Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0015275

Physical Location & Seq

Genomic Coordinates Reverse (-)

58728085 .. 58736848

Gene Structure 8764 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00265320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGATTAGACCGAAGAAGGCAATTAGGAGGAGGGTGATATTATACAGTTTTTTTTCGGGTGGCAATGACGGTTTTGGTACCTGGGGTGAGGCCAGGACTACGGTTAAGGTTGAGGAAGGAGTCCCAAATGCGGTCCGAGTGGGTGCAAATCCAAGTGATTCTAAGCCCCTTTCGGCCACACCTACGGTAGTGGACAGTGGGGGTGGAAGTGCAAGTAGAATTACATTGCCTCCATTGGCATCGTACTCGAATGTTTTTGGTGATTTGAGGAAAGAGAGTTTGGTTTGTGGTAATTGTGGCGGACATTGTGATTCTGGACACTACAAGTATAACAAGGGTGATTTTCTACTTTGCACAAAGTGTTTTGAAAATGGAAACTATGGGGAGAACAAATTGAAGGAAGATTTCAAGTACAACGAGCCAGTTGAAAAGAGTAGTAATATTGGACTTGAGTGGACTGAATCAGAAACTTTACTTCTTTTAGATTCAGTTGCGAAGCATGGAGATGATTGGGATCGTGTTGCTCAAAATGTTAAGACCAAGACCAAAGTTGATTGTATTGCTAAGCTTATTGACTTGCCTTTTGGGGAGGTTGTGTTGGGTTCTGGTCACAGAAAAGGTAACCATAGTGGCTTTAGTGGCAACTTGAGCGGTTCAAAACAAGGTCAGTTATCTTCATCTGAGTGTCAAGAGACTATCAAAACCAAGAGTCAGAGCCATGAGCAGACAAATGACAGTGAGCAGAATGGAGATACTGCAAACCAAGGTCCCCCTTTGAAAAAACAACGCGTCGCTTCCCTTTCGGATGCTAGTAGTTCACTGATTACGCAGTTATATGCTTTTGTACAATCGTCTATTCTCATACCCGACTATGGTCTTATCAACTCGTTACATATACTGTTAAACGGGTCAGGGTGCCAGCTGCTGCTCGGGTTGCTAGCCATCTGTATTCTCTCGCTATCTCAATCCGTGCCGGGCTTTCGAAACCTCGACGCGGCGGCGAAGGCCAAGCTCTGCTTCGAGCAGTTCTTGGTTTCGGATATGAATCTCTCCGGCGGTGGCGTGCTTCCTCAGAACGTGGCCTCTCTTCATCTAGTTGATCTTCCAGGACCTTATGTGTTGCAGGTTGATGAGATTGTTAACATTAGCAATCCTTTGAAGATTAGGTATCAGAAAGCCTCTGCTGGACACAAAAGGTGCCTCAAGCTGTCGATGACCGACGGTGTTCAACGTGTTTTCGGTATGGAATACAGGCCCATTCAGGCCTTTGAAGCTTTGGCTCCTGCTGGATTGAAGGTTGTTGTGTGCAATGTACATATACGCCATGGACTTCTTATGCTGGTCCCTCAATCAACTGAAGTTCTAGGAGGATTAGTCGAAGAGCTGGATGCGGCACGGAAAAGGCTTGTTGATGAGGTGAATAAGCCACCAAGGGGAAACAGAACTAGGAATGGAGTAGTTCCTCCTCTAGCAAATAGGGCAGCCCTGGCTGCCTGGCCTCGTGATGGTGTTCATGTTGCTGGACAGGCTAATAGTTCCACATTCAGAGCGCCCACTCCCCTTCATGTGTCTAACCGAGATGCAGGTAGAAATAGCATTCCAATGACTACCCAAGAGACTGTTCCTCTACGTAGAGAACATGCTGTTTATCATCCATCATCTAATATCGGTGAAGAGATGCCTATGGATTCTATTCCCAATAGCAGAGAAAATGCTGGGCCTAACCCATCTTCTTATGGTTTTGGTGTTGAGAGACTCCATATAAACACTGTTCCTTATAGGAGGGAGAATCCGGTGCCTAATACTGCCATTCCTAACCCACCCAACCCACCCTTTGAGGATGCTTTGGATATTGAAGAGGACATTGATATGGATGCTGTTTCTATTAGCAGTGAAACTCATGGGGCTCGCCCGTCAATTTTGAATGATGATGATATCCATCTGGTTAATGAGGATGAAACTCGTAGCGAGAGACCCCCTTTCATTTACCTATCCAGTTTGTGGATCAGGTTCGAGACCAGTAACGTTCAATCTGTACGGGGAAAGGTTAAGTGTTTTTTGACTGGTGTCAAGGCTTTCCAATATAAGCAGAAATATGATCTCCGGGCATACATTGATGACGGCGGTATGATATCCGAGATTCTCATTGATCACAACGTTGTACAGAAGAGGATTGGCCATTCTCCCGAGGATGTCCGAGCCGGTCTTTCTTCCCCAGATAAGGCTGTAGTTTCCAAAATGAAGGAGAATATGAAGCAGTTCCAAGTTTTCTTAGCAAATTTCGAGGGGATAATACTCATAGAGATAAGTAAAGGCTCTCTTCCAGTTGCCCTTGAGATGGATCAGGGCTGTCCTTCGTCTGATGCATGGTTGCTTTTGAGGAGACTAAAGGGCTCCCCCTCCGGCTCAGACATCACAAAGTCGCTCCTCGCGCCTGGCTCAAAGGTCACAGAGTCTCTCCTCCCGCCCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0034641 GO:0035825 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0046483 GO:0048285 GO:0051304 GO:0051307 GO:0051321 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

RMI1_C RMI1_N

Protein Analysis

824

Amino Acids

89.75

Weight (kDa)

6.74

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	151 - 189	5.5e-09	Myb-like DNA-binding domain
RMI1_N_C	PF08585	356 - 467	2.9e-24	RMI1, N-terminal OB-fold domain
RMI1_C	PF16099	659 - 796	2.2e-30	Recq-mediated genome instability protein 1, C-terminal OB-fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63540 AT5G63540
fragaria_vesca	FvH4_1g26610
malus_domestica	MD14G1152700.v1.1
prunus_persica	Prupe.5G147700_v2.0.a1
pyrus_communis	pycom14g12710
rosa_chinensis	RchiOBHm_Chr7g0189541
rosa_laevigata	RLG00000004602
rosa_multiflora	Rmu_sc0001924.1_g000011
rosa_roxburghii	Rroxscaffold_3G00265320
rosa_rugosa	Rorug06G0498900
rosa_samantha	Rh7AG103800 Rh7BG106500 Rh7CG108600 Rh7DG105900
rosa_wichuraiana	Rw7G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1114, 1574
Acc65I	GGTACC	1 cut(s)	77
AccB1I	GGYRCC	4 cut(s)	77, 915, 1197, 1795
AccB7I	CCANNNNNTGG	1 cut(s)	2001
AccBSI	CCGCTC	1 cut(s)	651
AccII	CGCG	3 cut(s)	789, 995, 2432
AciI	CCGC	9 cut(s)	131, 300, 651, 995, 998, 1056, 1391, 2124, 2465
AclI	AACGTT	2 cut(s)	2025, 2157
AclWI	GGATC	3 cut(s)	522, 2012, 2349
AcoI	YGGCCR	2 cut(s)	174, 2176
AcsI	RAATTY	1 cut(s)	2278
AcuI	CTGAAG	1 cut(s)	1377
AdeI	CACNNNGTG	1 cut(s)	360
AfaI	GTAC	7 cut(s)	79, 245, 413, 846, 1314, 2037, 2163
AfiI	CCNNNNNNNGG	8 cut(s)	130, 872, 994, 1433, 1505, 2001, 2221, 2338
AflIII	ACRYGT	2 cut(s)	787, 1231
AjnI	CCWGG	6 cut(s)	80, 92, 1105, 1485, 1493, 2434
AjuI	GAANNNNNNNTTGG	6 cut(s)	263, 295, 1001, 1033, 1605, 1637
AluBI	AGCT	6 cut(s)	568, 922, 1012, 1207, 1274, 1384
AluI	AGCT	6 cut(s)	568, 922, 1012, 1207, 1274, 1384
Alw26I	GTCTC	7 cut(s)	686, 1610, 1747, 1966, 2009, 2377, 2460
