Rroxscaffold_2G00147410

N-terminal C2 in EEIG1 and EHBP1 proteins

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
85243082 .. 85247444
4363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00147410.1

Sequence Viewer

Length: 3438 bp
ATGTCAAAATTTGAAGGAGGGAGGAAGATGGGAGGGGATTCTGGTAATGCGAAATTGTTGAATGAGATTGAGACTATAAGCAAAGCCCTATACGCAGGCAAAAGGCACTCTAGGAGTAATAGTTCAATTTCTACAGGGAGTAACGCTTCGAAAACTCAGGGGAAGAACCTTTTGCCTGATCCAAAATCGAAGCCCAAGTCTGGTGGGGAGAACTCATTGCTTAAAGAGAAGAGGTCATTTTGGAATTGGAAGCCCCTGAAGGCGTTTAGCCATATCCGAAACTGTAGGTTTAACTGCTGCTTTTCTCTCGAAGTTCATTCCATTGAAGGGTTGCCGACGAATTTGAACGGCGTTAGTCTCTGTGTGCATTGGAAGAGGAGGGATGGGATTTTCGTTACTAGTCCAATGAAGGTTGTTCAAGGCGTGGCAAAATTTGAGGAGAAATTGACTCACACGTGCTCTGTGTACGGTAGTAGGAGCGGGCCCCATCATTCGGCAAAGTATGAGGCAAAGCATTTCTTGCTATATGCTTCGGTGTTTGGTGCACCGGAACTTGATTTGGGGAAGCATAGGGTTGATCTCACGAGGTTGCTTCCTCTGACATTGGAGGAATTAGAGGAGGAGAAGAGCTCAGGGAACTGGACAACGAGTTTTAAACTATCAGGAAAGGCTAAAGGTGCAACACTTAATGTTAGTTTTGGGTATACGGTGCTTAAGGATAATTCCACTGCATCAAGAAATAGCCAGAATGCTCCTGAGGGGGTGATTTCGAGGCAGAGTAGCTCGAGTTTGGCAAAAGCAGGGACCAAATATGGTCAGGTTGATGCCAGGACAACTATGCAGCGTGGTGAAAGTCTTCCTAATCAGCGCTCAAGGGCCTCATCTCGCTCCGTAGAGGACATAAAGGATCTTCACGAGGTTTTACCAATATCAAAGTCTGAACTATCCAGTTCAGTTAATGTGCTCTATCAGAAATTTGATGAAGAAGAGAAGTCGGGCACTCCAGCTGTTTACAAGCCTGAACTTGAAGTGCTCACTGAGACTGTTGAGTCCATAAAGACGACTTCCTTCCCCTCGCCTGTTTCTAGTAAAGTAACAGTAGAGAATGAGTGTGAAGAGGATGACTTTTCTGTAGTTGAGCAGGGGATAGAACTGCCATCAAAGGAAGTGATGGAACCAGAAATTATTACAGAGGCTGCTGATGCTTCTGGAGCAGAAGGTCATGTTGCTGAAATCACCACTGGACAGGTAGCAGCTGAAGAAGGAAATGAGGTCCATTCCCAGGTTGAGGGACAAGGTGGTTGTACGGATGGACTTGTGGTATGTAATTCTAGTTCCAAAGAAGATGGCTTATGCACCAAAGAATCACTTATGAAAGACCTAGATTCGGCTTTAAGTATTGTGTCAGATTTGGAGGCAGCAGGACTAGAATCTCCTGAACACCTAAAATGCTATGTAGATGATAAACTATATAAAAGAAATATGATGGGAAGTCCATGTAGCTTGGATGATGTTACAGAAAATGAGTTCTTGAGCATGCTAGGGATAGAGCAAAGTCCATCTTGCATTAGCTTTGAGAGTGAACCCGAGTCTCCAAGAGAGCGTCTGCTAAGACAGTTTGAGAAGGAGACACTCGCCGCGGGTTGTTCTTTGTTTGATGAATTTGACATAGTAACCGATGACCAAGCAGAATGCAGCTACAGTGATGCAGCTGGGTCTGATTGGGGCCACCTATCTGAGAGTTTTGATCTTTCTGCCATGATTCAAGCTGCAGAGGAGGAGCATCAGATGGCAGCTCAACCAGCAAGGAGTAAAGCAAAGGCCAAAATGTTGGAAGACTTGGAGACAGAAGCATTAATGCGTGAGTGGGGTTTGAATGAGATGGCGTTTCAGCATTCTCCCCCAAAAAGCTCTCATGGTTTTGGAAGTCCATTAGATTTGCCTCATGAAGATCCACTTGAACTTCCTCCCCTTGGAGAAGGCATAGGCCCTTTTCTTCAGACAAAGAATGGAGGATTTGTACGGTCAATGAACCCCACACTTTTCAAAAATGCTAAAAGTGGCGGTGACTTGATCATGCAGGTTTCTAGCCCCGTTGTGGTACCAGCAGAAATGGGCTCTGGGGTAATGGATATATTGCAGCATTTGGCATCAGTAGGAATCGAAAAGCTTTCTATGCAGGCAAATAAGTTAATGCCCCTGGAAGATATTACTGGAAAGACGATGGAGCAAGTAGCATGGGAAGCTGTGCCTGCTTTGGAGGGACCTCAGAGGGATTGTATCTCGCAGCATGAATCAGTTGTTGGGCAAGATGTACCAGATGGGCGAACAAGAGTCGAAGGAAGTTCATATGGGCCCAAGTCTAGGAAGTCCAAGAAAAACACAGTTGGCGATGAGATGGCCTCAGAATATGTTTCTTTAGAAGATCTTGCACCTTTAGCCATGGATAAAATTGAAGCACTTTCAATTGAGGGGTTGAGAATACAATCCGGGATGTCAGATGTGGATGAACCTTCAAGCATTAGCACAGAGTCTGTTGCGCAAAACCCAGCTCTCCAGGGCAAGGGTGTTAATGTTGGTGAACTCCTTGGTTTGGAGGGAGCTGCTGGATTGCAGTTGCTGGACATAAAAGATGGTGGCAATGATGTTGATGGATTAATGGGCCTTTCATTAACTCTTGATGAATGGATGAAACTTGATTCTGGTGAAATTGATGATGAAGATCATATTAGTGAGAGAACTACCCAAATCCTTGCTGCTCATCATGCAAACTCTTTGGACATGATTCGCGGAGGGTCGAAGGGAGAGAGAAGGCGTGGTAAAGGAGCAAGAAAGTGTGGTTTATTGGGGAATAATTTCACAGTAGCATTAATGGTGCAACTTCGTGATCCACTAAGAAACTATGAGCCTGTTGGGGCTCCAATGCTTGCTCTTATTCAAGTTGAGAGAGTGTTTCTCCCACCAAAGCCCAAGATTTACAGCACAGTTTCTGAACTAAGGAAAAGTAATGAAGAGGATGATGAGTCTGGGTCAGTGGTGAAAGAGGACATCAAGGAGGAGAAAAAAGATGAGAAACTTCCTGAAGAGGAAGCTATTCCTCAGTTTAAAATCACTGAAGTCCACGTTGCTGGTCTGAAAACGGAGCCCGGAAAAAAGAAGCTATGGGGTAATACAAACCAGCAACAATCAGGTTCCCGCTGGTTGCTTGCTAATGGAATGGGGAAAAACAATAAGCATCCATTTTTGAAGTCAAAGGCCAAGGCTGCTCCGAAATCTTCTACTTCAGCAACAACAAAGGTGCAGCCTGGTGATACGTTGTGGAGCATCTCTGCTCGTGTTCATGGTGATGGATCAAAATGGAAGGAATTGGCAGCTCTAAATCCGCATATAAGGAACCCCAATGTTATCTTACCAAATGAAACTATCAGATTGTGCTGA

Protein Analysis

1145

Amino Acids

124.62

Weight (kDa)

5.26

Isoelectric Point (pI)

47.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 96 - 241 6.6e-19 N-terminal C2 in EEIG1 and EHBP1 proteins
PMI1_PMIR1-2_C PF21745 691 - 842 4.2e-59 PMI1/PMIR1-2, C-terminal domain
LysM PF01476 1099 - 1143 4.2e-09 LysM domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1048
Acc16I TGCGCA 1 cut(s) 2541
Acc36I ACCTGC 1 cut(s) 2071
Acc65I GGTACC 1 cut(s) 2101
AccB1I GGYRCC 1 cut(s) 2101
AccBSI CCGCTC 1 cut(s) 480
