Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0003433

Physical Location & Seq

Genomic Coordinates Forward (+)

31160235 .. 31170225

Gene Structure 9991 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00353410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGTGGGTCTCAAAGCTCAAGAACATGAGATGGTCCGCCATGGTTTTGGGCACTGCCAATTCCCTGGTGCTCATTGTGGGTATCTATTTTCTGGTCTTGGCTTTCCCTTCTTGTGATCGCGGCCTCCTCATAATGCTTGTGACTGTTCCTTTCTTGGCTGCTCTCCGCATTGCCACCATGGTCAAGACTGGTTTAGCCCAACATGCCACTGCCAAGACCGTTCTTGAGGAATCTCCAGCTGATACCCTTGATGTTCTAGAAGATGCTTCTCGACCCGAAACCAGGGGTGGAGCTGAAAATGATGAAACTATTTGTATTTTCGATACCTGTTTACTTGATGTTATGCAAATGATTAGGCCCTTGGTTAGGGAGACACCAACAGGGGGAAGAAGCAAACATGGAGCAGAGATGGAACTATTTAAAAAGTCCCATAGACAGTTTGGATACACTTTCAACCTTCTTTTGATCATAGTTATGTGCAATGTTATCAACAACCTTTTTGGGAGGAGTGTATTGGAAGAAGATGAGGTTTTCTCAGTAGCTCGACTGCTGGGTGACCTTGTTGCCTATCGTGCAGCAGGCACAGGACATCTGAAACTTATGGCAGGTCTCGCACTATTGCGGAACCAGAGCCAGTCACCAAAATCCTTTGACGAGTGCATGGAGACACCTGAAGAAAAGATCAGGGAGGCTGCAGATCTTCATAAGTTTGCAGAAGCTGCCTACACGGGTCCATTACTTGATTTTGGAAGACACCCTTTCTTATTTCCTTGTGCTTGGCTTTATAGGCAAGGGATTTTGACCCCATGGACTCGTAACAGGCTACCCAAACTTGATGGTGATAATTGGTGGCGAGGTCATGCAGCGGCGTTTCTAAAATATGTTAAGTTATCCCCAGAGGTACTTAGACAAGGGCGTGTTAACCAGGCGAAGTGTAGAGCTGCATACTTTGTTATAGTGCTGCATCATCTAAGATCCGTGGTGATTGCTGTTCGGGGAACTGAGACCCCAGAAGATCTAATTACCGACAGCTTATGTAGGGAATGTCGTCTTTCTGCAGAAGACTTGGATGGATTGATAAATAGCTGTCTTCTTCAACGCGATGTAAAAGAGAGCTTGATGTCTTTCCCTCACCATGCACACTCTGGTATAGTTGAGGCTGCAAGAGATCTTTTTATACAAATTGAAGTTGTGGCACTTCGTAATGTTGATGTTGTTGCAGGCTCTGACTCAAGTGGCCTTCTTTCTTCTTTATTGGGAGCTGGATGTGAGTGTGAGGGATATAGCATTCGCATAGTGGGGCATTCCCTAGGAGGTGCGATTGGTGCTTTGCTAGGACTCAGACTGTATCACCGATACCCAAATTTGCATGTCTATACATATGGCCCCCTTCCATGTGTGGACTCAGTTGTAGCAAATGCATGTTCTGAATTTATTACAAGCATTGTATACAACAATGAATTTTCAGCACGCCTTTCTGTTGGATCTCTCCTGCGCCTTCAAGGTGCTGCAATTACGGCAATGTCAAAAGATTCAGAAGCCGATTCAGCTATGATATTAAGGCTTGCACGTCATTTTCTTAATGTAAGCAAACATCAGAAAGATAGGACTCAGGTAAAGGATCCAGGTTCAGATGCCATTTCTGGGGCAATCACTGCCAAGAAGATTAGCCACCAAATCTGCGGACCTCAGTTTGATATAAAAGCGAGCGAGGAACAAGATGAGGGTTTCCTTGCGTGCACAGGTGAAACAGATTTTGGAGCTGATAGCGATCAATTTACTAACCCTTTCGCCAGTGATGCCATTGCAAATCATGATCCTGTGTCTGAGTTTATGGAAAGTGTCCCCAGATCTGATAGTGTGTCACCTACCGATCCCCCTGAGATGTATCTGCCAGGCCTTGTAATTCATATAGTAGCAGAGCCAAGGAACTTCAACATGCCTATTTGGAAAGGCTGGGGAGTCCACGAGAAGACACAATCTCACAAAGCTTATATTGCAGACAGAGAAAGTTTCAAAGATATGATTGTGTCACCATCAATGTTTCTCGACCATCTTCCTTGGAGATGTCACGATGCAATGCTAAAATTATTGCAAGCTCGGAGCTCCCTTCGAAATACCAAGGTTCTTCCTAGTGAATCCCCAATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0001676 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0007275 GO:0007399 GO:0007405 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009987 GO:0016020 GO:0019369 GO:0019752 GO:0022008 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0033559 GO:0042133 GO:0042136 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044464 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0061351 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072089 GO:1901568

