Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001986.1

Orthogroup ID

OG0017342

Physical Location & Seq

Genomic Coordinates Reverse (-)

127606 .. 135810

Gene Structure 8205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6372 bp

atggatgcagactcctcattcgagctggaaaactctatttccggccacctcccacgttacaccacccctgtggcaggctcgtcgcattatgactcccgctcattcacaccggttagctccgctcacttgagaactccgagaactcccagaaggtctcgccaccccactccaactacgcctttcgcctcggacaatgacatgtcgtggcaaggcgagatctcctggcagtttgagccgacggggtggaacgagactcgcaacttgggctcagctatgagcccatgggccaccgtgagcacgtcctctcgccaggcccagcgtgcccaccgctcagcaaattactactacctctcccgtaccactggcgggtttcgtacctccccaaatcaatattacaacgagtactccagctatggtgctgtgaccgatgggagacttgagcttaagagctacgttgctagggacaatgaaagctcaacttttgggaggagtagttacaattatggggagcagaagaaaccctttagggcagttactccaaggttggagggtattaaagaagcagctgggagtggaaatttcagtggcagtggccctttggctaagaaagatttgcttggtttgatcgattatcaaacagcagaagatgatgatgaagatgagagtttgggtcatagtggacaccatggtcatggcctatatcttgatcatggtcataggccatcacacaaaggacatgatcatgggttgtcacccatgggtcatcatggtcatgacacgtggccgcattcaattactagtcacgatattgatgatgagagtgatcagggttctgggtatgaggatgaggatgaggatgaggatgaggatgatgcaaggccagtgaagcaagttgggttgtttagcttgttcaagtactcaacaaaatgggatatgtttcttgtgtttttgggttgtgttggtgctcttatcaatggagggtctcttccttggtattcttatctctttggaaagtttgtgaataagattgctaaagaatcaaaggacgttgacaaaggccccatgatgagagatgtagagaagatatgcctgcttatgactggtttagctgcaatagtagtagttggagcatatatggactcctcattcgagctggaaaactctatttccggccacctcccacgttacaccacccctgtggcaggctcgtcgcattatgactcccgctcattcacaccggttagctccgctcacttgagaactccgagaactcccagaaggtctcgccaccccactccaactacgcctttcgcctcggacaatgacatgtcgtggcaaggcgagatctcctggcagtttgagccgacggggtggaacgagactcgcaacttgggctcagctatgagcccatgggccaccgtgagcacgtcctctcgccaggcccagcgtgcccaccgctcagcaaattactactacctctcccgtaccactggcgggtttcgtacctccccaaatcaatattacaacgagtactccagctatggtgctgtgaccgatgggagacttgagcttaagagctacgttgctagggacaatgaaagctcaacttttgggaggagtagttacaattatggggagcagaagaaaccctttagggcagttactccaaggttggagggtattaaagaagcagctgggagtggaaatttcagtggcagtggccctttggctaagaaagatttgcttggtttgatcgattatcaaacagcagaagatgatgatgaagatgagagtttgggtcatagtggacaccatggtcatggcctatatcttgatcatggtcataggccatcacacaaaggacatgatcatgggttgtcacccatgggtcatcatggtcatgacacgtggccgcattcaattactagtcacgatattgatgatgagagtgatcagggttctgggtatgaggatgaggatgaggatgaggatgaggatgatgcaaggccagtgaagcaagttgggttgtttagcttgttcaagtactcaacaaaatgggatatgtttcttgtgtttttgggttgtgttggtgctcttatcaatggagggtctcttccttggtattcttatctctttggaaagtttgtgaataagattgctaaagaatcaaaggacgttgacaaaggccccatgatgagagatgtagagaagatatgcctgcttatgactggtttagctgcaatagtagtagttggagcatatatggagatcacttgttggagaatggtgggggaaagatctgctcagagaataagaagagaatatctaaaagcagttctgcgacaagacattagcttttttgatactgagattgctgctggtgatattatgcatggaatttcaagtgatgttgctgcaatccaagaagtcatgggggagaagaagaaaccctttagggcagttactccaaggttggagggtattaaagaagcagctgggagtggaaatttcagtggcagtggccctttggctaagaaagatttgcttggtttgatcgattatcaaacagcagaagatgatgatgaagatgagagtttgggtcatagtggacaccatggtcatggcctatatcttgatcatggtcataggccatcacacaaaggacatgatcatgggttgtcacccatgggtcatcatggtcatgacacgtggccgcattcaattactagtcacgatattgatgatgagagtgatcagggttctgggtatgaggatgaggatgaggatgaggatgaggatgatgcaaggccagtgaagcaagttgggttgtttagcttgttcaagtactcaacaaaatgggatatgtttcttgtgtttttgggttgtgttggtgctcttatcaatggagggtctcttccttggtattcttatctctttggaaagtttgtgaataagattgctaaagaatcaaaggacgttgacaaaggccccatgatgagagatgtagagaagatatgcctgcttatgactggtttagctgcaatagtagtagttggagcatatatggagatcacttgttggagaatggtgggggaaagatctgctcagagaataagaagagaatatctaaaagcagttctgcgacaagacattagcttttttgatactgagattgctgctggtgatattatgcatggaatttcaagtgatgttgctgcaatccaagaagtcatgggggagaagatggcacatttcattcaccatatatgtaccttcatatgtggatacacagttgggtttctaaggacagctggtactgtagtcgagcaagctgtcagttcaatcagaacagtattttcctttgttgcggaggatcatttggctgaaaaatattctgcattaattgccaacttggtgccttttggagcaaagattggctttgctaagggtgcaggaatcggagttatctatcttgttagttattctacatgggcgttggctttctggtacggttctcttttggttgctaagggtgagatcactggaggtgctgccattgcttgtttctttggtgtaaatgtcgggggaaggggcttggcattgtcactgtcatactttgctcagtttgcacaagggaccgtagcagcaggccgagtatttgaaattatagatagagttccagaaatagatccctacagcccagtaggtaggaaactgtcaaatgttcgaggaaggattgaatttaaaggcatttatttcgcatacccgtctcgtcctgaagctccaatttttcattcgcttaatctggtcattccatcttcaaagacgctagcacttgttggctctagcggaggtggaaagtctacgatctttgctcttatagagagattctatgaccctaccaaaggtacaataacattggatggtcatgatttaaggtcacttcaggtgaagtggctaaggggtcagatgggcatggttggtcaggagccagtgctctttgccaccagcattttagaaaacgtgttgatggggaaagagaatgccaccaagaaagaagcaattactgcctgcattgctgccaatgctcacagcttcatttctggacttccgcatggctatgacactcaggttggagacagaggaacactactctcaggtggtcagaaacaaagaattgcattggctcgagcgatgatcaaggaccctagaatccttctcttggatgaacctaccagtgccttagaccctgaatccgagactgtagtccaacaggctattgacaaaatttcctcaggacgaacaactattgtaattgctcacaggctatcaactgtaagaaactctcatgccattgttgttcttgacagtggctctgtcattgagattggtaaccaccgccagctcatggaaaaagccggggcgtattatagcctcgttgagcttgcttctgatggagtgacaaaacctttttcggaacaatatgatactggaattagccctcagttttccaggtttgacaaatcagcttatgatgtatcaagatcaacattcatgcaagatcgaaaccaagtagaagagaaagaggtccaaaaaccaattccaagaaaggttcagctttcagatatatggttgttacagaggcctgagctcccaatgctattagttggatttcttttgggcatgcatgcaggtgcgattctatctatcttcccttatattctaggccaagcacttgtagtttattttgataaagagccatcaaagatcaaaacaggaatcgcgcccctttgcttagtacttgttgcacttggctttgggaatatactcttcatgacaggacaacaaggcttgtgtggctgggctggaacaaagctcacaatgagagtgagaaaccttcttttccgttccatacttaaacaagaacctggttggtttgattttgaagaaaactcaaaagcggtacttgtctctaggatttcaatggattctgtggcttttcgtgccgtccatgttgatcgattatcagtcttgtttatggggttgagttcagctatggttggattgggcatatccttttggcttgaatggaggctagctcttttggctgctgctctcactcctttcactcttggtgcaagttacttgagcttgatcataaatatagggcccaaacttgacaatgatgcttatgccaaggctagcaatattgcttctggtgcagtttcaaacataaggacggttgcaacattttctgctcaagaccagttgatcaagtcctttgatagtgctttatcggagccaaagacaaaatcaatgagaagaacgcaaataatgggcctagcactcgggttctctcaaggtgttatgtacggagcttacaccttaactctcttgtttggtgcttaccttatgaaagaaaacaaaactaatttcggtgatgtttacaaaatctttctcattcttgttctgagctcattttctgtgggacaattagccggtcttgcaccagacacatctatggctgaaacagcaattccagcagtttttgatatcatgactcgtaagcccttaatcagcagtgggagaggaaaggataagaagattgaaaggtcgaaacgtttagatattcacttcaaaatggtgacgtttgcatatccatcaaggcctgaggtaactgtgttgagtgaattttccctcaaggtcaaaggtggtagcacagtggcattggtgggtggaagtggatcgggaaaatcaactgtcatatggttaatacaaaggttttatgatccaactcaagggaaggtgatgatggggggagtggatttgagggagattgatgtgaagtggttaagaaggcaaacagctttagttggtcaagagcctacattgtttgctggcactataagagagaacattgcttttggtaacccggatgcttcatggactgaaattgaagatgctgcaagagaagcttacatccacagcttcattagtggcctccctcaaggctatgaaactcaggttggtgagagtggggttcagctatctggggggcagaagcaaaggattgccatagcaagagctatactgaagaaatcaaaggtactacttctagatgaagcaagtagtgcactagatttggaatctgagagacatatacaagacgcacttaggaaagtcagcaaaagggccacgacaatcatagtcgctcaccggctttctactatcagggaagctgatatgatagcagttatgaaagatggtggcatcactgaatatgggagccatgatacgctcatgaaatctcatcttaatggcgtgtatgccagcttggtgcgtgcagaaaccgaagccaatgcattttcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010218 GO:0010315 GO:0010329 GO:0010540 GO:0010541 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0016043 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0044464 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048527 GO:0048528 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0090691 GO:0090696 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

2123

Amino Acids

233.6

Weight (kDa)

6.14

Isoelectric Point (pI)

35.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	691 - 814	4.7e-20	ABC transporter transmembrane region
ABC_membrane	PF00664	958 - 1101	1.7e-26	ABC transporter transmembrane region
ABC_membrane	PF00664	1104 - 1193	6.2e-12	ABC transporter transmembrane region
ABC_tran	PF00005	1265 - 1413	2e-31	ABC transporter
ABC_membrane	PF00664	1554 - 1825	2.8e-43	ABC transporter transmembrane region
SMC_N	PF02463	1580 - 2086	1.5e-06	RecF/RecN/SMC N terminal domain