AlwI	GGATC	3 cut(s)	522, 2012, 2349
AlwNI	CAGNNNCTG	1 cut(s)	925
Ama87I	CYCGRG	2 cut(s)	929, 2186
AoxI	GGCC	9 cut(s)	90, 174, 1005, 1080, 1253, 1263, 1496, 1718, 2176
ApeKI	GCWGC	4 cut(s)	922, 925, 1481, 1490
ApoI	RAATTY	1 cut(s)	2278
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
Asp700I	GAANNNNTTC	1 cut(s)	2258
Asp718I	GGTACC	1 cut(s)	77
AspLEI	GCGC	2 cut(s)	1552, 2434
AspS9I	GGNCC	6 cut(s)	133, 767, 1109, 1254, 1342, 1718
AsuC2I	CCSGG	2 cut(s)	975, 2105
AsuHPI	GGTGA	6 cut(s)	46, 98, 272, 350, 1429, 1682
AsuII	TTCGAA	1 cut(s)	982
AsuNHI	GCTAGC	1 cut(s)	937
AvaI	CYCGRG	2 cut(s)	929, 2186
AvaII	GGWCC	4 cut(s)	133, 767, 1109, 1342
BalI	TGGCCA	1 cut(s)	2178
BanI	GGYRCC	4 cut(s)	77, 915, 1197, 1795
BanII	GRGCYC	2 cut(s)	1909, 2396
BauI	CACGAG	1 cut(s)	1500
BbvI	GCAGC	4 cut(s)	909, 912, 1477, 1493
BccI	CCATC	6 cut(s)	950, 1499, 1663, 1735, 1947, 2332
BceAI	ACGGC	1 cut(s)	2137
BcgI	CGANNNNNNTGC	2 cut(s)	228, 262
BciT130I	CCWGG	6 cut(s)	82, 94, 1107, 1487, 1495, 2436
BclI	TGATCA	1 cut(s)	2149
BcnI	CCSGG	2 cut(s)	975, 2105
BcoDI	GTCTC	7 cut(s)	686, 1610, 1747, 1966, 2009, 2377, 2460
BfaI	CTAG	6 cut(s)	810, 938, 1094, 1364, 1446, 1469
BfmI	CTRYAG	1 cut(s)	2226
BfoI	RGCGCY	1 cut(s)	1553
BfuAI	ACCTGC	2 cut(s)	1114, 1574
BisI	GCNGC	7 cut(s)	923, 926, 996, 999, 1392, 1482, 1491
BlpI	GCTNAGC	1 cut(s)	564
BlsI	GCNGC	7 cut(s)	924, 927, 997, 1000, 1393, 1483, 1492
Bme1390I	CCNGG	8 cut(s)	82, 94, 975, 1107, 1487, 1495, 2105, 2436
Bme18I	GGWCC	4 cut(s)	133, 767, 1109, 1342
BmeT110I	CYCGRG	2 cut(s)	929, 2186
BmgT120I	GGNCC	6 cut(s)	133, 767, 1109, 1254, 1342, 1718
BmiI	GGNNCC	8 cut(s)	79, 769, 917, 1199, 1281, 1344, 1797, 2395
BmrFI	CCNGG	8 cut(s)	82, 94, 975, 1107, 1487, 1495, 2105, 2436
BmsI	GCATC	8 cut(s)	248, 796, 1378, 1570, 1668, 1831, 1864, 2353
BmtI	GCTAGC	1 cut(s)	941
BoxI	GACNNNNGTC	2 cut(s)	873, 2066
Bpu1102I	GCTNAGC	1 cut(s)	564
Bpu14I	TTCGAA	1 cut(s)	982
BpuEI	CTTGAG	4 cut(s)	470, 667, 1187, 2354
BpuMI	CCSGG	2 cut(s)	975, 2105
BsaAI	YACGTR	1 cut(s)	1631
BsaBI	GATNNNNATC	3 cut(s)	513, 1044, 1938
BsaI	GGTCTC	2 cut(s)	1966, 2009
BsaJI	CCNNGG	6 cut(s)	81, 763, 1324, 1430, 1485, 2187
BsaWI	WCCGGW	1 cut(s)	1792
BsaXI	ACNNNNNCTCC	6 cut(s)	214, 244, 581, 611, 1359, 1389
Bsc4I	CCNNNNNNNGG	8 cut(s)	130, 872, 994, 1433, 1505, 2001, 2221, 2338
Bse118I	RCCGGY	1 cut(s)	2201
Bse1I	ACTGG	5 cut(s)	422, 1995, 2019, 2068, 2324
