Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002462.1

Orthogroup ID

OG0009549

Physical Location & Seq

Genomic Coordinates Reverse (-)

5617 .. 10897

Gene Structure 5281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002462.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

atggcatacactcccacgatgagctccaccaaatcccgccgtaaagtggctccggcggccgccgataatggcgactctggcgagaaactcgaccaactcctcctctcctccgccatctccaacggcgaggacgtcggccccttcgtccgcaaagccttcgcctccgggaaacccgagaccctcctcctccacctccgccacttctcgcgctccaaagagtccgaaatcgaagaggtctgccgggcccactaccaagacttcatccaagccgtcgacgacctccgatctctcctctccgacgtggactccctcaagtcttctctctccgaatccaacgccaagctccaggccgtcggattgccgctgctgacgtcgctggacgccttcgtcgaagctcgaaacgtctgccgaaacgtcaacctggcgctccaatcggtccgaaactgtattcggctcatggagctctgctcccgatccaactaccacctctcccgaggcaacttctacatggcgctcaagtgtgtggacacaatcgagtgcgtgttcctggacaaaacgccgtcgtctacgattaagcggatgctggagaagaagattccggagattcggtggcaaatcgagcgcaaggtgatgaaggacttcaacgattggctggtggagatccgagtggtgtgccggaatttaggtcaattggcgatcggtcaagcttcgtcggccaggcaaagagaggaggatctgagaatcaagcagcgccaagctgaggagcagagcaggctcagcctcagagattgtgtctacgctttggaggaggaggacgaagatccggttggagatgatagtagcaatggcgaaggggttgacttgactccattgtacagagcctatcatatacaccagactctgggagttgaggaccggtttaagcagtattacttcgaaaatcgcaagcttcagctcacttcggattttcaggtatcttccatgactccgtttcttgagtctcatcagactttctttgcgcaaatcgccgggttttttattgtggaggatagagttgtgaggaccggaggtggattgatatcgaaattggaggttgagaatctgtgggagactgctgtgagtaaaatgtgttcagttttagaggatcaattttctaggatgcagactgccaaccatttgttgctgatcaaggactatgtgagcttgttaggtgtgactttgcggaggtatggatatttggttgatcctttgcttgatgtgttgagcaagcacagggataagtaccatgagttgctattatcggattgtagaaagcagattacggaagcgctttctgcggataagtttgatcagatgttgatgaagaaagagtatgagtattccatgaatgtgctttcgtttcagttacagacttctgatatcacaccagcttttccttatgttgcaccctttagctctacggtgcctgattgttgccgcattgtgcggtcttttattgaggattctgtgagtttcatgtcctatggtgggcagcttgatttctttgaggttgtgaagaagtatttggatcggctattaagtgaggatttagatggcgctcttgtgaagcttatcaatacatctgtcagtgccgtctccccggcaatgcaggtggctgctaatatggctgtcatggagagagcttgtgatttcttcttccgacatgctgctcagctttctggcattcctttgagaatggtggagaggggcaggaggcagtttccgctatgtaaagcccgcgatgctgcagaagacatactctcagggttgcttaaacaaaaagttgatgggttcatgacactgatggagagtgtgaactggatggctgatgagactctgcagaatgggaatgagtatgtgaatgagctgatcatatatttggaaactctggtttccgctgcacagcagatattgccaccaaatgttcttaaacgagttatacaagatgttctttctcatatatcggagaagatagttggggctttacttggggactcagttaagaggtttactgtaaatgcaattatgagcatcgatgtggacattcgggtattcgaatcttttgcagataatcaagcacctttactgtcagaggaggatgcaaatcagttgaaatcggcacttgctgaatcaaggcagttggttaatttactcttaagcaacaatccagagacttttcttaatcctgggaagcaggcagaacccaaagaagaaatctctagatttgttgataaaaagactcaaggatatggcataaaacctatggacgtgtgttttgaccatttagaagatcctgcaaagggctacgagttgaacacagaaaccggccagttctcggcctatttgaacggaacttgcagcttctctgttgaagattcatatcagctcgagtacaagtccaccataactggtgttttgtccaaagacaggctcaaagatttgaagggcgtccgtgtcaaggtgctcttcttctggcttagcattgtcgaagtggttcatgacggcgacgagctgcagttctctgtggggattgcttcggcaaattttccagtcaacaacttggacgagcgtcctcagtgtgggtgtggattggattgtaaccagttgagcactgtcctgccttcatatccagacagaacatactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009875 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0030054 GO:0030154 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0048468 GO:0048544 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060321 GO:0060560 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec15