ABC_tran	PF00005	1896 - 2043	3.4e-30	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0017342)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g35260
malus_domestica	MD09G1177100.v1.1 MD17G1149200.v1.1
prunus_persica	Prupe.3G036400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0146621
rosa_laevigata	RLG00000020211
rosa_multiflora	Rmu_sc0001986.1_g000032
rosa_roxburghii	Rroxscaffold_2G00100000
rosa_rugosa	Rorug02G0395800 Rorug02G0395800
rosa_samantha	Rh2BG464800 Rh2DG473800
rosa_wichuraiana	Rw2G036930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	4682
AasI	GACNNNNNNGTC	3 cut(s)	687, 1815, 2616
Acc36I	ACCTGC	1 cut(s)	4682
AccB1I	GGYRCC	1 cut(s)	3415
AccB7I	CCANNNNNTGG	1 cut(s)	4408
AccBSI	CCGCTC	6 cut(s)	99, 122, 330, 1227, 1250, 1458
AccI	GTMKAC	1 cut(s)	3863
AccII	CGCG	1 cut(s)	4784
AclI	AACGTT	1 cut(s)	5620
AclWI	GGATC	4 cut(s)	3381, 3683, 5752, 5783
AcoI	YGGCCR	5 cut(s)	43, 782, 1171, 1910, 2711
AcsI	RAATTY	8 cut(s)	577, 1705, 2397, 2506, 3198, 3740, 4287, 5690
AcuI	CTGAAG	3 cut(s)	3798, 3929, 6113
AcvI	CACGTG	3 cut(s)	780, 1908, 2709
AfiI	CCNNNNNNNGG	8 cut(s)	74, 366, 1202, 1494, 3905, 4222, 4408, 5798
AflII	CTTAAG	2 cut(s)	443, 1571
AflIII	ACRYGT	6 cut(s)	198, 777, 1326, 1905, 2706, 4023
AgeI	ACCGGT	2 cut(s)	109, 1237
AhlI	ACTAGT	3 cut(s)	797, 1925, 2726
AjiI	CACGTC	2 cut(s)	300, 1428
AjnI	CCWGG	6 cut(s)	221, 309, 1349, 1437, 4511, 4927
AjuI	GAANNNNNNNTTGG	6 cut(s)	3778, 3810, 4584, 4616, 6009, 6041
AleI	CACNNNNGTG	2 cut(s)	68, 1196
Alw21I	GWGCWC	9 cut(s)	299, 967, 1427, 2095, 2896, 3999, 4653, 5477, 6136
Alw44I	GTGCAC	1 cut(s)	6132
AlwI	GGATC	4 cut(s)	3381, 3683, 5752, 5783
Ama87I	CYCGRG	2 cut(s)	4188, 5348
ApaI	GGGCCC	1 cut(s)	5172
ApaLI	GTGCAC	1 cut(s)	6132
ApoI	RAATTY	8 cut(s)	577, 1705, 2397, 2506, 3198, 3740, 4287, 5690
ArsI	GACNNNNNNTTYG	3 cut(s)	34, 1130, 1162
AseI	ATTAAT	1 cut(s)	3401
AsiGI	ACCGGT	2 cut(s)	109, 1237
AspLEI	GCGC	1 cut(s)	4786
AsuC2I	CCSGG	2 cut(s)	4420, 5933
AsuNHI	GCTAGC	3 cut(s)	3829, 5095, 5201
AvaI	CYCGRG	2 cut(s)	4188, 5348
AvaII	GGWCC	3 cut(s)	3636, 4204, 4588
AxyI	CCTNAGG	2 cut(s)	4294, 5670
BaeGI	GKGCMC	4 cut(s)	325, 1453, 5172, 6136
BaeI	ACNNNNGTAYC	2 cut(s)	3306, 3339
BanI	GGYRCC	1 cut(s)	3415
BanII	GRGCYC	7 cut(s)	269, 281, 1397, 1409, 4653, 5172, 5477
BbrPI	CACGTG	3 cut(s)	780, 1908, 2709
Bbv12I	GWGCWC	9 cut(s)	299, 967, 1427, 2095, 2896, 3999, 4653, 5477, 6136
BceAI	ACGGC	1 cut(s)	4991
BcgI	CGANNNNNNTGC	7 cut(s)	63, 97, 1191, 1225, 3739, 3773, 6341
BciT130I	CCWGG	6 cut(s)	223, 311, 1351, 1439, 4513, 4929
BciVI	GTATCC	1 cut(s)	3278
BcnI	CCSGG	2 cut(s)	4420, 5933
BcuI	ACTAGT	3 cut(s)	797, 1925, 2726
