACGAG	2 cut(s)	1227, 1290
Bst2UI	CCWGG	5 cut(s)	245, 317, 435, 823, 1850
Bst4CI	ACNGT	5 cut(s)	52, 551, 949, 1099, 1374
Bst6I	CTCTTC	7 cut(s)	37, 39, 420, 702, 996, 1179, 1577
BstACI	GRCGYC	2 cut(s)	141, 200
BstAFI	CTTAAG	1 cut(s)	256
BstAPI	GCANNNNNTGC	1 cut(s)	815
BstAUI	TGTACA	2 cut(s)	640, 1576
BstBI	TTCGAA	2 cut(s)	310, 873
BstC8I	GCNNGC	3 cut(s)	286, 392, 1237
BstDEI	CTNAG	4 cut(s)	23, 171, 399, 1687
BstDSI	CCRYGG	1 cut(s)	652
BstF5I	GGATG	8 cut(s)	286, 721, 979, 1174, 1207, 1304, 1318, 1612
BstFNI	CGCG	2 cut(s)	323, 1846
BstH2I	RGCGCY	2 cut(s)	203, 881
BstHHI	GCGC	3 cut(s)	202, 880, 1848
BstKTI	GATC	6 cut(s)	6, 430, 1422, 1516, 1567, 1759
BstMAI	GTCTC	8 cut(s)	41, 148, 171, 938, 1075, 1424, 1792, 1874
BstMBI	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
BstMWI	GCNNNNNNNGC	6 cut(s)	332, 599, 815, 818, 854, 1845
BstNI	CCWGG	5 cut(s)	245, 317, 435, 823, 1850
BstNSI	RCATGY	2 cut(s)	647, 971
BstPAI	GACNNNNGTC	1 cut(s)	1481
BstSCI	CCNGG	7 cut(s)	243, 301, 315, 433, 821, 1518, 1848
BstSFI	CTRYAG	1 cut(s)	1641
BstSLI	GKGCMC	1 cut(s)	1299
BstUI	CGCG	2 cut(s)	323, 1846
BstV1I	GCAGC	4 cut(s)	285, 805, 821, 1773
BstV2I	GAAGAC	1 cut(s)	16
BstXI	CCANNNNNNTGG	1 cut(s)	251
Bsu15I	ATCGAT	1 cut(s)	996
BsuI	GTATCC	1 cut(s)	1327
BsuRI	GGCC	7 cut(s)	335, 410, 583, 593, 826, 1593, 1820
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	1 cut(s)	652
BtsCI	GGATG	8 cut(s)	286, 721, 979, 1174, 1207, 1304, 1318, 1612
BtsI	GCAGTG	1 cut(s)	1225
BtsIMutI	CAGTG	2 cut(s)	1225, 1330
BveI	ACCTGC	1 cut(s)	442
Cac8I	GCNNGC	3 cut(s)	286, 392, 1237
CfoI	GCGC	3 cut(s)	202, 880, 1848
Cfr10I	RCCGGY	2 cut(s)	196, 1616
Cfr13I	GGNCC	5 cut(s)	437, 582, 592, 670, 1819
ClaI	ATCGAT	1 cut(s)	996
CseI	GACGC	2 cut(s)	329, 885
Csp6I	GTAC	3 cut(s)	641, 1451, 1577
CviAII	CATG	6 cut(s)	644, 653, 842, 893, 968, 1782
CviQI	GTAC	3 cut(s)	641, 1451, 1577
DdeI	CTNAG	4 cut(s)	23, 171, 399, 1687
DinI	GGCGCC	1 cut(s)	201
DpnI	GATC	6 cut(s)	5, 429, 1421, 1515, 1566, 1758
DpnII	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
EaeI	YGGCCR	1 cut(s)	1591
Eam1104I	CTCTTC	7 cut(s)	37, 39, 420, 702, 996, 1179, 1577
EarI	CTCTTC	7 cut(s)	37, 39, 420, 702, 996, 1179, 1577
Ecl136II	GAGCTC	1 cut(s)	213
Eco130I	CCWWGG	2 cut(s)	652, 758
