Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002129.1

Orthogroup ID

OG0017805

Physical Location & Seq

Genomic Coordinates Forward (+)

11481 .. 23099

Gene Structure 11619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002129.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

atgagtggcttcggcagaagaaaaacccaaagcaagcaaagagggacctcaagcaagcaaagagggaactcaagcaagcagtctcaagaggaactatggtctgtagacacagtgaagcagactttcagtgaattcttcaaaagaaagggatttgacatcttggagcctagtccggtcataccccagtacgatcaagctattaagtttcccaatgatggtatgaaccctatattttctggtaatgcacattcaagtgattcaagagcatgcaaccttcaaaaagttctgagaacacaatcaagcaagcatcacctatcagatattgggaaaaacacgtatcagcacacgtattttcagacacttgggatgtggcaatttgagggtcattactttaaagaagatgccattaaactagtttgggagctccttacaaaggtatataacttggaagaaacccaaatttatgtgacttattttagaggtgaagcacaacatcaacttcaatcatcagaggtacataagcttgttagtcttccttgtgatgtacgcactaaatccgcatgggatggtcttttaccaagtcaacatgttgtagctttgggtgcaaatgagaatttttgggagatgggagaagttggtccttgcggtccttgctcaaagatttattacaacagaggccatgctaaattggtggcaaatatggaagactcagattttgccaatatggaagactgtgactttgtggagatggccaacctcgtctttcttgagtacgaaaggggaaaaaatggcgtgcttacaaaattacttcatgatcatgttgatatgggtatgggattagaaaggttgacagccacactacaaggaaagcttgataattataaaactcctattttcacacccataattgaagccattagaatggaaacaaaggctcgccgatatttgggtaatgtcggatccgaagatcctgattatattgataccgcataccgagttattgctgaccatgtcagaggtatttgctttgccattgcagatggcaccaatccaggccttcatagccttagtggccatgtgctgaaaacaattctggatcgtgccgtctcttatggaagagacttcttgggagctaaggaagggtttctatcaagacttgtttgtaatttgatcccgagtgtatttccagagttagcacgatacaaagatgaaattatgaaaaaggtggtggaagcagagaaacaagtaactaagatttcactcgatgagattgaggaggccgttaaattatataattatctgaaaggggttagaagaaaagaactcatagatgatttgttcgacgagttttatttacccaaatcaacttttgctaatcacttgaggctcacgcttgaggagatcatacaaaaatcaatcaccacccagcaattgccttctttagtgagggctttcacttcatttgtacgaggctttttcacaagtgatgttacaagtaggattccgttggagtttcagttctttcttgatttcttggatgagaattgttgcaataaggtttctatgaagaatgctgtcaatcatccaattcttctcaacaaggaacaacggattctttatagatcagaagtgcaattaatgtgtgaagatgttggcgactctgaatatgatcgtttgttcttcataagggcgttattgtatgtcattcgtggtagaaatgcatctagtcattggatacgtactgttaatcaacgacatccgccatgtaattccaaaaattggattcaagatgcactttatccagatgagtttcgggataaagtcgagtacacagatgatgcaatgtcatttgtgaggttctgcagaaacataaacattcacaagtttcctacatgtcagagggacactatggaaggggaattgacgctaatttggcccggttttctttcactgcttcatgaggctgctattatgtgtggagttcatatcaacaaacttgctgctggaatcaatgcttcgaattgtgattttgtggggagcaagacggaagtggtttcgatatggcaggtttgttcaacaaaagttaggagggctatctgtgtgtgtcttgatatgaaaagatgcaggctgatttatcatttgcggatgaagcatgaccaaacgtttcacagtttaccaaaagagcagcacagagacagaaagagcaaaagtctggtagcataccatgaagttgggcacgccatctgtgggacattgactccagggcacgatgccgttcagaaagtgaccctagttccacgaggtcaagcacgtggtcttacatggttcattcctgcagatgattctaccttgatctccaagcagcaactatttgcaagaattgttggtgggcttggtggtagagcagcagaggaagtgatctttggtgagccagaggtgacaacaggtgcagctctggtgatttgcagcagattgttgctatcaaattcaagctgtttctgtttgttgctagttgactgctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0031406 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DHHA1 tRNA-synt_2c tRNA_SAD

