Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002193.1

Orthogroup ID

OG0010745

Physical Location & Seq

Genomic Coordinates Forward (+)

7835 .. 12237

Gene Structure 4403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002193.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4290 bp

atgggaggcgattcgggtaatgcgaaattgttgaatgagattgagactataagcaaagccctatacgcaggcaaaaggcactctaggagtaatagttcaatttctacagggagtaatgcgtcgaaaactcaggggaagaaccttttgcctgatccaaaatcgaagcctaagtcgggtggggagaactcattgcttaaagagaagaggtcattttggaattggaagcccctgaaggcatttagccatatccgaaactgtaggtttaactgctgcttttctctcgaagttcattccatcgaagggttgccgtcgaatttgaacggcattagtctctgtgtgcattggaagaggagggatgggattttcgttactagtccaatgaaggttgttcaaggcgtggcaaaatttgaggagaaattgactcacacatgctctgtgtacggtagtaggagcgggccccatcattcggcaaagtatgaggcaaagcatttcttgctatatgcttctgtgtttggtgcaccggaacttgatttggggaagcatagggttgatctcactaggttgcttcctctgacattggaggaattagaggaggagaagagctcagggaactggacaacgagttttaaactgtcaggaaaggctaagggtgcaacacttaatgttagttttgggtatacggtgcttaaggataattccactgcatcaagaaatagccagaatgctcctgagggggtcatttcgaggcagagtagctcgagtttggcaaaagcagggaccaaatatggtcgggttgattccaggacaactatgcagcgtggtgaaagtcttcctaattcgcgctcaagggcctcatctcgctccgtagaggacataagggatcttcacgaggttttaccaatatcaaagtcggaactttccagttcagttaatgtgctctatgagaaatttgatgaagaagagaagtcgggcactccagctgtttacaagcctgaacttgaagtgctcaccgagactgttgagtccataaagacgacttccttcccctcgcctgtttctagtaaagtaacagtagaggatgagtgtgaagaggatgacttttctgtagttgagcaggggatagaactgccatcaaaggaagtgatggaaccagaaattattacagaggctactgatgcttctgcatcaggaaaggctaaaggtgcaacacttaatgttagttttgggtatacggtgcttaaggataattccactgcatcaagaaatagccagaatgctcctgagggggtgatttcgaggcagagtagctcgagtttggcaaaagcagggaccaaatatggtcaggttgattccaggacaactatgcagcgtggtgaaagtcttcctaattcgcgctcaagggcctcatctcgctccgtagaggacataagggatcttcacgaggttttaccaatatcaaagtcggaactttccagttcagttaatgtgctctatcagaaatttgatgaagaagagaagtcgggcactccagctgtttacaagcctgaacttgaagtgctcaccgagactgttgagtccataaagacgacttccttcccctcgcctgtttctagtaaagtaacagtagaggatgagtgtgaagaggatgacttttctgtagttgagcaggggatagaactgccatcaaaggaagtgatggaaccagaaattattacagaggctactgatgcttctgcagcagaaggtcatgttactgaaatcaccactggacaggtagcagctgaagaaggaaatgaggtccattcccaggttgagggacagggtggttgtatggatggacttgtggtatgtaattctagttccaaagaagatggcttatgcaccaaagaatcacttatgaaagccataaagacgacttccttcccctcgcctgtttctagtaaagtaacagtagaggatgagtgtgaagaggatgacttttctgtagttgagcaggggatagaactgccatcaaaggaagtgatggaaccagaaattattacagaggctattgatgcttcttcagcagaaggtcatgttgctgaaatcaccactggacaggtagcagctgaagaaggaaatgaggtccattcccaggttgaggaacaaggtggttgtatggatggacttgtggtatgtaattctagttccaaagaagatggcttatgcaccaaagaatcacttatgaaagacctagagtcggctttaagtattgtgtcagatttggaggcagcaggactagaatctcctgaacacctaaaatgttatgtagatgataaactatataaaagaaatatgatggggagtccatgtagcatggatgatgttacagaaaatgagttcttgagcatgctagggatagagcaaagtccatcttgcattagctttgagagtgaacctgagtctccaagagagcgtctgctaagacagtttgagaaggagacactcgccgcgggttgttctttgtttgatgaatttgacatagtaaccgatgaccaagcagaatgcagctacagtgatgcagctgggtctgattgggaccacctatctgagagttttgatctttctgccatgattcaagctgcagaggaggagcatcagatggcagctcaaccagcaaggagtaaagcaaaggccaaaatgttggaagacttggagacagaagcattaatgcgtgagtggggtttgaatgagatggcgtttcagcattcttccccaaaaagctctcatggttttggaagtccattagattcacctcttgaagatccacttgaactgcctccccttggagaaggcataggcccttttcttcagacaaagaatggaggatttgtacggtcaatgaaccccacacttttcaaaaatgctaaaagtggcggtgacttgatcatgcaggtttctagccccgttgtggtaccagcagaaatgggctctggggtaatggatatattgcagcatttggcatcagtcggaatcgaaaagctttctatgcaggcaaataagttaatgcccttggaagatattactggaaagacgatggagcaagtagcatgggaagctgtgcctgctttggaaggacctcagagggattgtatctcgcagcatgaatcagttgttgggcaagatgtaccagatgggcgaacaagagtcgaaggaagttcatctgggcccaagtctaagaagtctaagaaaaacacagttggcgatgagatggcctcagaatatgtttctttagaagatcttgcacctctagccatggataaaattgaagcactttcaattgaggggttgagaatacaatccgggatgtcaaatgtggatgaaccttcaagcattagcacagagtctgttgcgcaaaacccagctctccagggcaagggtgttaatgttggtgaactccttggtttggagggagctgctggattgcagttgctggacataaaagatggtggtaatgatgttgatggactaatgggcctttcattaactcttgatgaatggatgaaacttgattctggtgagattgatgatgaagatcatattagtgagagaactacccaaatccttgctgctcatcatgcaaactctttggacatgattcgcggggggtcgaagggagagagaaggcgtggtaaaggagcaagaaagtgtggtttactggggaataatttcacagtagcattgatggtgcaacttcgtgatccactaagaaactatgagcctgttggggctccaatgcttgctcttattcaagttgagagagtgtttctcccaccaaagcccaagatttacagcacagtttctgtactaaggaaaagtaatgaagaggatgatgagtctgggtcagtggtgaaagaggacatcaaagaggagaaaaaagatgagaaacttcctgaagaggaagctattcctcagtttaaaatcactgaagtccacgtcgctggtctgaaaacggagcccggaaaaaagaagctatggggtaatacaaaccagcaacaatcaggttcccgctggttgcttgctaatggaatggggaaaaacaataagcatccatttttgaagtcaaaggccaaggctgctccgaaatcttctacttcagcaacaacaaaggtgcagcctggtgatacgttgtggagcatctctgctcgtgttcatggcgatggatcaaaatggaaggaattggcagctctaaatccgcatataaggaaccccaatgttatcttaccaaatgaaactatcagattgtgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006810 GO:0006928 GO:0006996 GO:0007097 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009987 GO:0016043 GO:0019750 GO:0030029 GO:0030048 GO:0030705 GO:0031022 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051647 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0099515

