Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009549

Physical Location & Seq

Genomic Coordinates Reverse (-)

55002081 .. 55005603

Gene Structure 3523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G030930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGAGCTCTGCTCCCGATCCAACTACCACCTCTCCCGAGGCAACTTCTACATGGCGCTCAAGTGTGTGGACACAATCGAGTGCGTGTTCCTGGACAAAACGCCGTCGTCTACGATTAAGCGGATGCTGGAGAAGAAGATTCCGGAGATTCGGTGGCAAATCGAGCGCAAGGTGATGAAGGACTTCAACGATTGGCTGGTGGAGATCCGAGTGGTGTGCCGGAATTTAGGTCAATTGGCGATCGGTCAAGCTTCGTCGGCCAGGCAAAGAGAGGAGGATCTGAGAATCAAGCAGCGCCAAGCTGAGGAGCAGAGCAGGCTCAGCCTCAGAGATTGTGTCTACGCTTTGGAGGAGGAGGACGAAGATCCGGTTGGAGATGATAGTAGCAATGGCGAAGGGGTTGACTTGACTCCATTGTACAGAGCCTATCATATACACCAGACTCTGGGAGTTGAGGACCGGTTTAAGCAGTATTACTTCGAAAATCGCAAGCTTCAGCTCACTTCGGATTTTCAGGTATCTTCCATGACTCCGTTTCTTGAGTCTCATCAGACTTTCTTTGCGCAAATCGCCGGGTTTTTTATTGTGGAGGATAGAGTTGTGAGGACCGGAGGTGGATTGATATCGAAATTGGAGGTTGAGAATCTGTGGGAGACTGCTGTGAGTAAAATGTGTTCAGTTTTAGAGGATCAATTTTCTAGGATGCAGACTGCCAACCATTTGTTGCTGATCAAGGACTATGTGAGCTTGTTAGGTGTGACTTTGCGGAGGTATGGATATTTGGTTGATCCTTTGCTTGATGTGTTGAGCAAGCACAGGGATAAGTACCATGAGTTGCTATTATCGGATTGTAGAAAGCAGATTACGGAAGCGCTTTCTGCGGATAAGTTTGATCAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCGTTTCAGTTACAGACTTCTGATATCACACCAGCTTTTCCTTATGTTGCACCCTTTAGCTCTACGGTGCCTGATTGTTGCCGCATTGTGCGGTCTTTTATTGAGGATTCTGTGAGTTTCATGTCCTATGGTGGGCAGCTTGATTTCTTTGAGGTTGTGAAGAAGTATTTGGATCGGCTATTAAGTGAGGATTTAGATGGCGCTCTTGTGAAGCTTATCAATACATCTGTCAGTGCCGTCTCCCCGGCAATGCAGGTGGCTGCTAATATGGCTGTCATGGAGAGAGCTTGTGATTTCTTCTTCCGACATGCTGCTCAGCTTTCTGGCATTCCTTTGAGAATGGTGGAGAGGGGCAGGAGGCAGTTTCCGCTATGTAAAGCCCGCGATGCTGCAGAAGACATACTCTCAGGGTTGCTTAAACAAAAAGTTGATGGGTTCATGACACTGATGGAGAGTGTGAACTGGATGGCTGATGAGACTCTGCAGAATGGGAATGAGTATGTGAATGAGCTGATCATATATTTGGAAACTCTGGTTTCTGCTGCACAGCAGATATTGCCACCAAATGTTCTTAAACGAGTTATACAAGATGTTCTTTCTCATATATCGGAGAAGATAGTTGGGGCTTTACTTGGGGACTCAGTTAAGAGGTTTACTGTAAATGCAATTATGAGCATCGATGTGGACATTCGGGTATTCGAATCTTTTGCAGATAATCAAGCACCTTTACTGTCAGAGGAGGATGCAAATCAGTTGAAATCGGCACTTGCTGAATCAAGGCAGTTGGTTAATTTACTCTTAAGCAACAATCCAGAGACTTTTCTTAATCCTGTAATCAGGGAGAGGAGTTATAATAACTTGGATTATAGAAAAGTAGTGATTATTTCAGAAAAATTGAGAGATCCTTCAGAGCGGCTATTTGGAACTTTTGGAAGCAGGGGAAGCAGGCAGAACCCAAAGAAGAAATCTCTAGATTTGTTGATAAAAAGACTCAAGGATATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0007154 