Rh3DG009200

histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0017675
Physical Location & Seq
Reverse (-)
568964 .. 571816
2853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG009200.1

Sequence Viewer

Length: 2247 bp
ATGGATGTGATCAAGAGATTCAGTAGTTCATCGGAGATTTTCGGCGGTCGGATTCAGGGCTACCCGGAACTGTCTTCGATTTCGAGCCTTTTTGATGATTTCGTAGGAGGGATTGCTTTCGATACTAAGCAACAAGATGTTAACGGGTTCATGATGACTTCGGATATTATTAATGTCGACGTTATGCAAGTCCCACAAGTCTCAAATCTTGATGGGCAGAATGTGCAGCCGCCGCCAGTGACAAAGATGTACAAACGAAACCGGAACCAAAAGAGAGGCCTTACTGTTTCTTCAGAAGAGTCACAACAGCCTGCTGATTCAGATGAACTTAGTTCGGGAAGCAGTGAAGATACGGCTCCTTGTTCGAAAAGGTTGAAGGTTGAGAGTAAACAAGGACTCCCGCAGTATCTGCCAACTAGTATGCTTAGTGACCACATAGAGAAAAGACTCATTAGGTGCCTCGAGCAAGAGAGACGAAAGAGAAGGTCAAAGGATAAAGGAAATGAATCTTCTGAGGTTCTAGGTGTGGAAGGTCTTGTTGTAAGAGAGGTTTTATCGGTTGGGAAAACAGTAAAAGTGAAGCAGCAGTATTTGGGTCTGTTTCCTGAACAGAGTTACCCTGCTGAATTCCCATACAAATCCAAGGTCATTCTTATGTTTCAGAAGATTGATGGTGTAGATGTGTGTATTTTCGGAATGTATGTGCAGGAGTTCGGCTCAGAATGTAGCTATCCAAATAAGGGTTGTGTTTATATATCATATCTTGATTCAGTCAAGTACTTCAGACCTGCAGAAGCAAGAGCTGTGACAGGAGAAGCTCTTCGGACATTTGTTTACCATGAAGTACTGATAGGATACCTTGAGTTTTGCAAGAAACAGGGCTTCGTGACCGCCTACATATGGGCCTGCCCCCCTTCAAAGGAAGAAGATTATATTCTGTACTGCCATCCACCAATGCAGAAGACACCCTTGCCAGTTAAGCTGCGTAAATGGTATCAGTCGATGATAAAGAAAGCAAGTAATGAAGGGATTGTGGTCGGCACTACTAACCTATATGATCGGTATTTTATTCCTAGTAGTACTGGGGAATGCCACTCCAAGGTCACAGCAGCTCGTTTGCCACATTTTGATGGTGACTATTGGTCTAATGCTGCTGAAGATTTGATCAAGGAGATTGGCAAGGAGGAGACAAAAATTAGAAAGAGAACTTTAGAAGCGATGGGACATACAAATGCTTCTGATGGTTCCACCAAAGATATTCTTCTGATGCAGAAACTGGGGGATGCTATCTTAACCAACAGGGAGAATTTCATGGTTGTTGATTTGCAGTATGTTTGCATACGCTGCAACGAAGCGATATTATCTGGGGAACACTGGTCTTGTAGTCAGTGCAAAAACTTTCACCTTTGTGAAAAATGCCATAGCCTTTGTGGTGGGAAGAACACGCACATGACAGTCGACATGGAACAACATGTGCTCTCTCGGGTGATAGTACTACTGGAGGATTATGAGCTTCCTGATACAAAGGATAGAGAGGTTATTTTGAACAATGGTTTATTTGAGGAAAGGACTTCTTTCTTGAACTTCTGTGTGAAGAATCATTATCAATTTGACACCCTACGCCAGGCCAAGTATTCCTCACTGATGATTCTCCATCATCTCAGTGATCTTACTGCACTGACTAGCGCTGAGAAGAACAAGACATGCAGCAGCATTGGCCATAAAGTTGCTGATCAGAGCTGGATATGTGAGATTGATCAAGACAGAGGCAGTTCACCCACGGTTGGTCGTGTGACAAAGATCAGTAGAGAGACACAACTGACTGAAGGATTGAGTCCAGCATTGATAAAGGAACTGCTCCATGTGTTGGAACATGCTGCTGTGTGTTACCCTATCAAGAACCGGCCTTGCTCTTACCCCAACACAAACTGCCTCAAAATTAAAAAGCTATTTGTCCATGTAAAGAAGTGCAGTGTTCGAGCTGCTGGAGGTTGTGAACTATGTAAAAAGGCATGGCTTGGATTGATTTTGCATTCGAAAGAATGTAGAAAATCAAATTGCATTGTACCGCGTTGCATGGACCTGAGGAAGTACACAGATCAGCAAGGGAAAACCAGAGATGGGACTAAAAGCTATAAAGCTAACATTGAGGTGTCCAGTTGTTCAAGCCAGACCTTGTTGCCAACAGAATCACAGTGGTTGCCTGAGGCTGGGATATGGGTATTACCATACATGATTCCATTTTAG

