Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009549

Physical Location & Seq

Genomic Coordinates Forward (+)

38611427 .. 38613005

Gene Structure 1579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0242700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGATGCAGACTCCTACTGGTACTATGGCTGTTCGTCCTCCTTCTGATTCCGCCAGGGTGTCTTTGGGCGAGGCGGGGCGGGTAGCGCTGCAAGACAACAACTGGTATATGGTTGGGCGACTGCTGGGGTCGAAGTCGCGGTTTCCTGGGTTCAAGGGCACCATTGCTTCGATCTGGCGTCTCAAGTCCGGTCTCTCTGTTCATGATTCCGGAGATCGATTCCTTTTCCAATTCACTCATGAAGCTGATCGTAATAGAGCGCTGCATGGCGGGCCGTGGTTCTACAGGAACACGATGCTGTTGGTAGGGGATTATGATGGCGTTGGCTCAGTGGAGAGCGTTCCTCTGTGGAAGATGGAGATCTGGATTGCGGTCCAGGGTTTGCCATTGGCCCTTCGCAACAAGCATGCCTTAACCCTAATTGGATCTGCGGTTGGTCAGGTTATTCGATTTGATCAATCGGCTCTTCGTAGGAAGGAGGAGGAGCAGAGGATCCGATTGGTGTTGGATACGCGTCGGAGGGTGCGTACTTGGATGCTCTTTGAATTCTCTCCCACAGTGCAGCCTGAGATTACTCTCATTTATGAGAAAGTTAAGGGATTCTGTAGGGACTGTGGTTTATTTGAGCATGAGGCTTCAGGGTGTGATGGCTTTTTGCTGAAAGAGAAGGCAGAGATTCAGAATGGGCCTCCAGTAGCGACGATGGCCGGGTTGTCATTAGACGTGGGTGTTCTCCCTCTGGAACCAATGCCAGCTCCTATGACGGAACTGATGTCTTCTGCTGAGGTTAGGGGAATGGTTATGGAACTGGAGGTGCAACTGGATGGTAAGTTGCATGGTTCCCATTTGTTGGGAGTGGTGAAAGCCCATGCGTCACAAGGTAGTGACGTGCTGCATGGCTCCAAGATTGATGGAAGTACAATATGTGCATCCTTAGGTTTGATTAAGAACAATGGTGTCGGCTGGTTCAAGAATTGGCAGAAGCTACTCCCAGATGGTGCTAAGTCAGCCACCCTGCCAACCAACGTTTGGACCACAGTGAAGAAAGGCCTTCTGAAGCCGGGGGTTGATTTGGGTTCGACTGGTTTGGTTGCTGCTGGTACCAAGAGAAAAGCGAGCTATGATTTGCTCAATGCGGGTAAGAAGATGTTGTCGCTTCCAGCTCCTGCTCTTAGAGTGGATGAAAACATCGCTTTGGTATTACAACATAAGAATGGGCAGCTTATAATCTCGCCCAAAAAAAAGAAGAAGTTGGGTCGTCCTCGAGGTAGCAAGAATAAGCTGAAGGCTGCTAGGACTTTGGATCAGGAGCTGTCTGAGAGGAAGTCTCGCAAATGGAAGACTCATATTGACTCTGGTGCTGCGCATGAGTCCGCAGGTAGCTTGTCCAAGGACACAGTTATTGCTGAGGCTGAGGCATTAGATACAGAAGGTGATGGAGTTGAGGGTGATTTTGCATCCTCTTCTCCTAGTACTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009875 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0030054 GO:0030154 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0048468 GO:0048544 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060321 GO:0060560 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec15

Protein Analysis

493

Amino Acids

53.7

Weight (kDa)

9.49

Isoelectric Point (pI)

36.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	31 - 102	3.8e-12	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009549)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02350 AT4G02350