KEGG Pathways

Metabolic & Signaling

ko04723 ko04745 ko04925 map04723 map04745 map04925

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

717

Amino Acids

79.27

Weight (kDa)

6.13

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7358	PF24057	6 - 95	5e-16	Domain of unknown function (DUF7358)
Lipase_3	PF01764	328 - 488	1.1e-11	Lipase (class 3)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05790 AT1G05790 AT1G05790 AT1G05790
fragaria_vesca	FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690 FvH4_4g11690
malus_domestica	MD04G1032500.v1.1 MD04G1032600.v1.1
prunus_persica	Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1 Prupe.1G181900_v2.0.a1
pyrus_communis	pycom04g02680 pycom04g02690
rosa_chinensis	RchiOBHm_Chr4g0408981
rosa_laevigata	RLG00000008601
rosa_multiflora	Rmu_sc0003685.1_g000003 Rmu_sc0031886.1_g000002
rosa_roxburghii	Rroxscaffold_5G00353410
rosa_rugosa	Rorug04G0088900 Rorug04G0088900
rosa_samantha	Rh4AG153000 Rh4BG150900 Rh4CG161400 Rh4DG146400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	596
AccI	GTMKAC	1 cut(s)	1449
AccII	CGCG	2 cut(s)	120, 1101
AciI	CCGC	6 cut(s)	36, 120, 166, 622, 866, 1683
AclWI	GGATC	6 cut(s)	969, 1492, 1616, 1629, 1811, 1868
AcsI	RAATTY	3 cut(s)	1363, 1430, 1460
AcuI	CTGAAG	1 cut(s)	693
AfaI	GTAC	1 cut(s)	903
AfiI	CCNNNNNNNGG	4 cut(s)	282, 366, 383, 1644
AgsI	TTSAA	6 cut(s)	454, 1097, 1187, 1502, 1936, 2017
AjiI	CACGTC	1 cut(s)	1571
AjnI	CCWGG	5 cut(s)	63, 281, 924, 1624, 1894
AjuI	GAANNNNNNNTTGG	2 cut(s)	1740, 1772
Alw21I	GWGCWC	3 cut(s)	72, 1742, 2108
Alw26I	GTCTC	5 cut(s)	13, 365, 614, 659, 998
Alw44I	GTGCAC	1 cut(s)	1738
AlwI	GGATC	6 cut(s)	969, 1492, 1616, 1629, 1811, 1868
AlwNI	CAGNNNCTG	2 cut(s)	719, 1226
AoxI	GGCC	5 cut(s)	121, 356, 1237, 1384, 1897
ApaLI	GTGCAC	1 cut(s)	1738
ApeKI	GCWGC	9 cut(s)	158, 575, 692, 719, 863, 941, 961, 1160, 1508
ApoI	RAATTY	3 cut(s)	1363, 1430, 1460
AspA2I	CCTAGG	1 cut(s)	1309
AspLEI	GCGC	1 cut(s)	1497
AspS9I	GGNCC	5 cut(s)	33, 357, 731, 1385, 1685