Protein Analysis

748

Amino Acids

84.64

Weight (kDa)

8.27

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_KAT11 PF08214 181 - 402 1.9e-38 Histone acetylation protein
zf-TAZ PF02135 617 - 692 2.6e-09 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017675)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g00740
pyrus_communis pycom09g00930
rosa_chinensis RchiOBHm_Chr3g0448221
rosa_laevigata RLG00000025936
rosa_multiflora Rmu_co8052802.1_g000001 Rmu_sc0005969.1_g000037 Rmu_sc0005969.1_g000043
rosa_rugosa Rorug02G0609000
rosa_samantha Rh3BG008500 Rh3CG008600 Rh3DG009200
rosa_wichuraiana Rw3G000720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 796
AccB1I GGYRCC 1 cut(s) 456
AccB7I CCANNNNNTGG 1 cut(s) 1867
AccI GTMKAC 2 cut(s) 177, 1458
AccII CGCG 1 cut(s) 2071
AciI CCGC 6 cut(s) 45, 230, 233, 401, 891, 2069
AcoI YGGCCR 1 cut(s) 1717
AcsI RAATTY 2 cut(s) 626, 1306
AcuI CTGAAG 4 cut(s) 276, 766, 1176, 1845
AfaI GTAC 8 cut(s) 251, 779, 846, 941, 1081, 1494, 2067, 2093
AfeI AGCGCT 1 cut(s) 1687
AfiI CCNNNNNNNGG 9 cut(s) 740, 900, 919, 1099, 1624, 1784, 1867, 2121, 2210
AflIII ACRYGT 1 cut(s) 1471
AgsI TTSAA 5 cut(s) 376, 918, 1546, 1582, 2166
AhdI GACNNNNNGTC 1 cut(s) 1141
AhlI ACTAGT 1 cut(s) 416
AjnI CCWGG 1 cut(s) 1623
AleI CACNNNNGTG 1 cut(s) 1407
Alw21I GWGCWC 1 cut(s) 1479
Alw26I GTCTC 4 cut(s) 205, 466, 1181, 1805
AlwNI CAGNNNCTG 2 cut(s) 409, 1276
Ama87I CYCGRG 2 cut(s) 461, 1482
Aor51HI AGCGCT 1 cut(s) 1687
AoxI GGCC 5 cut(s) 277, 903, 1626, 1717, 1904
ApoI RAATTY 2 cut(s) 626, 1306
ArsI GACNNNNNNTTYG 2 cut(s) 630, 662
AseI ATTAAT 1 cut(s) 171
Asp700I GAANNNNTTC 1 cut(s) 819
AspLEI GCGC 1 cut(s) 1688
AspS9I GGNCC 2 cut(s) 903, 2080
AsuC2I CCSGG 1 cut(s) 65
AsuHPI GGTGA 4 cut(s) 1145, 1394, 1498, 1767
AsuII TTCGAA 2 cut(s) 365, 2036
AvaI CYCGRG 2 cut(s) 461, 1482
AvaII GGWCC 1 cut(s) 2080
AxyI CCTNAGG 2 cut(s) 2084, 2205
BalI TGGCCA 1 cut(s) 1719