AccI GTMKAC 1 cut(s) 704
AccII CGCG 2 cut(s) 1640, 2790
AciI CCGC 7 cut(s) 480, 1638, 1640, 2064, 2790, 3196, 3383
AclWI GGATC 5 cut(s) 173, 915, 1946, 2882, 3358
AcsI RAATTY 5 cut(s) 8, 340, 431, 974, 1661
AcuI CTGAAG 6 cut(s) 278, 1278, 1982, 3102, 3135, 3267
AcvI CACGTG 1 cut(s) 456
AfaI GTAC 5 cut(s) 467, 1306, 2022, 2103, 2316
AfeI AGCGCT 1 cut(s) 869
AflII CTTAAG 1 cut(s) 713
AflIII ACRYGT 1 cut(s) 453
AhlI ACTAGT 1 cut(s) 398
AjnI CCWGG 5 cut(s) 827, 1281, 2199, 2556, 3304
AjuI GAANNNNNNNTTGG 2 cut(s) 2286, 2318
AloI GAACNNNNNNTCC 2 cut(s) 106, 138
Alw21I GWGCWC 5 cut(s) 461, 547, 632, 966, 1035
Alw26I GTCTC 6 cut(s) 65, 362, 1034, 1596, 1622, 1838
Alw44I GTGCAC 1 cut(s) 543
AlwI GGATC 5 cut(s) 173, 915, 1946, 2882, 3358
AlwNI CAGNNNCTG 4 cut(s) 1196, 2534, 2620, 2990
Ama87I CYCGRG 2 cut(s) 784, 1586
Aor51HI AGCGCT 1 cut(s) 869
AoxI GGCC 9 cut(s) 482, 876, 1726, 1821, 1987, 2354, 2400, 2662, 3255
ApaI GGGCCC 2 cut(s) 486, 2358
ApaLI GTGCAC 1 cut(s) 543
ApoI RAATTY 5 cut(s) 8, 340, 431, 974, 1661
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
AseI ATTAAT 3 cut(s) 1856, 2657, 2870
Asp700I GAANNNNTTC 3 cut(s) 855, 2855, 3093
Asp718I GGTACC 1 cut(s) 2101
AspLEI GCGC 2 cut(s) 870, 2542
AsuC2I CCSGG 2 cut(s) 2491, 3147
AsuHPI GGTGA 9 cut(s) 775, 860, 1228, 2078, 2591, 2717, 3049, 3320, 3356
AsuII TTCGAA 1 cut(s) 149
AvaI CYCGRG 2 cut(s) 784, 1586
AvaII GGWCC 3 cut(s) 804, 1273, 2264
AxyI CCTNAGG 1 cut(s) 756
BaeGI GKGCMC 4 cut(s) 486, 547, 1001, 2358
BanI GGYRCC 1 cut(s) 2101
BanII GRGCYC 6 cut(s) 486, 632, 2120, 2358, 2920, 3147
BauI CACGAG 3 cut(s) 583, 914, 3333
BbrPI CACGTG 1 cut(s) 456
BbsI GAAGAC 2 cut(s) 848, 1842
Bbv12I GWGCWC 5 cut(s) 461, 547, 632, 966, 1035
BceAI ACGGC 1 cut(s) 364
BciT130I CCWGG 5 cut(s) 829, 1283, 2201, 2558, 3306
BclI TGATCA 1 cut(s) 2073
BcnI CCSGG 2 cut(s) 2491, 3147
BcoDI GTCTC 6 cut(s) 65, 362, 1034, 1596, 1622, 1838
BcuI ACTAGT 1 cut(s) 398
BfaI CTAG 9 cut(s) 111, 399, 1086, 1332, 1382, 1427, 1541, 2088, 2364
BfmI CTRYAG 5 cut(s) 132, 283, 1131, 1699, 1770
BfoI RGCGCY 1 cut(s) 871
BfrI CTTAAG 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 2071
