histone acetyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g00740 |
| pyrus_communis | pycom09g00930 |
| rosa_chinensis | RchiOBHm_Chr3g0448221 |
| rosa_laevigata | RLG00000025936 |
| rosa_multiflora | Rmu_co8052802.1_g000001 Rmu_sc0005969.1_g000037 Rmu_sc0005969.1_g000043 |
| rosa_rugosa | Rorug02G0609000 |
| rosa_samantha | Rh3BG008500 Rh3CG008600 Rh3DG009200 |
| rosa_wichuraiana | Rw3G000720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 200 |
| Acc36I | ACCTGC | 1 cut(s) | 1411 |
| Acc65I | GGTACC | 1 cut(s) | 1608 |
| AccB1I | GGYRCC | 2 cut(s) | 1071, 1608 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 530, 2485 |
| AccI | GTMKAC | 4 cut(s) | 180, 513, 581, 2076 |
| AccII | CGCG | 1 cut(s) | 2689 |
| AciI | CCGC | 8 cut(s) | 45, 65, 233, 585, 656, 871, 1506, 2687 |
| AclWI | GGATC | 2 cut(s) | 701, 1218 |
| AcoI | YGGCCR | 3 cut(s) | 145, 688, 2335 |
| AcsI | RAATTY | 3 cut(s) | 977, 1241, 1924 |
| AcuI | CTGAAG | 5 cut(s) | 279, 462, 1381, 1791, 2463 |
| AflIII | ACRYGT | 1 cut(s) | 2089 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1756 |
| AhlI | ACTAGT | 2 cut(s) | 1031, 2300 |
| AjnI | CCWGG | 1 cut(s) | 2241 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 586, 618 |
| AleI | CACNNNNGTG | 1 cut(s) | 2025 |
| Alw21I | GWGCWC | 4 cut(s) | 552, 913, 990, 2097 |
| Alw26I | GTCTC | 5 cut(s) | 208, 426, 1081, 1799, 2423 |
| AlwI | GGATC | 2 cut(s) | 701, 1218 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1894 |
| Ama87I | CYCGRG | 2 cut(s) | 1076, 2100 |
| AoxI | GGCC | 7 cut(s) | 145, 280, 688, 1518, 2244, 2335, 2522 |
| ApoI | RAATTY | 3 cut(s) | 977, 1241, 1924 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1245, 1277 |
| AseI | ATTAAT | 1 cut(s) | 171 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1434 |
| Asp718I | GGTACC | 1 cut(s) | 1608 |
| AspLEI | GCGC | 1 cut(s) | 592 |
| AspS9I | GGNCC | 2 cut(s) | 1518, 2698 |
| AsuC2I | CCSGG | 1 cut(s) | 760 |
| AsuHPI | GGTGA | 4 cut(s) | 1760, 2012, 2116, 2385 |
| AsuII | TTCGAA | 1 cut(s) | 2654 |
| AvaI | CYCGRG | 2 cut(s) | 1076, 2100 |
| AvaII | GGWCC | 1 cut(s) | 2698 |
| AxyI | CCTNAGG | 2 cut(s) | 2702, 2823 |
| BalI | TGGCCA | 1 cut(s) | 2337 |
| BanI | GGYRCC | 2 cut(s) | 1071, 1608 |
| BbsI | GAAGAC | 2 cut(s) | 66, 1583 |
| Bbv12I | GWGCWC | 4 cut(s) | 552, 913, 990, 2097 |
| BceAI | ACGGC | 2 cut(s) | 160, 372 |
| BciT130I | CCWGG | 1 cut(s) | 2243 |
| BciVI | GTATCC | 1 cut(s) | 1463 |
| BclI | TGATCA | 4 cut(s) | 9, 1779, 2350, 2374 |
| BcnI | CCSGG | 1 cut(s) | 760 |
| BcoDI | GTCTC | 5 cut(s) | 208, 426, 1081, 1799, 2423 |
| BcuI | ACTAGT | 2 cut(s) | 1031, 2300 |
| BfaI | CTAG | 4 cut(s) | 1032, 1136, 1689, 2301 |
| BfmI | CTRYAG | 3 cut(s) | 715, 1404, 2662 |
| BfoI | RGCGCY | 1 cut(s) | 593 |
| BfuAI | ACCTGC | 1 cut(s) | 1411 |
| BfuI | GTATCC | 1 cut(s) | 1463 |
| BglII | AGATCT | 1 cut(s) | 1021 |
| BmcAI | AGTACT | 4 cut(s) | 507, 1394, 1696, 2112 |
| Bme1390I | CCNGG | 2 cut(s) | 760, 2243 |
