histone acetyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g00740 |
| pyrus_communis | pycom09g00930 |
| rosa_chinensis | RchiOBHm_Chr3g0448221 |
| rosa_laevigata | RLG00000025936 |
| rosa_multiflora | Rmu_co8052802.1_g000001 Rmu_sc0005969.1_g000037 Rmu_sc0005969.1_g000043 |
| rosa_rugosa | Rorug02G0609000 |
| rosa_samantha | Rh3BG008500 Rh3CG008600 Rh3DG009200 |
| rosa_wichuraiana | Rw3G000720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 203 |
| Acc36I | ACCTGC | 1 cut(s) | 1414 |
| Acc65I | GGTACC | 1 cut(s) | 1611 |
| AccB1I | GGYRCC | 2 cut(s) | 1074, 1611 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2488 |
| AccI | GTMKAC | 4 cut(s) | 183, 516, 584, 2079 |
| AccII | CGCG | 3 cut(s) | 763, 931, 2692 |
| AciI | CCGC | 8 cut(s) | 45, 236, 588, 659, 763, 874, 1509, 2690 |
| AclWI | GGATC | 2 cut(s) | 704, 1221 |
| AcoI | YGGCCR | 3 cut(s) | 145, 691, 2338 |
| AcsI | RAATTY | 3 cut(s) | 980, 1244, 1927 |
| AcuI | CTGAAG | 4 cut(s) | 321, 465, 1794, 2466 |
| AflIII | ACRYGT | 2 cut(s) | 929, 2092 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1759 |
| AhlI | ACTAGT | 2 cut(s) | 1034, 2303 |
| AjnI | CCWGG | 3 cut(s) | 866, 1323, 2244 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 589, 621 |
| AleI | CACNNNNGTG | 1 cut(s) | 2028 |
| Alw21I | GWGCWC | 4 cut(s) | 555, 916, 993, 2100 |
| Alw26I | GTCTC | 5 cut(s) | 211, 429, 1084, 1802, 2426 |
| AlwI | GGATC | 2 cut(s) | 704, 1221 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1897 |
| Ama87I | CYCGRG | 2 cut(s) | 1079, 2103 |
| AoxI | GGCC | 7 cut(s) | 145, 283, 691, 1521, 2247, 2338, 2525 |
| ApoI | RAATTY | 3 cut(s) | 980, 1244, 1927 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1248, 1280 |
| AseI | ATTAAT | 1 cut(s) | 174 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1437 |
| Asp718I | GGTACC | 1 cut(s) | 1611 |
| AspLEI | GCGC | 1 cut(s) | 595 |
| AspS9I | GGNCC | 3 cut(s) | 67, 1521, 2701 |
| AsuC2I | CCSGG | 1 cut(s) | 65 |
| AsuHPI | GGTGA | 3 cut(s) | 1763, 2119, 2388 |
| AsuII | TTCGAA | 1 cut(s) | 2657 |
| AvaI | CYCGRG | 2 cut(s) | 1079, 2103 |
| AvaII | GGWCC | 2 cut(s) | 67, 2701 |
| AxyI | CCTNAGG | 2 cut(s) | 2705, 2826 |
| BalI | TGGCCA | 1 cut(s) | 2340 |
| BanI | GGYRCC | 2 cut(s) | 1074, 1611 |
| BanII | GRGCYC | 1 cut(s) | 867 |
| BbsI | GAAGAC | 2 cut(s) | 66, 1586 |
| Bbv12I | GWGCWC | 4 cut(s) | 555, 916, 993, 2100 |
| BceAI | ACGGC | 2 cut(s) | 160, 375 |
| BciT130I | CCWGG | 3 cut(s) | 868, 1325, 2246 |
| BciVI | GTATCC | 1 cut(s) | 1466 |
| BclI | TGATCA | 4 cut(s) | 9, 1782, 2353, 2377 |
| BcnI | CCSGG | 1 cut(s) | 65 |
| BcoDI | GTCTC | 5 cut(s) | 211, 429, 1084, 1802, 2426 |
| BcuI | ACTAGT | 2 cut(s) | 1034, 2303 |
| BfaI | CTAG | 5 cut(s) | 1035, 1139, 1692, 2304, 2726 |