GO:0008037 GO:0008150 GO:0009506 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009875 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0030054 GO:0030154 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0048468 GO:0048544 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060321 GO:0060560 GO:0070062 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec15

Protein Analysis

648

Amino Acids

74.18

Weight (kDa)

5.65

Isoelectric Point (pI)

44.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EXOC6_Sec15_N	PF20651	1 - 81	7.7e-18	Exocyst complex component EXOC6/Sec15, N-terminal
Sec15_C	PF04091	264 - 611	5e-91	Exocyst complex subunit Sec15 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009549)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02350 AT4G02350
fragaria_vesca	FvH4_2g25910 FvH4_2g25910 FvH4_2g25910 FvH4_2g25910
malus_domestica	MD03G1290500.v1.1 MD11G1308000.v1.1
prunus_persica	Prupe.8G263500_v2.0.a1
pyrus_communis	pycom03g22980 pycom11g26930
rosa_chinensis	RchiOBHm_Chr6g0294231
rosa_laevigata	RLG00000011888
rosa_multiflora	Rmu_co8430431.1_g000001 Rmu_sc0002462.1_g000003
rosa_roxburghii	Rroxscaffold_7G00173530
rosa_rugosa	Rorug06G0242700
rosa_samantha	Rh6AG354900 Rh6BG361800 Rh6CG369100 Rh6DG355900
rosa_wichuraiana	Rw6G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1791
AarI	CACCTGC	1 cut(s)	1183
Acc16I	TGCGCA	1 cut(s)	564
Acc36I	ACCTGC	1 cut(s)	1183
AccB1I	GGYRCC	1 cut(s)	1006
AccB7I	CCANNNNNTGG	1 cut(s)	445
AccBSI	CCGCTC	1 cut(s)	1852
AccI	GTMKAC	2 cut(s)	110, 339
AccII	CGCG	1 cut(s)	1323
AccIII	TCCGGA	1 cut(s)	142
AciI	CCGC	8 cut(s)	121, 766, 881, 1021, 1030, 1307, 1321, 1852
AclWI	GGATC	8 cut(s)	12, 199, 285, 359, 696, 782, 1119, 1835
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	1 cut(s)	223
AcuI	CTGAAG	2 cut(s)	479, 1830
AfaI	GTAC	2 cut(s)	419, 827
AfeI	AGCGCT	1 cut(s)	873
AfiI	CCNNNNNNNGG	3 cut(s)	304, 445, 1071
AflII	CTTAAG	1 cut(s)	1738
AgeI	ACCGGT	1 cut(s)	459
AgsI	TTSAA	2 cut(s)	187, 1696
AjnI	CCWGG	2 cut(s)	90, 260
AjuI	GAANNNNNNNTTGG	4 cut(s)	354, 386, 1091, 1123
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	5 cut(s)	549, 647, 1183, 1409, 1748
AlwI	GGATC	8 cut(s)	12, 199, 285, 359, 696, 782, 1119, 1835
AlwNI	CAGNNNCTG	1 cut(s)	445
Ama87I	CYCGRG	1 cut(s)	36