Eco24I	GRGCYC	3 cut(s)	215, 1237, 1392
Eco31I	GGTCTC	2 cut(s)	41, 1424
Eco32I	GATATC	2 cut(s)	1264, 1548
Eco47I	GGWCC	2 cut(s)	437, 670
Eco53kI	GAGCTC	1 cut(s)	213
Eco57I	CTGAAG	1 cut(s)	284
Eco88I	CYCGRG	1 cut(s)	1601
EcoICRI	GAGCTC	1 cut(s)	213
EcoO109I	RGGNCCY	2 cut(s)	437, 592
EcoRII	CCWGG	5 cut(s)	243, 315, 433, 821, 1848
EcoRV	GATATC	2 cut(s)	1264, 1548
EcoT14I	CCWWGG	2 cut(s)	652, 758
EcoT22I	ATGCAT	1 cut(s)	1783
EcoT38I	GRGCYC	3 cut(s)	215, 1237, 1392
EgeI	GGCGCC	1 cut(s)	201
EheI	GGCGCC	1 cut(s)	201
ErhI	CCWWGG	2 cut(s)	652, 758
Esp3I	CGTCTC	2 cut(s)	148, 171
FaeI	CATG	6 cut(s)	647, 656, 845, 896, 971, 1785
FalI	AAGNNNNNCTT	2 cut(s)	329, 361
FaqI	GGGAC	3 cut(s)	261, 656, 1866
FatI	CATG	6 cut(s)	643, 652, 841, 892, 967, 1781
FauI	CCCGC	1 cut(s)	261
FbaI	TGATCA	2 cut(s)	3, 1564
Fnu4HI	GCNGC	8 cut(s)	161, 299, 324, 327, 720, 810, 819, 1787
FokI	GGATG	8 cut(s)	293, 728, 966, 1181, 1214, 1291, 1325, 1619
FriOI	GRGCYC	3 cut(s)	215, 1237, 1392
Fsp4HI	GCNGC	8 cut(s)	161, 299, 324, 327, 720, 810, 819, 1787
FspBI	CTAG	7 cut(s)	422, 692, 774, 797, 861, 956, 1410
GlaI	GCGC	3 cut(s)	201, 879, 1847
GluI	GCNGC	8 cut(s)	161, 299, 324, 327, 720, 810, 819, 1787
GsuI	CTGGAG	2 cut(s)	227, 1722
HaeII	RGCGCY	2 cut(s)	203, 881
HaeIII	GGCC	7 cut(s)	335, 410, 583, 593, 826, 1593, 1820
HgaI	GACGC	2 cut(s)	329, 885
HhaI	GCGC	3 cut(s)	202, 880, 1848
Hin1I	GRCGYC	2 cut(s)	141, 200
Hin1II	CATG	6 cut(s)	647, 656, 845, 896, 971, 1785
Hin6I	GCGC	3 cut(s)	200, 878, 1846
HinP1I	GCGC	3 cut(s)	200, 878, 1846
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	1 cut(s)	600
HpaI	GTTAAC	1 cut(s)	469
HphI	GGTGA	3 cut(s)	50, 61, 757
Hpy166II	GTNNAC	1 cut(s)	469
Hpy188III	TCNNGA	3 cut(s)	179, 1345, 1601
Hpy8I	GTNNAC	1 cut(s)	469
Hpy99I	CGWCG	4 cut(s)	41, 131, 143, 551
HpyAV	CCTTC	6 cut(s)	325, 616, 899, 1453, 1651, 1779
HpyCH4III	ACNGT	5 cut(s)	52, 551, 949, 1099, 1374
HpyCH4IV	ACGT	3 cut(s)	141, 405, 559
HpyCH4V	TGCA	3 cut(s)	451, 636, 1781
HpyF10VI	GCNNNNNNNGC	6 cut(s)	332, 599, 815, 818, 854, 1845
HpyF3I	CTNAG	4 cut(s)	23, 171, 399, 1687
HpySE526I	ACGT	3 cut(s)	141, 405, 559
Hsp92I	GRCGYC	2 cut(s)	141, 200
Hsp92II	CATG	6 cut(s)	647, 656, 845, 896, 971, 1785
HspAI	GCGC	3 cut(s)	200, 878, 1846
KasI	GGCGCC	1 cut(s)	199