| BfmI | CTRYAG | 2 cut(s) | 718, 1407 |
| BfoI | RGCGCY | 1 cut(s) | 596 |
| BfuAI | ACCTGC | 1 cut(s) | 1414 |
| BfuI | GTATCC | 1 cut(s) | 1466 |
| BglII | AGATCT | 1 cut(s) | 1024 |
| BmcAI | AGTACT | 3 cut(s) | 510, 1699, 2115 |
| Bme1390I | CCNGG | 4 cut(s) | 65, 868, 1325, 2246 |
| Bme18I | GGWCC | 2 cut(s) | 67, 2701 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1759 |
| BmeT110I | CYCGRG | 2 cut(s) | 1079, 2103 |
| BmgT120I | GGNCC | 3 cut(s) | 67, 1521, 2701 |
| BmiI | GGNNCC | 7 cut(s) | 272, 363, 495, 864, 1076, 1613, 1867 |
| BmrFI | CCNGG | 4 cut(s) | 65, 868, 1325, 2246 |
| BmrI | ACTGGG | 2 cut(s) | 1710, 1907 |
| BmsI | GCATC | 4 cut(s) | 441, 647, 1878, 1894 |
| BmuI | ACTGGG | 2 cut(s) | 1710, 1907 |
| BpiI | GAAGAC | 2 cut(s) | 66, 1586 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1319, 1351 |
| BpmI | CTGGAG | 2 cut(s) | 2141, 2628 |
| Bpu14I | TTCGAA | 1 cut(s) | 2657 |
| BpuEI | CTTGAG | 1 cut(s) | 1499 |
| BpuMI | CCSGG | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 5 cut(s) | 866, 867, 1260, 1716, 2400 |
| BsaWI | WCCGGW | 1 cut(s) | 641 |
| Bse118I | RCCGGY | 2 cut(s) | 147, 2523 |
| Bse1I | ACTGG | 8 cut(s) | 272, 1592, 1615, 1705, 1902, 2000, 2124, 2778 |
| Bse21I | CCTNAGG | 2 cut(s) | 2705, 2826 |
| BseBI | CCWGG | 3 cut(s) | 868, 1325, 2246 |
| BseDI | CCNNGG | 5 cut(s) | 866, 867, 1260, 1716, 2400 |
| BseGI | GGATG | 5 cut(s) | 10, 538, 638, 1564, 1909 |
| BseMII | CTCAG | 9 cut(s) | 563, 723, 1122, 1350, 1414, 2296, 2301, 2696, 2817 |
| BseNI | ACTGG | 8 cut(s) | 272, 1592, 1615, 1705, 1902, 2000, 2124, 2778 |
| BseRI | GAGGAG | 4 cut(s) | 506, 875, 1817, 1820 |
| BseX3I | CGGCCG | 1 cut(s) | 145 |
| BseYI | CCCAGC | 1 cut(s) | 2831 |
| BsgI | GTGCAG | 3 cut(s) | 251, 2280, 2611 |
| Bsh1236I | CGCG | 3 cut(s) | 763, 931, 2692 |
| Bsh1285I | CGRYCG | 2 cut(s) | 49, 148 |
| BshFI | GGCC | 7 cut(s) | 147, 285, 693, 1523, 2249, 2340, 2527 |
| BshNI | GGYRCC | 2 cut(s) | 1074, 1611 |
| BsiEI | CGRYCG | 2 cut(s) | 49, 148 |
| BsiHKAI | GWGCWC | 4 cut(s) | 555, 916, 993, 2100 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1079, 2103 |
| BsiSI | CCGG | 5 cut(s) | 65, 148, 642, 694, 2524 |
| BslFI | GGGAC | 2 cut(s) | 1857, 2758 |
| BsmAI | GTCTC | 5 cut(s) | 211, 429, 1084, 1802, 2426 |
| BsmBI | CGTCTC | 1 cut(s) | 1084 |
| BsmFI | GGGAC | 2 cut(s) | 1857, 2758 |
| BsmI | GAATGC | 3 cut(s) | 1712, 2653, 2843 |
| BsnI | GGCC | 7 cut(s) | 147, 285, 693, 1523, 2249, 2340, 2527 |
| BsoBI | CYCGRG | 2 cut(s) | 1079, 2103 |
| Bsp119I | TTCGAA | 1 cut(s) | 2657 |
| Bsp1286I | GDGCHC | 5 cut(s) | 555, 867, 916, 993, 2100 |
| BspACI | CCGC | 8 cut(s) | 45, 236, 588, 659, 763, 874, 1509, 2690 |