Aor13HI	TCCGGA	1 cut(s)	142
Aor51HI	AGCGCT	1 cut(s)	873
AoxI	GGCC	1 cut(s)	258
ApeKI	GCWGC	6 cut(s)	292, 1075, 1199, 1250, 1328, 1481
ApoI	RAATTY	1 cut(s)	223
AsiGI	ACCGGT	1 cut(s)	459
Asp700I	GAANNNNTTC	1 cut(s)	182
AspLEI	GCGC	6 cut(s)	58, 168, 297, 565, 874, 1142
AspS9I	GGNCC	2 cut(s)	457, 606
AsuC2I	CCSGG	2 cut(s)	574, 1184
AsuHPI	GGTGA	1 cut(s)	184
AsuII	TTCGAA	2 cut(s)	480, 1638
AvaI	CYCGRG	1 cut(s)	36
AvaII	GGWCC	2 cut(s)	457, 606
BanI	GGYRCC	1 cut(s)	1006
BanII	GRGCYC	1 cut(s)	9
BbsI	GAAGAC	1 cut(s)	1341
Bbv12I	GWGCWC	1 cut(s)	9
BbvCI	CCTCAGC	1 cut(s)	303
BbvI	GCAGC	6 cut(s)	304, 1087, 1186, 1237, 1315, 1468
BccI	CCATC	4 cut(s)	1130, 1364, 1381, 1399
BceAI	ACGGC	2 cut(s)	88, 1160
BcgI	CGANNNNNNTGC	4 cut(s)	198, 232, 1628, 1662
BciT130I	CCWGG	2 cut(s)	92, 262
BclI	TGATCA	3 cut(s)	729, 892, 1452
BcnI	CCSGG	2 cut(s)	574, 1184
BcoDI	GTCTC	5 cut(s)	549, 647, 1183, 1409, 1748
BfaI	CTAG	2 cut(s)	699, 1910
BfmI	CTRYAG	2 cut(s)	1329, 1421
BfoI	RGCGCY	4 cut(s)	59, 298, 875, 1143
BfrI	CTTAAG	1 cut(s)	1738
BfuAI	ACCTGC	1 cut(s)	1183
BisI	GCNGC	8 cut(s)	293, 1021, 1076, 1200, 1251, 1329, 1482, 1853
BlpI	GCTNAGC	2 cut(s)	320, 1254
BlsI	GCNGC	8 cut(s)	294, 1022, 1077, 1201, 1252, 1330, 1483, 1854
Bme1390I	CCNGG	4 cut(s)	92, 262, 574, 1184
Bme18I	GGWCC	2 cut(s)	457, 606
BmeT110I	CYCGRG	1 cut(s)	36
BmgT120I	GGNCC	2 cut(s)	457, 606
BmiI	GGNNCC	1 cut(s)	1008
BmrFI	CCNGG	4 cut(s)	92, 262, 574, 1184
BmsI	GCATC	5 cut(s)	114, 693, 1315, 1623, 1672
BpiI	GAAGAC	1 cut(s)	1341
BplI	GAGNNNNNCTC	1 cut(s)	28
BpmI	CTGGAG	1 cut(s)	149
Bpu10I	CCTNAGC	1 cut(s)	303
Bpu1102I	GCTNAGC	2 cut(s)	320, 1254
Bpu14I	TTCGAA	2 cut(s)	480, 1638
BpuEI	CTTGAG	3 cut(s)	44, 560, 1916
BpuMI	CCSGG	2 cut(s)	574, 1184
Bsa29I	ATCGAT	1 cut(s)	1617
BsaBI	GATNNNNATC	2 cut(s)	622, 1686
BsaJI	CCNNGG	2 cut(s)	37, 1182
BsaWI	WCCGGW	4 cut(s)	142, 367, 459, 608
BsaXI	ACNNNNNCTCC	4 cut(s)	17, 47, 137, 167
Bsc4I	CCNNNNNNNGG	3 cut(s)	304, 445, 1071
Bse118I	RCCGGY	1 cut(s)	459
Bse1I	ACTGG	1 cut(s)	1406
Bse3DI	GCAATG	2 cut(s)	394, 1194
Bse8I	GATNNNNATC	2 cut(s)	622, 1686
BseAI	TCCGGA	1 cut(s)	142
BseBI	CCWGG	2 cut(s)	92, 262
BseCI	ATCGAT	1 cut(s)	1617
BseDI	CCNNGG	2 cut(s)	37, 1182
BseGI	GGATG	4 cut(s)	129, 708, 1410, 1687
BseJI	GATNNNNATC	2 cut(s)	622, 1686
BseLI	CCNNNNNNNGG	3 cut(s)	304, 445, 1071