fragaria_vesca	FvH4_2g25910 FvH4_2g25910 FvH4_2g25910 FvH4_2g25910
malus_domestica	MD03G1290500.v1.1 MD11G1308000.v1.1
prunus_persica	Prupe.8G263500_v2.0.a1
pyrus_communis	pycom03g22980 pycom11g26930
rosa_chinensis	RchiOBHm_Chr6g0294231
rosa_laevigata	RLG00000011888
rosa_multiflora	Rmu_co8430431.1_g000001 Rmu_sc0002462.1_g000003
rosa_roxburghii	Rroxscaffold_7G00173530
rosa_rugosa	Rorug06G0242700
rosa_samantha	Rh6AG354900 Rh6BG361800 Rh6CG369100 Rh6DG355900
rosa_wichuraiana	Rw6G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1226
AbsI	CCTCGAGG	1 cut(s)	1263
Acc16I	TGCGCA	1 cut(s)	1365
Acc36I	ACCTGC	1 cut(s)	1367
Acc65I	GGTACC	1 cut(s)	1100
AccB1I	GGYRCC	2 cut(s)	158, 1100
AccB7I	CCANNNNNTGG	2 cut(s)	850, 1029
AccII	CGCG	2 cut(s)	139, 514
AccIII	TCCGGA	1 cut(s)	209
AciI	CCGC	9 cut(s)	51, 74, 79, 139, 270, 371, 431, 1136, 1374
AclI	AACGTT	1 cut(s)	1026
AclWI	GGATC	4 cut(s)	433, 487, 500, 1311
AcoI	YGGCCR	1 cut(s)	705
AcsI	RAATTY	1 cut(s)	545
AcuI	CTGAAG	3 cut(s)	621, 1076, 1304
AcyI	GRCGYC	1 cut(s)	178
AfaI	GTAC	5 cut(s)	22, 529, 919, 1102, 1474
AfeI	AGCGCT	2 cut(s)	87, 261
AfiI	CCNNNNNNNGG	2 cut(s)	850, 1029
AflIII	ACRYGT	1 cut(s)	512
AgsI	TTSAA	3 cut(s)	154, 545, 970
AjiI	CACGTC	2 cut(s)	724, 889
AjnI	CCWGG	3 cut(s)	53, 145, 375
AluBI	AGCT	9 cut(s)	245, 755, 985, 1119, 1163, 1222, 1282, 1312, 1383
AluI	AGCT	9 cut(s)	245, 755, 985, 1119, 1163, 1222, 1282, 1312, 1383
Alw26I	GTCTC	3 cut(s)	185, 197, 1332
AlwI	GGATC	4 cut(s)	433, 487, 500, 1311
AlwNI	CAGNNNCTG	2 cut(s)	1166, 1312
Ama87I	CYCGRG	1 cut(s)	1263
Aor13HI	TCCGGA	1 cut(s)	209
Aor51HI	AGCGCT	2 cut(s)	87, 261
AoxI	GGCC	5 cut(s)	272, 390, 686, 705, 1048
ApeKI	GCWGC	8 cut(s)	88, 262, 562, 892, 1094, 1219, 1289, 1361
ApoI	RAATTY	1 cut(s)	545
Asp718I	GGTACC	1 cut(s)	1100
AspLEI	GCGC	3 cut(s)	88, 262, 1366
AspS9I	GGNCC	5 cut(s)	272, 373, 391, 686, 1032
AsuC2I	CCSGG	2 cut(s)	709, 1062
AsuHPI	GGTGA	3 cut(s)	871, 1445, 1460
AvaI	CYCGRG	1 cut(s)	1263
AvaII	GGWCC	2 cut(s)	373, 1032
AxyI	CCTNAGG	1 cut(s)	934
BaeGI	GKGCMC	1 cut(s)	161
BamHI	GGATCC	1 cut(s)	492
BanI	GGYRCC	2 cut(s)	158, 1100
BbsI	GAAGAC	2 cut(s)	768, 1346
BbvCI	CCTCAGC	3 cut(s)	783, 1407, 1413
BbvI	GCAGC	8 cut(s)	75, 249, 574, 879, 1081, 1231, 1276, 1348
BccI	CCATC	8 cut(s)	311, 349, 641, 697, 818, 905, 989, 1430