Bse3DI	GCAATG	3 cut(s)	70, 224, 1315
Bse8I	GATNNNNATC	3 cut(s)	513, 1044, 1938
BseBI	CCWGG	6 cut(s)	82, 94, 1107, 1487, 1495, 2436
BseDI	CCNNGG	6 cut(s)	81, 763, 1324, 1430, 1485, 2187
BseGI	GGATG	7 cut(s)	811, 1393, 1651, 1846, 1879, 1960, 2197
BseJI	GATNNNNATC	3 cut(s)	513, 1044, 1938
BseLI	CCNNNNNNNGG	8 cut(s)	130, 872, 994, 1433, 1505, 2001, 2221, 2338
BseMI	GCAATG	3 cut(s)	70, 224, 1315
BseMII	CTCAG	3 cut(s)	672, 1085, 2421
BseNI	ACTGG	5 cut(s)	422, 1995, 2019, 2068, 2324
BseRI	GAGGAG	5 cut(s)	43, 1455, 2395, 2417, 2450
BseXI	GCAGC	4 cut(s)	909, 912, 1477, 1493
BseYI	CCCAGC	1 cut(s)	1715
Bsh1236I	CGCG	3 cut(s)	789, 995, 2432
BshFI	GGCC	9 cut(s)	92, 176, 1007, 1082, 1255, 1265, 1498, 1720, 2178
BshNI	GGYRCC	4 cut(s)	77, 915, 1197, 1795
BsiHKCI	CYCGRG	2 cut(s)	929, 2186
BsiSI	CCGG	6 cut(s)	974, 1053, 1793, 2104, 2202, 2403
BslFI	GGGAC	3 cut(s)	107, 753, 1328
BslI	CCNNNNNNNGG	8 cut(s)	130, 872, 994, 1433, 1505, 2001, 2221, 2338
BsmAI	GTCTC	7 cut(s)	686, 1610, 1747, 1966, 2009, 2377, 2460
BsmFI	GGGAC	3 cut(s)	107, 753, 1328
BsmI	GAATGC	1 cut(s)	1596
BsnI	GGCC	9 cut(s)	92, 176, 1007, 1082, 1255, 1265, 1498, 1720, 2178
Bso31I	GGTCTC	2 cut(s)	1966, 2009
BsoBI	CYCGRG	2 cut(s)	929, 2186
Bsp119I	TTCGAA	1 cut(s)	982
Bsp1286I	GDGCHC	2 cut(s)	1909, 2396
Bsp1407I	TGTACA	3 cut(s)	844, 1312, 2161
Bsp143I	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
Bsp1720I	GCTNAGC	1 cut(s)	564
Bsp19I	CCATGG	1 cut(s)	1324
BspACI	CCGC	9 cut(s)	131, 300, 651, 995, 998, 1056, 1391, 2124, 2465
BspANI	GGCC	9 cut(s)	92, 176, 1007, 1082, 1255, 1265, 1498, 1720, 2178
BspCNI	CTCAG	3 cut(s)	673, 1084, 2420
BspFNI	CGCG	3 cut(s)	789, 995, 2432
BspLI	GGNNCC	8 cut(s)	79, 769, 917, 1199, 1281, 1344, 1797, 2395
BspMI	ACCTGC	2 cut(s)	1114, 1574
BspOI	GCTAGC	1 cut(s)	941
BspPI	GGATC	3 cut(s)	522, 2012, 2349
BspQI	GCTCTTC	1 cut(s)	1374
BspT104I	TTCGAA	1 cut(s)	982
BspT107I	GGYRCC	4 cut(s)	77, 915, 1197, 1795
BspTNI	GGTCTC	2 cut(s)	1966, 2009
BsrBI	CCGCTC	1 cut(s)	651
BsrDI	GCAATG	3 cut(s)	70, 224, 1315
BsrFI	RCCGGY	1 cut(s)	2201
BsrGI	TGTACA	3 cut(s)	844, 1312, 2161
BsrI	ACTGG	5 cut(s)	422, 1995, 2019, 2068, 2324
BssAI	RCCGGY	1 cut(s)	2201
BssECI	CCNNGG	6 cut(s)	81, 763, 1324, 1430, 1485, 2187
BssMI	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
BssSI	CACGAG	1 cut(s)	1500
BssT1I	CCWWGG	3 cut(s)	763, 1324, 1430
Bst2BI	CACGAG	1 cut(s)	1500
