Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003685.1

Orthogroup ID

OG0003433

Physical Location & Seq

Genomic Coordinates Reverse (-)

21350 .. 33436

Gene Structure 12087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003685.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

atgagtgagcatcatcaagtagccggcgacacaaagtgtcctactcactcccaagactacgctccttaccctaagctcgatccaaacgacgtcgctccacctcccctaggctcgggcgccgccgatcgtcgtagacaacaccgcaccaccatgccgctggagtccaacccttacgtcaccaatccggctccacctccttctttgtccgtcaagagtttggtcgtgctcaagaacatgagatggtccgccatggttttgggcactgccaattccctggtgctcattgtgggtatctattttctggtcttggctttcccttcttgtgatcgcggcctcctcgtaatgcttgtggctgttcctttcttggctgctctccgcattgccaccatggtcaagactggttcagcccaacaagccactgccaagaccgttcttgaggaatctccagctgatacccttggtgttctagaagatgcttctcgacccgaaaccaggggtggagctgaaaatgatgaaactatttgtattttcgacacctgtttacttgatgttatgcaaatgattcggctcttggtgaggtacaagaattggctttggtggactcgatttgcaactgttattacagtactgcaatttgttggtgcatcttacctgctgttcagtatggtcaactacgtgatctactctcaaaacaaagcatcaagttattgtgttttggtggcaacttcaagcaatattttgtggaagcaacaactactcatcttttttgtgatcacggtgtgtttggctgcactactacaatgtttgactggatctaatgttttaaaatggagatccttttatgcaacacaagatgatgcatggaaagctcattacagggaggtatttgatcatggtattcgcgaggccttgtgctgtatgggacgagtcaaatacttgagtgtattggaagaagatgaggttttctcagtagctcgactgctgggtgaccttgttgcctatcgtgcagcaggcacaggacatctgaaacttatggcaggtctcgcactattgcggaaccagagccattcaccaaaatcctttgacgagtgcatggagacacctgaagaaaagatcagggaggctgcagatcttcataagtttgcagaagctgcctacacgggtccattacttgattttggaagacaccctttcttatttccttgtgcttggctttataggcaagggattttgaccccatggactcgtaacaggctacccaaacttgatggtgataattggtggcgaggtcatgcagcggcgtttctaaaatatgtaaagttatccccagaggtacttagacaagggcgtgttaaccaggcgaagtgtagagctgcatactttgttatagtgctgcatcatctaagatccgtggtgattgctgttcggggaactgagaccccagaagatctaatcactgacagcttatgtagggaatgtcgtctttctgcagaagacttggatggattgataaatagctgtcttcttcaacgcgatgtaaaagagagcttgatgtctttccctcaccacgcacactctggtatagttgaggctgcaagagatctttttatgcaaattgaaggctctgactcaagtggccttctttcttctttattgggagctggatgtgagtgtgagggatatagcattcgcatagtggggcattccctaggaggtgcaattggtgcattgctaggacttagactgtatcaccgatacccaaatttgcatgtctatacatatggcccccttccatgtgtggactcagttgtagcaaatgcatgttctgaatttattacaagcattgtatacaacaatgaattttcagcacgcctttctgttggatctctcctgcggcttcaaggtgctgcaattacggcaatgtcaaaagatgcagaagccgattcagctatgatattaaggcttgcacgtcattttcttaatgtaagcaaacatcagaaagataggactcaggtaaaggatccagcttcagatgccatttctggggcaatcactgccgagaagcttagccaccaaatctgcggacctcagtttgatataaaaggctctgactcaagtggccttctttcttctttattgggagctggatgtgagtgtgagggatatagcattcgcatagtggggcattccctaggaggtgcaattggtgcattgctaggacttagactgtatcaccgatacccaaatttgcatgtctatacatatggcccccttccatgtgtggactcagttgtagcaaatgcatgttctgaatttattacaagcattgtatacaacaatgaattttcagcacgcctttctgttggatctctcctgcggcttcaaggtgctgcaattacggcaatgtcaaaagatgcagaagccgattcagctatgatattaaggcttgcacgtcattttcttaatgtaagcaaacatcagaaagataggactcaggtaaaggatccagcttcagatgccatttctggggcaatcactgccgagaagcttagccaccaaatatgcggacctcagtttgatataaaagcaagtgaggaacaagatgagggtttccttgcgtgcaaggatgctcgcacaggtgaaacagattttggagctgataacgatcaatttactaaccctttcgccagtgatgccattgcaaatcatgatcctgtgtctgagtttatggaaagtgtccccagatctgatagtgtgtcacctaccgatccccctgagatgtatctgccaggccttgtaattcatatagtagcacagccaaggaacttcgatatgcctatttggaaaggcttgggagtccacgagaagacacaatctcacaaagcttatattgcagacagagaaagcttcaaagatatgattgtgtcaccatcaatgtttctcgaccatcttccttggagatgtcacgatgcaatgctaaaattattgcaagcttggagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0001676 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0007275 GO:0007399 GO:0007405 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009987 GO:0016020 GO:0019369 GO:0019752 GO:0022008 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0033559 GO:0042133 GO:0042136 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044464 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0061351 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072089 GO:1901568