BceAI	ACGGC	1 cut(s)	259
BciT130I	CCWGG	3 cut(s)	55, 147, 377
BciVI	GTATCC	1 cut(s)	502
BclI	TGATCA	1 cut(s)	454
BcnI	CCSGG	2 cut(s)	709, 1062
BcoDI	GTCTC	3 cut(s)	185, 197, 1332
BfaI	CTAG	2 cut(s)	1293, 1470
BfmI	CTRYAG	2 cut(s)	283, 604
BfoI	RGCGCY	2 cut(s)	89, 263
BfuAI	ACCTGC	1 cut(s)	1367
BfuI	GTATCC	1 cut(s)	502
BglII	AGATCT	1 cut(s)	360
BisI	GCNGC	8 cut(s)	89, 263, 563, 893, 1095, 1220, 1290, 1362
BlsI	GCNGC	8 cut(s)	90, 264, 564, 894, 1096, 1221, 1291, 1363
BmcAI	AGTACT	1 cut(s)	1474
Bme1390I	CCNGG	5 cut(s)	55, 147, 377, 709, 1062
Bme18I	GGWCC	2 cut(s)	373, 1032
BmeT110I	CYCGRG	1 cut(s)	1263
BmgBI	CACGTC	2 cut(s)	724, 889
BmgT120I	GGNCC	5 cut(s)	272, 373, 391, 686, 1032
BmiI	GGNNCC	6 cut(s)	160, 494, 744, 841, 901, 1102
BmrFI	CCNGG	5 cut(s)	55, 147, 377, 709, 1062
BmsI	GCATC	4 cut(s)	285, 525, 938, 1466
BpiI	GAAGAC	2 cut(s)	768, 1346
BplI	GAGNNNNNCTC	4 cut(s)	328, 360, 1312, 1344
BpmI	CTGGAG	2 cut(s)	675, 830
Bpu10I	CCTNAGC	3 cut(s)	783, 1407, 1413
BpuEI	CTTGAG	1 cut(s)	167
BpuMI	CCSGG	2 cut(s)	709, 1062
Bsa29I	ATCGAT	1 cut(s)	217
BsaBI	GATNNNNATC	1 cut(s)	359
BsaHI	GRCGYC	1 cut(s)	178
BsaI	GGTCTC	1 cut(s)	197
BsaJI	CCNNGG	6 cut(s)	54, 146, 275, 376, 1061, 1389
BsaWI	WCCGGW	2 cut(s)	188, 209
BsaXI	ACNNNNNCTCC	2 cut(s)	511, 541
Bsc4I	CCNNNNNNNGG	2 cut(s)	850, 1029
Bse1I	ACTGG	6 cut(s)	22, 107, 692, 813, 825, 1087
Bse21I	CCTNAGG	1 cut(s)	934
Bse3DI	GCAATG	1 cut(s)	162
Bse8I	GATNNNNATC	1 cut(s)	359
BseAI	TCCGGA	1 cut(s)	209
BseBI	CCWGG	3 cut(s)	55, 147, 377
BseCI	ATCGAT	1 cut(s)	217
BseDI	CCNNGG	6 cut(s)	54, 146, 275, 376, 1061, 1389
BseGI	GGATG	5 cut(s)	540, 829, 929, 1186, 1457
BseJI	GATNNNNATC	1 cut(s)	359
BseLI	CCNNNNNNNGG	2 cut(s)	850, 1029
BseMI	GCAATG	1 cut(s)	162
BseMII	CTCAG	6 cut(s)	342, 558, 774, 1308, 1398, 1404
BseNI	ACTGG	6 cut(s)	22, 107, 692, 813, 825, 1087
BseRI	GAGGAG	2 cut(s)	494, 497
BseSI	GKGCMC	1 cut(s)	161
BseXI	GCAGC	8 cut(s)	75, 249, 574, 879, 1081, 1231, 1276, 1348
BseYI	CCCAGC	1 cut(s)	124
BsgI	GTGCAG	1 cut(s)	581
Bsh1236I	CGCG	2 cut(s)	139, 514
BshFI	GGCC	5 cut(s)	274, 392, 688, 707, 1050
BshNI	GGYRCC	2 cut(s)	158, 1100
BshVI	ATCGAT	1 cut(s)	217
BsiHKCI	CYCGRG	1 cut(s)	1263
BsiSI	CCGG	4 cut(s)	189, 210, 708, 1061
BslFI	GGGAC	1 cut(s)	623
BslI	CCNNNNNNNGG	2 cut(s)	850, 1029
BsmAI	GTCTC	3 cut(s)	185, 197, 1332