BfmI	CTRYAG	3 cut(s)	3318, 3694, 4263
BfrI	CTTAAG	2 cut(s)	443, 1571
BfuAI	ACCTGC	1 cut(s)	4682
BfuI	GTATCC	1 cut(s)	3278
BglII	AGATCT	4 cut(s)	216, 1344, 2297, 3098
BlpI	GCTNAGC	4 cut(s)	268, 331, 1396, 1459
BmcAI	AGTACT	6 cut(s)	404, 917, 1532, 2045, 2846, 4800
Bme1390I	CCNGG	8 cut(s)	223, 311, 1351, 1439, 4420, 4513, 4929, 5933
Bme18I	GGWCC	3 cut(s)	3636, 4204, 4588
BmeT110I	CYCGRG	2 cut(s)	4188, 5348
BmgBI	CACGTC	2 cut(s)	300, 1428
BmrFI	CCNGG	8 cut(s)	223, 311, 1351, 1439, 4420, 4513, 4929, 5933
BmrI	ACTGGG	1 cut(s)	3695
BmsI	GCATC	7 cut(s)	862, 1990, 2791, 5176, 5926, 5950, 6279
BmtI	GCTAGC	3 cut(s)	3833, 5099, 5205
BmuI	ACTGGG	1 cut(s)	3695
BoxI	GACNNNNGTC	1 cut(s)	4265
BplI	GAGNNNNNCTC	2 cut(s)	5083, 5115
BpmI	CTGGAG	3 cut(s)	391, 1519, 3564
Bpu10I	CCTNAGC	4 cut(s)	3444, 3528, 3959, 4647
Bpu1102I	GCTNAGC	4 cut(s)	268, 331, 1396, 1459
BpuMI	CCSGG	2 cut(s)	4420, 5933
Bsa29I	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
BsaAI	YACGTR	3 cut(s)	780, 1908, 2709
BsaI	GGTCTC	5 cut(s)	159, 987, 1287, 2115, 2916
BsaWI	WCCGGW	2 cut(s)	109, 1237
Bsc4I	CCNNNNNNNGG	8 cut(s)	74, 366, 1202, 1494, 3905, 4222, 4408, 5798
Bse118I	RCCGGY	4 cut(s)	109, 1237, 5498, 6216
Bse21I	CCTNAGG	2 cut(s)	4294, 5670
Bse3DI	GCAATG	3 cut(s)	3555, 4074, 5916
BseBI	CCWGG	6 cut(s)	223, 311, 1351, 1439, 4513, 4929
BseCI	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
BseLI	CCNNNNNNNGG	8 cut(s)	74, 366, 1202, 1494, 3905, 4222, 4408, 5798
BseMI	GCAATG	3 cut(s)	3555, 4074, 5916
BseRI	GAGGAG	4 cut(s)	4, 502, 1132, 1630
BseSI	GKGCMC	4 cut(s)	325, 1453, 5172, 6136
BseYI	CCCAGC	6 cut(s)	315, 566, 1443, 1694, 2495, 4860
BsgI	GTGCAG	3 cut(s)	3471, 5241, 6363
Bsh1236I	CGCG	1 cut(s)	4784
BshNI	GGYRCC	1 cut(s)	3415
BshTI	ACCGGT	2 cut(s)	109, 1237
BshVI	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
BsiHKAI	GWGCWC	9 cut(s)	299, 967, 1427, 2095, 2896, 3999, 4653, 5477, 6136
BsiHKCI	CYCGRG	2 cut(s)	4188, 5348
BsiSI	CCGG	8 cut(s)	42, 110, 1170, 1238, 4419, 5499, 5933, 6217
BslFI	GGGAC	4 cut(s)	476, 1604, 3649, 5502
BslI	CCNNNNNNNGG	8 cut(s)	74, 366, 1202, 1494, 3905, 4222, 4408, 5798
BsmBI	CGTCTC	1 cut(s)	3774
BsmFI	GGGAC	4 cut(s)	476, 1604, 3649, 5502
BsmI	GAATGC	4 cut(s)	787, 1915, 2716, 4048
Bso31I	GGTCTC	5 cut(s)	159, 987, 1287, 2115, 2916
BsoBI	CYCGRG	2 cut(s)	4188, 5348
Bsp120I	GGGCCC	1 cut(s)	5168
Bsp1720I	GCTNAGC	4 cut(s)	268, 331, 1396, 1459
Bsp19I	CCATGG	8 cut(s)	281, 685, 756, 1409, 1813, 1884, 2614, 2685
BspDI	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
BspFNI	CGCG	1 cut(s)	4784