KEGG Pathways

Metabolic & Signaling

ko04723 ko04745 ko04925 map04723 map04745 map04925

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

1000

Amino Acids

110.19

Weight (kDa)

6.34

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05790 AT1G05790 AT1G05790 AT1G05790
fragaria_vesca	FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690
malus_domestica	MD04G1032500.v1.1 MD04G1032600.v1.1
prunus_persica	Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1
pyrus_communis	pycom04g02680 pycom04g02690
rosa_chinensis	RchiOBHm_Chr4g0408981
rosa_laevigata	RLG00000008601
rosa_multiflora	Rmu_sc0003685.1_g000003 Rmu_sc0031886.1_g000002
rosa_roxburghii	Rroxscaffold_5G00353410
rosa_rugosa	Rorug04G0088900 Rorug04G0088900
rosa_samantha	Rh4AG153000 Rh4BG150900 Rh4CG161400 Rh4DG146400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	93
Acc36I	ACCTGC	2 cut(s)	660, 1028
AccB1I	GGYRCC	1 cut(s)	116
AccI	GTMKAC	3 cut(s)	133, 1848, 2331
AccII	CGCG	3 cut(s)	330, 903, 1533
AcsI	RAATTY	6 cut(s)	1762, 1829, 1859, 2245, 2312, 2342
AcuI	CTGAAG	3 cut(s)	1125, 2013, 2496
AcyI	GRCGYC	2 cut(s)	90, 117
AdeI	CACNNNGTG	2 cut(s)	36, 780
AfaI	GTAC	3 cut(s)	581, 627, 1335
AfiI	CCNNNNNNNGG	5 cut(s)	107, 112, 492, 2043, 2526
AgsI	TTSAA	6 cut(s)	729, 1529, 1619, 1901, 2384, 2911
AjiI	CACGTC	2 cut(s)	1970, 2453
AjnI	CCWGG	4 cut(s)	273, 491, 1356, 2788
AjuI	GAANNNNNNNTTGG	2 cut(s)	2634, 2666
Alw21I	GWGCWC	2 cut(s)	228, 282
Alw26I	GTCTC	3 cut(s)	1046, 1091, 1430
AlwNI	CAGNNNCTG	1 cut(s)	1151
Ama87I	CYCGRG	1 cut(s)	112
AoxI	GGCC	7 cut(s)	331, 906, 1636, 1783, 2119, 2266, 2791
ApoI	RAATTY	6 cut(s)	1762, 1829, 1859, 2245, 2312, 2342
AspA2I	CCTAGG	3 cut(s)	106, 1708, 2191
AspLEI	GCGC	1 cut(s)	119
AspS9I	GGNCC	6 cut(s)	243, 1163, 1784, 2084, 2267, 2567
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	4 cut(s)	243, 1163, 2084, 2567
AvrII	CCTAGG	3 cut(s)	106, 1708, 2191
BaeGI	GKGCMC	1 cut(s)	263
BamHI	GGATCC	2 cut(s)	2020, 2503
BanI	GGYRCC	1 cut(s)	116
BauI	CACGAG	1 cut(s)	2861
BbsI	GAAGAC	4 cut(s)	1189, 1500, 1514, 2873
Bbv12I	GWGCWC	2 cut(s)	228, 282
BccI	CCATC	5 cut(s)	234, 1262, 1496, 2938, 2955