BseMI	GCAATG	2 cut(s)	394, 1194
BseMII	CTCAG	7 cut(s)	272, 294, 334, 340, 1268, 1359, 1593
BseNI	ACTGG	1 cut(s)	1406
BseRI	GAGGAG	6 cut(s)	287, 320, 365, 368, 1691, 1798
BseXI	GCAGC	6 cut(s)	304, 1087, 1186, 1237, 1315, 1468
BsgI	GTGCAG	1 cut(s)	1467
Bsh1236I	CGCG	1 cut(s)	1323
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	1 cut(s)	260
BshNI	GGYRCC	1 cut(s)	1006
BshTI	ACCGGT	1 cut(s)	459
BshVI	ATCGAT	1 cut(s)	1617
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	36
BsiSI	CCGG	7 cut(s)	143, 220, 368, 460, 573, 609, 1184
BslFI	GGGAC	1 cut(s)	1589
BslI	CCNNNNNNNGG	3 cut(s)	304, 445, 1071
BsmAI	GTCTC	5 cut(s)	549, 647, 1183, 1409, 1748
BsmBI	CGTCTC	1 cut(s)	1183
BsmFI	GGGAC	1 cut(s)	1589
BsmI	GAATGC	1 cut(s)	1266
BsnI	GGCC	1 cut(s)	260
BsoBI	CYCGRG	1 cut(s)	36
Bsp119I	TTCGAA	2 cut(s)	480, 1638
Bsp1286I	GDGCHC	1 cut(s)	9
Bsp13I	TCCGGA	1 cut(s)	142
Bsp1407I	TGTACA	1 cut(s)	417
Bsp1720I	GCTNAGC	2 cut(s)	320, 1254
BspACI	CCGC	8 cut(s)	121, 766, 881, 1021, 1030, 1307, 1321, 1852
BspANI	GGCC	1 cut(s)	260
BspCNI	CTCAG	7 cut(s)	273, 295, 333, 339, 1267, 1358, 1592
BspDI	ATCGAT	1 cut(s)	1617
BspEI	TCCGGA	1 cut(s)	142
BspFNI	CGCG	1 cut(s)	1323
BspHI	TCATGA	1 cut(s)	1377
BspLI	GGNNCC	1 cut(s)	1008
BspMAI	CTGCAG	2 cut(s)	1333, 1425
BspMI	ACCTGC	1 cut(s)	1183
BspPI	GGATC	8 cut(s)	12, 199, 285, 359, 696, 782, 1119, 1835
BspT104I	TTCGAA	2 cut(s)	480, 1638
BspT107I	GGYRCC	1 cut(s)	1006
BspTI	CTTAAG	1 cut(s)	1738
BsrBI	CCGCTC	1 cut(s)	1852
BsrDI	GCAATG	2 cut(s)	394, 1194
BsrFI	RCCGGY	1 cut(s)	459
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	1 cut(s)	1406
BssAI	RCCGGY	1 cut(s)	459
BssECI	CCNNGG	2 cut(s)	37, 1182
Bst2UI	CCWGG	2 cut(s)	92, 262
Bst4CI	ACNGT	3 cut(s)	1006, 1597, 1671
BstAFI	CTTAAG	1 cut(s)	1738
BstAPI	GCANNNNNTGC	1 cut(s)	1495
BstAUI	TGTACA	1 cut(s)	417
BstBI	TTCGAA	2 cut(s)	480, 1638
BstC8I	GCNNGC	5 cut(s)	317, 491, 812, 1321, 1886
BstDEI	CTNAG	7 cut(s)	281, 303, 320, 326, 1254, 1345, 1579
BstF5I	GGATG	4 cut(s)	129, 708, 1410, 1687
BstFNI	CGCG	1 cut(s)	1323
BstH2I	RGCGCY	4 cut(s)	59, 298, 875, 1143
BstHHI	GCGC	6 cut(s)	58, 168, 297, 565, 874, 1142
BstMAI	GTCTC	5 cut(s)	549, 647, 1183, 1409, 1748
BstMCI	CGRYCG	1 cut(s)	243
BstNI	CCWGG	2 cut(s)	92, 262
BstNSI	RCATGY	1 cut(s)	1250
BstSCI	CCNGG	4 cut(s)	90, 260, 572, 1182