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM NT-C2

Protein Analysis

1429

Amino Acids

155.03

Weight (kDa)

4.93

Isoelectric Point (pI)

51.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20610
fragaria_vesca	FvH4_1g08130
malus_domestica	MD02G1085800.v1.1 MD15G1213000.v1.1
prunus_persica	Prupe.7G203900_v2.0.a1
pyrus_communis	pycom02g06870 pycom02g06880 pycom15g18930 pycom15g18940
rosa_chinensis	RchiOBHm_Chr2g0094181
rosa_laevigata	RLG00000016463
rosa_multiflora	Rmu_sc0002193.1_g000003 Rmu_sc0013176.1_g000002
rosa_roxburghii	Rroxscaffold_2G00147410
rosa_rugosa	Rorug02G0041600 Rorug02G0041700
rosa_samantha	Rh2AG089300 Rh2BG089400 Rh2CG091900 Rh2DG088400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1021, 1573
Acc16I	TGCGCA	1 cut(s)	3393
Acc36I	ACCTGC	1 cut(s)	2923
Acc65I	GGTACC	1 cut(s)	2953
AccB1I	GGYRCC	1 cut(s)	2953
AccBSI	CCGCTC	1 cut(s)	453
AccI	GTMKAC	2 cut(s)	677, 1229
AccII	CGCG	4 cut(s)	841, 1393, 2492, 3642
AciI	CCGC	7 cut(s)	453, 2490, 2492, 2916, 3642, 4048, 4235
AclWI	GGATC	6 cut(s)	146, 888, 1440, 2798, 3734, 4210
AcsI	RAATTY	5 cut(s)	313, 404, 947, 1499, 2513
AcuI	CTGAAG	8 cut(s)	251, 1803, 2046, 2130, 2834, 3954, 3987, 4119
AfaI	GTAC	5 cut(s)	440, 2874, 2955, 3168, 3846
AflII	CTTAAG	2 cut(s)	686, 1238
AhdI	GACNNNNNGTC	1 cut(s)	2236
AhlI	ACTAGT	1 cut(s)	371
AjiI	CACGTC	1 cut(s)	3976
AjnI	CCWGG	6 cut(s)	800, 1352, 1806, 2133, 3408, 4156
AjuI	GAANNNNNNNTTGG	2 cut(s)	3138, 3170
AloI	GAACNNNNNNTCC	2 cut(s)	79, 111
Alw21I	GWGCWC	6 cut(s)	520, 605, 939, 1008, 1491, 1560
Alw26I	GTCTC	7 cut(s)	38, 335, 1007, 1559, 2448, 2474, 2690
Alw44I	GTGCAC	1 cut(s)	516
AlwI	GGATC	6 cut(s)	146, 888, 1440, 2798, 3734, 4210
AlwNI	CAGNNNCTG	3 cut(s)	3386, 3472, 3842
Ama87I	CYCGRG	2 cut(s)	757, 1309
AoxI	GGCC	9 cut(s)	455, 849, 1401, 2673, 2839, 3206, 3252, 3514, 4107
ApaI	GGGCCC	2 cut(s)	459, 3210
ApaLI	GTGCAC	1 cut(s)	516
ApoI	RAATTY	5 cut(s)	313, 404, 947, 1499, 2513
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AseI	ATTAAT	1 cut(s)	2708
Asp700I	GAANNNNTTC	4 cut(s)	828, 1380, 3707, 3945
Asp718I	GGTACC	1 cut(s)	2953