BceAI	ACGGC	2 cut(s)	1932, 2415
BcgI	CGANNNNNNTGC	2 cut(s)	545, 579
BciT130I	CCWGG	4 cut(s)	275, 493, 1358, 2790
BclI	TGATCA	2 cut(s)	771, 889
BcoDI	GTCTC	3 cut(s)	1046, 1091, 1430
BfaI	CTAG	7 cut(s)	107, 467, 1709, 1733, 2192, 2216, 3001
BfmI	CTRYAG	2 cut(s)	1125, 1488
BfoI	RGCGCY	1 cut(s)	120
BfuAI	ACCTGC	2 cut(s)	660, 1028
BglII	AGATCT	4 cut(s)	1129, 1447, 1600, 2744
BlnI	CCTAGG	3 cut(s)	106, 1708, 2191
BlpI	GCTNAGC	2 cut(s)	2066, 2549
BmcAI	AGTACT	1 cut(s)	627
Bme1390I	CCNGG	4 cut(s)	275, 493, 1358, 2790
Bme18I	GGWCC	4 cut(s)	243, 1163, 2084, 2567
BmeT110I	CYCGRG	1 cut(s)	112
BmgBI	CACGTC	2 cut(s)	1970, 2453
BmgT120I	GGNCC	6 cut(s)	243, 1163, 1784, 2084, 2267, 2567
BmiI	GGNNCC	8 cut(s)	118, 189, 1058, 1164, 1786, 2022, 2269, 2505
BmrFI	CCNGG	4 cut(s)	275, 493, 1358, 2790
BpiI	GAAGAC	4 cut(s)	1189, 1500, 1514, 2873
BplI	GAGNNNNNCTC	2 cut(s)	950, 982
BpmI	CTGGAG	2 cut(s)	179, 429
Bpu10I	CCTNAGC	1 cut(s)	72
Bpu1102I	GCTNAGC	2 cut(s)	2066, 2549
BpuEI	CTTGAG	5 cut(s)	212, 455, 958, 1615, 2098
BsaAI	YACGTR	1 cut(s)	676
BsaBI	GATNNNNATC	1 cut(s)	2664
BsaHI	GRCGYC	2 cut(s)	90, 117
BsaI	GGTCTC	2 cut(s)	1046, 1430
Bsc4I	CCNNNNNNNGG	5 cut(s)	107, 112, 492, 2043, 2526
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	3 cut(s)	403, 814, 2688
Bse3DI	GCAATG	7 cut(s)	378, 1727, 1926, 2210, 2409, 2697, 2979
Bse8I	GATNNNNATC	1 cut(s)	2664
BseBI	CCWGG	4 cut(s)	275, 493, 1358, 2790
BseGI	GGATG	4 cut(s)	1507, 1670, 2153, 2632
BseJI	GATNNNNATC	1 cut(s)	2664
BseLI	CCNNNNNNNGG	5 cut(s)	107, 112, 492, 2043, 2526
BseMI	GCAATG	7 cut(s)	378, 1727, 1926, 2210, 2409, 2697, 2979
BseNI	ACTGG	3 cut(s)	403, 814, 2688
BseRI	GAGGAG	1 cut(s)	326
BseSI	GKGCMC	1 cut(s)	263
BseYI	CCCAGC	1 cut(s)	982
BsgI	GTGCAG	2 cut(s)	774, 1026
Bsh1236I	CGCG	3 cut(s)	330, 903, 1533
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	7 cut(s)	333, 908, 1638, 1785, 2121, 2268, 2793
BshNI	GGYRCC	1 cut(s)	116
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	228, 282
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	2 cut(s)	24, 185
BslFI	GGGAC	2 cut(s)	936, 2723
BslI	CCNNNNNNNGG	5 cut(s)	107, 112, 492, 2043, 2526