BanI GGYRCC 1 cut(s) 456
BbsI GAAGAC 2 cut(s) 66, 968
Bbv12I GWGCWC 1 cut(s) 1479
BccI CCATC 8 cut(s) 206, 665, 954, 1124, 1213, 1235, 1662, 2114
BceAI ACGGC 1 cut(s) 369
BciT130I CCWGG 1 cut(s) 1625
BciVI GTATCC 1 cut(s) 848
BclI TGATCA 4 cut(s) 9, 1164, 1732, 1756
BcnI CCSGG 1 cut(s) 65
BcoDI GTCTC 4 cut(s) 205, 466, 1181, 1805
BcuI ACTAGT 1 cut(s) 416
BfaI CTAG 4 cut(s) 417, 521, 1074, 1683
BfmI CTRYAG 1 cut(s) 789
BfoI RGCGCY 1 cut(s) 1689
BfuAI ACCTGC 1 cut(s) 796
BfuI GTATCC 1 cut(s) 848
BmcAI AGTACT 4 cut(s) 779, 846, 1081, 1494
Bme1390I CCNGG 2 cut(s) 65, 1625
Bme18I GGWCC 1 cut(s) 2080
BmeRI GACNNNNNGTC 1 cut(s) 1141
BmeT110I CYCGRG 2 cut(s) 461, 1482
BmgT120I GGNCC 2 cut(s) 903, 2080
BmiI GGNNCC 4 cut(s) 266, 357, 458, 1246
BmrFI CCNGG 2 cut(s) 65, 1625
BmrI ACTGGG 2 cut(s) 1092, 1286
BmsI GCATC 2 cut(s) 1257, 1273
BmuI ACTGGG 2 cut(s) 1092, 1286
BpiI GAAGAC 2 cut(s) 66, 968
BplI GAGNNNNNCTC 2 cut(s) 701, 733
BpmI CTGGAG 2 cut(s) 1520, 2007
Bpu14I TTCGAA 2 cut(s) 365, 2036
BpuEI CTTGAG 1 cut(s) 881
BpuMI CCSGG 1 cut(s) 65
BsaJI CCNNGG 3 cut(s) 642, 1098, 1779
BsaWI WCCGGW 1 cut(s) 261
BsaXI ACNNNNNCTCC 2 cut(s) 381, 411
Bsc4I CCNNNNNNNGG 9 cut(s) 740, 900, 919, 1099, 1624, 1784, 1867, 2121, 2210
Bse118I RCCGGY 1 cut(s) 1902
Bse1I ACTGG 7 cut(s) 236, 974, 1087, 1281, 1379, 1503, 2157
Bse21I CCTNAGG 2 cut(s) 2084, 2205
BseBI CCWGG 1 cut(s) 1625
BseDI CCNNGG 3 cut(s) 642, 1098, 1779
BseGI GGATG 3 cut(s) 10, 946, 1288
BseLI CCNNNNNNNGG 9 cut(s) 740, 900, 919, 1099, 1624, 1784, 1867, 2121, 2210
BseMII CTCAG 6 cut(s) 504, 732, 1675, 1680, 2075, 2196
BseNI ACTGG 7 cut(s) 236, 974, 1087, 1281, 1379, 1503, 2157
BseRI GAGGAG 1 cut(s) 1199
BseYI CCCAGC 1 cut(s) 2210
BsgI GTGCAG 4 cut(s) 245, 725, 1659, 1990
Bsh1236I CGCG 1 cut(s) 2071
Bsh1285I CGRYCG 1 cut(s) 49
BshFI GGCC 5 cut(s) 279, 905, 1628, 1719, 1906
BshNI GGYRCC 1 cut(s) 456
BsiEI CGRYCG 1 cut(s) 49
BsiHKAI GWGCWC 1 cut(s) 1479
BsiHKCI CYCGRG 2 cut(s) 461, 1482
BsiSI CCGG 3 cut(s) 65, 262, 1903
BslFI GGGAC 3 cut(s) 176, 1236, 2137
BslI CCNNNNNNNGG 9 cut(s) 740, 900, 919, 1099, 1624, 1784, 1867, 2121, 2210
BsmAI GTCTC 4 cut(s) 205, 466, 1181, 1805
BsmBI CGTCTC 1 cut(s) 466
BsmFI GGGAC 3 cut(s) 176, 1236, 2137