AsuHPI	GGTGA	9 cut(s)	566, 630, 851, 994, 1124, 1343, 1757, 1857, 2025
AsuII	TTCGAA	1 cut(s)	2113
AvaII	GGWCC	3 cut(s)	33, 731, 1685
AvrII	CCTAGG	1 cut(s)	1309
BaeGI	GKGCMC	2 cut(s)	53, 1742
BamHI	GGATCC	1 cut(s)	1621
BanII	GRGCYC	1 cut(s)	2108
BauI	CACGAG	1 cut(s)	1967
BbsI	GAAGAC	4 cut(s)	757, 1068, 1082, 1979
Bbv12I	GWGCWC	3 cut(s)	72, 1742, 2108
BbvI	GCAGC	9 cut(s)	145, 587, 679, 706, 875, 928, 948, 1147, 1495
BccI	CCATC	6 cut(s)	24, 403, 830, 1064, 2044, 2061
BceAI	ACGGC	1 cut(s)	1533
BciT130I	CCWGG	5 cut(s)	65, 283, 926, 1626, 1896
BciVI	GTATCC	1 cut(s)	437
BclI	TGATCA	1 cut(s)	465
BcoDI	GTCTC	5 cut(s)	13, 365, 614, 659, 998
BfaI	CTAG	4 cut(s)	257, 1310, 1334, 2133
BfmI	CTRYAG	2 cut(s)	693, 1056
BfuAI	ACCTGC	1 cut(s)	596
BfuI	GTATCC	1 cut(s)	437
BglII	AGATCT	4 cut(s)	697, 1015, 1168, 1850
BlnI	CCTAGG	1 cut(s)	1309
Bme1390I	CCNGG	5 cut(s)	65, 283, 926, 1626, 1896
Bme18I	GGWCC	3 cut(s)	33, 731, 1685
BmgBI	CACGTC	1 cut(s)	1571
BmgT120I	GGNCC	5 cut(s)	33, 357, 731, 1385, 1685
BmiI	GGNNCC	4 cut(s)	626, 732, 1387, 1623
BmrFI	CCNGG	5 cut(s)	65, 283, 926, 1626, 1896
BmsI	GCATC	5 cut(s)	253, 973, 1624, 1789, 2065
BpiI	GAAGAC	4 cut(s)	757, 1068, 1082, 1979
BplI	GAGNNNNNCTC	2 cut(s)	518, 550
BpmI	CTGGAG	1 cut(s)	219
Bpu14I	TTCGAA	1 cut(s)	2113
BpuEI	CTTGAG	2 cut(s)	245, 1216
BsaBI	GATNNNNATC	1 cut(s)	1770
BsaI	GGTCTC	3 cut(s)	13, 614, 998
Bsc4I	CCNNNNNNNGG	4 cut(s)	282, 366, 383, 1644
Bse1I	ACTGG	3 cut(s)	193, 634, 1794
Bse3DI	GCAATG	5 cut(s)	168, 487, 1527, 1803, 2085
Bse8I	GATNNNNATC	1 cut(s)	1770
BseBI	CCWGG	5 cut(s)	65, 283, 926, 1626, 1896
BseGI	GGATG	2 cut(s)	1075, 1271
BseJI	GATNNNNATC	1 cut(s)	1770
BseLI	CCNNNNNNNGG	4 cut(s)	282, 366, 383, 1644
BseMI	GCAATG	5 cut(s)	168, 487, 1527, 1803, 2085
BseMII	CTCAG	8 cut(s)	549, 993, 1354, 1419, 1625, 1703, 1818, 1872
BseNI	ACTGG	3 cut(s)	193, 634, 1794
BseRI	GAGGAG	2 cut(s)	116, 520
BseSI	GKGCMC	2 cut(s)	53, 1742
BseXI	GCAGC	9 cut(s)	145, 587, 679, 706, 875, 928, 948, 1147, 1495
BseYI	CCCAGC	2 cut(s)	550, 1956
BsgI	GTGCAG	1 cut(s)	594
Bsh1236I	CGCG	2 cut(s)	120, 1101