Bst2UI	CCWGG	6 cut(s)	82, 94, 1107, 1487, 1495, 2436
Bst6I	CTCTTC	6 cut(s)	1092, 1374, 1668, 1851, 2162, 2325
BstAUI	TGTACA	3 cut(s)	844, 1312, 2161
BstBAI	YACGTR	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	982
BstC8I	GCNNGC	4 cut(s)	920, 939, 1064, 1909
BstDEI	CTNAG	6 cut(s)	162, 564, 681, 1071, 2272, 2407
BstDSI	CCRYGG	1 cut(s)	1324
BstEII	GGTNACC	1 cut(s)	620
BstF5I	GGATG	7 cut(s)	811, 1393, 1651, 1846, 1879, 1960, 2197
BstFNI	CGCG	3 cut(s)	789, 995, 2432
BstH2I	RGCGCY	1 cut(s)	1553
BstHHI	GCGC	2 cut(s)	1552, 2434
BstKTI	GATC	6 cut(s)	517, 1102, 2007, 2101, 2152, 2344
BstMAI	GTCTC	7 cut(s)	686, 1610, 1747, 1966, 2009, 2377, 2460
BstMBI	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
BstNI	CCWGG	6 cut(s)	82, 94, 1107, 1487, 1495, 2436
BstNSI	RCATGY	1 cut(s)	1643
BstPAI	GACNNNNGTC	2 cut(s)	873, 2066
BstPI	GGTNACC	1 cut(s)	620
BstSCI	CCNGG	8 cut(s)	80, 92, 973, 1105, 1485, 1493, 2103, 2434
BstSFI	CTRYAG	1 cut(s)	2226
BstSNI	TACGTA	1 cut(s)	1631
BstUI	CGCG	3 cut(s)	789, 995, 2432
BstV1I	GCAGC	4 cut(s)	909, 912, 1477, 1493
BsuRI	GGCC	9 cut(s)	92, 176, 1007, 1082, 1255, 1265, 1498, 1720, 2178
BtgI	CCRYGG	1 cut(s)	1324
BtsCI	GGATG	7 cut(s)	811, 1393, 1651, 1846, 1879, 1960, 2197
BtsI	GCAGTG	1 cut(s)	1897
BtsIMutI	CAGTG	5 cut(s)	202, 742, 818, 1767, 1897
BveI	ACCTGC	2 cut(s)	1114, 1574
Cac8I	GCNNGC	4 cut(s)	920, 939, 1064, 1909
CaiI	CAGNNNCTG	1 cut(s)	925
CfoI	GCGC	2 cut(s)	1552, 2434
Cfr10I	RCCGGY	1 cut(s)	2201
Cfr13I	GGNCC	6 cut(s)	133, 767, 1109, 1254, 1342, 1718
CpoI	CGGWCCG	1 cut(s)	133
CseI	GACGC	2 cut(s)	778, 1001
Csp6I	GTAC	7 cut(s)	78, 244, 412, 845, 1313, 2036, 2162
CspI	CGGWCCG	1 cut(s)	133
CviAII	CATG	8 cut(s)	500, 719, 1325, 1514, 1565, 1640, 1901, 2367
CviQI	GTAC	7 cut(s)	78, 244, 412, 845, 1313, 2036, 2162
DdeI	CTNAG	6 cut(s)	162, 564, 681, 1071, 2272, 2407
DpnI	GATC	6 cut(s)	516, 1101, 2006, 2100, 2151, 2343
DpnII	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
DraIII	CACNNNGTG	1 cut(s)	360
EaeI	YGGCCR	2 cut(s)	174, 2176
Eam1104I	CTCTTC	6 cut(s)	1092, 1374, 1668, 1851, 2162, 2325
EarI	CTCTTC	6 cut(s)	1092, 1374, 1668, 1851, 2162, 2325
EciI	GGCGGA	1 cut(s)	315
Eco105I	TACGTA	1 cut(s)	1631
Eco130I	CCWWGG	3 cut(s)	763, 1324, 1430
Eco147I	AGGCCT	1 cut(s)	1265
Eco24I	GRGCYC	2 cut(s)	1909, 2396
Eco31I	GGTCTC	2 cut(s)	1966, 2009
Eco32I	GATATC	2 cut(s)	1936, 2133
Eco47I	GGWCC	4 cut(s)	133, 767, 1109, 1342