BsmI GAATGC 2 cut(s) 1094, 2032
BsnI GGCC 5 cut(s) 279, 905, 1628, 1719, 1906
BsoBI CYCGRG 2 cut(s) 461, 1482
Bsp119I TTCGAA 2 cut(s) 365, 2036
Bsp1286I GDGCHC 1 cut(s) 1479
Bsp1407I TGTACA 1 cut(s) 249
Bsp143I GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
BspACI CCGC 6 cut(s) 45, 230, 233, 401, 891, 2069
BspANI GGCC 5 cut(s) 279, 905, 1628, 1719, 1906
BspCNI CTCAG 6 cut(s) 505, 731, 1674, 1681, 2076, 2197
BspFNI CGCG 1 cut(s) 2071
BspHI TCATGA 1 cut(s) 150
BspLI GGNNCC 4 cut(s) 266, 357, 458, 1246
BspMAI CTGCAG 1 cut(s) 793
BspMI ACCTGC 1 cut(s) 796
BspQI GCTCTTC 1 cut(s) 825
BspT104I TTCGAA 2 cut(s) 365, 2036
BspT107I GGYRCC 1 cut(s) 456
BsrFI RCCGGY 1 cut(s) 1902
BsrGI TGTACA 1 cut(s) 249
BsrI ACTGG 7 cut(s) 236, 974, 1087, 1281, 1379, 1503, 2157
BssAI RCCGGY 1 cut(s) 1902
BssECI CCNNGG 3 cut(s) 642, 1098, 1779
BssMI GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
BssT1I CCWWGG 2 cut(s) 642, 1098
Bst2UI CCWGG 1 cut(s) 1625
Bst4CI ACNGT 6 cut(s) 72, 286, 571, 1456, 1783, 2196
Bst6I CTCTTC 2 cut(s) 291, 825
BstAPI GCANNNNNTGC 3 cut(s) 223, 409, 1344
BstAUI TGTACA 1 cut(s) 249
BstBI TTCGAA 2 cut(s) 365, 2036
BstC8I GCNNGC 2 cut(s) 312, 907
BstDEI CTNAG 9 cut(s) 126, 329, 425, 513, 718, 1661, 1689, 2084, 2205
BstDSI CCRYGG 1 cut(s) 1779
BstENI CCTNNNNNAGG 1 cut(s) 1622
BstF5I GGATG 3 cut(s) 10, 946, 1288
BstFNI CGCG 1 cut(s) 2071
BstH2I RGCGCY 1 cut(s) 1689
BstHHI GCGC 1 cut(s) 1688
BstKTI GATC 8 cut(s) 12, 1060, 1167, 1669, 1735, 1759, 1803, 2101
BstMAI GTCTC 4 cut(s) 205, 466, 1181, 1805
BstMBI GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
BstMCI CGRYCG 1 cut(s) 49
BstMWI GCNNNNNNNGC 6 cut(s) 223, 232, 409, 979, 1344, 1716
BstNI CCWGG 1 cut(s) 1625
BstNSI RCATGY 3 cut(s) 1475, 1707, 1877
BstSCI CCNGG 2 cut(s) 63, 1623
BstSFI CTRYAG 1 cut(s) 789
BstUI CGCG 1 cut(s) 2071
BstV2I GAAGAC 2 cut(s) 66, 968
Bsu36I CCTNAGG 2 cut(s) 2084, 2205
BsuI GTATCC 1 cut(s) 848
BsuRI GGCC 5 cut(s) 279, 905, 1628, 1719, 1906
BtgI CCRYGG 1 cut(s) 1779
BtgZI GCGATG 1 cut(s) 1232
BtsCI GGATG 3 cut(s) 10, 946, 1288
BtsI GCAGTG 2 cut(s) 349, 1978
BtsIMutI CAGTG 9 cut(s) 243, 349, 1372, 1394, 1640, 1669, 1676, 1978, 2201
BveI ACCTGC 1 cut(s) 796