Protein Analysis

840

Amino Acids

95.66

Weight (kDa)

7.53

Isoelectric Point (pI)

34.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017805)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr4g0417271
rosa_laevigata	RLG00000007920
rosa_multiflora	Rmu_sc0002129.1_g000003
rosa_rugosa	Rorug04G0146400 Rorug04G0146500.1
rosa_samantha	Rh2CG165800 Rh4AG209900 Rh4BG210400 Rh4BG210600 Rh4CG221100 Rh4DG208000
rosa_wichuraiana	Rw4G017750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	882
Acc36I	ACCTGC	1 cut(s)	2056
AccB1I	GGYRCC	1 cut(s)	1043
AccB7I	CCANNNNNTGG	1 cut(s)	1779
AccI	GTMKAC	1 cut(s)	105
AciI	CCGC	5 cut(s)	558, 645, 987, 1760, 2143
AclI	AACGTT	1 cut(s)	2162
AclWI	GGATC	5 cut(s)	954, 962, 967, 1104, 1165
AcoI	YGGCCR	2 cut(s)	750, 1072
AcsI	RAATTY	4 cut(s)	131, 459, 613, 2485
AcvI	CACGTG	1 cut(s)	2312
AfaI	GTAC	7 cut(s)	188, 516, 546, 773, 1467, 1741, 1829
AfiI	CCNNNNNNNGG	5 cut(s)	215, 433, 946, 1779, 2247
AflIII	ACRYGT	4 cut(s)	333, 345, 586, 1892
AgsI	TTSAA	9 cut(s)	139, 252, 261, 278, 503, 911, 1787, 2076, 2490
AhlI	ACTAGT	1 cut(s)	412
AjnI	CCWGG	2 cut(s)	1051, 2260
AjuI	GAANNNNNNNTTGG	2 cut(s)	2406, 2438
AloI	GAACNNNNNNTCC	2 cut(s)	1502, 1534
AluBI	AGCT	8 cut(s)	197, 424, 523, 596, 871, 1133, 2453, 2493
AluI	AGCT	8 cut(s)	197, 424, 523, 596, 871, 1133, 2453, 2493
Alw21I	GWGCWC	1 cut(s)	426
Alw26I	GTCTC	4 cut(s)	87, 1111, 1113, 2187
AlwI	GGATC	5 cut(s)	954, 962, 967, 1104, 1165
Ama87I	CYCGRG	1 cut(s)	1174
AoxI	GGCC	6 cut(s)	676, 750, 1054, 1072, 1278, 1934
ApeKI	GCWGC	7 cut(s)	1964, 2000, 2185, 2362, 2405, 2450, 2466
ApoI	RAATTY	4 cut(s)	131, 459, 613, 2485
ArsI	GACNNNNNNTTYG	4 cut(s)	698, 722, 730, 754
AseI	ATTAAT	1 cut(s)	1637
Asp700I	GAANNNNTTC	1 cut(s)	1143
AspS9I	GGNCC	4 cut(s)	45, 638, 647, 1935
AsuC2I	CCSGG	1 cut(s)	1938
AsuHPI	GGTGA	6 cut(s)	302, 494, 1411, 2438, 2449, 2470
AsuII	TTCGAA	1 cut(s)	2018
AvaI	CYCGRG	1 cut(s)	1174
AvaII	GGWCC	3 cut(s)	45, 638, 647
BaeGI	GKGCMC	2 cut(s)	2238, 2268
BalI	TGGCCA	2 cut(s)	752, 1074
BamHI	GGATCC	1 cut(s)	959
BanI	GGYRCC	1 cut(s)	1043
BanII	GRGCYC	1 cut(s)	426
BauI	CACGAG	1 cut(s)	2298
BbrPI	CACGTG	1 cut(s)	2312