BsmAI	GTCTC	3 cut(s)	1046, 1091, 1430
BsmFI	GGGAC	2 cut(s)	936, 2723
BsmI	GAATGC	4 cut(s)	1686, 1702, 2169, 2185
BsnI	GGCC	7 cut(s)	333, 908, 1638, 1785, 2121, 2268, 2793
Bso31I	GGTCTC	2 cut(s)	1046, 1430
BsoBI	CYCGRG	1 cut(s)	112
Bsp1286I	GDGCHC	3 cut(s)	228, 263, 282
Bsp1720I	GCTNAGC	2 cut(s)	2066, 2549
Bsp19I	CCATGG	3 cut(s)	249, 387, 1238
Bsp68I	TCGCGA	1 cut(s)	903
BspANI	GGCC	7 cut(s)	333, 908, 1638, 1785, 2121, 2268, 2793
BspFNI	CGCG	3 cut(s)	330, 903, 1533
BspHI	TCATGA	1 cut(s)	2707
BspLI	GGNNCC	8 cut(s)	118, 189, 1058, 1164, 1786, 2022, 2269, 2505
BspMAI	CTGCAG	2 cut(s)	1129, 1492
BspMI	ACCTGC	2 cut(s)	660, 1028
BspT107I	GGYRCC	1 cut(s)	116
BspTNI	GGTCTC	2 cut(s)	1046, 1430
BsrDI	GCAATG	7 cut(s)	378, 1727, 1926, 2210, 2409, 2697, 2979
BsrFI	RCCGGY	1 cut(s)	23
BsrI	ACTGG	3 cut(s)	403, 814, 2688
BssAI	RCCGGY	1 cut(s)	23
BssNAI	GTATAC	2 cut(s)	1849, 2332
BssNI	GRCGYC	2 cut(s)	90, 117
BssSI	CACGAG	1 cut(s)	2861
BssT1I	CCWWGG	9 cut(s)	106, 249, 387, 457, 1238, 1708, 2191, 2819, 2954
Bst1107I	GTATAC	2 cut(s)	1849, 2332
Bst2BI	CACGAG	1 cut(s)	2861
Bst2UI	CCWGG	4 cut(s)	275, 493, 1358, 2790
Bst4CI	ACNGT	6 cut(s)	430, 616, 625, 778, 1746, 2229
BstACI	GRCGYC	2 cut(s)	90, 117
BstAPI	GCANNNNNTGC	5 cut(s)	1151, 1724, 2054, 2207, 2537
BstBAI	YACGTR	1 cut(s)	676
BstC8I	GCNNGC	9 cut(s)	25, 1012, 1870, 1965, 2353, 2448, 2620, 2632, 2991
BstDSI	CCRYGG	4 cut(s)	249, 387, 1238, 1410
BstEII	GGTNACC	1 cut(s)	986
BstENI	CCTNNNNNAGG	1 cut(s)	105
BstF5I	GGATG	4 cut(s)	1507, 1670, 2153, 2632
BstFNI	CGCG	3 cut(s)	330, 903, 1533
BstH2I	RGCGCY	1 cut(s)	120
BstHHI	GCGC	1 cut(s)	119
BstMAI	GTCTC	3 cut(s)	1046, 1091, 1430
BstMCI	CGRYCG	1 cut(s)	127
BstNI	CCWGG	4 cut(s)	275, 493, 1358, 2790
BstNSI	RCATGY	4 cut(s)	1772, 1824, 2255, 2307
BstPI	GGTNACC	1 cut(s)	986
BstSCI	CCNGG	4 cut(s)	273, 491, 1356, 2788
BstSFI	CTRYAG	2 cut(s)	1125, 1488
BstSLI	GKGCMC	1 cut(s)	263
BstUI	CGCG	3 cut(s)	330, 903, 1533
BstV2I	GAAGAC	4 cut(s)	1189, 1500, 1514, 2873
BstXI	CCANNNNNNTGG	3 cut(s)	157, 256, 274
BstZ17I	GTATAC	2 cut(s)	1849, 2332
BsuRI	GGCC	7 cut(s)	333, 908, 1638, 1785, 2121, 2268, 2793
BtgI	CCRYGG	4 cut(s)	249, 387, 1238, 1410