| BspANI | GGCC | 7 cut(s) | 147, 285, 693, 1523, 2249, 2340, 2527 |
| BspCNI | CTCAG | 9 cut(s) | 564, 724, 1123, 1349, 1413, 2295, 2302, 2697, 2818 |
| BspFNI | CGCG | 3 cut(s) | 763, 931, 2692 |
| BspHI | TCATGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 7 cut(s) | 272, 363, 495, 864, 1076, 1613, 1867 |
| BspMAI | CTGCAG | 1 cut(s) | 1411 |
| BspMI | ACCTGC | 1 cut(s) | 1414 |
| BspPI | GGATC | 2 cut(s) | 704, 1221 |
| BspQI | GCTCTTC | 2 cut(s) | 543, 1443 |
| BspT104I | TTCGAA | 1 cut(s) | 2657 |
| BspT107I | GGYRCC | 2 cut(s) | 1074, 1611 |
| BsrFI | RCCGGY | 2 cut(s) | 147, 2523 |
| BsrI | ACTGG | 8 cut(s) | 272, 1592, 1615, 1705, 1902, 2000, 2124, 2778 |
| BssAI | RCCGGY | 2 cut(s) | 147, 2523 |
| BssECI | CCNNGG | 5 cut(s) | 866, 867, 1260, 1716, 2400 |
| BssT1I | CCWWGG | 2 cut(s) | 1260, 1716 |
| Bst2UI | CCWGG | 3 cut(s) | 868, 1325, 2246 |
| Bst4CI | ACNGT | 7 cut(s) | 292, 677, 686, 1189, 2077, 2404, 2817 |
| Bst6I | CTCTTC | 3 cut(s) | 297, 543, 1443 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 229, 1965 |
| BstBI | TTCGAA | 1 cut(s) | 2657 |
| BstC8I | GCNNGC | 2 cut(s) | 318, 1525 |
| BstDSI | CCRYGG | 1 cut(s) | 2400 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2243 |
| BstF5I | GGATG | 5 cut(s) | 10, 538, 638, 1564, 1909 |
| BstFNI | CGCG | 3 cut(s) | 763, 931, 2692 |
| BstH2I | RGCGCY | 1 cut(s) | 596 |
| BstHHI | GCGC | 1 cut(s) | 595 |
| BstMAI | GTCTC | 5 cut(s) | 211, 429, 1084, 1802, 2426 |
| BstMCI | CGRYCG | 2 cut(s) | 49, 148 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 229, 830, 871, 1597, 1965, 2337 |
| BstNI | CCWGG | 3 cut(s) | 868, 1325, 2246 |
| BstNSI | RCATGY | 4 cut(s) | 2068, 2096, 2328, 2498 |
| BstSCI | CCNGG | 4 cut(s) | 63, 866, 1323, 2244 |
| BstSFI | CTRYAG | 2 cut(s) | 718, 1407 |
| BstUI | CGCG | 3 cut(s) | 763, 931, 2692 |
| BstV2I | GAAGAC | 2 cut(s) | 66, 1586 |
| BstX2I | RGATCY | 2 cut(s) | 1024, 1213 |
| BstYI | RGATCY | 2 cut(s) | 1024, 1213 |
| BstZI | CGGCCG | 1 cut(s) | 145 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2705, 2826 |
| BsuI | GTATCC | 1 cut(s) | 1466 |
| BsuRI | GGCC | 7 cut(s) | 147, 285, 693, 1523, 2249, 2340, 2527 |
| BtgI | CCRYGG | 1 cut(s) | 2400 |
| BtgZI | GCGATG | 1 cut(s) | 1853 |
| BtsCI | GGATG | 5 cut(s) | 10, 538, 638, 1564, 1909 |
| BtsI | GCAGTG | 3 cut(s) | 355, 422, 2599 |
| BtsIMutI | CAGTG | 9 cut(s) | 355, 422, 1993, 2015, 2261, 2290, 2297, 2599, 2822 |
| BveI | ACCTGC | 1 cut(s) | 1414 |
| Cac8I | GCNNGC | 2 cut(s) | 318, 1525 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1897 |
| CciI | TCATGA | 1 cut(s) | 153 |
| CfoI | GCGC | 1 cut(s) | 595 |
| Cfr10I | RCCGGY | 2 cut(s) | 147, 2523 |