BshFI	GGCC	5 cut(s)	123, 358, 1239, 1386, 1899
BsiHKAI	GWGCWC	3 cut(s)	72, 1742, 2108
BslFI	GGGAC	2 cut(s)	412, 1829
BslI	CCNNNNNNNGG	4 cut(s)	282, 366, 383, 1644
BsmAI	GTCTC	5 cut(s)	13, 365, 614, 659, 998
BsmFI	GGGAC	2 cut(s)	412, 1829
BsmI	GAATGC	2 cut(s)	1287, 1303
BsnI	GGCC	5 cut(s)	123, 358, 1239, 1386, 1899
Bso31I	GGTCTC	3 cut(s)	13, 614, 998
Bsp119I	TTCGAA	1 cut(s)	2113
Bsp1286I	GDGCHC	4 cut(s)	53, 72, 1742, 2108
Bsp19I	CCATGG	3 cut(s)	39, 177, 806
BspACI	CCGC	6 cut(s)	36, 120, 166, 622, 866, 1683
BspANI	GGCC	5 cut(s)	123, 358, 1239, 1386, 1899
BspCNI	CTCAG	8 cut(s)	548, 994, 1353, 1418, 1624, 1702, 1819, 1873
BspFNI	CGCG	2 cut(s)	120, 1101
BspHI	TCATGA	1 cut(s)	1813
BspLI	GGNNCC	4 cut(s)	626, 732, 1387, 1623
BspMAI	CTGCAG	2 cut(s)	697, 1060
BspMI	ACCTGC	1 cut(s)	596
BspPI	GGATC	6 cut(s)	969, 1492, 1616, 1629, 1811, 1868
BspT104I	TTCGAA	1 cut(s)	2113
BspTNI	GGTCTC	3 cut(s)	13, 614, 998
BsrDI	GCAATG	5 cut(s)	168, 487, 1527, 1803, 2085
BsrI	ACTGG	3 cut(s)	193, 634, 1794
BssNAI	GTATAC	1 cut(s)	1450
BssSI	CACGAG	1 cut(s)	1967
BssT1I	CCWWGG	8 cut(s)	39, 177, 360, 806, 1309, 1925, 2060, 2121
Bst1107I	GTATAC	1 cut(s)	1450
Bst2BI	CACGAG	1 cut(s)	1967
Bst2UI	CCWGG	5 cut(s)	65, 283, 926, 1626, 1896
Bst4CI	ACNGT	4 cut(s)	145, 220, 438, 1347
BstAPI	GCANNNNNTGC	2 cut(s)	719, 1655
BstBI	TTCGAA	1 cut(s)	2113
BstC8I	GCNNGC	7 cut(s)	580, 1222, 1471, 1566, 1708, 1738, 2097
BstDSI	CCRYGG	4 cut(s)	39, 177, 806, 978
BstEII	GGTNACC	1 cut(s)	554
BstENI	CCTNNNNNAGG	1 cut(s)	364
BstF5I	GGATG	2 cut(s)	1075, 1271
BstFNI	CGCG	2 cut(s)	120, 1101
BstHHI	GCGC	1 cut(s)	1497
BstMAI	GTCTC	5 cut(s)	13, 365, 614, 659, 998
BstNI	CCWGG	5 cut(s)	65, 283, 926, 1626, 1896
BstNSI	RCATGY	4 cut(s)	206, 1373, 1425, 1942
BstPI	GGTNACC	1 cut(s)	554
BstSCI	CCNGG	5 cut(s)	63, 281, 924, 1624, 1894
BstSFI	CTRYAG	2 cut(s)	693, 1056
BstSLI	GKGCMC	2 cut(s)	53, 1742
BstUI	CGCG	2 cut(s)	120, 1101
BstV1I	GCAGC	9 cut(s)	145, 587, 679, 706, 875, 928, 948, 1147, 1495
BstV2I	GAAGAC	4 cut(s)	757, 1068, 1082, 1979