BtgZI	GCGATG	1 cut(s)	1548
BtrI	CACGTC	2 cut(s)	1970, 2453
BtsCI	GGATG	4 cut(s)	1507, 1670, 2153, 2632
BtsI	GCAGTG	4 cut(s)	261, 417, 2052, 2535
BtsIMutI	CAGTG	6 cut(s)	261, 417, 1455, 2052, 2535, 2695
BtuMI	TCGCGA	1 cut(s)	903
BveI	ACCTGC	2 cut(s)	660, 1028
Cac8I	GCNNGC	9 cut(s)	25, 1012, 1870, 1965, 2353, 2448, 2620, 2632, 2991
CaiI	CAGNNNCTG	1 cut(s)	1151
CciI	TCATGA	1 cut(s)	2707
CfoI	GCGC	1 cut(s)	119
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	6 cut(s)	243, 1163, 1784, 2084, 2267, 2567
Csp6I	GTAC	3 cut(s)	580, 626, 1334
CviQI	GTAC	3 cut(s)	580, 626, 1334
DinI	GGCGCC	1 cut(s)	118
DraI	TTTAAA	1 cut(s)	825
DraIII	CACNNNGTG	2 cut(s)	36, 780
EciI	GGCGGA	1 cut(s)	235
Eco130I	CCWWGG	9 cut(s)	106, 249, 387, 457, 1238, 1708, 2191, 2819, 2954
Eco147I	AGGCCT	2 cut(s)	908, 2793
Eco31I	GGTCTC	2 cut(s)	1046, 1430
Eco47I	GGWCC	4 cut(s)	243, 1163, 2084, 2567
Eco57I	CTGAAG	3 cut(s)	1125, 2013, 2496
Eco88I	CYCGRG	1 cut(s)	112
Eco91I	GGTNACC	1 cut(s)	986
EcoNI	CCTNNNNNAGG	1 cut(s)	105
EcoO65I	GGTNACC	1 cut(s)	986
EcoRII	CCWGG	4 cut(s)	273, 491, 1356, 2788
EcoT14I	CCWWGG	9 cut(s)	106, 249, 387, 457, 1238, 1708, 2191, 2819, 2954
EcoT22I	ATGCAT	3 cut(s)	862, 1822, 2305
EgeI	GGCGCC	1 cut(s)	118
EheI	GGCGCC	1 cut(s)	118
ErhI	CCWWGG	9 cut(s)	106, 249, 387, 457, 1238, 1708, 2191, 2819, 2954
FalI	AAGNNNNNCTT	2 cut(s)	1174, 1206
FaqI	GGGAC	2 cut(s)	936, 2723
FauNDI	CATATG	2 cut(s)	1780, 2263
FbaI	TGATCA	2 cut(s)	771, 889
FblI	GTMKAC	3 cut(s)	133, 1848, 2331
FokI	GGATG	4 cut(s)	1514, 1677, 2160, 2639
FspBI	CTAG	7 cut(s)	107, 467, 1709, 1733, 2192, 2216, 3001
GlaI	GCGC	1 cut(s)	118
GsaI	CCCAGC	1 cut(s)	986
GsuI	CTGGAG	2 cut(s)	179, 429
HaeII	RGCGCY	1 cut(s)	120
HaeIII	GGCC	7 cut(s)	333, 908, 1638, 1785, 2121, 2268, 2793
HapII	CCGG	2 cut(s)	24, 185
HhaI	GCGC	1 cut(s)	119
Hin1I	GRCGYC	2 cut(s)	90, 117
Hin6I	GCGC	1 cut(s)	117
HinP1I	GCGC	1 cut(s)	117
HincII	GTYRAC	2 cut(s)	670, 1354
HindII	GTYRAC	2 cut(s)	670, 1354
HindIII	AAGCTT	5 cut(s)	2063, 2546, 2883, 2905, 2991
HpaI	GTTAAC	1 cut(s)	1354
HpaII	CCGG	2 cut(s)	24, 185
Hpy99I	CGWCG	3 cut(s)	92, 95, 132
HpyAV	CCTTC	7 cut(s)	207, 327, 1613, 1649, 1799, 2132, 2282