BbsI	GAAGAC	3 cut(s)	524, 711, 735
Bbv12I	GWGCWC	1 cut(s)	426
BbvI	GCAGC	7 cut(s)	1951, 1987, 2197, 2374, 2417, 2462, 2478
BccI	CCATC	6 cut(s)	209, 560, 619, 742, 1034, 2249
BceAI	ACGGC	3 cut(s)	1088, 1265, 2258
BciT130I	CCWGG	2 cut(s)	1053, 2262
BciVI	GTATCC	1 cut(s)	1728
BclI	TGATCA	1 cut(s)	814
BcnI	CCSGG	1 cut(s)	1938
BcoDI	GTCTC	4 cut(s)	87, 1111, 1113, 2187
BcuI	ACTAGT	1 cut(s)	412
BfaI	CTAG	6 cut(s)	168, 413, 1725, 2291, 2510, 2521
BfmI	CTRYAG	3 cut(s)	102, 1861, 2334
BfuAI	ACCTGC	1 cut(s)	2056
BfuI	GTATCC	1 cut(s)	1728
BglI	GCCNNNNNGGC	1 cut(s)	1071
BisI	GCNGC	7 cut(s)	1965, 2001, 2186, 2363, 2406, 2451, 2467
BlsI	GCNGC	7 cut(s)	1966, 2002, 2187, 2364, 2407, 2452, 2468
Bme1390I	CCNGG	3 cut(s)	1053, 1938, 2262
Bme18I	GGWCC	3 cut(s)	45, 638, 647
BmeT110I	CYCGRG	1 cut(s)	1174
BmgT120I	GGNCC	4 cut(s)	45, 638, 647, 1935
BmiI	GGNNCC	4 cut(s)	46, 165, 961, 1045
BmrFI	CCNGG	3 cut(s)	1053, 1938, 2262
BmrI	ACTGGG	1 cut(s)	178
BmsI	GCATC	7 cut(s)	316, 391, 1730, 1780, 1828, 2111, 2260
BmuI	ACTGGG	1 cut(s)	178
BpiI	GAAGAC	3 cut(s)	524, 711, 735
BpmI	CTGGAG	1 cut(s)	2244
Bpu10I	CCTNAGC	1 cut(s)	1134
Bpu14I	TTCGAA	1 cut(s)	2018
BpuEI	CTTGAG	6 cut(s)	34, 55, 69, 788, 1402, 1415
BpuMI	CCSGG	1 cut(s)	1938
BsaAI	YACGTR	4 cut(s)	336, 348, 1739, 2312
BsaJI	CCNNGG	1 cut(s)	2261
BsaWI	WCCGGW	1 cut(s)	172
BsaXI	ACNNNNNCTCC	4 cut(s)	1502, 1532, 2242, 2272
Bsc4I	CCNNNNNNNGG	5 cut(s)	215, 433, 946, 1779, 2247
Bse1I	ACTGG	1 cut(s)	184
Bse3DI	GCAATG	2 cut(s)	1032, 1848
BseBI	CCWGG	2 cut(s)	1053, 2262
BseDI	CCNNGG	1 cut(s)	2261
BseGI	GGATG	6 cut(s)	372, 571, 1543, 1582, 1756, 2151
BseLI	CCNNNNNNNGG	5 cut(s)	215, 433, 946, 1779, 2247
BseMI	GCAATG	2 cut(s)	1032, 1848
BseMII	CTCAG	2 cut(s)	278, 723
BseNI	ACTGG	1 cut(s)	184
BseRI	GAGGAG	2 cut(s)	1289, 1412
BseSI	GKGCMC	2 cut(s)	2238, 2268
BseXI	GCAGC	7 cut(s)	1951, 1987, 2197, 2374, 2417, 2462, 2478
BseYI	CCCAGC	1 cut(s)	1425
BsgI	GTGCAG	1 cut(s)	2469
BshFI	GGCC	6 cut(s)	678, 752, 1056, 1074, 1280, 1936
BshNI	GGYRCC	1 cut(s)	1043
BsiHKAI	GWGCWC	1 cut(s)	426
BsiHKCI	CYCGRG	1 cut(s)	1174
BsiSI	CCGG	2 cut(s)	173, 1938
BslFI	GGGAC	3 cut(s)	58, 1916, 2263