BstX2I	RGATCY	7 cut(s)	697, 974, 1015, 1168, 1484, 1621, 1850
BstXI	CCANNNNNNTGG	2 cut(s)	46, 64
BstYI	RGATCY	7 cut(s)	697, 974, 1015, 1168, 1484, 1621, 1850
BstZ17I	GTATAC	1 cut(s)	1450
BsuI	GTATCC	1 cut(s)	437
BsuRI	GGCC	5 cut(s)	123, 358, 1239, 1386, 1899
BtgI	CCRYGG	4 cut(s)	39, 177, 806, 978
BtgZI	GCGATG	1 cut(s)	1116
BtrI	CACGTC	1 cut(s)	1571
BtsCI	GGATG	2 cut(s)	1075, 1271
BtsI	GCAGTG	3 cut(s)	51, 207, 1653
BtsIMutI	CAGTG	4 cut(s)	51, 207, 1653, 1801
BveI	ACCTGC	1 cut(s)	596
Cac8I	GCNNGC	7 cut(s)	580, 1222, 1471, 1566, 1708, 1738, 2097
CaiI	CAGNNNCTG	2 cut(s)	719, 1226
CciI	TCATGA	1 cut(s)	1813
CfoI	GCGC	1 cut(s)	1497
Cfr13I	GGNCC	5 cut(s)	33, 357, 731, 1385, 1685
Csp6I	GTAC	1 cut(s)	902
CviQI	GTAC	1 cut(s)	902
DraI	TTTAAA	1 cut(s)	421
EciI	GGCGGA	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	2106
Eco130I	CCWWGG	8 cut(s)	39, 177, 360, 806, 1309, 1925, 2060, 2121
Eco147I	AGGCCT	1 cut(s)	1899
Eco24I	GRGCYC	1 cut(s)	2108
Eco31I	GGTCTC	3 cut(s)	13, 614, 998
Eco47I	GGWCC	3 cut(s)	33, 731, 1685
Eco53kI	GAGCTC	1 cut(s)	2106
Eco57I	CTGAAG	1 cut(s)	693
Eco91I	GGTNACC	1 cut(s)	554
EcoICRI	GAGCTC	1 cut(s)	2106
EcoNI	CCTNNNNNAGG	1 cut(s)	364
EcoO109I	RGGNCCY	1 cut(s)	357
EcoO65I	GGTNACC	1 cut(s)	554
EcoRII	CCWGG	5 cut(s)	63, 281, 924, 1624, 1894
EcoT14I	CCWWGG	8 cut(s)	39, 177, 360, 806, 1309, 1925, 2060, 2121
EcoT22I	ATGCAT	1 cut(s)	1423
EcoT38I	GRGCYC	1 cut(s)	2108
ErhI	CCWWGG	8 cut(s)	39, 177, 360, 806, 1309, 1925, 2060, 2121
FalI	AAGNNNNNCTT	2 cut(s)	742, 774
FaqI	GGGAC	2 cut(s)	412, 1829
FauNDI	CATATG	1 cut(s)	1381
FbaI	TGATCA	1 cut(s)	465
FblI	GTMKAC	1 cut(s)	1449
FokI	GGATG	2 cut(s)	1082, 1278
FriOI	GRGCYC	1 cut(s)	2108
FspBI	CTAG	4 cut(s)	257, 1310, 1334, 2133
GlaI	GCGC	1 cut(s)	1496
GsaI	CCCAGC	2 cut(s)	554, 1960
GsuI	CTGGAG	1 cut(s)	219
HaeIII	GGCC	5 cut(s)	123, 358, 1239, 1386, 1899
HhaI	GCGC	1 cut(s)	1497
Hin6I	GCGC	1 cut(s)	1495
HinP1I	GCGC	1 cut(s)	1495
HincII	GTYRAC	1 cut(s)	922
HindII	GTYRAC	1 cut(s)	922
HindIII	AAGCTT	1 cut(s)	1989
HpaI	GTTAAC	1 cut(s)	922