BsmBI	CGTCTC	1 cut(s)	185
BsmFI	GGGAC	1 cut(s)	623
BsnI	GGCC	5 cut(s)	274, 392, 688, 707, 1050
Bso31I	GGTCTC	1 cut(s)	197
BsoBI	CYCGRG	1 cut(s)	1263
Bsp1286I	GDGCHC	1 cut(s)	161
Bsp13I	TCCGGA	1 cut(s)	209
Bsp143I	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
BspACI	CCGC	9 cut(s)	51, 74, 79, 139, 270, 371, 431, 1136, 1374
BspANI	GGCC	5 cut(s)	274, 392, 688, 707, 1050
BspCNI	CTCAG	6 cut(s)	341, 559, 775, 1309, 1399, 1405
BspDI	ATCGAT	1 cut(s)	217
BspEI	TCCGGA	1 cut(s)	209
BspFNI	CGCG	2 cut(s)	139, 514
BspHI	TCATGA	2 cut(s)	202, 238
BspLI	GGNNCC	6 cut(s)	160, 494, 744, 841, 901, 1102
BspMI	ACCTGC	1 cut(s)	1367
BspPI	GGATC	4 cut(s)	433, 487, 500, 1311
BspQI	GCTCTTC	1 cut(s)	471
BspT107I	GGYRCC	2 cut(s)	158, 1100
BspTNI	GGTCTC	1 cut(s)	197
BsrDI	GCAATG	1 cut(s)	162
BsrI	ACTGG	6 cut(s)	22, 107, 692, 813, 825, 1087
BssECI	CCNNGG	6 cut(s)	54, 146, 275, 376, 1061, 1389
BssMI	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
BssNI	GRCGYC	1 cut(s)	178
BssT1I	CCWWGG	1 cut(s)	1389
Bst2UI	CCWGG	3 cut(s)	55, 147, 377
Bst4CI	ACNGT	4 cut(s)	559, 614, 1039, 1399
Bst6I	CTCTTC	2 cut(s)	471, 1468
BstACI	GRCGYC	1 cut(s)	178
BstC8I	GCNNGC	4 cut(s)	272, 408, 753, 1117
BstDEI	CTNAG	9 cut(s)	328, 567, 783, 934, 1002, 1172, 1317, 1407, 1413
BstDSI	CCRYGG	1 cut(s)	275
BstF5I	GGATG	5 cut(s)	540, 829, 929, 1186, 1457
BstFNI	CGCG	2 cut(s)	139, 514
BstH2I	RGCGCY	2 cut(s)	89, 263
BstHHI	GCGC	3 cut(s)	88, 262, 1366
BstKTI	GATC	8 cut(s)	174, 217, 250, 363, 428, 457, 495, 1306
BstMAI	GTCTC	3 cut(s)	185, 197, 1332
BstMBI	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
BstMWI	GCNNNNNNNGC	4 cut(s)	85, 271, 704, 1007
BstNI	CCWGG	3 cut(s)	55, 147, 377
BstNSI	RCATGY	1 cut(s)	410
BstSCI	CCNGG	5 cut(s)	53, 145, 375, 707, 1060
BstSFI	CTRYAG	2 cut(s)	283, 604
BstSLI	GKGCMC	1 cut(s)	161
BstUI	CGCG	2 cut(s)	139, 514
BstV1I	GCAGC	8 cut(s)	75, 249, 574, 879, 1081, 1231, 1276, 1348
BstV2I	GAAGAC	2 cut(s)	768, 1346
BstX2I	RGATCY	3 cut(s)	360, 425, 492
BstYI	RGATCY	3 cut(s)	360, 425, 492
Bsu15I	ATCGAT	1 cut(s)	217
Bsu36I	CCTNAGG	1 cut(s)	934
BsuI	GTATCC	1 cut(s)	502
BsuRI	GGCC	5 cut(s)	274, 392, 688, 707, 1050
BsuTUI	ATCGAT	1 cut(s)	217
BtgI	CCRYGG	1 cut(s)	275
BtgZI	GCGATG	1 cut(s)	1174
BtrI	CACGTC	2 cut(s)	724, 889
BtsCI	GGATG	5 cut(s)	540, 829, 929, 1186, 1457
BtsIMutI	CAGTG	3 cut(s)	336, 564, 1044