BspHI	TCATGA	7 cut(s)	772, 1900, 2701, 3928, 4833, 5556, 6300
BspMI	ACCTGC	1 cut(s)	4682
BspOI	GCTAGC	3 cut(s)	3833, 5099, 5205
BspPI	GGATC	4 cut(s)	3381, 3683, 5752, 5783
BspT107I	GGYRCC	1 cut(s)	3415
BspTI	CTTAAG	2 cut(s)	443, 1571
BspTNI	GGTCTC	5 cut(s)	159, 987, 1287, 2115, 2916
BsrBI	CCGCTC	6 cut(s)	99, 122, 330, 1227, 1250, 1458
BsrDI	GCAATG	3 cut(s)	3555, 4074, 5916
BsrFI	RCCGGY	4 cut(s)	109, 1237, 5498, 6216
BssAI	RCCGGY	4 cut(s)	109, 1237, 5498, 6216
Bst2UI	CCWGG	6 cut(s)	223, 311, 1351, 1439, 4513, 4929
Bst6I	CTCTTC	7 cut(s)	990, 2118, 2311, 2919, 3112, 4572, 4835
BstAFI	CTTAAG	2 cut(s)	443, 1571
BstAPI	GCANNNNNTGC	3 cut(s)	3404, 4067, 6131
BstBAI	YACGTR	3 cut(s)	780, 1908, 2709
BstDSI	CCRYGG	8 cut(s)	281, 685, 756, 1409, 1813, 1884, 2614, 2685
BstEII	GGTNACC	2 cut(s)	4391, 5927
BstENI	CCTNNNNNAGG	3 cut(s)	72, 1200, 3903
BstFNI	CGCG	1 cut(s)	4784
BstHHI	GCGC	1 cut(s)	4786
BstNI	CCWGG	6 cut(s)	223, 311, 1351, 1439, 4513, 4929
BstNSI	RCATGY	4 cut(s)	202, 1330, 4687, 4691
BstPAI	GACNNNNGTC	1 cut(s)	4265
BstPI	GGTNACC	2 cut(s)	4391, 5927
BstSCI	CCNGG	8 cut(s)	221, 309, 1349, 1437, 4418, 4511, 4927, 5931
BstSFI	CTRYAG	3 cut(s)	3318, 3694, 4263
BstSLI	GKGCMC	4 cut(s)	325, 1453, 5172, 6136
BstUI	CGCG	1 cut(s)	4784
BstX2I	RGATCY	5 cut(s)	216, 1344, 2297, 3098, 3688
BstXI	CCANNNNNNTGG	5 cut(s)	70, 692, 1198, 1820, 2621
BstYI	RGATCY	5 cut(s)	216, 1344, 2297, 3098, 3688
Bsu15I	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
Bsu36I	CCTNAGG	2 cut(s)	4294, 5670
BsuI	GTATCC	1 cut(s)	3278
BsuTUI	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
BtgI	CCRYGG	8 cut(s)	281, 685, 756, 1409, 1813, 1884, 2614, 2685
BtgZI	GCGATG	1 cut(s)	4208
BtrI	CACGTC	2 cut(s)	300, 1428
BtsI	GCAGTG	4 cut(s)	595, 1723, 2524, 5587
BveI	ACCTGC	1 cut(s)	4682
CciI	TCATGA	7 cut(s)	772, 1900, 2701, 3928, 4833, 5556, 6300
CfoI	GCGC	1 cut(s)	4786
Cfr10I	RCCGGY	4 cut(s)	109, 1237, 5498, 6216
ClaI	ATCGAT	4 cut(s)	627, 1755, 2556, 5020
CseI	GACGC	2 cut(s)	3835, 6176
CsiI	ACCWGGT	1 cut(s)	4927
CspAI	ACCGGT	2 cut(s)	109, 1237
DraI	TTTAAA	1 cut(s)	3745
DrdI	GACNNNNNNGTC	3 cut(s)	687, 1815, 2616
DseDI	GACNNNNNNGTC	3 cut(s)	687, 1815, 2616
EaeI	YGGCCR	5 cut(s)	43, 782, 1171, 1910, 2711
Eam1104I	CTCTTC	7 cut(s)	990, 2118, 2311, 2919, 3112, 4572, 4835
EarI	CTCTTC	7 cut(s)	990, 2118, 2311, 2919, 3112, 4572, 4835
Ecl136II	GAGCTC	2 cut(s)	4651, 5475
Eco147I	AGGCCT	2 cut(s)	4645, 5668
Eco24I	GRGCYC	7 cut(s)	269, 281, 1397, 1409, 4653, 5172, 5477
Eco31I	GGTCTC	5 cut(s)	159, 987, 1287, 2115, 2916
Eco32I	GATATC	1 cut(s)	5554
Eco47I	GGWCC	3 cut(s)	3636, 4204, 4588
