Rh2CG165800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
14821557 .. 14834244
12688 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG165800.1

Sequence Viewer

Length: 330 bp
ATGAATGGGCGTGCTTTTGTTGAAACAATTGCTCTACTACTTGCTTTCCTCAGTTGTCTGCCCTTGGAACTGTCAATTCCTACGAGGATTTTCTACGAAGTTGGTGGGAGGAGTATCCATAAAGTTGAGACTTTTGTTACTAGGTGTATTAACGGACCTCCGGAAATGCAGAATTTCAGAAAGGAGGCAGATGATGTAATTGCTATTGAAATCGATGCTTTGAACTGTGATTTTGTGGGGAACAAGACGGAAGTAGAGTTTGGAGAGGGTGACATGTTGGAGCAGGTGATAAAACAATTATATGCTCAAAGTTGCCCAAACTGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

109

Amino Acids

12.33

Weight (kDa)

4.69

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017805)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 1 cut(s) 274
AccIII TCCGGA 1 cut(s) 160
AcsI RAATTY 1 cut(s) 172
AflIII ACRYGT 1 cut(s) 273
AgsI TTSAA 3 cut(s) 23, 209, 223
AjuI GAANNNNNNNTTGG 2 cut(s) 243, 275
Alw26I GTCTC 1 cut(s) 122
Aor13HI TCCGGA 1 cut(s) 160
ApoI RAATTY 1 cut(s) 172
AspS9I GGNCC 1 cut(s) 155
AsuHPI GGTGA 2 cut(s) 281, 298
AvaII GGWCC 1 cut(s) 155
BciVI GTATCC 1 cut(s) 125
BcoDI GTCTC 1 cut(s) 122
BfaI CTAG 1 cut(s) 141
BfuAI ACCTGC 1 cut(s) 274
BfuI GTATCC 1 cut(s) 125
Bme18I GGWCC 1 cut(s) 155
BmgT120I GGNCC 1 cut(s) 155
BmsI GCATC 1 cut(s) 205
Bsa29I ATCGAT 1 cut(s) 213
BsaJI CCNNGG 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 160
Bse1I ACTGG 1 cut(s) 326
BseAI TCCGGA 1 cut(s) 160
BseCI ATCGAT 1 cut(s) 213
BseDI CCNNGG 1 cut(s) 63
BseMII CTCAG 1 cut(s) 64
BseNI ACTGG 1 cut(s) 326
BseRI GAGGAG 1 cut(s) 124
BshVI ATCGAT 1 cut(s) 213
BsiSI CCGG 1 cut(s) 161
BsmAI GTCTC 1 cut(s) 122
Bsp13I TCCGGA 1 cut(s) 160
BspCNI CTCAG 1 cut(s) 63
BspDI ATCGAT 1 cut(s) 213
BspEI TCCGGA 1 cut(s) 160
BspMI ACCTGC 1 cut(s) 274
BsrI ACTGG 1 cut(s) 326
BssECI CCNNGG 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 63
Bst4CI ACNGT 2 cut(s) 72, 227
BstC8I GCNNGC 1 cut(s) 12
BstDEI CTNAG 1 cut(s) 50
BstMAI GTCTC 1 cut(s) 122
BstNSI RCATGY 1 cut(s) 277
Bsu15I ATCGAT 1 cut(s) 213
BsuI GTATCC 1 cut(s) 125
BsuTUI ATCGAT 1 cut(s) 213
BveI ACCTGC 1 cut(s) 274
Cac8I GCNNGC 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 155
ClaI ATCGAT 1 cut(s) 213
CviAII CATG 1 cut(s) 274
DdeI CTNAG 1 cut(s) 50
Eco130I CCWWGG 1 cut(s) 63
Eco47I GGWCC 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 1 cut(s) 277
FaiI YATR 4 cut(s) 120, 275, 301, 303
FatI CATG 1 cut(s) 273
FspBI CTAG 1 cut(s) 141
HapII CCGG 1 cut(s) 161
Hin1II CATG 1 cut(s) 277
HpaII CCGG 1 cut(s) 161
HphI GGTGA 2 cut(s) 281, 298
Hpy188I TCNGA 1 cut(s) 179
Hpy188III TCNNGA 1 cut(s) 161
HpyCH4III ACNGT 2 cut(s) 72, 227
HpyCH4V TGCA 1 cut(s) 169
HpyF3I CTNAG 1 cut(s) 50
Hsp92II CATG 1 cut(s) 277
Kpn2I TCCGGA 1 cut(s) 160
LmnI GCTCC 1 cut(s) 280
LpnPI CCDG 3 cut(s) 174, 269, 307
LweI GCATC 1 cut(s) 205
MaeI CTAG 1 cut(s) 141
MaeIII GTNAC 2 cut(s) 136, 269
MfeI CAATTG 1 cut(s) 27
MluCI AATT 5 cut(s) 27, 75, 172, 198, 296
MmeI TCCRAC 1 cut(s) 258
MnlI CCTC 6 cut(s) 59, 78, 102, 168, 178, 259
MroI TCCGGA 1 cut(s) 160
MseI TTAA 1 cut(s) 150
MspI CCGG 1 cut(s) 161
MunI CAATTG 1 cut(s) 27
NlaIII CATG 1 cut(s) 277
NmuCI GTSAC 1 cut(s) 269
NspI RCATGY 1 cut(s) 277
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 1 cut(s) 273
PscI ACATGT 1 cut(s) 273
PspPI GGNCC 1 cut(s) 155
SaqAI TTAA 1 cut(s) 150
Sau96I GGNCC 1 cut(s) 155
SetI ASST 3 cut(s) 146, 160, 288
SfaNI GCATC 1 cut(s) 205
SgeI CNNG 9 cut(s) 23, 53, 76, 96, 153, 173, 256, 286, 296
SinI GGWCC 1 cut(s) 155
Sse9I AATT 5 cut(s) 27, 75, 172, 198, 296
SspMI CTAG 1 cut(s) 141
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 2 cut(s) 72, 227
TaqI TCGA 1 cut(s) 213
TasI AATT 5 cut(s) 27, 75, 172, 198, 296
Tru1I TTAA 1 cut(s) 150
Tru9I TTAA 1 cut(s) 150
TseFI GTSAC 1 cut(s) 269
Tsp45I GTSAC 1 cut(s) 269
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 168, 263
VpaK11BI GGWCC 1 cut(s) 155
XapI RAATTY 1 cut(s) 172
XceI RCATGY 1 cut(s) 277
XspI CTAG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.