| Bme18I | GGWCC | 1 cut(s) | 2698 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1756 |
| BmeT110I | CYCGRG | 2 cut(s) | 1076, 2100 |
| BmgT120I | GGNCC | 2 cut(s) | 1518, 2698 |
| BmiI | GGNNCC | 6 cut(s) | 360, 492, 861, 1073, 1610, 1864 |
| BmrFI | CCNGG | 2 cut(s) | 760, 2243 |
| BmrI | ACTGGG | 2 cut(s) | 1707, 1904 |
| BmsI | GCATC | 4 cut(s) | 438, 644, 1875, 1891 |
| BmuI | ACTGGG | 2 cut(s) | 1707, 1904 |
| BpiI | GAAGAC | 2 cut(s) | 66, 1583 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1316, 1348 |
| BpmI | CTGGAG | 2 cut(s) | 2138, 2625 |
| Bpu14I | TTCGAA | 1 cut(s) | 2654 |
| BpuEI | CTTGAG | 1 cut(s) | 1496 |
| BpuMI | CCSGG | 1 cut(s) | 760 |
| BsaJI | CCNNGG | 4 cut(s) | 863, 1257, 1713, 2397 |
| BsaWI | WCCGGW | 1 cut(s) | 638 |
| Bse118I | RCCGGY | 2 cut(s) | 147, 2520 |
| Bse1I | ACTGG | 8 cut(s) | 269, 1589, 1612, 1702, 1899, 1997, 2121, 2775 |
| Bse21I | CCTNAGG | 2 cut(s) | 2702, 2823 |
| BseBI | CCWGG | 1 cut(s) | 2243 |
| BseDI | CCNNGG | 4 cut(s) | 863, 1257, 1713, 2397 |
| BseGI | GGATG | 5 cut(s) | 10, 535, 635, 1561, 1906 |
| BseMII | CTCAG | 8 cut(s) | 560, 720, 1119, 1347, 2293, 2298, 2693, 2814 |
| BseNI | ACTGG | 8 cut(s) | 269, 1589, 1612, 1702, 1899, 1997, 2121, 2775 |
| BseRI | GAGGAG | 4 cut(s) | 503, 872, 1814, 1817 |
| BseX3I | CGGCCG | 1 cut(s) | 145 |
| BseYI | CCCAGC | 1 cut(s) | 2828 |
| BsgI | GTGCAG | 4 cut(s) | 248, 1340, 2277, 2608 |
| Bsh1236I | CGCG | 1 cut(s) | 2689 |
| Bsh1285I | CGRYCG | 2 cut(s) | 49, 148 |
| BshFI | GGCC | 7 cut(s) | 147, 282, 690, 1520, 2246, 2337, 2524 |
| BshNI | GGYRCC | 2 cut(s) | 1071, 1608 |
| BsiEI | CGRYCG | 2 cut(s) | 49, 148 |
| BsiHKAI | GWGCWC | 4 cut(s) | 552, 913, 990, 2097 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1076, 2100 |
| BsiSI | CCGG | 5 cut(s) | 148, 639, 691, 760, 2521 |
| BslFI | GGGAC | 2 cut(s) | 1854, 2755 |
| BsmAI | GTCTC | 5 cut(s) | 208, 426, 1081, 1799, 2423 |
| BsmBI | CGTCTC | 1 cut(s) | 1081 |
| BsmFI | GGGAC | 2 cut(s) | 1854, 2755 |
| BsmI | GAATGC | 3 cut(s) | 1709, 2650, 2840 |
| BsnI | GGCC | 7 cut(s) | 147, 282, 690, 1520, 2246, 2337, 2524 |
| BsoBI | CYCGRG | 2 cut(s) | 1076, 2100 |
| Bsp119I | TTCGAA | 1 cut(s) | 2654 |
| Bsp1286I | GDGCHC | 4 cut(s) | 552, 913, 990, 2097 |
| Bsp1407I | TGTACA | 1 cut(s) | 252 |
| Bsp19I | CCATGG | 1 cut(s) | 863 |
| BspACI | CCGC | 8 cut(s) | 45, 65, 233, 585, 656, 871, 1506, 2687 |
| BspANI | GGCC | 7 cut(s) | 147, 282, 690, 1520, 2246, 2337, 2524 |
| BspCNI | CTCAG | 8 cut(s) | 561, 721, 1120, 1346, 2292, 2299, 2694, 2815 |
| BspFNI | CGCG | 1 cut(s) | 2689 |
| BspHI | TCATGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 6 cut(s) | 360, 492, 861, 1073, 1610, 1864 |
| BspMAI | CTGCAG | 1 cut(s) | 1408 |
| BspMI | ACCTGC | 1 cut(s) | 1411 |
| BspPI | GGATC | 2 cut(s) | 701, 1218 |
| BspQI | GCTCTTC | 2 cut(s) | 540, 1440 |
| BspT104I | TTCGAA | 1 cut(s) | 2654 |
| BspT107I | GGYRCC | 2 cut(s) | 1071, 1608 |
| BsrFI | RCCGGY | 2 cut(s) | 147, 2520 |