BstSFI	CTRYAG	2 cut(s)	1329, 1421
BstUI	CGCG	1 cut(s)	1323
BstV1I	GCAGC	6 cut(s)	304, 1087, 1186, 1237, 1315, 1468
BstV2I	GAAGAC	1 cut(s)	1341
BstX2I	RGATCY	4 cut(s)	204, 277, 364, 1840
BstYI	RGATCY	4 cut(s)	204, 277, 364, 1840
Bsu15I	ATCGAT	1 cut(s)	1617
BsuRI	GGCC	1 cut(s)	260
BsuTUI	ATCGAT	1 cut(s)	1617
BtgZI	GCGATG	1 cut(s)	1338
BtsCI	GGATG	4 cut(s)	129, 708, 1410, 1687
BtsIMutI	CAGTG	2 cut(s)	1177, 1382
BveI	ACCTGC	1 cut(s)	1183
Cac8I	GCNNGC	5 cut(s)	317, 491, 812, 1321, 1886
CaiI	CAGNNNCTG	1 cut(s)	445
CciI	TCATGA	1 cut(s)	1377
CfoI	GCGC	6 cut(s)	58, 168, 297, 565, 874, 1142
Cfr10I	RCCGGY	1 cut(s)	459
Cfr13I	GGNCC	2 cut(s)	457, 606
ClaI	ATCGAT	1 cut(s)	1617
Csp6I	GTAC	2 cut(s)	418, 826
CspAI	ACCGGT	1 cut(s)	459
CspCI	CAANNNNNGTGG	2 cut(s)	1176, 1211
CviAII	CATG	8 cut(s)	52, 526, 830, 928, 1060, 1216, 1247, 1378
CviQI	GTAC	2 cut(s)	418, 826
DdeI	CTNAG	7 cut(s)	281, 303, 320, 326, 1254, 1345, 1579
EaeI	YGGCCR	1 cut(s)	258
Ecl136II	GAGCTC	1 cut(s)	7
Eco24I	GRGCYC	1 cut(s)	9
Eco32I	GATATC	2 cut(s)	624, 964
Eco47I	GGWCC	2 cut(s)	457, 606
Eco47III	AGCGCT	1 cut(s)	873
Eco53kI	GAGCTC	1 cut(s)	7
Eco57I	CTGAAG	2 cut(s)	479, 1830
Eco88I	CYCGRG	1 cut(s)	36
EcoICRI	GAGCTC	1 cut(s)	7
EcoRII	CCWGG	2 cut(s)	90, 260
EcoRV	GATATC	2 cut(s)	624, 964
EcoT38I	GRGCYC	1 cut(s)	9
Esp3I	CGTCTC	1 cut(s)	1183
FaeI	CATG	8 cut(s)	55, 529, 833, 931, 1063, 1219, 1250, 1381
FalI	AAGNNNNNCTT	2 cut(s)	1518, 1550
FaqI	GGGAC	1 cut(s)	1589
FatI	CATG	8 cut(s)	51, 525, 829, 927, 1059, 1215, 1246, 1377
FauI	CCCGC	1 cut(s)	1328
FbaI	TGATCA	3 cut(s)	729, 892, 1452
FblI	GTMKAC	2 cut(s)	110, 339
Fnu4HI	GCNGC	8 cut(s)	293, 1021, 1076, 1200, 1251, 1329, 1482, 1853
FokI	GGATG	4 cut(s)	136, 715, 1417, 1694
FriOI	GRGCYC	1 cut(s)	9
Fsp4HI	GCNGC	8 cut(s)	293, 1021, 1076, 1200, 1251, 1329, 1482, 1853
FspBI	CTAG	2 cut(s)	699, 1910
FspI	TGCGCA	1 cut(s)	564
GlaI	GCGC	6 cut(s)	57, 167, 296, 564, 873, 1141
GluI	GCNGC	8 cut(s)	293, 1021, 1076, 1200, 1251, 1329, 1482, 1853
GsuI	CTGGAG	1 cut(s)	149
HaeII	RGCGCY	4 cut(s)	59, 298, 875, 1143
HaeIII	GGCC	1 cut(s)	260
HapII	CCGG	7 cut(s)	143, 220, 368, 460, 573, 609, 1184
HhaI	GCGC	6 cut(s)	58, 168, 297, 565, 874, 1142
Hin1II	CATG	8 cut(s)	55, 529, 833, 931, 1063, 1219, 1250, 1381
Hin6I	GCGC	6 cut(s)	56, 166, 295, 563, 872, 1140