Protein Analysis

894

Amino Acids

100.98

Weight (kDa)

5.22

Isoelectric Point (pI)

42.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009549)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02350 AT4G02350
fragaria_vesca	FvH4_2g25910 FvH4_2g25910 FvH4_2g25910 FvH4_2g25910
malus_domestica	MD03G1290500.v1.1 MD11G1308000.v1.1
prunus_persica	Prupe.8G263500_v2.0.a1
pyrus_communis	pycom03g22980 pycom11g26930
rosa_chinensis	RchiOBHm_Chr6g0294231
rosa_laevigata	RLG00000011888
rosa_multiflora	Rmu_co8430431.1_g000001 Rmu_sc0002462.1_g000003
rosa_roxburghii	Rroxscaffold_7G00173530
rosa_rugosa	Rorug06G0242700
rosa_samantha	Rh6AG354900 Rh6BG361800 Rh6CG369100 Rh6DG355900
rosa_wichuraiana	Rw6G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1639
AasI	GACNNNNNNGTC	1 cut(s)	386
AatII	GACGTC	2 cut(s)	135, 374
Acc16I	TGCGCA	1 cut(s)	1020
Acc36I	ACCTGC	1 cut(s)	1639
AccB1I	GGYRCC	1 cut(s)	1462
AccB7I	CCANNNNNTGG	1 cut(s)	901
AccI	GTMKAC	3 cut(s)	273, 566, 795
AccII	CGCG	2 cut(s)	208, 1779
AccIII	TCCGGA	1 cut(s)	598
AclWI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2324
AcoI	YGGCCR	3 cut(s)	57, 714, 2365
AcsI	RAATTY	2 cut(s)	679, 2581
AcuI	CTGAAG	1 cut(s)	935
AcyI	GRCGYC	4 cut(s)	132, 371, 381, 2487
AfaI	GTAC	3 cut(s)	875, 1283, 2432
AfeI	AGCGCT	1 cut(s)	1329
AfiI	CCNNNNNNNGG	9 cut(s)	46, 760, 901, 1527, 2339, 2374, 2466, 2497, 2618
AflII	CTTAAG	1 cut(s)	2194
AflIII	ACRYGT	1 cut(s)	2307
AgeI	ACCGGT	1 cut(s)	915
AgsI	TTSAA	6 cut(s)	643, 2152, 2353, 2386, 2411, 2482
AjiI	CACGTC	2 cut(s)	301, 2308
AjnI	CCWGG	5 cut(s)	345, 420, 546, 716, 2224
AjuI	GAANNNNNNNTTGG	4 cut(s)	810, 842, 1547, 1579
Alw21I	GWGCWC	4 cut(s)	26, 465, 2505, 2651
Alw26I	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
AlwI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2324
AlwNI	CAGNNNCTG	1 cut(s)	901
Ama87I	CYCGRG	3 cut(s)	173, 492, 2426
Aor13HI	TCCGGA	1 cut(s)	598
Aor51HI	AGCGCT	1 cut(s)	1329
AoxI	GGCC	7 cut(s)	57, 136, 243, 348, 714, 2365, 2376
ApaI	GGGCCC	1 cut(s)	247
ApeKI	GCWGC	9 cut(s)	364, 748, 1531, 1655, 1706, 1784, 1937, 2397, 2551
ApoI	RAATTY	2 cut(s)	679, 2581
ArsI	GACNNNNNNTTYG	2 cut(s)	2297, 2329
AsiGI	ACCGGT	1 cut(s)	915
Asp700I	GAANNNNTTC	2 cut(s)	638, 2532
AspLEI	GCGC	8 cut(s)	210, 427, 514, 624, 753, 1021, 1330, 1598