AspLEI	GCGC	3 cut(s)	843, 1395, 3394
AsuC2I	CCSGG	2 cut(s)	3343, 3999
AvaI	CYCGRG	2 cut(s)	757, 1309
AvaII	GGWCC	6 cut(s)	777, 1329, 1798, 2125, 2578, 3116
AxyI	CCTNAGG	2 cut(s)	729, 1281
BaeGI	GKGCMC	5 cut(s)	459, 520, 974, 1526, 3210
BanI	GGYRCC	1 cut(s)	2953
BanII	GRGCYC	6 cut(s)	459, 605, 2972, 3210, 3772, 3999
BauI	CACGAG	3 cut(s)	887, 1439, 4185
BbsI	GAAGAC	3 cut(s)	821, 1373, 2694
Bbv12I	GWGCWC	6 cut(s)	520, 605, 939, 1008, 1491, 1560
BceAI	ACGGC	2 cut(s)	292, 337
BciT130I	CCWGG	6 cut(s)	802, 1354, 1808, 2135, 3410, 4158
BclI	TGATCA	1 cut(s)	2925
BcnI	CCSGG	2 cut(s)	3343, 3999
BcoDI	GTCTC	7 cut(s)	38, 335, 1007, 1559, 2448, 2474, 2690
BcuI	ACTAGT	1 cut(s)	371
BfmI	CTRYAG	8 cut(s)	105, 256, 1104, 1656, 1734, 1983, 2551, 2622
BfrI	CTTAAG	2 cut(s)	686, 1238
BfuAI	ACCTGC	1 cut(s)	2923
BglII	AGATCT	1 cut(s)	3277
Bme1390I	CCNGG	8 cut(s)	802, 1354, 1808, 2135, 3343, 3410, 3999, 4158
Bme18I	GGWCC	6 cut(s)	777, 1329, 1798, 2125, 2578, 3116
BmeRI	GACNNNNNGTC	1 cut(s)	2236
BmeT110I	CYCGRG	2 cut(s)	757, 1309
BmgBI	CACGTC	1 cut(s)	3976
BmrFI	CCNGG	8 cut(s)	802, 1354, 1808, 2135, 3343, 3410, 3999, 4158
BmrI	ACTGGG	1 cut(s)	3707
BmuI	ACTGGG	1 cut(s)	3707
BpiI	GAAGAC	3 cut(s)	821, 1373, 2694
BplI	GAGNNNNNCTC	6 cut(s)	587, 619, 3239, 3271, 3792, 3824
BpmI	CTGGAG	3 cut(s)	960, 1512, 3392
Bpu10I	CCTNAGC	2 cut(s)	604, 645
BpuEI	CTTGAG	3 cut(s)	829, 1381, 2404
BpuMI	CCSGG	2 cut(s)	3343, 3999
BsaBI	GATNNNNATC	1 cut(s)	3573
BsaJI	CCNNGG	9 cut(s)	1806, 2133, 2490, 2824, 3051, 3294, 3409, 3439, 4110
BsaWI	WCCGGW	1 cut(s)	520
BsaXI	ACNNNNNCTCC	6 cut(s)	79, 109, 2335, 2365, 2856, 2886
Bse1I	ACTGG	7 cut(s)	617, 921, 1473, 1771, 2098, 3070, 3702
Bse21I	CCTNAGG	2 cut(s)	729, 1281
Bse3DI	GCAATG	1 cut(s)	188
Bse8I	GATNNNNATC	1 cut(s)	3573
BseBI	CCWGG	6 cut(s)	802, 1354, 1808, 2135, 3410, 4158
BseDI	CCNNGG	9 cut(s)	1806, 2133, 2490, 2824, 3051, 3294, 3409, 3439, 4110
BseJI	GATNNNNATC	1 cut(s)	3573
BseMI	GCAATG	1 cut(s)	188
BseMII	CTCAG	9 cut(s)	143, 618, 720, 1272, 2430, 2580, 3134, 3270, 3965
BseNI	ACTGG	7 cut(s)	617, 921, 1473, 1771, 2098, 3070, 3702
BseRI	GAGGAG	7 cut(s)	364, 425, 605, 608, 2642, 2645, 3923