HinP1I	GCGC	6 cut(s)	56, 166, 295, 563, 872, 1140
HincII	GTYRAC	1 cut(s)	403
HindII	GTYRAC	1 cut(s)	403
HindIII	AAGCTT	3 cut(s)	249, 491, 1151
HpaII	CCGG	7 cut(s)	143, 220, 368, 460, 573, 609, 1184
HphI	GGTGA	1 cut(s)	184
Hpy166II	GTNNAC	7 cut(s)	70, 111, 340, 403, 1399, 1593, 1624
Hpy188III	TCNNGA	7 cut(s)	15, 36, 143, 539, 1378, 1751, 1910
Hpy8I	GTNNAC	7 cut(s)	70, 111, 340, 403, 1399, 1593, 1624
Hpy99I	CGWCG	2 cut(s)	109, 259
HpyAV	CCTTC	3 cut(s)	172, 389, 1854
HpyCH4III	ACNGT	3 cut(s)	1006, 1597, 1671
HpyCH4V	TGCA	9 cut(s)	706, 989, 1192, 1331, 1423, 1484, 1604, 1649, 1685
HpyF3I	CTNAG	7 cut(s)	281, 303, 320, 326, 1254, 1345, 1579
Hsp92II	CATG	8 cut(s)	55, 529, 833, 931, 1063, 1219, 1250, 1381
HspAI	GCGC	6 cut(s)	56, 166, 295, 563, 872, 1140
Kpn2I	TCCGGA	1 cut(s)	142
Ksp22I	TGATCA	3 cut(s)	729, 892, 1452
LmnI	GCTCC	3 cut(s)	4, 17, 307
Lsp1109I	GCAGC	6 cut(s)	304, 1087, 1186, 1237, 1315, 1468
LweI	GCATC	5 cut(s)	114, 693, 1315, 1623, 1672
MaeI	CTAG	2 cut(s)	699, 1910
MaeIII	GTNAC	2 cut(s)	757, 948
MbiI	CCGCTC	1 cut(s)	1852
MfeI	CAATTG	1 cut(s)	233
MflI	RGATCY	4 cut(s)	204, 277, 364, 1840
MhlI	GDGCHC	1 cut(s)	9
MluCI	AATT	7 cut(s)	223, 233, 629, 692, 1605, 1729, 1832
MlyI	GAGTC	7 cut(s)	403, 436, 523, 551, 1411, 1571, 1923
MmeI	TCCRAC	3 cut(s)	45, 352, 1267
MroI	TCCGGA	1 cut(s)	142
MroXI	GAANNNNTTC	1 cut(s)	182
MseI	TTAA	9 cut(s)	117, 465, 1121, 1356, 1512, 1584, 1728, 1739, 1764
MslI	CAYNNNNRTG	2 cut(s)	932, 1619
MspCI	CTTAAG	1 cut(s)	1738
MspI	CCGG	7 cut(s)	143, 220, 368, 460, 573, 609, 1184
MspR9I	CCNGG	4 cut(s)	92, 262, 574, 1184
MunI	CAATTG	1 cut(s)	233
Mva1269I	GAATGC	1 cut(s)	1266
MvaI	CCWGG	2 cut(s)	92, 262
MvnI	CGCG	1 cut(s)	1323
NciI	CCSGG	2 cut(s)	574, 1184
NlaIII	CATG	8 cut(s)	55, 529, 833, 931, 1063, 1219, 1250, 1381
NlaIV	GGNNCC	1 cut(s)	1008
NmuCI	GTSAC	1 cut(s)	757
NsbI	TGCGCA	1 cut(s)	564
NspI	RCATGY	1 cut(s)	1250
NspV	TTCGAA	2 cut(s)	480, 1638
PagI	TCATGA	1 cut(s)	1377
PaqCI	CACCTGC	1 cut(s)	1183
PctI	GAATGC	1 cut(s)	1266
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	7 cut(s)	139, 148, 285, 643, 1046, 1640, 1712
PflMI	CCANNNNNTGG	1 cut(s)	445
PfoI	TCCNGGA	1 cut(s)	90
PinAI	ACCGGT	1 cut(s)	459
PkrI	GCNGC	8 cut(s)	294, 1022, 1077, 1201, 1252, 1330, 1483, 1854
Ple19I	CGATCG	1 cut(s)	243
PleI	GAGTC	7 cut(s)	403, 436, 523, 550, 1411, 1571, 1923