Eco53kI	GAGCTC	2 cut(s)	4651, 5475
Eco57I	CTGAAG	3 cut(s)	3798, 3929, 6113
Eco72I	CACGTG	3 cut(s)	780, 1908, 2709
Eco81I	CCTNAGG	2 cut(s)	4294, 5670
Eco88I	CYCGRG	2 cut(s)	4188, 5348
Eco91I	GGTNACC	2 cut(s)	4391, 5927
EcoICRI	GAGCTC	2 cut(s)	4651, 5475
EcoNI	CCTNNNNNAGG	3 cut(s)	72, 1200, 3903
EcoO109I	RGGNCCY	5 cut(s)	1058, 2186, 2987, 4204, 5168
EcoO65I	GGTNACC	2 cut(s)	4391, 5927
EcoRII	CCWGG	6 cut(s)	221, 309, 1349, 1437, 4511, 4927
EcoRV	GATATC	1 cut(s)	5554
EcoT22I	ATGCAT	4 cut(s)	2394, 3195, 4689, 6364
EcoT38I	GRGCYC	7 cut(s)	269, 281, 1397, 1409, 4653, 5172, 5477
Esp3I	CGTCTC	1 cut(s)	3774
FaqI	GGGAC	4 cut(s)	476, 1604, 3649, 5502
FauI	CCCGC	4 cut(s)	104, 359, 1232, 1487
FauNDI	CATATG	2 cut(s)	3278, 5765
FblI	GTMKAC	1 cut(s)	3863
FriOI	GRGCYC	7 cut(s)	269, 281, 1397, 1409, 4653, 5172, 5477
GlaI	GCGC	1 cut(s)	4785
GsaI	CCCAGC	6 cut(s)	319, 570, 1447, 1698, 2499, 4864
GsuI	CTGGAG	3 cut(s)	391, 1519, 3564
HapII	CCGG	8 cut(s)	42, 110, 1170, 1238, 4419, 5499, 5933, 6217
HgaI	GACGC	2 cut(s)	3835, 6176
HhaI	GCGC	1 cut(s)	4786
Hin6I	GCGC	1 cut(s)	4784
HinP1I	GCGC	1 cut(s)	4784
HincII	GTYRAC	3 cut(s)	1051, 2179, 2980
HindII	GTYRAC	3 cut(s)	1051, 2179, 2980
HindIII	AAGCTT	1 cut(s)	5973
HpaII	CCGG	8 cut(s)	42, 110, 1170, 1238, 4419, 5499, 5933, 6217
Hpy166II	GTNNAC	9 cut(s)	680, 1051, 1808, 2179, 2609, 2980, 3864, 5446, 6134
Hpy8I	GTNNAC	9 cut(s)	680, 1051, 1808, 2179, 2609, 2980, 3864, 5446, 6134
Hpy99I	CGWCG	4 cut(s)	85, 241, 1213, 1369
HpyAV	CCTTC	9 cut(s)	144, 1272, 3283, 3582, 3726, 4226, 4907, 5797, 5850
HspAI	GCGC	1 cut(s)	4784
LweI	GCATC	7 cut(s)	862, 1990, 2791, 5176, 5926, 5950, 6279
MabI	ACCWGGT	1 cut(s)	4927
MbiI	CCGCTC	6 cut(s)	99, 122, 330, 1227, 1250, 1458
MflI	RGATCY	5 cut(s)	216, 1344, 2297, 3098, 3688
MlyI	GAGTC	7 cut(s)	5, 86, 247, 1133, 1214, 1375, 5554
Mph1103I	ATGCAT	4 cut(s)	2394, 3195, 4689, 6364
MspA1I	CMGCKG	4 cut(s)	566, 1694, 2495, 3311
MspCI	CTTAAG	2 cut(s)	443, 1571
MspI	CCGG	8 cut(s)	42, 110, 1170, 1238, 4419, 5499, 5933, 6217
MspR9I	CCNGG	8 cut(s)	223, 311, 1351, 1439, 4420, 4513, 4929, 5933
Mva1269I	GAATGC	4 cut(s)	787, 1915, 2716, 4048
MvaI	CCWGG	6 cut(s)	223, 311, 1351, 1439, 4513, 4929
MvnI	CGCG	1 cut(s)	4784
NciI	CCSGG	2 cut(s)	4420, 5933
NcoI	CCATGG	8 cut(s)	281, 685, 756, 1409, 1813, 1884, 2614, 2685
NdeI	CATATG	2 cut(s)	3278, 5765
NheI	GCTAGC	3 cut(s)	3829, 5095, 5201
NmeAIII	GCCGAG	1 cut(s)	3677
NsiI	ATGCAT	4 cut(s)	2394, 3195, 4689, 6364
NspI	RCATGY	4 cut(s)	202, 1330, 4687, 4691
OliI	CACNNNNGTG	2 cut(s)	68, 1196
PaeI	GCATGC	2 cut(s)	4687, 4691