BseSI	GKGCMC	5 cut(s)	459, 520, 974, 1526, 3210
BseYI	CCCAGC	2 cut(s)	2564, 3400
BsgI	GTGCAG	1 cut(s)	4172
Bsh1236I	CGCG	4 cut(s)	841, 1393, 2492, 3642
BshFI	GGCC	9 cut(s)	457, 851, 1403, 2675, 2841, 3208, 3254, 3516, 4109
BshNI	GGYRCC	1 cut(s)	2953
BsiHKAI	GWGCWC	6 cut(s)	520, 605, 939, 1008, 1491, 1560
BsiHKCI	CYCGRG	2 cut(s)	757, 1309
BsiSI	CCGG	3 cut(s)	521, 3342, 3999
BslFI	GGGAC	4 cut(s)	790, 1342, 1830, 2591
BsmAI	GTCTC	7 cut(s)	38, 335, 1007, 1559, 2448, 2474, 2690
BsmFI	GGGAC	4 cut(s)	790, 1342, 1830, 2591
BsmI	GAATGC	4 cut(s)	727, 1279, 2549, 2746
BsnI	GGCC	9 cut(s)	457, 851, 1403, 2675, 2841, 3208, 3254, 3516, 4109
BsoBI	CYCGRG	2 cut(s)	757, 1309
Bsp120I	GGGCCC	2 cut(s)	455, 3206
Bsp19I	CCATGG	1 cut(s)	3294
BspACI	CCGC	7 cut(s)	453, 2490, 2492, 2916, 3642, 4048, 4235
BspANI	GGCC	9 cut(s)	457, 851, 1403, 2675, 2841, 3208, 3254, 3516, 4109
BspCNI	CTCAG	9 cut(s)	142, 617, 721, 1273, 2431, 2581, 3133, 3269, 3964
BspFNI	CGCG	4 cut(s)	841, 1393, 2492, 3642
BspMAI	CTGCAG	2 cut(s)	1738, 2626
BspMI	ACCTGC	1 cut(s)	2923
BspPI	GGATC	6 cut(s)	146, 888, 1440, 2798, 3734, 4210
BspQI	GCTCTTC	1 cut(s)	593
BspT107I	GGYRCC	1 cut(s)	2953
BspTI	CTTAAG	2 cut(s)	686, 1238
BsrBI	CCGCTC	1 cut(s)	453
BsrDI	GCAATG	1 cut(s)	188
BsrI	ACTGG	7 cut(s)	617, 921, 1473, 1771, 2098, 3070, 3702
BssECI	CCNNGG	9 cut(s)	1806, 2133, 2490, 2824, 3051, 3294, 3409, 3439, 4110
BssNAI	GTATAC	2 cut(s)	678, 1230
BssSI	CACGAG	3 cut(s)	887, 1439, 4185
BssT1I	CCWWGG	5 cut(s)	2824, 3051, 3294, 3439, 4110
Bst1107I	GTATAC	2 cut(s)	678, 1230
Bst2BI	CACGAG	3 cut(s)	887, 1439, 4185
Bst2UI	CCWGG	6 cut(s)	802, 1354, 1808, 2135, 3410, 4158
BstAFI	CTTAAG	2 cut(s)	686, 1238
BstAPI	GCANNNNNTGC	1 cut(s)	493
BstC8I	GCNNGC	7 cut(s)	70, 455, 2390, 3033, 3105, 3780, 4059
BstDSI	CCRYGG	2 cut(s)	2490, 3294
BstFNI	CGCG	4 cut(s)	841, 1393, 2492, 3642
BstHHI	GCGC	3 cut(s)	843, 1395, 3394
BstMAI	GTCTC	7 cut(s)	38, 335, 1007, 1559, 2448, 2474, 2690
BstNI	CCWGG	6 cut(s)	802, 1354, 1808, 2135, 3410, 4158
BstNSI	RCATGY	2 cut(s)	432, 2392
BstSCI	CCNGG	8 cut(s)	800, 1352, 1806, 2133, 3341, 3408, 3997, 4156