HpyCH4III	ACNGT	6 cut(s)	430, 616, 625, 778, 1746, 2229
HpyCH4IV	ACGT	5 cut(s)	90, 174, 675, 1969, 2452
HpySE526I	ACGT	5 cut(s)	90, 174, 675, 1969, 2452
Hsp92I	GRCGYC	2 cut(s)	90, 117
HspAI	GCGC	1 cut(s)	117
KasI	GGCGCC	1 cut(s)	116
KroI	GCCGGC	1 cut(s)	23
KroNI	GCCGGC	1 cut(s)	25
Ksp22I	TGATCA	2 cut(s)	771, 889
KspAI	GTTAAC	1 cut(s)	1354
LmnI	GCTCC	8 cut(s)	67, 100, 193, 500, 1658, 2141, 2654, 2997
MaeI	CTAG	7 cut(s)	107, 467, 1709, 1733, 2192, 2216, 3001
MaeII	ACGT	5 cut(s)	90, 174, 675, 1969, 2452
MaeIII	GTNAC	6 cut(s)	175, 986, 1247, 2757, 2925, 2963
MfeI	CAATTG	2 cut(s)	1719, 2202
MhlI	GDGCHC	3 cut(s)	228, 263, 282
Mly113I	GGCGCC	1 cut(s)	117
MmeI	TCCRAC	3 cut(s)	189, 1861, 2344
Mph1103I	ATGCAT	3 cut(s)	862, 1822, 2305
MroNI	GCCGGC	1 cut(s)	23
MseI	TTAA	6 cut(s)	824, 1353, 1958, 1980, 2441, 2463
MslI	CAYNNNNRTG	1 cut(s)	149
MspA1I	CMGCKG	3 cut(s)	157, 449, 1298
MspI	CCGG	2 cut(s)	24, 185
MspR9I	CCNGG	4 cut(s)	275, 493, 1358, 2790
MunI	CAATTG	2 cut(s)	1719, 2202
Mva1269I	GAATGC	4 cut(s)	1686, 1702, 2169, 2185
MvaI	CCWGG	4 cut(s)	275, 493, 1358, 2790
MvnI	CGCG	3 cut(s)	330, 903, 1533
NaeI	GCCGGC	1 cut(s)	25
NarI	GGCGCC	1 cut(s)	117
NcoI	CCATGG	3 cut(s)	249, 387, 1238
NdeI	CATATG	2 cut(s)	1780, 2263
NgoMIV	GCCGGC	1 cut(s)	23
NlaIV	GGNNCC	8 cut(s)	118, 189, 1058, 1164, 1786, 2022, 2269, 2505
NmeAIII	GCCGAG	2 cut(s)	2083, 2566
NmuCI	GTSAC	5 cut(s)	175, 986, 2757, 2925, 2963
NruI	TCGCGA	1 cut(s)	903
NsiI	ATGCAT	3 cut(s)	862, 1822, 2305
NspI	RCATGY	4 cut(s)	1772, 1824, 2255, 2307
PagI	TCATGA	1 cut(s)	2707
PceI	AGGCCT	2 cut(s)	908, 2793
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PctI	GAATGC	4 cut(s)	1686, 1702, 2169, 2185
PdiI	GCCGGC	1 cut(s)	25
PfeI	GAWTC	4 cut(s)	440, 562, 1943, 2426
Ple19I	CGATCG	1 cut(s)	127
PluTI	GGCGCC	1 cut(s)	120
Ppu21I	YACGTR	1 cut(s)	676
Psp6I	CCWGG	4 cut(s)	273, 491, 1356, 2788
PspEI	GGTNACC	1 cut(s)	986
PspFI	CCCAGC	1 cut(s)	982
PspGI	CCWGG	4 cut(s)	273, 491, 1356, 2788
PspN4I	GGNNCC	8 cut(s)	118, 189, 1058, 1164, 1786, 2022, 2269, 2505
PspPI	GGNCC	6 cut(s)	243, 1163, 1784, 2084, 2267, 2567
PstI	CTGCAG	2 cut(s)	1129, 1492