Kpn2I	TCCGGA	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	3, 1564
KspAI	GTTAAC	1 cut(s)	469
Kzo9I	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
LguI	GCTCTTC	1 cut(s)	702
LmnI	GCTCC	4 cut(s)	218, 613, 1357, 1844
Lsp1109I	GCAGC	4 cut(s)	285, 805, 821, 1773
LweI	GCATC	8 cut(s)	271, 706, 898, 996, 1159, 1192, 1303, 1768
MaeI	CTAG	7 cut(s)	422, 692, 774, 797, 861, 956, 1410
MaeII	ACGT	3 cut(s)	141, 405, 559
MaeIII	GTNAC	4 cut(s)	52, 1325, 1609, 1860
MalI	GATC	6 cut(s)	5, 429, 1421, 1515, 1566, 1758
MboI	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
MhlI	GDGCHC	5 cut(s)	215, 1237, 1299, 1362, 1392
MlsI	TGGCCA	1 cut(s)	1593
MluCI	AATT	3 cut(s)	681, 1245, 1693
MluNI	TGGCCA	1 cut(s)	1593
Mly113I	GGCGCC	1 cut(s)	200
MlyI	GAGTC	5 cut(s)	9, 49, 1077, 1802, 1876
MmeI	TCCRAC	4 cut(s)	60, 150, 171, 258
Mox20I	TGGCCA	1 cut(s)	1593
Mph1103I	ATGCAT	1 cut(s)	1783
MroI	TCCGGA	1 cut(s)	178
MroXI	GAANNNNTTC	1 cut(s)	1673
MscI	TGGCCA	1 cut(s)	1593
MseI	TTAA	4 cut(s)	257, 468, 1275, 1464
MslI	CAYNNNNRTG	2 cut(s)	929, 1196
Msp20I	TGGCCA	1 cut(s)	1593
MspCI	CTTAAG	1 cut(s)	256
MspR9I	CCNGG	7 cut(s)	245, 303, 317, 435, 823, 1520, 1850
Mva1269I	GAATGC	1 cut(s)	924
MvaI	CCWGG	5 cut(s)	245, 317, 435, 823, 1850
MvnI	CGCG	2 cut(s)	323, 1846
MwoI	GCNNNNNNNGC	6 cut(s)	332, 599, 815, 818, 854, 1845
NarI	GGCGCC	1 cut(s)	200
NciI	CCSGG	2 cut(s)	303, 1520
NcoI	CCATGG	1 cut(s)	652
NdeII	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
NlaIII	CATG	6 cut(s)	647, 656, 845, 896, 971, 1785
NlaIV	GGNNCC	6 cut(s)	102, 201, 527, 609, 672, 1125
NmuCI	GTSAC	4 cut(s)	52, 1325, 1609, 1860
NsiI	ATGCAT	1 cut(s)	1783
NspI	RCATGY	2 cut(s)	647, 971
NspV	TTCGAA	2 cut(s)	310, 873
PciI	ACATGT	1 cut(s)	643
PciSI	GCTCTTC	1 cut(s)	702
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 144
PctI	GAATGC	1 cut(s)	924
PdmI	GAANNNNTTC	1 cut(s)	1673
PfeI	GAWTC	5 cut(s)	182, 373, 1016, 1117, 1555
PfoI	TCCNGGA	1 cut(s)	433
PkrI	GCNGC	8 cut(s)	162, 300, 325, 328, 721, 811, 820, 1788
PleI	GAGTC	5 cut(s)	9, 49, 1077, 1802, 1875
PluTI	GGCGCC	1 cut(s)	203
PpsI	GAGTC	5 cut(s)	9, 49, 1077, 1802, 1875
PpuMI	RGGWCCY	1 cut(s)	437
PscI	ACATGT	1 cut(s)	643
PshAI	GACNNNNGTC	1 cut(s)	1481
Psp124BI	GAGCTC	1 cut(s)	215
Psp5II	RGGWCCY	1 cut(s)	437
Psp6I	CCWGG	5 cut(s)	243, 315, 433, 821, 1848