BstSFI	CTRYAG	8 cut(s)	105, 256, 1104, 1656, 1734, 1983, 2551, 2622
BstSLI	GKGCMC	5 cut(s)	459, 520, 974, 1526, 3210
BstUI	CGCG	4 cut(s)	841, 1393, 2492, 3642
BstV2I	GAAGAC	3 cut(s)	821, 1373, 2694
BstX2I	RGATCY	4 cut(s)	880, 1432, 2803, 3277
BstXI	CCANNNNNNTGG	2 cut(s)	2683, 3980
BstYI	RGATCY	4 cut(s)	880, 1432, 2803, 3277
BstZ17I	GTATAC	2 cut(s)	678, 1230
Bsu36I	CCTNAGG	2 cut(s)	729, 1281
BsuRI	GGCC	9 cut(s)	457, 851, 1403, 2675, 2841, 3208, 3254, 3516, 4109
BtgI	CCRYGG	2 cut(s)	2490, 3294
BtgZI	GCGATG	2 cut(s)	3258, 4212
BtrI	CACGTC	1 cut(s)	3976
BtsI	GCAGTG	2 cut(s)	699, 1251
BtsIMutI	CAGTG	7 cut(s)	699, 1251, 1764, 2091, 2560, 3891, 3963
BveI	ACCTGC	1 cut(s)	2923
Cac8I	GCNNGC	7 cut(s)	70, 455, 2390, 3033, 3105, 3780, 4059
CaiI	CAGNNNCTG	3 cut(s)	3386, 3472, 3842
CfoI	GCGC	3 cut(s)	843, 1395, 3394
Cfr42I	CCGCGG	1 cut(s)	2493
CseI	GACGC	2 cut(s)	108, 2444
Csp6I	GTAC	5 cut(s)	439, 2873, 2954, 3167, 3845
CviQI	GTAC	5 cut(s)	439, 2873, 2954, 3167, 3845
DraI	TTTAAA	2 cut(s)	628, 3958
DrdI	GACNNNNNNGTC	2 cut(s)	1021, 1573
DriI	GACNNNNNGTC	1 cut(s)	2236
DseDI	GACNNNNNNGTC	2 cut(s)	1021, 1573
Eam1105I	GACNNNNNGTC	1 cut(s)	2236
Ecl136II	GAGCTC	1 cut(s)	603
Eco130I	CCWWGG	5 cut(s)	2824, 3051, 3294, 3439, 4110
Eco24I	GRGCYC	6 cut(s)	459, 605, 2972, 3210, 3772, 3999
Eco47I	GGWCC	6 cut(s)	777, 1329, 1798, 2125, 2578, 3116
Eco53kI	GAGCTC	1 cut(s)	603
Eco57I	CTGAAG	8 cut(s)	251, 1803, 2046, 2130, 2834, 3954, 3987, 4119
Eco81I	CCTNAGG	2 cut(s)	729, 1281
Eco88I	CYCGRG	2 cut(s)	757, 1309
EcoICRI	GAGCTC	1 cut(s)	603
EcoO109I	RGGNCCY	5 cut(s)	456, 849, 1401, 2840, 3116
EcoRII	CCWGG	6 cut(s)	800, 1352, 1806, 2133, 3408, 4156
EcoT14I	CCWWGG	5 cut(s)	2824, 3051, 3294, 3439, 4110
EcoT38I	GRGCYC	6 cut(s)	459, 605, 2972, 3210, 3772, 3999
ErhI	CCWWGG	5 cut(s)	2824, 3051, 3294, 3439, 4110
FaqI	GGGAC	4 cut(s)	790, 1342, 1830, 2591
FauI	CCCGC	4 cut(s)	446, 2485, 3635, 4055
FbaI	TGATCA	1 cut(s)	2925
FblI	GTMKAC	2 cut(s)	677, 1229
FriOI	GRGCYC	6 cut(s)	459, 605, 2972, 3210, 3772, 3999
FspI	TGCGCA	1 cut(s)	3393
GlaI	GCGC	3 cut(s)	842, 1394, 3393