BslI	CCNNNNNNNGG	5 cut(s)	215, 433, 946, 1779, 2247
BsmAI	GTCTC	4 cut(s)	87, 1111, 1113, 2187
BsmBI	CGTCTC	1 cut(s)	1111
BsmFI	GGGAC	3 cut(s)	58, 1916, 2263
BsmI	GAATGC	1 cut(s)	1576
BsnI	GGCC	6 cut(s)	678, 752, 1056, 1074, 1280, 1936
BsoBI	CYCGRG	1 cut(s)	1174
Bsp119I	TTCGAA	1 cut(s)	2018
Bsp1286I	GDGCHC	3 cut(s)	426, 2238, 2268
BspACI	CCGC	5 cut(s)	558, 645, 987, 1760, 2143
BspANI	GGCC	6 cut(s)	678, 752, 1056, 1074, 1280, 1936
BspCNI	CTCAG	2 cut(s)	279, 722
BspHI	TCATGA	2 cut(s)	811, 1957
BspLI	GGNNCC	4 cut(s)	46, 165, 961, 1045
BspMAI	CTGCAG	2 cut(s)	1865, 2338
BspMI	ACCTGC	1 cut(s)	2056
BspPI	GGATC	5 cut(s)	954, 962, 967, 1104, 1165
BspT104I	TTCGAA	1 cut(s)	2018
BspT107I	GGYRCC	1 cut(s)	1043
BsrDI	GCAATG	2 cut(s)	1032, 1848
BsrI	ACTGG	1 cut(s)	184
BssECI	CCNNGG	1 cut(s)	2261
BssSI	CACGAG	1 cut(s)	2298
Bst2BI	CACGAG	1 cut(s)	2298
Bst2UI	CCWGG	2 cut(s)	1053, 2262
Bst4CI	ACNGT	4 cut(s)	112, 734, 1744, 2171
Bst6I	CTCTTC	1 cut(s)	1111
BstBAI	YACGTR	4 cut(s)	336, 348, 1739, 2312
BstBI	TTCGAA	1 cut(s)	2018
BstC8I	GCNNGC	9 cut(s)	35, 56, 77, 268, 305, 794, 937, 2126, 2238
BstDEI	CTNAG	5 cut(s)	287, 709, 1067, 1134, 1251
BstENI	CCTNNNNNAGG	1 cut(s)	431
BstF5I	GGATG	6 cut(s)	372, 571, 1543, 1582, 1756, 2151
BstMAI	GTCTC	4 cut(s)	87, 1111, 1113, 2187
BstMWI	GCNNNNNNNGC	6 cut(s)	602, 651, 1062, 1071, 1933, 2149
BstNI	CCWGG	2 cut(s)	1053, 2262
BstNSI	RCATGY	3 cut(s)	270, 590, 1896
BstSCI	CCNGG	3 cut(s)	1051, 1936, 2260
BstSFI	CTRYAG	3 cut(s)	102, 1861, 2334
BstSLI	GKGCMC	2 cut(s)	2238, 2268
BstSNI	TACGTA	1 cut(s)	1739
BstV1I	GCAGC	7 cut(s)	1951, 1987, 2197, 2374, 2417, 2462, 2478
BstV2I	GAAGAC	3 cut(s)	524, 711, 735
BstX2I	RGATCY	2 cut(s)	959, 967
BstXI	CCANNNNNNTGG	2 cut(s)	922, 2231
BstYI	RGATCY	2 cut(s)	959, 967
BsuI	GTATCC	1 cut(s)	1728
BsuRI	GGCC	6 cut(s)	678, 752, 1056, 1074, 1280, 1936
BtsCI	GGATG	6 cut(s)	372, 571, 1543, 1582, 1756, 2151
BtsI	GCAGTG	1 cut(s)	1949
BtsIMutI	CAGTG	3 cut(s)	117, 133, 1949
BveI	ACCTGC	1 cut(s)	2056
Cac8I	GCNNGC	9 cut(s)	35, 56, 77, 268, 305, 794, 937, 2126, 2238
CciI	TCATGA	2 cut(s)	811, 1957
Cfr13I	GGNCC	4 cut(s)	45, 638, 647, 1935
CseI	GACGC	1 cut(s)	1933
Csp6I	GTAC	7 cut(s)	187, 515, 545, 772, 1466, 1740, 1828