PspGI	CCWGG	5 cut(s)	243, 315, 433, 821, 1848
PspN4I	GGNNCC	6 cut(s)	102, 201, 527, 609, 672, 1125
PspPI	GGNCC	5 cut(s)	437, 582, 592, 670, 1819
PspPPI	RGGWCCY	1 cut(s)	437
RsaI	GTAC	3 cut(s)	642, 1452, 1578
RsaNI	GTAC	3 cut(s)	641, 1451, 1577
RseI	CAYNNNNRTG	2 cut(s)	929, 1196
SacI	GAGCTC	1 cut(s)	215
SapI	GCTCTTC	1 cut(s)	702
SaqAI	TTAA	4 cut(s)	257, 468, 1275, 1464
SatI	GCNGC	8 cut(s)	161, 299, 324, 327, 720, 810, 819, 1787
Sau3AI	GATC	6 cut(s)	3, 427, 1419, 1513, 1564, 1756
Sau96I	GGNCC	5 cut(s)	437, 582, 592, 670, 1819
SchI	GAGTC	5 cut(s)	9, 49, 1077, 1802, 1876
ScrFI	CCNGG	7 cut(s)	245, 303, 317, 435, 823, 1520, 1850
SduI	GDGCHC	5 cut(s)	215, 1237, 1299, 1362, 1392
SfaNI	GCATC	8 cut(s)	271, 706, 898, 996, 1159, 1192, 1303, 1768
SfcI	CTRYAG	1 cut(s)	1641
SfoI	GGCGCC	1 cut(s)	201
SfuI	TTCGAA	2 cut(s)	310, 873
SgrAI	CRCCGGYG	1 cut(s)	196
SinI	GGWCC	2 cut(s)	437, 670
SmiMI	CAYNNNNRTG	2 cut(s)	929, 1196
SmlI	CTYRAG	3 cut(s)	256, 530, 1748
SmoI	CTYRAG	3 cut(s)	256, 530, 1748
SpeI	ACTAGT	1 cut(s)	860
Sse9I	AATT	3 cut(s)	681, 1245, 1693
SsiI	CCGC	8 cut(s)	161, 219, 268, 323, 326, 384, 719, 1539
SspDI	GGCGCC	1 cut(s)	199
SspMI	CTAG	7 cut(s)	422, 692, 774, 797, 861, 956, 1410
SstI	GAGCTC	1 cut(s)	215
StyD4I	CCNGG	7 cut(s)	243, 301, 315, 433, 821, 1518, 1848
StyI	CCWWGG	2 cut(s)	652, 758
TaaI	ACNGT	5 cut(s)	52, 551, 949, 1099, 1374
TaiI	ACGT	3 cut(s)	144, 408, 562
TaqI	TCGA	8 cut(s)	138, 310, 348, 539, 705, 873, 996, 1418
TaqII	GACCGA	1 cut(s)	560
TasI	AATT	3 cut(s)	681, 1245, 1693
TatI	WGTACW	2 cut(s)	640, 1576
TauI	GCSGC	4 cut(s)	163, 326, 329, 722
TfiI	GAWTC	5 cut(s)	182, 373, 1016, 1117, 1555
Tru1I	TTAA	4 cut(s)	257, 468, 1275, 1464
Tru9I	TTAA	4 cut(s)	257, 468, 1275, 1464
TscAI	CASTG	2 cut(s)	1225, 1330
TseFI	GTSAC	4 cut(s)	52, 1325, 1609, 1860
TseI	GCWGC	4 cut(s)	298, 809, 818, 1786
Tsp45I	GTSAC	4 cut(s)	52, 1325, 1609, 1860
TspGWI	ACGGA	1 cut(s)	739
TspRI	CASTG	2 cut(s)	1225, 1330
Vha464I	CTTAAG	1 cut(s)	256
VpaK11BI	GGWCC	2 cut(s)	437, 670
XapI	RAATTY	1 cut(s)	1693
XceI	RCATGY	2 cut(s)	647, 971
XmnI	GAANNNNTTC	1 cut(s)	1673
XspI	CTAG	7 cut(s)	422, 692, 774, 797, 861, 956, 1410
ZraI	GACGTC	1 cut(s)	142
Zsp2I	ATGCAT	1 cut(s)	1783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.