HphI	GGTGA	9 cut(s)	566, 630, 851, 994, 1124, 1343, 1757, 1857, 2025
Hpy166II	GTNNAC	6 cut(s)	332, 922, 1402, 1450, 1740, 1966
Hpy188III	TCNNGA	8 cut(s)	19, 184, 224, 257, 270, 1814, 2048, 2072
Hpy8I	GTNNAC	6 cut(s)	332, 922, 1402, 1450, 1740, 1966
HpyAV	CCTTC	6 cut(s)	117, 467, 1250, 1400, 1508, 2120
HpyCH4III	ACNGT	4 cut(s)	145, 220, 438, 1347
HpyCH4IV	ACGT	1 cut(s)	1570
HpySE526I	ACGT	1 cut(s)	1570
HspAI	GCGC	1 cut(s)	1495
Ksp22I	TGATCA	1 cut(s)	465
KspAI	GTTAAC	1 cut(s)	922
LmnI	GCTCC	6 cut(s)	290, 401, 1259, 1760, 2103, 2111
Lsp1109I	GCAGC	9 cut(s)	145, 587, 679, 706, 875, 928, 948, 1147, 1495
LweI	GCATC	5 cut(s)	253, 973, 1624, 1789, 2065
MaeI	CTAG	4 cut(s)	257, 1310, 1334, 2133
MaeII	ACGT	1 cut(s)	1570
MaeIII	GTNAC	7 cut(s)	139, 554, 636, 815, 1863, 2031, 2069
MflI	RGATCY	7 cut(s)	697, 974, 1015, 1168, 1484, 1621, 1850
MhlI	GDGCHC	4 cut(s)	53, 72, 1742, 2108
MlyI	GAGTC	6 cut(s)	805, 1223, 1332, 1397, 1603, 1971
MmeI	TCCRAC	1 cut(s)	1462
Mph1103I	ATGCAT	1 cut(s)	1423
MseI	TTAA	5 cut(s)	420, 885, 921, 1559, 1581
MslI	CAYNNNNRTG	1 cut(s)	473
MspA1I	CMGCKG	2 cut(s)	239, 866
MspR9I	CCNGG	5 cut(s)	65, 283, 926, 1626, 1896
Mva1269I	GAATGC	2 cut(s)	1287, 1303
MvaI	CCWGG	5 cut(s)	65, 283, 926, 1626, 1896
MvnI	CGCG	2 cut(s)	120, 1101
NcoI	CCATGG	3 cut(s)	39, 177, 806
NdeI	CATATG	1 cut(s)	1381
NlaIV	GGNNCC	4 cut(s)	626, 732, 1387, 1623
NmuCI	GTSAC	6 cut(s)	139, 554, 636, 1863, 2031, 2069
NsiI	ATGCAT	1 cut(s)	1423
NspI	RCATGY	4 cut(s)	206, 1373, 1425, 1942
NspV	TTCGAA	1 cut(s)	2113
PagI	TCATGA	1 cut(s)	1813
PceI	AGGCCT	1 cut(s)	1899
PctI	GAATGC	2 cut(s)	1287, 1303
PfeI	GAWTC	4 cut(s)	230, 1532, 1544, 2138
PleI	GAGTC	6 cut(s)	805, 1223, 1332, 1397, 1603, 1970
PpsI	GAGTC	6 cut(s)	805, 1223, 1332, 1397, 1603, 1970
Psp124BI	GAGCTC	1 cut(s)	2108
Psp6I	CCWGG	5 cut(s)	63, 281, 924, 1624, 1894
PspEI	GGTNACC	1 cut(s)	554
PspFI	CCCAGC	2 cut(s)	550, 1956
PspGI	CCWGG	5 cut(s)	63, 281, 924, 1624, 1894
PspN4I	GGNNCC	4 cut(s)	626, 732, 1387, 1623
PspPI	GGNCC	5 cut(s)	33, 357, 731, 1385, 1685