CviQI	GTAC	7 cut(s)	187, 515, 545, 772, 1466, 1740, 1828
DdeI	CTNAG	5 cut(s)	287, 709, 1067, 1134, 1251
DraI	TTTAAA	1 cut(s)	394
EaeI	YGGCCR	2 cut(s)	750, 1072
Eam1104I	CTCTTC	1 cut(s)	1111
EarI	CTCTTC	1 cut(s)	1111
EciI	GGCGGA	1 cut(s)	1749
Ecl136II	GAGCTC	1 cut(s)	424
Eco105I	TACGTA	1 cut(s)	1739
Eco147I	AGGCCT	1 cut(s)	1056
Eco24I	GRGCYC	1 cut(s)	426
Eco47I	GGWCC	3 cut(s)	45, 638, 647
Eco53kI	GAGCTC	1 cut(s)	424
Eco72I	CACGTG	1 cut(s)	2312
Eco88I	CYCGRG	1 cut(s)	1174
EcoICRI	GAGCTC	1 cut(s)	424
EcoNI	CCTNNNNNAGG	1 cut(s)	431
EcoO109I	RGGNCCY	1 cut(s)	45
EcoRI	GAATTC	1 cut(s)	131
EcoRII	CCWGG	2 cut(s)	1051, 2260
EcoT22I	ATGCAT	1 cut(s)	1723
EcoT38I	GRGCYC	1 cut(s)	426
Esp3I	CGTCTC	1 cut(s)	1111
FalI	AAGNNNNNCTT	4 cut(s)	855, 887, 1779, 1811
FaqI	GGGAC	3 cut(s)	58, 1916, 2263
FbaI	TGATCA	1 cut(s)	814
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	7 cut(s)	1965, 2001, 2186, 2363, 2406, 2451, 2467
FokI	GGATG	6 cut(s)	379, 578, 1550, 1569, 1743, 2158
FriOI	GRGCYC	1 cut(s)	426
Fsp4HI	GCNGC	7 cut(s)	1965, 2001, 2186, 2363, 2406, 2451, 2467
FspBI	CTAG	6 cut(s)	168, 413, 1725, 2291, 2510, 2521
GluI	GCNGC	7 cut(s)	1965, 2001, 2186, 2363, 2406, 2451, 2467
GsaI	CCCAGC	1 cut(s)	1429
GsuI	CTGGAG	1 cut(s)	2244
HaeIII	GGCC	6 cut(s)	678, 752, 1056, 1074, 1280, 1936
HapII	CCGG	2 cut(s)	173, 1938
HgaI	GACGC	1 cut(s)	1933
HincII	GTYRAC	3 cut(s)	584, 849, 2515
HindII	GTYRAC	3 cut(s)	584, 849, 2515
HindIII	AAGCTT	2 cut(s)	521, 869
HinfI	GANTC	9 cut(s)	257, 707, 1501, 1612, 1658, 1783, 2007, 2257, 2342
HpaII	CCGG	2 cut(s)	173, 1938
HphI	GGTGA	6 cut(s)	302, 494, 1411, 2438, 2449, 2470
Hpy166II	GTNNAC	6 cut(s)	106, 584, 849, 1830, 2174, 2515
Hpy8I	GTNNAC	6 cut(s)	106, 584, 849, 1830, 2174, 2515
Hpy99I	CGWCG	1 cut(s)	1346
HpyAV	CCTTC	5 cut(s)	284, 1067, 1133, 1446, 1907
HpyCH4III	ACNGT	4 cut(s)	112, 734, 1744, 2171
HpyCH4IV	ACGT	5 cut(s)	335, 347, 1738, 2162, 2311
HpyF10VI	GCNNNNNNNGC	6 cut(s)	602, 651, 1062, 1071, 1933, 2149
HpyF3I	CTNAG	5 cut(s)	287, 709, 1067, 1134, 1251
HpySE526I	ACGT	5 cut(s)	335, 347, 1738, 2162, 2311
Ksp22I	TGATCA	1 cut(s)	814
LmnI	GCTCC	5 cut(s)	163, 421, 429, 1130, 2037