BveI	ACCTGC	1 cut(s)	1367
Cac8I	GCNNGC	4 cut(s)	272, 408, 753, 1117
CaiI	CAGNNNCTG	2 cut(s)	1166, 1312
CciI	TCATGA	2 cut(s)	202, 238
CfoI	GCGC	3 cut(s)	88, 262, 1366
Cfr13I	GGNCC	5 cut(s)	272, 373, 391, 686, 1032
ClaI	ATCGAT	1 cut(s)	217
CseI	GACGC	3 cut(s)	167, 503, 861
Csp6I	GTAC	5 cut(s)	21, 528, 918, 1101, 1473
CviAII	CATG	9 cut(s)	203, 239, 266, 407, 629, 836, 869, 896, 1367
CviQI	GTAC	5 cut(s)	21, 528, 918, 1101, 1473
DdeI	CTNAG	9 cut(s)	328, 567, 783, 934, 1002, 1172, 1317, 1407, 1413
DpnI	GATC	8 cut(s)	173, 216, 249, 362, 427, 456, 494, 1305
DpnII	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
EaeI	YGGCCR	1 cut(s)	705
Eam1104I	CTCTTC	2 cut(s)	471, 1468
EarI	CTCTTC	2 cut(s)	471, 1468
EciI	GGCGGA	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	1389
Eco147I	AGGCCT	1 cut(s)	1050
Eco31I	GGTCTC	1 cut(s)	197
Eco47I	GGWCC	2 cut(s)	373, 1032
Eco47III	AGCGCT	2 cut(s)	87, 261
Eco57I	CTGAAG	3 cut(s)	621, 1076, 1304
Eco81I	CCTNAGG	1 cut(s)	934
Eco88I	CYCGRG	1 cut(s)	1263
EcoRI	GAATTC	1 cut(s)	545
EcoRII	CCWGG	3 cut(s)	53, 145, 375
EcoT14I	CCWWGG	1 cut(s)	1389
ErhI	CCWWGG	1 cut(s)	1389
Esp3I	CGTCTC	1 cut(s)	185
FaeI	CATG	9 cut(s)	206, 242, 269, 410, 632, 839, 872, 899, 1370
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	1 cut(s)	623
FatI	CATG	9 cut(s)	202, 238, 265, 406, 628, 835, 868, 895, 1366
FauI	CCCGC	4 cut(s)	67, 72, 263, 1129
FbaI	TGATCA	1 cut(s)	454
Fnu4HI	GCNGC	8 cut(s)	89, 263, 563, 893, 1095, 1220, 1290, 1362
FokI	GGATG	5 cut(s)	547, 836, 916, 1193, 1444
Fsp4HI	GCNGC	8 cut(s)	89, 263, 563, 893, 1095, 1220, 1290, 1362
FspBI	CTAG	2 cut(s)	1293, 1470
FspI	TGCGCA	1 cut(s)	1365
GlaI	GCGC	3 cut(s)	87, 261, 1365
GluI	GCNGC	8 cut(s)	89, 263, 563, 893, 1095, 1220, 1290, 1362
GsaI	CCCAGC	1 cut(s)	128
GsuI	CTGGAG	2 cut(s)	675, 830
HaeII	RGCGCY	2 cut(s)	89, 263
HaeIII	GGCC	5 cut(s)	274, 392, 688, 707, 1050
HapII	CCGG	4 cut(s)	189, 210, 708, 1061
HgaI	GACGC	3 cut(s)	167, 503, 861
HhaI	GCGC	3 cut(s)	88, 262, 1366
Hin1I	GRCGYC	1 cut(s)	178
Hin1II	CATG	9 cut(s)	206, 242, 269, 410, 632, 839, 872, 899, 1370
Hin6I	GCGC	3 cut(s)	86, 260, 1364
HinP1I	GCGC	3 cut(s)	86, 260, 1364
HinfI	GANTC	9 cut(s)	10, 47, 206, 219, 600, 676, 1342, 1352, 1370
HpaII	CCGG	4 cut(s)	189, 210, 708, 1061
HphI	GGTGA	3 cut(s)	871, 1445, 1460
Hpy188I	TCNGA	6 cut(s)	46, 497, 519, 681, 1056, 1318