| Cfr13I | GGNCC | 3 cut(s) | 67, 1521, 2701 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 203 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1759 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 203 |
| EaeI | YGGCCR | 3 cut(s) | 145, 691, 2338 |
| EagI | CGGCCG | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 3 cut(s) | 297, 543, 1443 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1759 |
| EarI | CTCTTC | 3 cut(s) | 297, 543, 1443 |
| EclXI | CGGCCG | 1 cut(s) | 145 |
| Eco130I | CCWWGG | 2 cut(s) | 1260, 1716 |
| Eco147I | AGGCCT | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 867 |
| Eco32I | GATATC | 2 cut(s) | 793, 808 |
| Eco47I | GGWCC | 2 cut(s) | 67, 2701 |
| Eco52I | CGGCCG | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 4 cut(s) | 321, 465, 1794, 2466 |
| Eco81I | CCTNAGG | 2 cut(s) | 2705, 2826 |
| Eco88I | CYCGRG | 2 cut(s) | 1079, 2103 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2243 |
| EcoRI | GAATTC | 2 cut(s) | 980, 1244 |
| EcoRII | CCWGG | 3 cut(s) | 866, 1323, 2244 |
| EcoRV | GATATC | 2 cut(s) | 793, 808 |
| EcoT14I | CCWWGG | 2 cut(s) | 1260, 1716 |
| EcoT22I | ATGCAT | 1 cut(s) | 603 |
| EcoT38I | GRGCYC | 1 cut(s) | 867 |
| ErhI | CCWWGG | 2 cut(s) | 1260, 1716 |
| Esp3I | CGTCTC | 1 cut(s) | 1084 |
| FaqI | GGGAC | 2 cut(s) | 1857, 2758 |
| FauNDI | CATATG | 1 cut(s) | 1517 |
| FbaI | TGATCA | 4 cut(s) | 9, 1782, 2353, 2377 |
| FblI | GTMKAC | 4 cut(s) | 183, 516, 584, 2079 |
| FokI | GGATG | 5 cut(s) | 17, 545, 625, 1551, 1916 |
| FriOI | GRGCYC | 1 cut(s) | 867 |
| FspBI | CTAG | 5 cut(s) | 1035, 1139, 1692, 2304, 2726 |
| GlaI | GCGC | 1 cut(s) | 594 |
| GsaI | CCCAGC | 1 cut(s) | 2835 |
| GsuI | CTGGAG | 2 cut(s) | 2141, 2628 |
| HaeII | RGCGCY | 1 cut(s) | 596 |
| HaeIII | GGCC | 7 cut(s) | 147, 285, 693, 1523, 2249, 2340, 2527 |
| HapII | CCGG | 5 cut(s) | 65, 148, 642, 694, 2524 |
| HhaI | GCGC | 1 cut(s) | 595 |
| Hin6I | GCGC | 1 cut(s) | 593 |
| HinP1I | GCGC | 1 cut(s) | 593 |
| HincII | GTYRAC | 5 cut(s) | 142, 184, 517, 543, 2080 |
| HindII | GTYRAC | 5 cut(s) | 142, 184, 517, 543, 2080 |
| HpaI | GTTAAC | 2 cut(s) | 142, 543 |
| HpaII | CCGG | 5 cut(s) | 65, 148, 642, 694, 2524 |
| HphI | GGTGA | 3 cut(s) | 1763, 2119, 2388 |
| Hpy99I | CGWCG | 2 cut(s) | 188, 521 |
| HpyAV | CCTTC | 7 cut(s) | 376, 392, 1095, 1142, 1542, 1637, 2441 |
| HpyCH4III | ACNGT | 7 cut(s) | 292, 677, 686, 1189, 2077, 2404, 2817 |
| HpyCH4IV | ACGT | 1 cut(s) | 186 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 229, 830, 871, 1597, 1965, 2337 |
| HpySE526I | ACGT | 1 cut(s) | 186 |
| HspAI | GCGC | 1 cut(s) | 593 |
| KpnI | GGTACC | 1 cut(s) | 1615 |
| Ksp22I | TGATCA | 4 cut(s) | 9, 1782, 2353, 2377 |
| KspAI | GTTAAC | 2 cut(s) | 142, 543 |
| LguI | GCTCTTC | 2 cut(s) | 543, 1443 |