BglII AGATCT 1 cut(s) 2425
Bme1390I CCNGG 7 cut(s) 829, 1283, 2201, 2491, 2558, 3147, 3306
Bme18I GGWCC 3 cut(s) 804, 1273, 2264
BmeT110I CYCGRG 2 cut(s) 784, 1586
BmrFI CCNGG 7 cut(s) 829, 1283, 2201, 2491, 2558, 3147, 3306
BmsI GCATC 8 cut(s) 740, 814, 1192, 1696, 1792, 2159, 3244, 3333
BpiI GAAGAC 2 cut(s) 848, 1842
BplI GAGNNNNNCTC 6 cut(s) 614, 646, 2387, 2419, 2940, 2972
BpmI CTGGAG 3 cut(s) 987, 1230, 2540
Bpu10I CCTNAGC 1 cut(s) 631
Bpu14I TTCGAA 1 cut(s) 149
BpuEI CTTGAG 2 cut(s) 856, 1552
BpuMI CCSGG 2 cut(s) 2491, 3147
BsaAI YACGTR 1 cut(s) 456
BsaBI GATNNNNATC 1 cut(s) 2721
BsaJI CCNNGG 8 cut(s) 1281, 1638, 1972, 2199, 2442, 2557, 2587, 3258
BsaWI WCCGGW 1 cut(s) 547
BsaXI ACNNNNNCTCC 4 cut(s) 106, 136, 2004, 2034
Bse1I ACTGG 4 cut(s) 644, 948, 1246, 2218
Bse21I CCTNAGG 1 cut(s) 756
Bse3DI GCAATG 2 cut(s) 215, 2647
Bse8I GATNNNNATC 1 cut(s) 2721
BseBI CCWGG 5 cut(s) 829, 1283, 2201, 2558, 3306
BseDI CCNNGG 8 cut(s) 1281, 1638, 1972, 2199, 2442, 2557, 2587, 3258
BseGI GGATG 9 cut(s) 388, 1126, 1315, 1513, 2499, 2512, 2694, 3022, 3235
BseJI GATNNNNATC 1 cut(s) 2721
BseMI GCAATG 2 cut(s) 215, 2647
BseMII CTCAG 8 cut(s) 170, 645, 747, 1029, 1728, 2282, 2418, 3113
BseNI ACTGG 4 cut(s) 644, 948, 1246, 2218
BseRI GAGGAG 7 cut(s) 391, 452, 632, 635, 1790, 1793, 3071
BseSI GKGCMC 4 cut(s) 486, 547, 1001, 2358
BseYI CCCAGC 2 cut(s) 1712, 2548
BsgI GTGCAG 1 cut(s) 3320
Bsh1236I CGCG 2 cut(s) 1640, 2790
BshFI GGCC 9 cut(s) 484, 878, 1728, 1823, 1989, 2356, 2402, 2664, 3257
BshNI GGYRCC 1 cut(s) 2101
BsiHKAI GWGCWC 5 cut(s) 461, 547, 632, 966, 1035
BsiHKCI CYCGRG 2 cut(s) 784, 1586
BsiSI CCGG 3 cut(s) 548, 2490, 3147
BslFI GGGAC 3 cut(s) 817, 1305, 2277
BsmAI GTCTC 6 cut(s) 65, 362, 1034, 1596, 1622, 1838
BsmFI GGGAC 3 cut(s) 817, 1305, 2277
BsmI GAATGC 3 cut(s) 754, 1697, 1894
BsnI GGCC 9 cut(s) 484, 878, 1728, 1823, 1989, 2356, 2402, 2664, 3257
BsoBI CYCGRG 2 cut(s) 784, 1586
Bsp119I TTCGAA 1 cut(s) 149
Bsp120I GGGCCC 2 cut(s) 482, 2354
Bsp19I CCATGG 1 cut(s) 2442
BspACI CCGC 7 cut(s) 480, 1638, 1640, 2064, 2790, 3196, 3383