Eco57I	CTGAAG	1 cut(s)	1377
Eco88I	CYCGRG	2 cut(s)	929, 2186
Eco91I	GGTNACC	1 cut(s)	620
EcoO109I	RGGNCCY	2 cut(s)	767, 1109
EcoO65I	GGTNACC	1 cut(s)	620
EcoRII	CCWGG	6 cut(s)	80, 92, 1105, 1485, 1493, 2434
EcoRV	GATATC	2 cut(s)	1936, 2133
EcoT14I	CCWWGG	3 cut(s)	763, 1324, 1430
EcoT22I	ATGCAT	1 cut(s)	2368
EcoT38I	GRGCYC	2 cut(s)	1909, 2396
ErhI	CCWWGG	3 cut(s)	763, 1324, 1430
FaeI	CATG	8 cut(s)	503, 722, 1328, 1517, 1568, 1643, 1904, 2370
FalI	AAGNNNNNCTT	4 cut(s)	1001, 1033, 2304, 2336
FaqI	GGGAC	3 cut(s)	107, 753, 1328
FatI	CATG	8 cut(s)	499, 718, 1324, 1513, 1564, 1639, 1900, 2366
FauI	CCCGC	1 cut(s)	2472
FbaI	TGATCA	1 cut(s)	2149
Fnu4HI	GCNGC	7 cut(s)	923, 926, 996, 999, 1392, 1482, 1491
FokI	GGATG	7 cut(s)	818, 1400, 1638, 1853, 1886, 1967, 2204
FriOI	GRGCYC	2 cut(s)	1909, 2396
Fsp4HI	GCNGC	7 cut(s)	923, 926, 996, 999, 1392, 1482, 1491
FspBI	CTAG	6 cut(s)	810, 938, 1094, 1364, 1446, 1469
GlaI	GCGC	2 cut(s)	1551, 2433
GluI	GCNGC	7 cut(s)	923, 926, 996, 999, 1392, 1482, 1491
GsaI	CCCAGC	1 cut(s)	1719
HaeII	RGCGCY	1 cut(s)	1553
HaeIII	GGCC	9 cut(s)	92, 176, 1007, 1082, 1255, 1265, 1498, 1720, 2178
HapII	CCGG	6 cut(s)	974, 1053, 1793, 2104, 2202, 2403
HgaI	GACGC	2 cut(s)	778, 1001
HhaI	GCGC	2 cut(s)	1552, 2434
Hin1II	CATG	8 cut(s)	503, 722, 1328, 1517, 1568, 1643, 1904, 2370
Hin6I	GCGC	2 cut(s)	1550, 2432
HinP1I	GCGC	2 cut(s)	1550, 2432
HincII	GTYRAC	1 cut(s)	1141
HindII	GTYRAC	1 cut(s)	1141
HindIII	AAGCTT	2 cut(s)	566, 1272
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	6 cut(s)	974, 1053, 1793, 2104, 2202, 2403
HphI	GGTGA	6 cut(s)	46, 98, 272, 350, 1429, 1682
Hpy166II	GTNNAC	4 cut(s)	193, 456, 818, 1141
Hpy188III	TCNNGA	5 cut(s)	315, 689, 1502, 2014, 2186
Hpy8I	GTNNAC	4 cut(s)	193, 456, 818, 1141
Hpy99I	CGWCG	3 cut(s)	794, 995, 1223
HpyAV	CCTTC	8 cut(s)	10, 110, 391, 997, 1288, 1571, 2236, 2364
HpyCH4IV	ACGT	5 cut(s)	1077, 1231, 1630, 2025, 2157
HpyCH4V	TGCA	8 cut(s)	146, 212, 354, 758, 1123, 1308, 1583, 2366
HpyF3I	CTNAG	6 cut(s)	162, 564, 681, 1071, 2272, 2407
HpySE526I	ACGT	5 cut(s)	1077, 1231, 1630, 2025, 2157
Hsp92II	CATG	8 cut(s)	503, 722, 1328, 1517, 1568, 1643, 1904, 2370
HspAI	GCGC	2 cut(s)	1550, 2432
KpnI	GGTACC	1 cut(s)	81
Ksp22I	TGATCA	1 cut(s)	2149
KspAI	GTTAAC	1 cut(s)	1141
Kzo9I	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
LguI	GCTCTTC	1 cut(s)	1374