Hpy188III	TCNNGA	7 cut(s)	203, 210, 239, 364, 740, 970, 1307
Hpy99I	CGWCG	2 cut(s)	519, 703
HpyAV	CCTTC	7 cut(s)	51, 404, 469, 661, 1061, 1279, 1424
HpyCH4III	ACNGT	4 cut(s)	559, 614, 1039, 1399
HpyCH4IV	ACGT	3 cut(s)	723, 888, 1026
HpyCH4V	TGCA	9 cut(s)	7, 91, 265, 562, 817, 835, 895, 929, 1457
HpyF10VI	GCNNNNNNNGC	4 cut(s)	85, 271, 704, 1007
HpyF3I	CTNAG	9 cut(s)	328, 567, 783, 934, 1002, 1172, 1317, 1407, 1413
HpySE526I	ACGT	3 cut(s)	723, 888, 1026
Hsp92I	GRCGYC	1 cut(s)	178
Hsp92II	CATG	9 cut(s)	206, 242, 269, 410, 632, 839, 872, 899, 1370
HspAI	GCGC	3 cut(s)	86, 260, 1364
Kpn2I	TCCGGA	1 cut(s)	209
KpnI	GGTACC	1 cut(s)	1104
Ksp22I	TGATCA	1 cut(s)	454
Kzo9I	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
LguI	GCTCTTC	1 cut(s)	471
LmnI	GCTCC	5 cut(s)	484, 760, 905, 1168, 1309
Lsp1109I	GCAGC	8 cut(s)	75, 249, 574, 879, 1081, 1231, 1276, 1348
LweI	GCATC	4 cut(s)	285, 525, 938, 1466
MaeI	CTAG	2 cut(s)	1293, 1470
MaeII	ACGT	3 cut(s)	723, 888, 1026
MaeIII	GTNAC	2 cut(s)	873, 884
MalI	GATC	8 cut(s)	173, 216, 249, 362, 427, 456, 494, 1305
MboI	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
MboII	GAAGA	8 cut(s)	364, 458, 768, 1054, 1156, 1258, 1351, 1455
MflI	RGATCY	3 cut(s)	360, 425, 492
MhlI	GDGCHC	1 cut(s)	161
MluCI	AATT	4 cut(s)	230, 420, 545, 973
MluI	ACGCGT	1 cut(s)	512
MlyI	GAGTC	4 cut(s)	4, 1336, 1346, 1379
MmeI	TCCRAC	2 cut(s)	486, 497
MroI	TCCGGA	1 cut(s)	209
MseI	TTAA	4 cut(s)	413, 594, 945, 1480
MslI	CAYNNNNRTG	1 cut(s)	1212
MspI	CCGG	4 cut(s)	189, 210, 708, 1061
MspR9I	CCNGG	5 cut(s)	55, 147, 377, 709, 1062
MvaI	CCWGG	3 cut(s)	55, 147, 377
MvnI	CGCG	2 cut(s)	139, 514
MwoI	GCNNNNNNNGC	4 cut(s)	85, 271, 704, 1007
NciI	CCSGG	2 cut(s)	709, 1062
NdeII	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
NlaIII	CATG	9 cut(s)	206, 242, 269, 410, 632, 839, 872, 899, 1370
NlaIV	GGNNCC	6 cut(s)	160, 494, 744, 841, 901, 1102
NmuCI	GTSAC	2 cut(s)	873, 884
NsbI	TGCGCA	1 cut(s)	1365
NspI	RCATGY	1 cut(s)	410
PaeI	GCATGC	1 cut(s)	410
PaeR7I	CTCGAG	1 cut(s)	1263
PagI	TCATGA	2 cut(s)	202, 238
PceI	AGGCCT	1 cut(s)	1050
PciSI	GCTCTTC	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	1 cut(s)	523
PfeI	GAWTC	5 cut(s)	47, 206, 219, 600, 676
PflMI	CCANNNNNTGG	2 cut(s)	850, 1029
PkrI	GCNGC	8 cut(s)	90, 264, 564, 894, 1096, 1221, 1291, 1363