| LmnI | GCTCC | 4 cut(s) | 367, 493, 862, 2484 |
| LweI | GCATC | 4 cut(s) | 441, 647, 1878, 1894 |
| MaeI | CTAG | 5 cut(s) | 1035, 1139, 1692, 2304, 2726 |
| MaeII | ACGT | 1 cut(s) | 186 |
| MflI | RGATCY | 2 cut(s) | 1024, 1213 |
| MhlI | GDGCHC | 5 cut(s) | 555, 867, 916, 993, 2100 |
| MlsI | TGGCCA | 1 cut(s) | 2340 |
| MluCI | AATT | 7 cut(s) | 980, 1244, 1815, 1927, 2228, 2559, 2677 |
| MluI | ACGCGT | 1 cut(s) | 929 |
| MluNI | TGGCCA | 1 cut(s) | 2340 |
| MlyI | GAGTC | 6 cut(s) | 314, 431, 583, 658, 1059, 2464 |
| MmeI | TCCRAC | 2 cut(s) | 29, 2469 |
| Mox20I | TGGCCA | 1 cut(s) | 2340 |
| Mph1103I | ATGCAT | 1 cut(s) | 603 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1437 |
| MscI | TGGCCA | 1 cut(s) | 2340 |
| MseI | TTAA | 6 cut(s) | 141, 174, 542, 1596, 1913, 2562 |
| MslI | CAYNNNNRTG | 9 cut(s) | 158, 558, 1271, 1746, 1851, 2028, 2069, 2283, 2771 |
| Msp20I | TGGCCA | 1 cut(s) | 2340 |
| MspI | CCGG | 5 cut(s) | 65, 148, 642, 694, 2524 |
| MspR9I | CCNGG | 4 cut(s) | 65, 868, 1325, 2246 |
| Mva1269I | GAATGC | 3 cut(s) | 1712, 2653, 2843 |
| MvaI | CCWGG | 3 cut(s) | 868, 1325, 2246 |
| MvnI | CGCG | 3 cut(s) | 763, 931, 2692 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 229, 830, 871, 1597, 1965, 2337 |
| NciI | CCSGG | 1 cut(s) | 65 |
| NdeI | CATATG | 1 cut(s) | 1517 |
| NlaIV | GGNNCC | 7 cut(s) | 272, 363, 495, 864, 1076, 1613, 1867 |
| NmuCI | GTSAC | 7 cut(s) | 306, 1046, 1423, 1504, 1720, 1751, 2413 |
| NsiI | ATGCAT | 1 cut(s) | 603 |
| NspI | RCATGY | 4 cut(s) | 2068, 2096, 2328, 2498 |
| NspV | TTCGAA | 1 cut(s) | 2657 |
| OliI | CACNNNNGTG | 1 cut(s) | 2028 |
| PaeR7I | CTCGAG | 1 cut(s) | 1079 |
| PagI | TCATGA | 1 cut(s) | 153 |
| PasI | CCCWGGG | 1 cut(s) | 867 |
| PceI | AGGCCT | 1 cut(s) | 285 |
| PciI | ACATGT | 1 cut(s) | 2092 |
| PciSI | GCTCTTC | 2 cut(s) | 543, 1443 |
| PctI | GAATGC | 3 cut(s) | 1712, 2653, 2843 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1437 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2488 |
| PfoI | TCCNGGA | 1 cut(s) | 1323 |
| PleI | GAGTC | 6 cut(s) | 313, 430, 582, 658, 1059, 2463 |
| PpsI | GAGTC | 6 cut(s) | 313, 430, 582, 658, 1059, 2463 |
| PscI | ACATGT | 1 cut(s) | 2092 |
| PshBI | ATTAAT | 1 cut(s) | 174 |
| Psp6I | CCWGG | 3 cut(s) | 866, 1323, 2244 |
| PspFI | CCCAGC | 1 cut(s) | 2831 |
| PspGI | CCWGG | 3 cut(s) | 866, 1323, 2244 |
| PspN4I | GGNNCC | 7 cut(s) | 272, 363, 495, 864, 1076, 1613, 1867 |
| PspPI | GGNCC | 3 cut(s) | 67, 1521, 2701 |
| PspXI | VCTCGAGB | 1 cut(s) | 1079 |
| PstI | CTGCAG | 1 cut(s) | 1411 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1897 |
| PsuI | RGATCY | 2 cut(s) | 1024, 1213 |