Lsp1109I	GCAGC	7 cut(s)	1951, 1987, 2197, 2374, 2417, 2462, 2478
LweI	GCATC	7 cut(s)	316, 391, 1730, 1780, 1828, 2111, 2260
MaeI	CTAG	6 cut(s)	168, 413, 1725, 2291, 2510, 2521
MaeII	ACGT	5 cut(s)	335, 347, 1738, 2162, 2311
MaeIII	GTNAC	6 cut(s)	466, 734, 1246, 1489, 2284, 2437
MfeI	CAATTG	1 cut(s)	1430
MflI	RGATCY	2 cut(s)	959, 967
MhlI	GDGCHC	3 cut(s)	426, 2238, 2268
MlsI	TGGCCA	2 cut(s)	752, 1074
MluNI	TGGCCA	2 cut(s)	752, 1074
MlyI	GAGTC	3 cut(s)	701, 1652, 2251
MmeI	TCCRAC	2 cut(s)	937, 1488
Mox20I	TGGCCA	2 cut(s)	752, 1074
Mph1103I	ATGCAT	1 cut(s)	1723
MroXI	GAANNNNTTC	1 cut(s)	1143
MscI	TGGCCA	2 cut(s)	752, 1074
MseI	TTAA	6 cut(s)	201, 393, 408, 1284, 1637, 1746
MslI	CAYNNNNRTG	3 cut(s)	252, 816, 920
Msp20I	TGGCCA	2 cut(s)	752, 1074
MspI	CCGG	2 cut(s)	173, 1938
MspR9I	CCNGG	3 cut(s)	1053, 1938, 2262
MunI	CAATTG	1 cut(s)	1430
Mva1269I	GAATGC	1 cut(s)	1576
MvaI	CCWGG	2 cut(s)	1053, 2262
MwoI	GCNNNNNNNGC	6 cut(s)	602, 651, 1062, 1071, 1933, 2149
NciI	CCSGG	1 cut(s)	1938
NlaIV	GGNNCC	4 cut(s)	46, 165, 961, 1045
NmuCI	GTSAC	4 cut(s)	466, 734, 2284, 2437
NsiI	ATGCAT	1 cut(s)	1723
NspI	RCATGY	3 cut(s)	270, 590, 1896
NspV	TTCGAA	1 cut(s)	2018
PaeI	GCATGC	1 cut(s)	270
PagI	TCATGA	2 cut(s)	811, 1957
PceI	AGGCCT	1 cut(s)	1056
PciI	ACATGT	2 cut(s)	586, 1892
PctI	GAATGC	1 cut(s)	1576
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	6 cut(s)	257, 1501, 1612, 1783, 2007, 2342
PflFI	GACNNNGTC	1 cut(s)	1010
PflMI	CCANNNNNTGG	1 cut(s)	1779
PkrI	GCNGC	7 cut(s)	1966, 2002, 2187, 2364, 2407, 2452, 2468
PleI	GAGTC	3 cut(s)	701, 1652, 2251
PmaCI	CACGTG	1 cut(s)	2312
PmlI	CACGTG	1 cut(s)	2312
PpsI	GAGTC	3 cut(s)	701, 1652, 2251
Ppu21I	YACGTR	4 cut(s)	336, 348, 1739, 2312
PpuMI	RGGWCCY	1 cut(s)	45
PscI	ACATGT	2 cut(s)	586, 1892
PshBI	ATTAAT	1 cut(s)	1637
PsiI	TTATAA	1 cut(s)	882
Psp124BI	GAGCTC	1 cut(s)	426
Psp1406I	AACGTT	1 cut(s)	2162
Psp5II	RGGWCCY	1 cut(s)	45
Psp6I	CCWGG	2 cut(s)	1051, 2260
PspCI	CACGTG	1 cut(s)	2312
PspFI	CCCAGC	1 cut(s)	1425
PspGI	CCWGG	2 cut(s)	1051, 2260
PspN4I	GGNNCC	4 cut(s)	46, 165, 961, 1045
PspPI	GGNCC	4 cut(s)	45, 638, 647, 1935
PspPPI	RGGWCCY	1 cut(s)	45