AspS9I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
AsuC2I	CCSGG	4 cut(s)	166, 242, 1030, 1640
AsuHPI	GGTGA	1 cut(s)	640
AsuII	TTCGAA	2 cut(s)	936, 2094
AvaI	CYCGRG	3 cut(s)	173, 492, 2426
AvaII	GGWCC	3 cut(s)	436, 913, 1062
BaeGI	GKGCMC	1 cut(s)	247
BanI	GGYRCC	1 cut(s)	1462
BanII	GRGCYC	3 cut(s)	26, 247, 465
BbsI	GAAGAC	2 cut(s)	309, 1797
Bbv12I	GWGCWC	4 cut(s)	26, 465, 2505, 2651
BbvCI	CCTCAGC	1 cut(s)	759
BbvI	GCAGC	9 cut(s)	351, 760, 1543, 1642, 1693, 1771, 1924, 2409, 2538
BccI	CCATC	5 cut(s)	122, 1586, 1820, 1837, 1855
BceAI	ACGGC	7 cut(s)	24, 139, 254, 335, 544, 1616, 2557
BcgI	CGANNNNNNTGC	8 cut(s)	139, 173, 387, 421, 654, 688, 2084, 2118
BciT130I	CCWGG	5 cut(s)	347, 422, 548, 718, 2226
BclI	TGATCA	3 cut(s)	1185, 1348, 1908
BcnI	CCSGG	4 cut(s)	166, 242, 1030, 1640
BcoDI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BfaI	CTAG	2 cut(s)	1155, 2259
BfmI	CTRYAG	3 cut(s)	1785, 1877, 2552
BfoI	RGCGCY	5 cut(s)	428, 515, 754, 1331, 1599
BfrI	CTTAAG	1 cut(s)	2194
BfuAI	ACCTGC	1 cut(s)	1639
BlpI	GCTNAGC	3 cut(s)	776, 1710, 2516
Bme1390I	CCNGG	9 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640, 2226
Bme18I	GGWCC	3 cut(s)	436, 913, 1062
BmeT110I	CYCGRG	3 cut(s)	173, 492, 2426
BmgBI	CACGTC	2 cut(s)	301, 2308
BmgT120I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
BmiI	GGNNCC	4 cut(s)	51, 139, 245, 1464
BmrFI	CCNGG	9 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640, 2226
BmsI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
BoxI	GACNNNNGTC	1 cut(s)	2607
BpiI	GAAGAC	2 cut(s)	309, 1797
BplI	GAGNNNNNCTC	2 cut(s)	452, 484
BpmI	CTGGAG	2 cut(s)	329, 605
Bpu10I	CCTNAGC	1 cut(s)	759
Bpu1102I	GCTNAGC	3 cut(s)	776, 1710, 2516
Bpu14I	TTCGAA	2 cut(s)	936, 2094
BpuEI	CTTGAG	4 cut(s)	296, 500, 1016, 2265
BpuMI	CCSGG	4 cut(s)	166, 242, 1030, 1640
Bsa29I	ATCGAT	1 cut(s)	2073
BsaBI	GATNNNNATC	3 cut(s)	1078, 2142, 2418
BsaHI	GRCGYC	4 cut(s)	132, 371, 381, 2487
BsaI	GGTCTC	1 cut(s)	170
BsaJI	CCNNGG	3 cut(s)	493, 1638, 2225
BsaWI	WCCGGW	4 cut(s)	598, 823, 915, 1064
BsaXI	ACNNNNNCTCC	6 cut(s)	290, 320, 473, 503, 593, 623
Bsc4I	CCNNNNNNNGG	9 cut(s)	46, 760, 901, 1527, 2339, 2374, 2466, 2497, 2618
Bse118I	RCCGGY	2 cut(s)	915, 2363