PpsI	GAGTC	7 cut(s)	403, 436, 523, 550, 1411, 1571, 1923
PsiI	TTATAA	1 cut(s)	1791
Psp124BI	GAGCTC	1 cut(s)	9
Psp6I	CCWGG	2 cut(s)	90, 260
PspGI	CCWGG	2 cut(s)	90, 260
PspN4I	GGNNCC	1 cut(s)	1008
PspPI	GGNCC	2 cut(s)	457, 606
PsrI	GAACNNNNNNTAC	2 cut(s)	658, 690
PstI	CTGCAG	2 cut(s)	1333, 1425
PstNI	CAGNNNCTG	1 cut(s)	445
PsuI	RGATCY	4 cut(s)	204, 277, 364, 1840
PvuI	CGATCG	1 cut(s)	243
RsaI	GTAC	2 cut(s)	419, 827
RsaNI	GTAC	2 cut(s)	418, 826
RseI	CAYNNNNRTG	2 cut(s)	932, 1619
SacI	GAGCTC	1 cut(s)	9
SaqAI	TTAA	9 cut(s)	117, 465, 1121, 1356, 1512, 1584, 1728, 1739, 1764
SatI	GCNGC	8 cut(s)	293, 1021, 1076, 1200, 1251, 1329, 1482, 1853
Sau96I	GGNCC	2 cut(s)	457, 606
SchI	GAGTC	7 cut(s)	403, 436, 523, 551, 1411, 1571, 1923
ScrFI	CCNGG	4 cut(s)	92, 262, 574, 1184
SduI	GDGCHC	1 cut(s)	9
SfaNI	GCATC	5 cut(s)	114, 693, 1315, 1623, 1672
SfcI	CTRYAG	2 cut(s)	1329, 1421
SfuI	TTCGAA	2 cut(s)	480, 1638
SinI	GGWCC	2 cut(s)	457, 606
SmiMI	CAYNNNNRTG	2 cut(s)	932, 1619
SmlI	CTYRAG	4 cut(s)	59, 539, 1738, 1931
SmoI	CTYRAG	4 cut(s)	59, 539, 1738, 1931
Sse9I	AATT	7 cut(s)	223, 233, 629, 692, 1605, 1729, 1832
SsiI	CCGC	8 cut(s)	121, 766, 881, 1021, 1030, 1307, 1321, 1852
SspMI	CTAG	2 cut(s)	699, 1910
SstI	GAGCTC	1 cut(s)	9
StyD4I	CCNGG	4 cut(s)	90, 260, 572, 1182
TaaI	ACNGT	3 cut(s)	1006, 1597, 1671
TaqI	TCGA	6 cut(s)	78, 162, 480, 626, 1617, 1638
TaqII	GACCGA	1 cut(s)	233
TasI	AATT	7 cut(s)	223, 233, 629, 692, 1605, 1729, 1832
TatI	WGTACW	1 cut(s)	417
TauI	GCSGC	2 cut(s)	1023, 1855
TfiI	GAWTC	7 cut(s)	139, 148, 285, 643, 1046, 1640, 1712
Tru1I	TTAA	9 cut(s)	117, 465, 1121, 1356, 1512, 1584, 1728, 1739, 1764
Tru9I	TTAA	9 cut(s)	117, 465, 1121, 1356, 1512, 1584, 1728, 1739, 1764
TscAI	CASTG	2 cut(s)	1177, 1389
TseFI	GTSAC	1 cut(s)	757
TseI	GCWGC	6 cut(s)	292, 1075, 1199, 1250, 1328, 1481
Tsp45I	GTSAC	1 cut(s)	757
TspDTI	ATGAA	5 cut(s)	191, 920, 944, 1048, 1366
TspGWI	ACGGA	2 cut(s)	522, 881
TspRI	CASTG	2 cut(s)	1177, 1389
Van91I	CCANNNNNTGG	1 cut(s)	445
Vha464I	CTTAAG	1 cut(s)	1738
VpaK11BI	GGWCC	2 cut(s)	457, 606
XapI	RAATTY	1 cut(s)	223
XbaI	TCTAGA	1 cut(s)	1909
XceI	RCATGY	1 cut(s)	1250
XmiI	GTMKAC	2 cut(s)	110, 339
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	2 cut(s)	699, 1910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.