PstI	CTGCAG	2 cut(s)	1865, 2338
PsuI	RGATCY	2 cut(s)	959, 967
PsyI	GACNNNGTC	1 cut(s)	1010
RsaI	GTAC	7 cut(s)	188, 516, 546, 773, 1467, 1741, 1829
RsaNI	GTAC	7 cut(s)	187, 515, 545, 772, 1466, 1740, 1828
RseI	CAYNNNNRTG	3 cut(s)	252, 816, 920
SacI	GAGCTC	1 cut(s)	426
SaqAI	TTAA	6 cut(s)	201, 393, 408, 1284, 1637, 1746
SatI	GCNGC	7 cut(s)	1965, 2001, 2186, 2363, 2406, 2451, 2467
Sau96I	GGNCC	4 cut(s)	45, 638, 647, 1935
SchI	GAGTC	3 cut(s)	701, 1652, 2251
ScrFI	CCNGG	3 cut(s)	1053, 1938, 2262
SduI	GDGCHC	3 cut(s)	426, 2238, 2268
SfaNI	GCATC	7 cut(s)	316, 391, 1730, 1780, 1828, 2111, 2260
SfcI	CTRYAG	3 cut(s)	102, 1861, 2334
SfuI	TTCGAA	1 cut(s)	2018
SinI	GGWCC	3 cut(s)	45, 638, 647
SmiMI	CAYNNNNRTG	3 cut(s)	252, 816, 920
SmlI	CTYRAG	6 cut(s)	49, 70, 84, 767, 1381, 1394
SmoI	CTYRAG	6 cut(s)	49, 70, 84, 767, 1381, 1394
SnaBI	TACGTA	1 cut(s)	1739
SpeI	ACTAGT	1 cut(s)	412
SphI	GCATGC	1 cut(s)	270
SseBI	AGGCCT	1 cut(s)	1056
SsiI	CCGC	5 cut(s)	558, 645, 987, 1760, 2143
SspMI	CTAG	6 cut(s)	168, 413, 1725, 2291, 2510, 2521
SstI	GAGCTC	1 cut(s)	426
StuI	AGGCCT	1 cut(s)	1056
StyD4I	CCNGG	3 cut(s)	1051, 1936, 2260
TaaI	ACNGT	4 cut(s)	112, 734, 1744, 2171
TaiI	ACGT	5 cut(s)	338, 350, 1741, 2165, 2314
TaqI	TCGA	5 cut(s)	1263, 1341, 1824, 2018, 2057
TatI	WGTACW	1 cut(s)	1827
TfiI	GAWTC	6 cut(s)	257, 1501, 1612, 1783, 2007, 2342
Tru1I	TTAA	6 cut(s)	201, 393, 408, 1284, 1637, 1746
Tru9I	TTAA	6 cut(s)	201, 393, 408, 1284, 1637, 1746
TscAI	CASTG	3 cut(s)	117, 133, 1956
TseFI	GTSAC	4 cut(s)	466, 734, 2284, 2437
TseI	GCWGC	7 cut(s)	1964, 2000, 2185, 2362, 2405, 2450, 2466
Tsp45I	GTSAC	4 cut(s)	466, 734, 2284, 2437
TspGWI	ACGGA	3 cut(s)	1494, 1624, 2060
TspRI	CASTG	3 cut(s)	117, 133, 1956
Tth111I	GACNNNGTC	1 cut(s)	1010
Van91I	CCANNNNNTGG	1 cut(s)	1779
VpaK11BI	GGWCC	3 cut(s)	45, 638, 647
VspI	ATTAAT	1 cut(s)	1637
XagI	CCTNNNNNAGG	1 cut(s)	431
XapI	RAATTY	4 cut(s)	131, 459, 613, 2485
XceI	RCATGY	3 cut(s)	270, 590, 1896
XmiI	GTMKAC	1 cut(s)	105
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	6 cut(s)	168, 413, 1725, 2291, 2510, 2521
Zsp2I	ATGCAT	1 cut(s)	1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.