Cac8I GCNNGC 2 cut(s) 312, 907
CaiI CAGNNNCTG 2 cut(s) 409, 1276
CciI TCATGA 1 cut(s) 150
CfoI GCGC 1 cut(s) 1688
Cfr10I RCCGGY 1 cut(s) 1902
Cfr13I GGNCC 2 cut(s) 903, 2080
Csp6I GTAC 8 cut(s) 250, 778, 845, 940, 1080, 1493, 2066, 2092
CviQI GTAC 8 cut(s) 250, 778, 845, 940, 1080, 1493, 2066, 2092
DdeI CTNAG 9 cut(s) 126, 329, 425, 513, 718, 1661, 1689, 2084, 2205
DpnI GATC 8 cut(s) 11, 1059, 1166, 1668, 1734, 1758, 1802, 2100
DpnII GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
DriI GACNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 1 cut(s) 1717
Eam1104I CTCTTC 2 cut(s) 291, 825
Eam1105I GACNNNNNGTC 1 cut(s) 1141
EarI CTCTTC 2 cut(s) 291, 825
Eco130I CCWWGG 2 cut(s) 642, 1098
Eco147I AGGCCT 1 cut(s) 279
Eco47I GGWCC 1 cut(s) 2080
Eco47III AGCGCT 1 cut(s) 1687
Eco57I CTGAAG 4 cut(s) 276, 766, 1176, 1845
Eco81I CCTNAGG 2 cut(s) 2084, 2205
Eco88I CYCGRG 2 cut(s) 461, 1482
EcoNI CCTNNNNNAGG 1 cut(s) 1622
EcoRI GAATTC 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 1623
EcoT14I CCWWGG 2 cut(s) 642, 1098
ErhI CCWWGG 2 cut(s) 642, 1098
Esp3I CGTCTC 1 cut(s) 466
FalI AAGNNNNNCTT 6 cut(s) 953, 985, 1245, 1277, 1558, 1590
FaqI GGGAC 3 cut(s) 176, 1236, 2137
FauI CCCGC 1 cut(s) 408
FauNDI CATATG 1 cut(s) 899
FbaI TGATCA 4 cut(s) 9, 1164, 1732, 1756
FblI GTMKAC 2 cut(s) 177, 1458
FokI GGATG 3 cut(s) 17, 933, 1295
FspBI CTAG 4 cut(s) 417, 521, 1074, 1683
GlaI GCGC 1 cut(s) 1687
GsaI CCCAGC 1 cut(s) 2214
GsuI CTGGAG 2 cut(s) 1520, 2007
HaeII RGCGCY 1 cut(s) 1689
HaeIII GGCC 5 cut(s) 279, 905, 1628, 1719, 1906
HapII CCGG 3 cut(s) 65, 262, 1903
HhaI GCGC 1 cut(s) 1688
Hin6I GCGC 1 cut(s) 1686
HinP1I GCGC 1 cut(s) 1686
HincII GTYRAC 3 cut(s) 142, 178, 1459
HindII GTYRAC 3 cut(s) 142, 178, 1459
HpaI GTTAAC 1 cut(s) 142
HpaII CCGG 3 cut(s) 65, 262, 1903
HphI GGTGA 4 cut(s) 1145, 1394, 1498, 1767
Hpy166II GTNNAC 8 cut(s) 142, 178, 389, 835, 1459, 1775, 1997, 2094
Hpy8I GTNNAC 8 cut(s) 142, 178, 389, 835, 1459, 1775, 1997, 2094
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 6 cut(s) 370, 477, 524, 924, 1019, 1820
HpyCH4III ACNGT 6 cut(s) 72, 286, 571, 1456, 1783, 2196
HpyCH4IV ACGT 1 cut(s) 180
HpyF10VI GCNNNNNNNGC 6 cut(s) 223, 232, 409, 979, 1344, 1716