BspANI GGCC 9 cut(s) 484, 878, 1728, 1823, 1989, 2356, 2402, 2664, 3257
BspCNI CTCAG 8 cut(s) 169, 644, 748, 1030, 1729, 2281, 2417, 3112
BspFNI CGCG 2 cut(s) 1640, 2790
BspHI TCATGA 1 cut(s) 1945
BspMAI CTGCAG 1 cut(s) 1774
BspMI ACCTGC 1 cut(s) 2071
BspPI GGATC 5 cut(s) 173, 915, 1946, 2882, 3358
BspQI GCTCTTC 1 cut(s) 620
BspT104I TTCGAA 1 cut(s) 149
BspT107I GGYRCC 1 cut(s) 2101
BspTI CTTAAG 1 cut(s) 713
BsrBI CCGCTC 1 cut(s) 480
BsrDI GCAATG 2 cut(s) 215, 2647
BsrI ACTGG 4 cut(s) 644, 948, 1246, 2218
BssECI CCNNGG 8 cut(s) 1281, 1638, 1972, 2199, 2442, 2557, 2587, 3258
BssNAI GTATAC 1 cut(s) 705
BssSI CACGAG 3 cut(s) 583, 914, 3333
BssT1I CCWWGG 4 cut(s) 1972, 2442, 2587, 3258
Bst1107I GTATAC 1 cut(s) 705
Bst2BI CACGAG 3 cut(s) 583, 914, 3333
Bst2UI CCWGG 5 cut(s) 829, 1283, 2201, 2558, 3306
Bst6I CTCTTC 7 cut(s) 224, 368, 620, 981, 1110, 3006, 3078
BstAFI CTTAAG 1 cut(s) 713
BstAPI GCANNNNNTGC 1 cut(s) 520
BstBAI YACGTR 1 cut(s) 456
BstBI TTCGAA 1 cut(s) 149
BstC8I GCNNGC 7 cut(s) 97, 482, 1538, 2181, 2253, 2928, 3207
BstDSI CCRYGG 2 cut(s) 1638, 2442
BstF5I GGATG 9 cut(s) 388, 1126, 1315, 1513, 2499, 2512, 2694, 3022, 3235
BstFNI CGCG 2 cut(s) 1640, 2790
BstH2I RGCGCY 1 cut(s) 871
BstHHI GCGC 2 cut(s) 870, 2542
BstMAI GTCTC 6 cut(s) 65, 362, 1034, 1596, 1622, 1838
BstNI CCWGG 5 cut(s) 829, 1283, 2201, 2558, 3306
BstNSI RCATGY 1 cut(s) 1540
BstSCI CCNGG 7 cut(s) 827, 1281, 2199, 2489, 2556, 3145, 3304
BstSFI CTRYAG 5 cut(s) 132, 283, 1131, 1699, 1770
BstSLI GKGCMC 4 cut(s) 486, 547, 1001, 2358
BstUI CGCG 2 cut(s) 1640, 2790
BstV2I GAAGAC 2 cut(s) 848, 1842
BstX2I RGATCY 3 cut(s) 907, 1951, 2425
BstXI CCANNNNNNTGG 2 cut(s) 1831, 3128
BstYI RGATCY 3 cut(s) 907, 1951, 2425
BstZ17I GTATAC 1 cut(s) 705
Bsu36I CCTNAGG 1 cut(s) 756
BsuRI GGCC 9 cut(s) 484, 878, 1728, 1823, 1989, 2356, 2402, 2664, 3257
BtgI CCRYGG 2 cut(s) 1638, 2442
BtgZI GCGATG 1 cut(s) 2406
BtsCI GGATG 9 cut(s) 388, 1126, 1315, 1513, 2499, 2512, 2694, 3022, 3235
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 6 cut(s) 726, 1035, 1239, 1708, 3039, 3111
BveI ACCTGC 1 cut(s) 2071
Cac8I GCNNGC 7 cut(s) 97, 482, 1538, 2181, 2253, 2928, 3207