PstI	CTGCAG	2 cut(s)	697, 1060
PstNI	CAGNNNCTG	2 cut(s)	719, 1226
PsuI	RGATCY	7 cut(s)	697, 974, 1015, 1168, 1484, 1621, 1850
PvuII	CAGCTG	1 cut(s)	239
RsaI	GTAC	1 cut(s)	903
RsaNI	GTAC	1 cut(s)	902
RseI	CAYNNNNRTG	1 cut(s)	473
SacI	GAGCTC	1 cut(s)	2108
SaqAI	TTAA	5 cut(s)	420, 885, 921, 1559, 1581
Sau96I	GGNCC	5 cut(s)	33, 357, 731, 1385, 1685
SchI	GAGTC	6 cut(s)	805, 1223, 1332, 1397, 1603, 1971
ScrFI	CCNGG	5 cut(s)	65, 283, 926, 1626, 1896
SduI	GDGCHC	4 cut(s)	53, 72, 1742, 2108
SfaNI	GCATC	5 cut(s)	253, 973, 1624, 1789, 2065
SfcI	CTRYAG	2 cut(s)	693, 1056
SfuI	TTCGAA	1 cut(s)	2113
SinI	GGWCC	3 cut(s)	33, 731, 1685
SmiMI	CAYNNNNRTG	1 cut(s)	473
SmlI	CTYRAG	3 cut(s)	17, 224, 1231
SmoI	CTYRAG	3 cut(s)	17, 224, 1231
SseBI	AGGCCT	1 cut(s)	1899
SsiI	CCGC	6 cut(s)	36, 120, 166, 622, 866, 1683
SspMI	CTAG	4 cut(s)	257, 1310, 1334, 2133
SstI	GAGCTC	1 cut(s)	2108
StuI	AGGCCT	1 cut(s)	1899
StyD4I	CCNGG	5 cut(s)	63, 281, 924, 1624, 1894
StyI	CCWWGG	8 cut(s)	39, 177, 360, 806, 1309, 1925, 2060, 2121
TaaI	ACNGT	4 cut(s)	145, 220, 438, 1347
TaiI	ACGT	1 cut(s)	1573
TaqI	TCGA	5 cut(s)	271, 321, 544, 2049, 2113
TauI	GCSGC	2 cut(s)	123, 869
TfiI	GAWTC	4 cut(s)	230, 1532, 1544, 2138
Tru1I	TTAA	5 cut(s)	420, 885, 921, 1559, 1581
Tru9I	TTAA	5 cut(s)	420, 885, 921, 1559, 1581
TscAI	CASTG	4 cut(s)	58, 214, 1660, 1801
TseFI	GTSAC	6 cut(s)	139, 554, 636, 1863, 2031, 2069
TseI	GCWGC	9 cut(s)	158, 575, 692, 719, 863, 941, 961, 1160, 1508
Tsp45I	GTSAC	6 cut(s)	139, 554, 636, 1863, 2031, 2069
TspDTI	ATGAA	4 cut(s)	318, 692, 1473, 1898
TspGWI	ACGGA	1 cut(s)	967
TspRI	CASTG	4 cut(s)	58, 214, 1660, 1801
VneI	GTGCAC	1 cut(s)	1738
VpaK11BI	GGWCC	3 cut(s)	33, 731, 1685
XagI	CCTNNNNNAGG	1 cut(s)	364
XapI	RAATTY	3 cut(s)	1363, 1430, 1460
XbaI	TCTAGA	1 cut(s)	256
XceI	RCATGY	4 cut(s)	206, 1373, 1425, 1942
XcmI	CCANNNNNNNNNTGG	2 cut(s)	437, 1142
XmaJI	CCTAGG	1 cut(s)	1309
XmiI	GTMKAC	1 cut(s)	1449
XspI	CTAG	4 cut(s)	257, 1310, 1334, 2133
Zsp2I	ATGCAT	1 cut(s)	1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.