Bse1I	ACTGG	5 cut(s)	1862, 2368, 2452, 2588, 2641
Bse3DI	GCAATG	2 cut(s)	850, 1650
Bse8I	GATNNNNATC	3 cut(s)	1078, 2142, 2418
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	5 cut(s)	347, 422, 548, 718, 2226
BseCI	ATCGAT	1 cut(s)	2073
BseDI	CCNNGG	3 cut(s)	493, 1638, 2225
BseGI	GGATG	5 cut(s)	261, 585, 1164, 1866, 2143
BseJI	GATNNNNATC	3 cut(s)	1078, 2142, 2418
BseLI	CCNNNNNNNGG	9 cut(s)	46, 760, 901, 1527, 2339, 2374, 2466, 2497, 2618
BseMI	GCAATG	2 cut(s)	850, 1650
BseMII	CTCAG	8 cut(s)	728, 750, 790, 796, 1724, 1815, 2049, 2627
BseNI	ACTGG	5 cut(s)	1862, 2368, 2452, 2588, 2641
BseSI	GKGCMC	1 cut(s)	247
BseX3I	CGGCCG	1 cut(s)	57
BseXI	GCAGC	9 cut(s)	351, 760, 1543, 1642, 1693, 1771, 1924, 2409, 2538
BsgI	GTGCAG	1 cut(s)	1923
Bsh1236I	CGCG	2 cut(s)	208, 1779
Bsh1285I	CGRYCG	2 cut(s)	60, 699
BshFI	GGCC	7 cut(s)	59, 138, 245, 350, 716, 2367, 2378
BshNI	GGYRCC	1 cut(s)	1462
BshTI	ACCGGT	1 cut(s)	915
BshVI	ATCGAT	1 cut(s)	2073
BsiEI	CGRYCG	2 cut(s)	60, 699
BsiHKAI	GWGCWC	4 cut(s)	26, 465, 2505, 2651
BsiHKCI	CYCGRG	3 cut(s)	173, 492, 2426
BslFI	GGGAC	1 cut(s)	2045
BslI	CCNNNNNNNGG	9 cut(s)	46, 760, 901, 1527, 2339, 2374, 2466, 2497, 2618
BsmAI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BsmBI	CGTCTC	1 cut(s)	1639
BsmFI	GGGAC	1 cut(s)	2045
BsmI	GAATGC	1 cut(s)	1722
BsnI	GGCC	7 cut(s)	59, 138, 245, 350, 716, 2367, 2378
Bso31I	GGTCTC	1 cut(s)	170
BsoBI	CYCGRG	3 cut(s)	173, 492, 2426
Bsp119I	TTCGAA	2 cut(s)	936, 2094
Bsp120I	GGGCCC	1 cut(s)	243
Bsp1286I	GDGCHC	5 cut(s)	26, 247, 465, 2505, 2651
Bsp13I	TCCGGA	1 cut(s)	598
Bsp1407I	TGTACA	1 cut(s)	873
Bsp1720I	GCTNAGC	3 cut(s)	776, 1710, 2516
BspANI	GGCC	7 cut(s)	59, 138, 245, 350, 716, 2367, 2378
BspCNI	CTCAG	8 cut(s)	729, 751, 789, 795, 1723, 1814, 2048, 2626
BspDI	ATCGAT	1 cut(s)	2073
BspEI	TCCGGA	1 cut(s)	598
BspFNI	CGCG	2 cut(s)	208, 1779
BspHI	TCATGA	2 cut(s)	1833, 2536
BspLI	GGNNCC	4 cut(s)	51, 139, 245, 1464
BspMAI	CTGCAG	3 cut(s)	1789, 1881, 2556
BspMI	ACCTGC	1 cut(s)	1639
BspPI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2324
BspQI	GCTCTTC	1 cut(s)	2510
BspT104I	TTCGAA	2 cut(s)	936, 2094
BspT107I	GGYRCC	1 cut(s)	1462
BspTI	CTTAAG	1 cut(s)	2194
BspTNI	GGTCTC	1 cut(s)	170
BsrDI	GCAATG	2 cut(s)	850, 1650
BsrFI	RCCGGY	2 cut(s)	915, 2363