CaiI CAGNNNCTG 4 cut(s) 1196, 2534, 2620, 2990
CciI TCATGA 1 cut(s) 1945
CfoI GCGC 2 cut(s) 870, 2542
Cfr42I CCGCGG 1 cut(s) 1641
CseI GACGC 1 cut(s) 1592
Csp6I GTAC 5 cut(s) 466, 1305, 2021, 2102, 2315
CspCI CAANNNNNGTGG 2 cut(s) 184, 219
CviQI GTAC 5 cut(s) 466, 1305, 2021, 2102, 2315
DraI TTTAAA 2 cut(s) 655, 3106
DrdI GACNNNNNNGTC 1 cut(s) 1048
DseDI GACNNNNNNGTC 1 cut(s) 1048
Eam1104I CTCTTC 7 cut(s) 224, 368, 620, 981, 1110, 3006, 3078
EarI CTCTTC 7 cut(s) 224, 368, 620, 981, 1110, 3006, 3078
Ecl136II GAGCTC 1 cut(s) 630
Eco130I CCWWGG 4 cut(s) 1972, 2442, 2587, 3258
Eco24I GRGCYC 6 cut(s) 486, 632, 2120, 2358, 2920, 3147
Eco47I GGWCC 3 cut(s) 804, 1273, 2264
Eco47III AGCGCT 1 cut(s) 869
Eco53kI GAGCTC 1 cut(s) 630
Eco57I CTGAAG 6 cut(s) 278, 1278, 1982, 3102, 3135, 3267
Eco72I CACGTG 1 cut(s) 456
Eco81I CCTNAGG 1 cut(s) 756
Eco88I CYCGRG 2 cut(s) 784, 1586
EcoICRI GAGCTC 1 cut(s) 630
EcoO109I RGGNCCY 4 cut(s) 483, 876, 1988, 2264
EcoRII CCWGG 5 cut(s) 827, 1281, 2199, 2556, 3304
EcoT14I CCWWGG 4 cut(s) 1972, 2442, 2587, 3258
EcoT38I GRGCYC 6 cut(s) 486, 632, 2120, 2358, 2920, 3147
ErhI CCWWGG 4 cut(s) 1972, 2442, 2587, 3258
FalI AAGNNNNNCTT 8 cut(s) 503, 535, 1353, 1385, 1546, 1578, 1941, 1973
FaqI GGGAC 3 cut(s) 817, 1305, 2277
FauI CCCGC 3 cut(s) 473, 1633, 3203
FauNDI CATATG 1 cut(s) 2350
FbaI TGATCA 1 cut(s) 2073
FblI GTMKAC 1 cut(s) 704
FokI GGATG 9 cut(s) 395, 1133, 1322, 1520, 2506, 2519, 2701, 3029, 3222
FriOI GRGCYC 6 cut(s) 486, 632, 2120, 2358, 2920, 3147
FspBI CTAG 9 cut(s) 111, 399, 1086, 1332, 1382, 1427, 1541, 2088, 2364
FspI TGCGCA 1 cut(s) 2541
GlaI GCGC 2 cut(s) 869, 2541
GsaI CCCAGC 2 cut(s) 1716, 2552
GsuI CTGGAG 3 cut(s) 987, 1230, 2540
HaeII RGCGCY 1 cut(s) 871
HaeIII GGCC 9 cut(s) 484, 878, 1728, 1823, 1989, 2356, 2402, 2664, 3257
HapII CCGG 3 cut(s) 548, 2490, 3147
HgaI GACGC 1 cut(s) 1592
HhaI GCGC 2 cut(s) 870, 2542
Hin6I GCGC 2 cut(s) 868, 2540
HinP1I GCGC 2 cut(s) 868, 2540
HindIII AAGCTT 1 cut(s) 2168
HpaII CCGG 3 cut(s) 548, 2490, 3147
HphI GGTGA 9 cut(s) 775, 860, 1228, 2078, 2591, 2717, 3049, 3320, 3356