LmnI	GCTCC	3 cut(s)	1285, 2399, 2430
Lsp1109I	GCAGC	4 cut(s)	909, 912, 1477, 1493
LweI	GCATC	8 cut(s)	248, 796, 1378, 1570, 1668, 1831, 1864, 2353
MaeI	CTAG	6 cut(s)	810, 938, 1094, 1364, 1446, 1469
MaeII	ACGT	5 cut(s)	1077, 1231, 1630, 2025, 2157
MaeIII	GTNAC	5 cut(s)	608, 620, 888, 2021, 2446
MalI	GATC	6 cut(s)	516, 1101, 2006, 2100, 2151, 2343
MbiI	CCGCTC	1 cut(s)	651
MboI	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
MhlI	GDGCHC	2 cut(s)	1909, 2396
MlsI	TGGCCA	1 cut(s)	2178
MluCI	AATT	6 cut(s)	21, 219, 292, 392, 1917, 2278
MluI	ACGCGT	1 cut(s)	787
MluNI	TGGCCA	1 cut(s)	2178
MlyI	GAGTC	4 cut(s)	129, 718, 1749, 2462
Mox20I	TGGCCA	1 cut(s)	2178
Mph1103I	ATGCAT	1 cut(s)	2368
MroXI	GAANNNNTTC	1 cut(s)	2258
MscI	TGGCCA	1 cut(s)	2178
MseI	TTAA	6 cut(s)	105, 534, 902, 1140, 1947, 2049
MslI	CAYNNNNRTG	4 cut(s)	504, 682, 1601, 1868
Msp20I	TGGCCA	1 cut(s)	2178
MspA1I	CMGCKG	1 cut(s)	922
MspI	CCGG	6 cut(s)	974, 1053, 1793, 2104, 2202, 2403
MspR9I	CCNGG	8 cut(s)	82, 94, 975, 1107, 1487, 1495, 2105, 2436
Mva1269I	GAATGC	1 cut(s)	1596
MvaI	CCWGG	6 cut(s)	82, 94, 1107, 1487, 1495, 2436
MvnI	CGCG	3 cut(s)	789, 995, 2432
NciI	CCSGG	2 cut(s)	975, 2105
NcoI	CCATGG	1 cut(s)	1324
NdeII	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
NheI	GCTAGC	1 cut(s)	937
NlaIII	CATG	8 cut(s)	503, 722, 1328, 1517, 1568, 1643, 1904, 2370
NlaIV	GGNNCC	8 cut(s)	79, 769, 917, 1199, 1281, 1344, 1797, 2395
NmuCI	GTSAC	2 cut(s)	608, 2446
NsiI	ATGCAT	1 cut(s)	2368
NspI	RCATGY	1 cut(s)	1643
NspV	TTCGAA	1 cut(s)	982
PceI	AGGCCT	1 cut(s)	1265
PciSI	GCTCTTC	1 cut(s)	1374
PctI	GAATGC	1 cut(s)	1596
PdmI	GAANNNNTTC	1 cut(s)	2258
PfeI	GAWTC	8 cut(s)	158, 311, 461, 485, 1045, 1688, 1789, 2140
PflMI	CCANNNNNTGG	1 cut(s)	2001
PfoI	TCCNGGA	1 cut(s)	1105
PkrI	GCNGC	7 cut(s)	924, 927, 997, 1000, 1393, 1483, 1492
PleI	GAGTC	4 cut(s)	128, 717, 1749, 2461
PpsI	GAGTC	4 cut(s)	128, 717, 1749, 2461
Ppu21I	YACGTR	1 cut(s)	1631
PpuMI	RGGWCCY	2 cut(s)	767, 1109
PshAI	GACNNNNGTC	2 cut(s)	873, 2066
Psp1406I	AACGTT	2 cut(s)	2025, 2157
Psp5II	RGGWCCY	2 cut(s)	767, 1109
Psp6I	CCWGG	6 cut(s)	80, 92, 1105, 1485, 1493, 2434
PspEI	GGTNACC	1 cut(s)	620
PspFI	CCCAGC	1 cut(s)	1715
PspGI	CCWGG	6 cut(s)	80, 92, 1105, 1485, 1493, 2434
PspN4I	GGNNCC	8 cut(s)	79, 769, 917, 1199, 1281, 1344, 1797, 2395
PspPI	GGNCC	6 cut(s)	133, 767, 1109, 1254, 1342, 1718
PspPPI	RGGWCCY	2 cut(s)	767, 1109