GsaI	CCCAGC	2 cut(s)	2568, 3404
GsuI	CTGGAG	3 cut(s)	960, 1512, 3392
HaeIII	GGCC	9 cut(s)	457, 851, 1403, 2675, 2841, 3208, 3254, 3516, 4109
HapII	CCGG	3 cut(s)	521, 3342, 3999
HgaI	GACGC	2 cut(s)	108, 2444
HhaI	GCGC	3 cut(s)	843, 1395, 3394
Hin6I	GCGC	3 cut(s)	841, 1393, 3392
HinP1I	GCGC	3 cut(s)	841, 1393, 3392
HindIII	AAGCTT	1 cut(s)	3020
HpaII	CCGG	3 cut(s)	521, 3342, 3999
Hpy99I	CGWCG	3 cut(s)	124, 313, 3980
HpyCH4IV	ACGT	2 cut(s)	3975, 4166
HpySE526I	ACGT	2 cut(s)	3975, 4166
HspAI	GCGC	3 cut(s)	841, 1393, 3392
KpnI	GGTACC	1 cut(s)	2957
Ksp22I	TGATCA	1 cut(s)	2925
KspI	CCGCGG	1 cut(s)	2493
LguI	GCTCTTC	1 cut(s)	593
MaeII	ACGT	2 cut(s)	3975, 4166
MaeIII	GTNAC	8 cut(s)	367, 1066, 1618, 1750, 1945, 2365, 2524, 2918
MbiI	CCGCTC	1 cut(s)	453
MfeI	CAATTG	1 cut(s)	3318
MflI	RGATCY	4 cut(s)	880, 1432, 2803, 3277
MlyI	GAGTC	9 cut(s)	415, 1031, 1583, 2246, 2353, 2450, 3195, 3392, 3884
MmeI	TCCRAC	4 cut(s)	891, 1443, 2664, 2989
MroXI	GAANNNNTTC	4 cut(s)	828, 1380, 3707, 3945
MslI	CAYNNNNRTG	2 cut(s)	3582, 4197
MspA1I	CMGCKG	7 cut(s)	980, 1532, 1781, 2108, 2492, 2564, 4050
MspCI	CTTAAG	2 cut(s)	686, 1238
MspI	CCGG	3 cut(s)	521, 3342, 3999
MspR9I	CCNGG	8 cut(s)	802, 1354, 1808, 2135, 3343, 3410, 3999, 4158
MunI	CAATTG	1 cut(s)	3318
Mva1269I	GAATGC	4 cut(s)	727, 1279, 2549, 2746
MvaI	CCWGG	6 cut(s)	802, 1354, 1808, 2135, 3410, 4158
MvnI	CGCG	4 cut(s)	841, 1393, 2492, 3642
NciI	CCSGG	2 cut(s)	3343, 3999
NcoI	CCATGG	1 cut(s)	3294
NmuCI	GTSAC	1 cut(s)	2918
NsbI	TGCGCA	1 cut(s)	3393
NspI	RCATGY	2 cut(s)	432, 2392
PaeI	GCATGC	1 cut(s)	2392
PaeR7I	CTCGAG	2 cut(s)	757, 1309
PciSI	GCTCTTC	1 cut(s)	593
PcsI	WCGNNNNNNNCGW	1 cut(s)	20
PctI	GAATGC	4 cut(s)	727, 1279, 2549, 2746
PdmI	GAANNNNTTC	4 cut(s)	828, 1380, 3707, 3945
PfoI	TCCNGGA	3 cut(s)	800, 1352, 3341
PleI	GAGTC	9 cut(s)	415, 1030, 1582, 2245, 2352, 2449, 3194, 3391, 3883
PpsI	GAGTC	9 cut(s)	415, 1030, 1582, 2245, 2352, 2449, 3194, 3391, 3883
PpuMI	RGGWCCY	1 cut(s)	3116
PshBI	ATTAAT	1 cut(s)	2708
Psp124BI	GAGCTC	1 cut(s)	605
Psp5II	RGGWCCY	1 cut(s)	3116
Psp6I	CCWGG	6 cut(s)	800, 1352, 1806, 2133, 3408, 4156