PaeR7I	CTCGAG	1 cut(s)	4188
PagI	TCATGA	7 cut(s)	772, 1900, 2701, 3928, 4833, 5556, 6300
PaqCI	CACCTGC	1 cut(s)	4682
PceI	AGGCCT	2 cut(s)	4645, 5668
PciI	ACATGT	2 cut(s)	198, 1326
PctI	GAATGC	4 cut(s)	787, 1915, 2716, 4048
PflMI	CCANNNNNTGG	1 cut(s)	4408
PinAI	ACCGGT	2 cut(s)	109, 1237
PleI	GAGTC	7 cut(s)	5, 86, 247, 1133, 1214, 1375, 5554
PmaCI	CACGTG	3 cut(s)	780, 1908, 2709
PmlI	CACGTG	3 cut(s)	780, 1908, 2709
PpsI	GAGTC	7 cut(s)	5, 86, 247, 1133, 1214, 1375, 5554
Ppu21I	YACGTR	3 cut(s)	780, 1908, 2709
PpuMI	RGGWCCY	1 cut(s)	4204
PscI	ACATGT	2 cut(s)	198, 1326
PshAI	GACNNNNGTC	1 cut(s)	4265
PshBI	ATTAAT	1 cut(s)	3401
Psp124BI	GAGCTC	2 cut(s)	4653, 5477
Psp1406I	AACGTT	1 cut(s)	5620
Psp5II	RGGWCCY	1 cut(s)	4204
Psp6I	CCWGG	6 cut(s)	221, 309, 1349, 1437, 4511, 4927
PspCI	CACGTG	3 cut(s)	780, 1908, 2709
PspEI	GGTNACC	2 cut(s)	4391, 5927
PspFI	CCCAGC	6 cut(s)	315, 566, 1443, 1694, 2495, 4860
PspGI	CCWGG	6 cut(s)	221, 309, 1349, 1437, 4511, 4927
PspOMI	GGGCCC	1 cut(s)	5168
PspPPI	RGGWCCY	1 cut(s)	4204
PspXI	VCTCGAGB	1 cut(s)	4188
PsuI	RGATCY	5 cut(s)	216, 1344, 2297, 3098, 3688
PvuII	CAGCTG	4 cut(s)	566, 1694, 2495, 3311
SacI	GAGCTC	2 cut(s)	4653, 5477
ScaI	AGTACT	6 cut(s)	404, 917, 1532, 2045, 2846, 4800
SchI	GAGTC	7 cut(s)	5, 86, 247, 1133, 1214, 1375, 5554
ScrFI	CCNGG	8 cut(s)	223, 311, 1351, 1439, 4420, 4513, 4929, 5933
SexAI	ACCWGGT	1 cut(s)	4927
SfaNI	GCATC	7 cut(s)	862, 1990, 2791, 5176, 5926, 5950, 6279
SfcI	CTRYAG	3 cut(s)	3318, 3694, 4263
Sfr274I	CTCGAG	1 cut(s)	4188
SinI	GGWCC	3 cut(s)	3636, 4204, 4588
SlaI	CTCGAG	1 cut(s)	4188
SpeI	ACTAGT	3 cut(s)	797, 1925, 2726
SphI	GCATGC	2 cut(s)	4687, 4691
SseBI	AGGCCT	2 cut(s)	4645, 5668
SspI	AATATT	4 cut(s)	392, 1520, 3392, 5209
SstI	GAGCTC	2 cut(s)	4653, 5477
StuI	AGGCCT	2 cut(s)	4645, 5668
StyD4I	CCNGG	8 cut(s)	221, 309, 1349, 1437, 4418, 4511, 4927, 5931
TaqII	GACCGA	2 cut(s)	440, 1568
TatI	WGTACW	6 cut(s)	402, 915, 1530, 2043, 2844, 4798
TauI	GCSGC	3 cut(s)	787, 1915, 2716
TspGWI	ACGGA	2 cut(s)	4895, 5388
Van91I	CCANNNNNTGG	1 cut(s)	4408
Vha464I	CTTAAG	2 cut(s)	443, 1571
VneI	GTGCAC	1 cut(s)	6132
VpaK11BI	GGWCC	3 cut(s)	3636, 4204, 4588
VspI	ATTAAT	1 cut(s)	3401
XagI	CCTNNNNNAGG	3 cut(s)	72, 1200, 3903
XapI	RAATTY	8 cut(s)	577, 1705, 2397, 2506, 3198, 3740, 4287, 5690
XbaI	TCTAGA	1 cut(s)	6115
XceI	RCATGY	4 cut(s)	202, 1330, 4687, 4691
XhoI	CTCGAG	1 cut(s)	4188
XmiI	GTMKAC	1 cut(s)	3863
ZrmI	AGTACT	6 cut(s)	404, 917, 1532, 2045, 2846, 4800
Zsp2I	ATGCAT	4 cut(s)	2394, 3195, 4689, 6364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.