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	5 cut(s)	1862, 2368, 2452, 2588, 2641
BssAI	RCCGGY	2 cut(s)	915, 2363
BssECI	CCNNGG	3 cut(s)	493, 1638, 2225
BssNI	GRCGYC	4 cut(s)	132, 371, 381, 2487
Bst2UI	CCWGG	5 cut(s)	347, 422, 548, 718, 2226
Bst4CI	ACNGT	5 cut(s)	446, 1462, 2053, 2127, 2653
Bst6I	CTCTTC	2 cut(s)	225, 2510
BstACI	GRCGYC	4 cut(s)	132, 371, 381, 2487
BstAFI	CTTAAG	1 cut(s)	2194
BstAPI	GCANNNNNTGC	1 cut(s)	1951
BstAUI	TGTACA	1 cut(s)	873
BstBI	TTCGAA	2 cut(s)	936, 2094
BstC8I	GCNNGC	5 cut(s)	773, 947, 1268, 1777, 2235
BstDEI	CTNAG	9 cut(s)	737, 759, 776, 782, 1710, 1801, 2035, 2516, 2613
BstF5I	GGATG	5 cut(s)	261, 585, 1164, 1866, 2143
BstFNI	CGCG	2 cut(s)	208, 1779
BstH2I	RGCGCY	5 cut(s)	428, 515, 754, 1331, 1599
BstHHI	GCGC	8 cut(s)	210, 427, 514, 624, 753, 1021, 1330, 1598
BstMAI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BstMCI	CGRYCG	2 cut(s)	60, 699
BstNI	CCWGG	5 cut(s)	347, 422, 548, 718, 2226
BstNSI	RCATGY	1 cut(s)	1706
BstPAI	GACNNNNGTC	1 cut(s)	2607
BstSCI	CCNGG	9 cut(s)	164, 240, 345, 420, 546, 716, 1028, 1638, 2224
BstSFI	CTRYAG	3 cut(s)	1785, 1877, 2552
BstSLI	GKGCMC	1 cut(s)	247
BstUI	CGCG	2 cut(s)	208, 1779
BstV1I	GCAGC	9 cut(s)	351, 760, 1543, 1642, 1693, 1771, 1924, 2409, 2538
BstV2I	GAAGAC	2 cut(s)	309, 1797
BstX2I	RGATCY	4 cut(s)	660, 733, 820, 2329
BstYI	RGATCY	4 cut(s)	660, 733, 820, 2329
BstZI	CGGCCG	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	2073
BsuRI	GGCC	7 cut(s)	59, 138, 245, 350, 716, 2367, 2378
BsuTUI	ATCGAT	1 cut(s)	2073
BtgZI	GCGATG	1 cut(s)	1794
BtrI	CACGTC	2 cut(s)	301, 2308
BtsCI	GGATG	5 cut(s)	261, 585, 1164, 1866, 2143
BtsIMutI	CAGTG	4 cut(s)	1633, 1838, 2621, 2649
BveI	ACCTGC	1 cut(s)	1639
Cac8I	GCNNGC	5 cut(s)	773, 947, 1268, 1777, 2235
CaiI	CAGNNNCTG	1 cut(s)	901
CciI	TCATGA	2 cut(s)	1833, 2536
CciNI	GCGGCCGC	1 cut(s)	57
CfoI	GCGC	8 cut(s)	210, 427, 514, 624, 753, 1021, 1330, 1598
Cfr10I	RCCGGY	2 cut(s)	915, 2363
Cfr13I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
ClaI	ATCGAT	1 cut(s)	2073
CpoI	CGGWCCG	1 cut(s)	436
CseI	GACGC	3 cut(s)	389, 2476, 2597
Csp6I	GTAC	3 cut(s)	874, 1282, 2431
CspAI	ACCGGT	1 cut(s)	915
CspCI	CAANNNNNGTGG	2 cut(s)	1632, 1667
CspI	CGGWCCG	1 cut(s)	436
CviQI	GTAC	3 cut(s)	874, 1282, 2431