PstNI	CAGNNNCTG	1 cut(s)	925
PvuII	CAGCTG	1 cut(s)	922
RsaI	GTAC	7 cut(s)	79, 245, 413, 846, 1314, 2037, 2163
RsaNI	GTAC	7 cut(s)	78, 244, 412, 845, 1313, 2036, 2162
RseI	CAYNNNNRTG	4 cut(s)	504, 682, 1601, 1868
Rsr2I	CGGWCCG	1 cut(s)	133
RsrII	CGGWCCG	1 cut(s)	133
SapI	GCTCTTC	1 cut(s)	1374
SaqAI	TTAA	6 cut(s)	105, 534, 902, 1140, 1947, 2049
SatI	GCNGC	7 cut(s)	923, 926, 996, 999, 1392, 1482, 1491
Sau3AI	GATC	6 cut(s)	514, 1099, 2004, 2098, 2149, 2341
Sau96I	GGNCC	6 cut(s)	133, 767, 1109, 1254, 1342, 1718
SchI	GAGTC	4 cut(s)	129, 718, 1749, 2462
ScrFI	CCNGG	8 cut(s)	82, 94, 975, 1107, 1487, 1495, 2105, 2436
SduI	GDGCHC	2 cut(s)	1909, 2396
SfaNI	GCATC	8 cut(s)	248, 796, 1378, 1570, 1668, 1831, 1864, 2353
SfcI	CTRYAG	1 cut(s)	2226
SfuI	TTCGAA	1 cut(s)	982
SinI	GGWCC	4 cut(s)	133, 767, 1109, 1342
SmiMI	CAYNNNNRTG	4 cut(s)	504, 682, 1601, 1868
SmlI	CTYRAG	4 cut(s)	449, 646, 1202, 2333
SmoI	CTYRAG	4 cut(s)	449, 646, 1202, 2333
SnaBI	TACGTA	1 cut(s)	1631
Sse9I	AATT	6 cut(s)	21, 219, 292, 392, 1917, 2278
SseBI	AGGCCT	1 cut(s)	1265
SsiI	CCGC	9 cut(s)	131, 300, 651, 995, 998, 1056, 1391, 2124, 2465
SspI	AATATT	1 cut(s)	442
SspMI	CTAG	6 cut(s)	810, 938, 1094, 1364, 1446, 1469
StuI	AGGCCT	1 cut(s)	1265
StyD4I	CCNGG	8 cut(s)	80, 92, 973, 1105, 1485, 1493, 2103, 2434
StyI	CCWWGG	3 cut(s)	763, 1324, 1430
TaiI	ACGT	5 cut(s)	1080, 1234, 1633, 2028, 2160
TaqI	TCGA	8 cut(s)	248, 982, 990, 1020, 1211, 1377, 2013, 2283
TaqII	GACCGA	2 cut(s)	25, 1232
TasI	AATT	6 cut(s)	21, 219, 292, 392, 1917, 2278
TatI	WGTACW	4 cut(s)	411, 844, 1312, 2161
TauI	GCSGC	3 cut(s)	998, 1001, 1394
TfiI	GAWTC	8 cut(s)	158, 311, 461, 485, 1045, 1688, 1789, 2140
Tru1I	TTAA	6 cut(s)	105, 534, 902, 1140, 1947, 2049
Tru9I	TTAA	6 cut(s)	105, 534, 902, 1140, 1947, 2049
TscAI	CASTG	5 cut(s)	202, 742, 825, 1774, 1897
TseFI	GTSAC	2 cut(s)	608, 2446
TseI	GCWGC	4 cut(s)	922, 925, 1481, 1490
Tsp45I	GTSAC	2 cut(s)	608, 2446
TspDTI	ATGAA	9 cut(s)	666, 1058, 1079, 1502, 1553, 1971, 1972, 2255, 2267
TspGWI	ACGGA	2 cut(s)	958, 1411
TspRI	CASTG	5 cut(s)	202, 742, 825, 1774, 1897
Van91I	CCANNNNNTGG	1 cut(s)	2001
VpaK11BI	GGWCC	4 cut(s)	133, 767, 1109, 1342
XapI	RAATTY	1 cut(s)	2278
XceI	RCATGY	1 cut(s)	1643
XmnI	GAANNNNTTC	1 cut(s)	2258
XspI	CTAG	6 cut(s)	810, 938, 1094, 1364, 1446, 1469
Zsp2I	ATGCAT	1 cut(s)	2368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.