HpyF3I CTNAG 9 cut(s) 126, 329, 425, 513, 718, 1661, 1689, 2084, 2205
HpySE526I ACGT 1 cut(s) 180
HspAI GCGC 1 cut(s) 1686
Ksp22I TGATCA 4 cut(s) 9, 1164, 1732, 1756
KspAI GTTAAC 1 cut(s) 142
Kzo9I GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
LguI GCTCTTC 1 cut(s) 825
LmnI GCTCC 2 cut(s) 361, 1863
LweI GCATC 2 cut(s) 1257, 1273
MaeI CTAG 4 cut(s) 417, 521, 1074, 1683
MaeII ACGT 1 cut(s) 180
MalI GATC 8 cut(s) 11, 1059, 1166, 1668, 1734, 1758, 1802, 2100
MboI GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
MhlI GDGCHC 1 cut(s) 1479
MlsI TGGCCA 1 cut(s) 1719
MluCI AATT 6 cut(s) 626, 1194, 1306, 1607, 1938, 2056
MluNI TGGCCA 1 cut(s) 1719
MlyI GAGTC 4 cut(s) 308, 390, 441, 1843
MmeI TCCRAC 2 cut(s) 29, 1848
Mox20I TGGCCA 1 cut(s) 1719
MroXI GAANNNNTTC 1 cut(s) 819
MscI TGGCCA 1 cut(s) 1719
MseI TTAA 5 cut(s) 141, 171, 978, 1292, 1941
MslI CAYNNNNRTG 7 cut(s) 653, 1128, 1230, 1407, 1448, 1662, 2150
Msp20I TGGCCA 1 cut(s) 1719
MspI CCGG 3 cut(s) 65, 262, 1903
MspR9I CCNGG 2 cut(s) 65, 1625
Mva1269I GAATGC 2 cut(s) 1094, 2032
MvaI CCWGG 1 cut(s) 1625
MvnI CGCG 1 cut(s) 2071
MwoI GCNNNNNNNGC 6 cut(s) 223, 232, 409, 979, 1344, 1716
NciI CCSGG 1 cut(s) 65
NdeI CATATG 1 cut(s) 899
NdeII GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
NlaIV GGNNCC 4 cut(s) 266, 357, 458, 1246
NmuCI GTSAC 8 cut(s) 238, 300, 428, 805, 886, 1102, 1133, 1792
NspI RCATGY 3 cut(s) 1475, 1707, 1877
NspV TTCGAA 2 cut(s) 365, 2036
OliI CACNNNNGTG 1 cut(s) 1407
PaeR7I CTCGAG 1 cut(s) 461
PagI TCATGA 1 cut(s) 150
PceI AGGCCT 1 cut(s) 279
PciI ACATGT 1 cut(s) 1471
PciSI GCTCTTC 1 cut(s) 825
PctI GAATGC 2 cut(s) 1094, 2032
PdmI GAANNNNTTC 1 cut(s) 819
PfeI GAWTC 9 cut(s) 18, 52, 317, 506, 767, 1597, 1648, 2189, 2236
PflMI CCANNNNNTGG 1 cut(s) 1867
PleI GAGTC 4 cut(s) 307, 390, 441, 1842
PpsI GAGTC 4 cut(s) 307, 390, 441, 1842
PscI ACATGT 1 cut(s) 1471
PshBI ATTAAT 1 cut(s) 171
Psp6I CCWGG 1 cut(s) 1623
PspFI CCCAGC 1 cut(s) 2210
PspGI CCWGG 1 cut(s) 1623
PspN4I GGNNCC 4 cut(s) 266, 357, 458, 1246
PspPI GGNCC 2 cut(s) 903, 2080
PspXI VCTCGAGB 1 cut(s) 461
PstI CTGCAG 1 cut(s) 793
PstNI CAGNNNCTG 2 cut(s) 409, 1276
RsaI GTAC 8 cut(s) 251, 779, 846, 941, 1081, 1494, 2067, 2093