| RseI | CAYNNNNRTG | 9 cut(s) | 158, 558, 1271, 1746, 1851, 2028, 2069, 2283, 2771 |
| SalI | GTCGAC | 3 cut(s) | 182, 515, 2078 |
| SapI | GCTCTTC | 2 cut(s) | 543, 1443 |
| SaqAI | TTAA | 6 cut(s) | 141, 174, 542, 1596, 1913, 2562 |
| Sau96I | GGNCC | 3 cut(s) | 67, 1521, 2701 |
| ScaI | AGTACT | 3 cut(s) | 510, 1699, 2115 |
| SchI | GAGTC | 6 cut(s) | 314, 431, 583, 658, 1059, 2464 |
| ScrFI | CCNGG | 4 cut(s) | 65, 868, 1325, 2246 |
| SduI | GDGCHC | 5 cut(s) | 555, 867, 916, 993, 2100 |
| SfaNI | GCATC | 4 cut(s) | 441, 647, 1878, 1894 |
| SfcI | CTRYAG | 2 cut(s) | 718, 1407 |
| Sfr274I | CTCGAG | 1 cut(s) | 1079 |
| SfuI | TTCGAA | 1 cut(s) | 2657 |
| SinI | GGWCC | 2 cut(s) | 67, 2701 |
| SlaI | CTCGAG | 1 cut(s) | 1079 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 158, 558, 1271, 1746, 1851, 2028, 2069, 2283, 2771 |
| SmlI | CTYRAG | 2 cut(s) | 1079, 1478 |
| SmoI | CTYRAG | 2 cut(s) | 1079, 1478 |
| SpeI | ACTAGT | 2 cut(s) | 1034, 2303 |
| Sse9I | AATT | 7 cut(s) | 980, 1244, 1815, 1927, 2228, 2559, 2677 |
| SseBI | AGGCCT | 1 cut(s) | 285 |
| SsiI | CCGC | 8 cut(s) | 45, 236, 588, 659, 763, 874, 1509, 2690 |
| SspMI | CTAG | 5 cut(s) | 1035, 1139, 1692, 2304, 2726 |
| StuI | AGGCCT | 1 cut(s) | 285 |
| StyD4I | CCNGG | 4 cut(s) | 63, 866, 1323, 2244 |
| StyI | CCWWGG | 2 cut(s) | 1260, 1716 |
| TaaI | ACNGT | 7 cut(s) | 292, 677, 686, 1189, 2077, 2404, 2817 |
| TaiI | ACGT | 1 cut(s) | 189 |
| TasI | AATT | 7 cut(s) | 980, 1244, 1815, 1927, 2228, 2559, 2677 |
| TatI | WGTACW | 7 cut(s) | 331, 508, 672, 1557, 1697, 2113, 2712 |
| TauI | GCSGC | 2 cut(s) | 238, 662 |
| Tru1I | TTAA | 6 cut(s) | 141, 174, 542, 1596, 1913, 2562 |
| Tru9I | TTAA | 6 cut(s) | 141, 174, 542, 1596, 1913, 2562 |
| TscAI | CASTG | 9 cut(s) | 355, 422, 2000, 2015, 2268, 2290, 2304, 2599, 2822 |
| TseFI | GTSAC | 7 cut(s) | 306, 1046, 1423, 1504, 1720, 1751, 2413 |
| Tsp45I | GTSAC | 7 cut(s) | 306, 1046, 1423, 1504, 1720, 1751, 2413 |
| TspDTI | ATGAA | 7 cut(s) | 18, 91, 142, 1137, 1473, 1656, 1921 |
| TspRI | CASTG | 9 cut(s) | 355, 422, 2000, 2015, 2268, 2290, 2304, 2599, 2822 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2488 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 2701 |
| VspI | ATTAAT | 1 cut(s) | 174 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2243 |
| XapI | RAATTY | 3 cut(s) | 980, 1244, 1927 |
| XceI | RCATGY | 4 cut(s) | 2068, 2096, 2328, 2498 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2048 |
| XhoI | CTCGAG | 1 cut(s) | 1079 |
| XmiI | GTMKAC | 4 cut(s) | 183, 516, 584, 2079 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1437 |
| XspI | CTAG | 5 cut(s) | 1035, 1139, 1692, 2304, 2726 |
| ZrmI | AGTACT | 3 cut(s) | 510, 1699, 2115 |
| Zsp2I | ATGCAT | 1 cut(s) | 603 |