Hpy166II GTNNAC 7 cut(s) 466, 545, 705, 1012, 1583, 2582, 3121
Hpy8I GTNNAC 7 cut(s) 466, 545, 705, 1012, 1583, 2582, 3121
Hpy99I CGWCG 1 cut(s) 340
HpyCH4IV ACGT 3 cut(s) 455, 3123, 3314
HpySE526I ACGT 3 cut(s) 455, 3123, 3314
HspAI GCGC 2 cut(s) 868, 2540
KpnI GGTACC 1 cut(s) 2105
Ksp22I TGATCA 1 cut(s) 2073
KspI CCGCGG 1 cut(s) 1641
LguI GCTCTTC 1 cut(s) 620
LweI GCATC 8 cut(s) 740, 814, 1192, 1696, 1792, 2159, 3244, 3333
MaeI CTAG 9 cut(s) 111, 399, 1086, 1332, 1382, 1427, 1541, 2088, 2364
MaeII ACGT 3 cut(s) 455, 3123, 3314
MaeIII GTNAC 6 cut(s) 140, 394, 1093, 1513, 1672, 2066
MbiI CCGCTC 1 cut(s) 480
MfeI CAATTG 1 cut(s) 2466
MflI RGATCY 3 cut(s) 907, 1951, 2425
MlyI GAGTC 6 cut(s) 442, 1058, 1598, 2343, 2540, 3032
MmeI TCCRAC 1 cut(s) 1812
MroXI GAANNNNTTC 3 cut(s) 855, 2855, 3093
MslI CAYNNNNRTG 2 cut(s) 2730, 3345
MspA1I CMGCKG 5 cut(s) 1007, 1256, 1640, 1712, 3198
MspCI CTTAAG 1 cut(s) 713
MspI CCGG 3 cut(s) 548, 2490, 3147
MspR9I CCNGG 7 cut(s) 829, 1283, 2201, 2491, 2558, 3147, 3306
MunI CAATTG 1 cut(s) 2466
Mva1269I GAATGC 3 cut(s) 754, 1697, 1894
MvaI CCWGG 5 cut(s) 829, 1283, 2201, 2558, 3306
MvnI CGCG 2 cut(s) 1640, 2790
NciI CCSGG 2 cut(s) 2491, 3147
NcoI CCATGG 1 cut(s) 2442
NdeI CATATG 1 cut(s) 2350
NmuCI GTSAC 1 cut(s) 2066
NsbI TGCGCA 1 cut(s) 2541
NspI RCATGY 1 cut(s) 1540
NspV TTCGAA 1 cut(s) 149
PaeI GCATGC 1 cut(s) 1540
PaeR7I CTCGAG 1 cut(s) 784
PagI TCATGA 1 cut(s) 1945
PciSI GCTCTTC 1 cut(s) 620
PctI GAATGC 3 cut(s) 754, 1697, 1894
PdmI GAANNNNTTC 3 cut(s) 855, 2855, 3093
PfeI GAWTC 9 cut(s) 38, 1364, 1385, 1430, 1762, 2160, 2294, 2699, 2785
PfoI TCCNGGA 1 cut(s) 2489
PleI GAGTC 6 cut(s) 442, 1057, 1597, 2342, 2539, 3031
PmaCI CACGTG 1 cut(s) 456
PmlI CACGTG 1 cut(s) 456
PpsI GAGTC 6 cut(s) 442, 1057, 1597, 2342, 2539, 3031
Ppu21I YACGTR 1 cut(s) 456
PpuMI RGGWCCY 1 cut(s) 2264
PshBI ATTAAT 3 cut(s) 1856, 2657, 2870
Psp124BI GAGCTC 1 cut(s) 632
Psp5II RGGWCCY 1 cut(s) 2264
Psp6I CCWGG 5 cut(s) 827, 1281, 2199, 2556, 3304
PspCI CACGTG 1 cut(s) 456
PspFI CCCAGC 2 cut(s) 1712, 2548
PspGI CCWGG 5 cut(s) 827, 1281, 2199, 2556, 3304
PspOMI GGGCCC 2 cut(s) 482, 2354