PspFI	CCCAGC	2 cut(s)	2564, 3400
PspGI	CCWGG	6 cut(s)	800, 1352, 1806, 2133, 3408, 4156
PspOMI	GGGCCC	2 cut(s)	455, 3206
PspPPI	RGGWCCY	1 cut(s)	3116
PspXI	VCTCGAGB	2 cut(s)	757, 1309
PsrI	GAACNNNNNNTAC	4 cut(s)	1843, 1875, 2170, 2202
PstI	CTGCAG	2 cut(s)	1738, 2626
PstNI	CAGNNNCTG	3 cut(s)	3386, 3472, 3842
PsuI	RGATCY	4 cut(s)	880, 1432, 2803, 3277
PvuII	CAGCTG	5 cut(s)	980, 1532, 1781, 2108, 2564
RsaI	GTAC	5 cut(s)	440, 2874, 2955, 3168, 3846
RsaNI	GTAC	5 cut(s)	439, 2873, 2954, 3167, 3845
RseI	CAYNNNNRTG	2 cut(s)	3582, 4197
SacI	GAGCTC	1 cut(s)	605
SacII	CCGCGG	1 cut(s)	2493
SapI	GCTCTTC	1 cut(s)	593
SchI	GAGTC	9 cut(s)	415, 1031, 1583, 2246, 2353, 2450, 3195, 3392, 3884
ScrFI	CCNGG	8 cut(s)	802, 1354, 1808, 2135, 3343, 3410, 3999, 4158
SfcI	CTRYAG	8 cut(s)	105, 256, 1104, 1656, 1734, 1983, 2551, 2622
Sfr274I	CTCGAG	2 cut(s)	757, 1309
Sfr303I	CCGCGG	1 cut(s)	2493
SgrBI	CCGCGG	1 cut(s)	2493
SinI	GGWCC	6 cut(s)	777, 1329, 1798, 2125, 2578, 3116
SlaI	CTCGAG	2 cut(s)	757, 1309
SmiMI	CAYNNNNRTG	2 cut(s)	3582, 4197
SmlI	CTYRAG	7 cut(s)	686, 757, 844, 1238, 1309, 1396, 2383
SmoI	CTYRAG	7 cut(s)	686, 757, 844, 1238, 1309, 1396, 2383
SpeI	ACTAGT	1 cut(s)	371
SphI	GCATGC	1 cut(s)	2392
SsiI	CCGC	7 cut(s)	453, 2490, 2492, 2916, 3642, 4048, 4235
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	8 cut(s)	800, 1352, 1806, 2133, 3341, 3408, 3997, 4156
StyI	CCWWGG	5 cut(s)	2824, 3051, 3294, 3439, 4110
TaiI	ACGT	2 cut(s)	3978, 4169
TatI	WGTACW	1 cut(s)	3844
TauI	GCSGC	1 cut(s)	2492
TscAI	CASTG	7 cut(s)	706, 1258, 1771, 2098, 2560, 3891, 3970
TseFI	GTSAC	1 cut(s)	2918
Tsp45I	GTSAC	1 cut(s)	2918
TspGWI	ACGGA	3 cut(s)	853, 1405, 4007
TspRI	CASTG	7 cut(s)	706, 1258, 1771, 2098, 2560, 3891, 3970
Vha464I	CTTAAG	2 cut(s)	686, 1238
VneI	GTGCAC	1 cut(s)	516
VpaK11BI	GGWCC	6 cut(s)	777, 1329, 1798, 2125, 2578, 3116
VspI	ATTAAT	1 cut(s)	2708
XapI	RAATTY	5 cut(s)	313, 404, 947, 1499, 2513
XceI	RCATGY	2 cut(s)	432, 2392
XhoI	CTCGAG	2 cut(s)	757, 1309
XmiI	GTMKAC	2 cut(s)	677, 1229
XmnI	GAANNNNTTC	4 cut(s)	828, 1380, 3707, 3945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.