PleI	GAGTC	4 cut(s)	4, 1336, 1346, 1378
PpsI	GAGTC	4 cut(s)	4, 1336, 1346, 1378
PsiI	TTATAA	1 cut(s)	1226
Psp1406I	AACGTT	1 cut(s)	1026
Psp6I	CCWGG	3 cut(s)	53, 145, 375
PspFI	CCCAGC	1 cut(s)	124
PspGI	CCWGG	3 cut(s)	53, 145, 375
PspN4I	GGNNCC	6 cut(s)	160, 494, 744, 841, 901, 1102
PspPI	GGNCC	5 cut(s)	272, 373, 391, 686, 1032
PspXI	VCTCGAGB	1 cut(s)	1263
PstNI	CAGNNNCTG	2 cut(s)	1166, 1312
PsuI	RGATCY	3 cut(s)	360, 425, 492
RsaI	GTAC	5 cut(s)	22, 529, 919, 1102, 1474
RsaNI	GTAC	5 cut(s)	21, 528, 918, 1101, 1473
RseI	CAYNNNNRTG	1 cut(s)	1212
SapI	GCTCTTC	1 cut(s)	471
SaqAI	TTAA	4 cut(s)	413, 594, 945, 1480
SatI	GCNGC	8 cut(s)	89, 263, 563, 893, 1095, 1220, 1290, 1362
Sau3AI	GATC	8 cut(s)	171, 214, 247, 360, 425, 454, 492, 1303
Sau96I	GGNCC	5 cut(s)	272, 373, 391, 686, 1032
ScaI	AGTACT	1 cut(s)	1474
SchI	GAGTC	4 cut(s)	4, 1336, 1346, 1379
ScrFI	CCNGG	5 cut(s)	55, 147, 377, 709, 1062
SduI	GDGCHC	1 cut(s)	161
SfaNI	GCATC	4 cut(s)	285, 525, 938, 1466
SfcI	CTRYAG	2 cut(s)	283, 604
Sfr274I	CTCGAG	1 cut(s)	1263
SinI	GGWCC	2 cut(s)	373, 1032
SlaI	CTCGAG	1 cut(s)	1263
SmiMI	CAYNNNNRTG	1 cut(s)	1212
SmlI	CTYRAG	2 cut(s)	182, 1263
SmoI	CTYRAG	2 cut(s)	182, 1263
SphI	GCATGC	1 cut(s)	410
Sse9I	AATT	4 cut(s)	230, 420, 545, 973
SseBI	AGGCCT	1 cut(s)	1050
SsiI	CCGC	9 cut(s)	51, 74, 79, 139, 270, 371, 431, 1136, 1374
SspMI	CTAG	2 cut(s)	1293, 1470
StuI	AGGCCT	1 cut(s)	1050
StyD4I	CCNGG	5 cut(s)	53, 145, 375, 707, 1060
StyI	CCWWGG	1 cut(s)	1389
TaaI	ACNGT	4 cut(s)	559, 614, 1039, 1399
TaiI	ACGT	3 cut(s)	726, 891, 1029
TaqI	TCGA	6 cut(s)	131, 170, 217, 448, 1079, 1264
TasI	AATT	4 cut(s)	230, 420, 545, 973
TatI	WGTACW	2 cut(s)	917, 1472
TfiI	GAWTC	5 cut(s)	47, 206, 219, 600, 676
Tru1I	TTAA	4 cut(s)	413, 594, 945, 1480
Tru9I	TTAA	4 cut(s)	413, 594, 945, 1480
TscAI	CASTG	3 cut(s)	336, 564, 1044
TseFI	GTSAC	2 cut(s)	873, 884
TseI	GCWGC	8 cut(s)	88, 262, 562, 892, 1094, 1219, 1289, 1361
Tsp45I	GTSAC	2 cut(s)	873, 884
TspDTI	ATGAA	3 cut(s)	191, 255, 1197
TspGWI	ACGGA	1 cut(s)	779
TspRI	CASTG	3 cut(s)	336, 564, 1044
Van91I	CCANNNNNTGG	2 cut(s)	850, 1029
VpaK11BI	GGWCC	2 cut(s)	373, 1032
XapI	RAATTY	1 cut(s)	545
XceI	RCATGY	1 cut(s)	410
XcmI	CCANNNNNNNNNTGG	2 cut(s)	61, 1026
XhoI	CTCGAG	1 cut(s)	1263
XspI	CTAG	2 cut(s)	1293, 1470
ZrmI	AGTACT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.