DdeI	CTNAG	9 cut(s)	737, 759, 776, 782, 1710, 1801, 2035, 2516, 2613
DrdI	GACNNNNNNGTC	1 cut(s)	386
DseDI	GACNNNNNNGTC	1 cut(s)	386
EaeI	YGGCCR	3 cut(s)	57, 714, 2365
EagI	CGGCCG	1 cut(s)	57
Eam1104I	CTCTTC	2 cut(s)	225, 2510
EarI	CTCTTC	2 cut(s)	225, 2510
EciI	GGCGGA	2 cut(s)	100, 185
Ecl136II	GAGCTC	2 cut(s)	24, 463
EclXI	CGGCCG	1 cut(s)	57
Eco24I	GRGCYC	3 cut(s)	26, 247, 465
Eco31I	GGTCTC	1 cut(s)	170
Eco32I	GATATC	2 cut(s)	1080, 1420
Eco47I	GGWCC	3 cut(s)	436, 913, 1062
Eco47III	AGCGCT	1 cut(s)	1329
Eco52I	CGGCCG	1 cut(s)	57
Eco53kI	GAGCTC	2 cut(s)	24, 463
Eco57I	CTGAAG	1 cut(s)	935
Eco88I	CYCGRG	3 cut(s)	173, 492, 2426
EcoICRI	GAGCTC	2 cut(s)	24, 463
EcoRII	CCWGG	5 cut(s)	345, 420, 546, 716, 2224
EcoRV	GATATC	2 cut(s)	1080, 1420
EcoT38I	GRGCYC	3 cut(s)	26, 247, 465
Esp3I	CGTCTC	1 cut(s)	1639
FalI	AAGNNNNNCTT	4 cut(s)	1974, 2006, 2489, 2521
FaqI	GGGAC	1 cut(s)	2045
FauI	CCCGC	2 cut(s)	44, 1784
FbaI	TGATCA	3 cut(s)	1185, 1348, 1908
FblI	GTMKAC	3 cut(s)	273, 566, 795
FokI	GGATG	5 cut(s)	248, 592, 1171, 1873, 2150
FriOI	GRGCYC	3 cut(s)	26, 247, 465
FspBI	CTAG	2 cut(s)	1155, 2259
FspI	TGCGCA	1 cut(s)	1020
GlaI	GCGC	8 cut(s)	209, 426, 513, 623, 752, 1020, 1329, 1597
GsuI	CTGGAG	2 cut(s)	329, 605
HaeII	RGCGCY	5 cut(s)	428, 515, 754, 1331, 1599
HaeIII	GGCC	7 cut(s)	59, 138, 245, 350, 716, 2367, 2378
HgaI	GACGC	3 cut(s)	389, 2476, 2597
HhaI	GCGC	8 cut(s)	210, 427, 514, 624, 753, 1021, 1330, 1598
Hin1I	GRCGYC	4 cut(s)	132, 371, 381, 2487
Hin6I	GCGC	8 cut(s)	208, 425, 512, 622, 751, 1019, 1328, 1596
HinP1I	GCGC	8 cut(s)	208, 425, 512, 622, 751, 1019, 1328, 1596
HincII	GTYRAC	4 cut(s)	274, 418, 859, 2593
HindII	GTYRAC	4 cut(s)	274, 418, 859, 2593
HindIII	AAGCTT	3 cut(s)	705, 947, 1607
HphI	GGTGA	1 cut(s)	640
Hpy188III	TCNNGA	9 cut(s)	471, 492, 599, 995, 1834, 2207, 2259, 2537, 2669
HpyAV	CCTTC	7 cut(s)	151, 166, 394, 628, 845, 2476, 2670
HpyCH4III	ACNGT	5 cut(s)	446, 1462, 2053, 2127, 2653
HpyCH4IV	ACGT	6 cut(s)	132, 300, 371, 402, 414, 2307
HpyF3I	CTNAG	9 cut(s)	737, 759, 776, 782, 1710, 1801, 2035, 2516, 2613
HpySE526I	ACGT	6 cut(s)	132, 300, 371, 402, 414, 2307
Hsp92I	GRCGYC	4 cut(s)	132, 371, 381, 2487
HspAI	GCGC	8 cut(s)	208, 425, 512, 622, 751, 1019, 1328, 1596
Kpn2I	TCCGGA	1 cut(s)	598