PstNI	CAGNNNCTG	1 cut(s)	1151
PvuI	CGATCG	1 cut(s)	127
PvuII	CAGCTG	1 cut(s)	449
RruI	TCGCGA	1 cut(s)	903
RsaI	GTAC	3 cut(s)	581, 627, 1335
RsaNI	GTAC	3 cut(s)	580, 626, 1334
RseI	CAYNNNNRTG	1 cut(s)	149
SaqAI	TTAA	6 cut(s)	824, 1353, 1958, 1980, 2441, 2463
Sau96I	GGNCC	6 cut(s)	243, 1163, 1784, 2084, 2267, 2567
ScaI	AGTACT	1 cut(s)	627
ScrFI	CCNGG	4 cut(s)	275, 493, 1358, 2790
SduI	GDGCHC	3 cut(s)	228, 263, 282
SfcI	CTRYAG	2 cut(s)	1125, 1488
SfoI	GGCGCC	1 cut(s)	118
SinI	GGWCC	4 cut(s)	243, 1163, 2084, 2567
SmiMI	CAYNNNNRTG	1 cut(s)	149
SmlI	CTYRAG	5 cut(s)	227, 434, 937, 1630, 2113
SmoI	CTYRAG	5 cut(s)	227, 434, 937, 1630, 2113
SseBI	AGGCCT	2 cut(s)	908, 2793
SspDI	GGCGCC	1 cut(s)	116
SspI	AATATT	1 cut(s)	736
SspMI	CTAG	7 cut(s)	107, 467, 1709, 1733, 2192, 2216, 3001
StuI	AGGCCT	2 cut(s)	908, 2793
StyD4I	CCNGG	4 cut(s)	273, 491, 1356, 2788
StyI	CCWWGG	9 cut(s)	106, 249, 387, 457, 1238, 1708, 2191, 2819, 2954
TaaI	ACNGT	6 cut(s)	430, 616, 625, 778, 1746, 2229
TaiI	ACGT	5 cut(s)	93, 177, 678, 1972, 2455
TaqI	TCGA	7 cut(s)	78, 481, 531, 604, 976, 2829, 2943
TatI	WGTACW	1 cut(s)	625
TauI	GCSGC	6 cut(s)	122, 157, 333, 1301, 1897, 2380
TfiI	GAWTC	4 cut(s)	440, 562, 1943, 2426
Tru1I	TTAA	6 cut(s)	824, 1353, 1958, 1980, 2441, 2463
Tru9I	TTAA	6 cut(s)	824, 1353, 1958, 1980, 2441, 2463
TscAI	CASTG	6 cut(s)	268, 424, 1462, 2059, 2542, 2695
TseFI	GTSAC	5 cut(s)	175, 986, 2757, 2925, 2963
Tsp45I	GTSAC	5 cut(s)	175, 986, 2757, 2925, 2963
TspDTI	ATGAA	5 cut(s)	528, 1124, 1872, 2355, 2792
TspGWI	ACGGA	2 cut(s)	196, 1399
TspRI	CASTG	6 cut(s)	268, 424, 1462, 2059, 2542, 2695
VpaK11BI	GGWCC	4 cut(s)	243, 1163, 2084, 2567
XagI	CCTNNNNNAGG	1 cut(s)	105
XapI	RAATTY	6 cut(s)	1762, 1829, 1859, 2245, 2312, 2342
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	4 cut(s)	1772, 1824, 2255, 2307
XcmI	CCANNNNNNNNNTGG	2 cut(s)	154, 1574
XmaJI	CCTAGG	3 cut(s)	106, 1708, 2191
XmiI	GTMKAC	3 cut(s)	133, 1848, 2331
XspI	CTAG	7 cut(s)	107, 467, 1709, 1733, 2192, 2216, 3001
ZraI	GACGTC	1 cut(s)	91
ZrmI	AGTACT	1 cut(s)	627
Zsp2I	ATGCAT	3 cut(s)	862, 1822, 2305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.