RsaNI GTAC 8 cut(s) 250, 778, 845, 940, 1080, 1493, 2066, 2092
RseI CAYNNNNRTG 7 cut(s) 653, 1128, 1230, 1407, 1448, 1662, 2150
SalI GTCGAC 2 cut(s) 176, 1457
SapI GCTCTTC 1 cut(s) 825
SaqAI TTAA 5 cut(s) 141, 171, 978, 1292, 1941
Sau3AI GATC 8 cut(s) 9, 1057, 1164, 1666, 1732, 1756, 1800, 2098
Sau96I GGNCC 2 cut(s) 903, 2080
ScaI AGTACT 4 cut(s) 779, 846, 1081, 1494
SchI GAGTC 4 cut(s) 308, 390, 441, 1843
ScrFI CCNGG 2 cut(s) 65, 1625
SduI GDGCHC 1 cut(s) 1479
SfaNI GCATC 2 cut(s) 1257, 1273
SfcI CTRYAG 1 cut(s) 789
Sfr274I CTCGAG 1 cut(s) 461
SfuI TTCGAA 2 cut(s) 365, 2036
SinI GGWCC 1 cut(s) 2080
SlaI CTCGAG 1 cut(s) 461
SmiMI CAYNNNNRTG 7 cut(s) 653, 1128, 1230, 1407, 1448, 1662, 2150
SmlI CTYRAG 2 cut(s) 461, 860
SmoI CTYRAG 2 cut(s) 461, 860
SpeI ACTAGT 1 cut(s) 416
Sse9I AATT 6 cut(s) 626, 1194, 1306, 1607, 1938, 2056
SseBI AGGCCT 1 cut(s) 279
SsiI CCGC 6 cut(s) 45, 230, 233, 401, 891, 2069
SspMI CTAG 4 cut(s) 417, 521, 1074, 1683
StuI AGGCCT 1 cut(s) 279
StyD4I CCNGG 2 cut(s) 63, 1623
StyI CCWWGG 2 cut(s) 642, 1098
TaaI ACNGT 6 cut(s) 72, 286, 571, 1456, 1783, 2196
TaiI ACGT 1 cut(s) 183
TasI AATT 6 cut(s) 626, 1194, 1306, 1607, 1938, 2056
TatI WGTACW 7 cut(s) 249, 777, 844, 939, 1079, 1492, 2091
TauI GCSGC 2 cut(s) 232, 235
TfiI GAWTC 9 cut(s) 18, 52, 317, 506, 767, 1597, 1648, 2189, 2236
Tru1I TTAA 5 cut(s) 141, 171, 978, 1292, 1941
Tru9I TTAA 5 cut(s) 141, 171, 978, 1292, 1941
TscAI CASTG 9 cut(s) 243, 349, 1379, 1394, 1647, 1669, 1683, 1978, 2201
TseFI GTSAC 8 cut(s) 238, 300, 428, 805, 886, 1102, 1133, 1792
Tsp45I GTSAC 8 cut(s) 238, 300, 428, 805, 886, 1102, 1133, 1792
TspDTI ATGAA 7 cut(s) 18, 139, 339, 519, 855, 1038, 1300
TspRI CASTG 9 cut(s) 243, 349, 1379, 1394, 1647, 1669, 1683, 1978, 2201
Van91I CCANNNNNTGG 1 cut(s) 1867
VpaK11BI GGWCC 1 cut(s) 2080
VspI ATTAAT 1 cut(s) 171
XagI CCTNNNNNAGG 1 cut(s) 1622
XapI RAATTY 2 cut(s) 626, 1306
XceI RCATGY 3 cut(s) 1475, 1707, 1877
XcmI CCANNNNNNNNNTGG 1 cut(s) 1427
XhoI CTCGAG 1 cut(s) 461
XmiI GTMKAC 2 cut(s) 177, 1458
XmnI GAANNNNTTC 1 cut(s) 819
XspI CTAG 4 cut(s) 417, 521, 1074, 1683
ZrmI AGTACT 4 cut(s) 779, 846, 1081, 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.