Ksp22I	TGATCA	3 cut(s)	1185, 1348, 1908
LguI	GCTCTTC	1 cut(s)	2510
LmnI	GCTCC	8 cut(s)	29, 55, 215, 348, 432, 460, 473, 763
Lsp1109I	GCAGC	9 cut(s)	351, 760, 1543, 1642, 1693, 1771, 1924, 2409, 2538
LweI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
MaeI	CTAG	2 cut(s)	1155, 2259
MaeII	ACGT	6 cut(s)	132, 300, 371, 402, 414, 2307
MaeIII	GTNAC	3 cut(s)	1213, 1404, 2636
MfeI	CAATTG	1 cut(s)	689
MflI	RGATCY	4 cut(s)	660, 733, 820, 2329
MhlI	GDGCHC	5 cut(s)	26, 247, 465, 2505, 2651
MluCI	AATT	7 cut(s)	679, 689, 1085, 1148, 2061, 2185, 2581
MmeI	TCCRAC	7 cut(s)	144, 321, 334, 357, 501, 808, 1723
MroI	TCCGGA	1 cut(s)	598
MroXI	GAANNNNTTC	2 cut(s)	638, 2532
MseI	TTAA	9 cut(s)	573, 921, 1577, 1812, 1968, 2040, 2184, 2195, 2220
MslI	CAYNNNNRTG	2 cut(s)	1388, 2075
MspA1I	CMGCKG	2 cut(s)	364, 1937
MspCI	CTTAAG	1 cut(s)	2194
MspR9I	CCNGG	9 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640, 2226
MunI	CAATTG	1 cut(s)	689
Mva1269I	GAATGC	1 cut(s)	1722
MvaI	CCWGG	5 cut(s)	347, 422, 548, 718, 2226
MvnI	CGCG	2 cut(s)	208, 1779
NciI	CCSGG	4 cut(s)	166, 242, 1030, 1640
NlaIV	GGNNCC	4 cut(s)	51, 139, 245, 1464
NmeAIII	GCCGAG	1 cut(s)	2354
NmuCI	GTSAC	1 cut(s)	1213
NotI	GCGGCCGC	1 cut(s)	57
NsbI	TGCGCA	1 cut(s)	1020
NspI	RCATGY	1 cut(s)	1706
NspV	TTCGAA	2 cut(s)	936, 2094
PaeR7I	CTCGAG	1 cut(s)	2426
PagI	TCATGA	2 cut(s)	1833, 2536
PaqCI	CACCTGC	1 cut(s)	1639
PciSI	GCTCTTC	1 cut(s)	2510
PcsI	WCGNNNNNNNCGW	3 cut(s)	129, 141, 387
PctI	GAATGC	1 cut(s)	1722
PdmI	GAANNNNTTC	2 cut(s)	638, 2532
PfeI	GAWTC	9 cut(s)	329, 595, 604, 741, 1099, 1502, 2096, 2168, 2414
PflMI	CCANNNNNTGG	1 cut(s)	901
PfoI	TCCNGGA	2 cut(s)	164, 546
PinAI	ACCGGT	1 cut(s)	915
Ple19I	CGATCG	1 cut(s)	699
PshAI	GACNNNNGTC	1 cut(s)	2607
Psp124BI	GAGCTC	2 cut(s)	26, 465
Psp6I	CCWGG	5 cut(s)	345, 420, 546, 716, 2224
PspGI	CCWGG	5 cut(s)	345, 420, 546, 716, 2224
PspN4I	GGNNCC	4 cut(s)	51, 139, 245, 1464
PspOMI	GGGCCC	1 cut(s)	243
PspPI	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
PspXI	VCTCGAGB	1 cut(s)	2426
PsrI	GAACNNNNNNTAC	2 cut(s)	1114, 1146
PstI	CTGCAG	3 cut(s)	1789, 1881, 2556
PstNI	CAGNNNCTG	1 cut(s)	901
PsuI	RGATCY	4 cut(s)	660, 733, 820, 2329
PvuI	CGATCG	1 cut(s)	699
RsaI	GTAC	3 cut(s)	875, 1283, 2432