PspPPI RGGWCCY 1 cut(s) 2264
PspXI VCTCGAGB 1 cut(s) 784
PsrI GAACNNNNNNTAC 2 cut(s) 1318, 1350
PstI CTGCAG 1 cut(s) 1774
PstNI CAGNNNCTG 4 cut(s) 1196, 2534, 2620, 2990
PsuI RGATCY 3 cut(s) 907, 1951, 2425
PvuII CAGCTG 3 cut(s) 1007, 1256, 1712
RsaI GTAC 5 cut(s) 467, 1306, 2022, 2103, 2316
RsaNI GTAC 5 cut(s) 466, 1305, 2021, 2102, 2315
RseI CAYNNNNRTG 2 cut(s) 2730, 3345
SacI GAGCTC 1 cut(s) 632
SacII CCGCGG 1 cut(s) 1641
SapI GCTCTTC 1 cut(s) 620
SchI GAGTC 6 cut(s) 442, 1058, 1598, 2343, 2540, 3032
ScrFI CCNGG 7 cut(s) 829, 1283, 2201, 2491, 2558, 3147, 3306
SfaNI GCATC 8 cut(s) 740, 814, 1192, 1696, 1792, 2159, 3244, 3333
SfcI CTRYAG 5 cut(s) 132, 283, 1131, 1699, 1770
Sfr274I CTCGAG 1 cut(s) 784
Sfr303I CCGCGG 1 cut(s) 1641
SfuI TTCGAA 1 cut(s) 149
SgrBI CCGCGG 1 cut(s) 1641
SinI GGWCC 3 cut(s) 804, 1273, 2264
SlaI CTCGAG 1 cut(s) 784
SmiMI CAYNNNNRTG 2 cut(s) 2730, 3345
SmlI CTYRAG 4 cut(s) 713, 784, 871, 1531
SmoI CTYRAG 4 cut(s) 713, 784, 871, 1531
SpeI ACTAGT 1 cut(s) 398
SphI GCATGC 1 cut(s) 1540
SsiI CCGC 7 cut(s) 480, 1638, 1640, 2064, 2790, 3196, 3383
SspMI CTAG 9 cut(s) 111, 399, 1086, 1332, 1382, 1427, 1541, 2088, 2364
SstI GAGCTC 1 cut(s) 632
StyD4I CCNGG 7 cut(s) 827, 1281, 2199, 2489, 2556, 3145, 3304
StyI CCWWGG 4 cut(s) 1972, 2442, 2587, 3258
TaiI ACGT 3 cut(s) 458, 3126, 3317
TaqI TCGA 8 cut(s) 149, 188, 309, 770, 785, 2163, 2337, 2798
TauI GCSGC 1 cut(s) 1640
TfiI GAWTC 9 cut(s) 38, 1364, 1385, 1430, 1762, 2160, 2294, 2699, 2785
TscAI CASTG 6 cut(s) 733, 1042, 1246, 1708, 3039, 3118
TseFI GTSAC 1 cut(s) 2066
Tsp45I GTSAC 1 cut(s) 2066
TspGWI ACGGA 3 cut(s) 880, 1322, 3155
TspRI CASTG 6 cut(s) 733, 1042, 1246, 1708, 3039, 3118
Vha464I CTTAAG 1 cut(s) 713
VneI GTGCAC 1 cut(s) 543
VpaK11BI GGWCC 3 cut(s) 804, 1273, 2264
VspI ATTAAT 3 cut(s) 1856, 2657, 2870
XapI RAATTY 5 cut(s) 8, 340, 431, 974, 1661
XceI RCATGY 1 cut(s) 1540
XhoI CTCGAG 1 cut(s) 784
XmiI GTMKAC 1 cut(s) 704
XmnI GAANNNNTTC 3 cut(s) 855, 2855, 3093
XspI CTAG 9 cut(s) 111, 399, 1086, 1332, 1382, 1427, 1541, 2088, 2364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.