RsaNI	GTAC	3 cut(s)	874, 1282, 2431
RseI	CAYNNNNRTG	2 cut(s)	1388, 2075
Rsr2I	CGGWCCG	1 cut(s)	436
RsrII	CGGWCCG	1 cut(s)	436
SacI	GAGCTC	2 cut(s)	26, 465
SalI	GTCGAC	1 cut(s)	272
SapI	GCTCTTC	1 cut(s)	2510
SaqAI	TTAA	9 cut(s)	573, 921, 1577, 1812, 1968, 2040, 2184, 2195, 2220
Sau96I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
ScrFI	CCNGG	9 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640, 2226
SduI	GDGCHC	5 cut(s)	26, 247, 465, 2505, 2651
SfaNI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
SfcI	CTRYAG	3 cut(s)	1785, 1877, 2552
Sfr274I	CTCGAG	1 cut(s)	2426
SfuI	TTCGAA	2 cut(s)	936, 2094
SgrDI	CGTCGACG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	436, 913, 1062
SlaI	CTCGAG	1 cut(s)	2426
SmiMI	CAYNNNNRTG	2 cut(s)	1388, 2075
SmlI	CTYRAG	6 cut(s)	311, 515, 995, 2194, 2280, 2426
SmoI	CTYRAG	6 cut(s)	311, 515, 995, 2194, 2280, 2426
Sse9I	AATT	7 cut(s)	679, 689, 1085, 1148, 2061, 2185, 2581
SspMI	CTAG	2 cut(s)	1155, 2259
SstI	GAGCTC	2 cut(s)	26, 465
StyD4I	CCNGG	9 cut(s)	164, 240, 345, 420, 546, 716, 1028, 1638, 2224
TaaI	ACNGT	5 cut(s)	446, 1462, 2053, 2127, 2653
TaiI	ACGT	6 cut(s)	135, 303, 374, 405, 417, 2310
TaqII	GACCGA	2 cut(s)	424, 689
TasI	AATT	7 cut(s)	679, 689, 1085, 1148, 2061, 2185, 2581
TatI	WGTACW	2 cut(s)	873, 2430
TauI	GCSGC	4 cut(s)	59, 62, 364, 1479
TfiI	GAWTC	9 cut(s)	329, 595, 604, 741, 1099, 1502, 2096, 2168, 2414
Tru1I	TTAA	9 cut(s)	573, 921, 1577, 1812, 1968, 2040, 2184, 2195, 2220
Tru9I	TTAA	9 cut(s)	573, 921, 1577, 1812, 1968, 2040, 2184, 2195, 2220
TscAI	CASTG	4 cut(s)	1633, 1845, 2621, 2656
TseFI	GTSAC	1 cut(s)	1213
TseI	GCWGC	9 cut(s)	364, 748, 1531, 1655, 1706, 1784, 1937, 2397, 2551
Tsp45I	GTSAC	1 cut(s)	1213
TspDTI	ATGAA	9 cut(s)	250, 647, 1376, 1400, 1504, 1822, 2406, 2525, 2652
TspGWI	ACGGA	4 cut(s)	978, 1337, 2403, 2480
TspRI	CASTG	4 cut(s)	1633, 1845, 2621, 2656
Van91I	CCANNNNNTGG	1 cut(s)	901
Vha464I	CTTAAG	1 cut(s)	2194
VpaK11BI	GGWCC	3 cut(s)	436, 913, 1062
XapI	RAATTY	2 cut(s)	679, 2581
XbaI	TCTAGA	1 cut(s)	2258
XceI	RCATGY	1 cut(s)	1706
XhoI	CTCGAG	1 cut(s)	2426
XmiI	GTMKAC	3 cut(s)	273, 566, 795
XmnI	GAANNNNTTC	2 cut(s)	638, 2532
XspI	CTAG	2 cut(s)	1155, 2259
ZraI	GACGTC	2 cut(s)	133, 372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.