| BsrGI | TGTACA | 1 cut(s) | 252 |
| BsrI | ACTGG | 8 cut(s) | 269, 1589, 1612, 1702, 1899, 1997, 2121, 2775 |
| BssAI | RCCGGY | 2 cut(s) | 147, 2520 |
| BssECI | CCNNGG | 4 cut(s) | 863, 1257, 1713, 2397 |
| BssT1I | CCWWGG | 3 cut(s) | 863, 1257, 1713 |
| Bst2UI | CCWGG | 1 cut(s) | 2243 |
| Bst4CI | ACNGT | 9 cut(s) | 72, 289, 674, 683, 1186, 2074, 2401, 2663, 2814 |
| Bst6I | CTCTTC | 3 cut(s) | 294, 540, 1440 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 226, 1962 |
| BstAUI | TGTACA | 1 cut(s) | 252 |
| BstBI | TTCGAA | 1 cut(s) | 2654 |
| BstC8I | GCNNGC | 2 cut(s) | 315, 1522 |
| BstDEI | CTNAG | 9 cut(s) | 569, 729, 1040, 1128, 1333, 2279, 2307, 2702, 2823 |
| BstDSI | CCRYGG | 2 cut(s) | 863, 2397 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2240 |
| BstF5I | GGATG | 5 cut(s) | 10, 535, 635, 1561, 1906 |
| BstFNI | CGCG | 1 cut(s) | 2689 |
| BstH2I | RGCGCY | 1 cut(s) | 593 |
| BstHHI | GCGC | 1 cut(s) | 592 |
| BstMAI | GTCTC | 5 cut(s) | 208, 426, 1081, 1799, 2423 |
| BstMCI | CGRYCG | 2 cut(s) | 49, 148 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 226, 827, 868, 1594, 1962, 2334 |
| BstNI | CCWGG | 1 cut(s) | 2243 |
| BstNSI | RCATGY | 4 cut(s) | 2065, 2093, 2325, 2495 |
| BstSCI | CCNGG | 2 cut(s) | 758, 2241 |
| BstSFI | CTRYAG | 3 cut(s) | 715, 1404, 2662 |
| BstUI | CGCG | 1 cut(s) | 2689 |
| BstV2I | GAAGAC | 2 cut(s) | 66, 1583 |
| BstX2I | RGATCY | 2 cut(s) | 1021, 1210 |
| BstYI | RGATCY | 2 cut(s) | 1021, 1210 |
| BstZI | CGGCCG | 1 cut(s) | 145 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2702, 2823 |
| BsuI | GTATCC | 1 cut(s) | 1463 |
| BsuRI | GGCC | 7 cut(s) | 147, 282, 690, 1520, 2246, 2337, 2524 |
| BtgI | CCRYGG | 2 cut(s) | 863, 2397 |
| BtgZI | GCGATG | 1 cut(s) | 1850 |
| BtsCI | GGATG | 5 cut(s) | 10, 535, 635, 1561, 1906 |
| BtsI | GCAGTG | 3 cut(s) | 352, 419, 2596 |
| BveI | ACCTGC | 1 cut(s) | 1411 |
| Cac8I | GCNNGC | 2 cut(s) | 315, 1522 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1894 |
| CciI | TCATGA | 1 cut(s) | 153 |
| CfoI | GCGC | 1 cut(s) | 592 |
| Cfr10I | RCCGGY | 2 cut(s) | 147, 2520 |
| Cfr13I | GGNCC | 2 cut(s) | 1518, 2698 |
| DdeI | CTNAG | 9 cut(s) | 569, 729, 1040, 1128, 1333, 2279, 2307, 2702, 2823 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 200 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1756 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 200 |
| EaeI | YGGCCR | 3 cut(s) | 145, 688, 2335 |
| EagI | CGGCCG | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 3 cut(s) | 294, 540, 1440 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1756 |
| EarI | CTCTTC | 3 cut(s) | 294, 540, 1440 |
| EclXI | CGGCCG | 1 cut(s) | 145 |
| Eco130I | CCWWGG | 3 cut(s) | 863, 1257, 1713 |
| Eco147I | AGGCCT | 1 cut(s) | 282 |
| Eco32I | GATATC | 2 cut(s) | 790, 805 |
| Eco47I | GGWCC | 1 cut(s) | 2698 |
| Eco52I | CGGCCG | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 5 cut(s) | 279, 462, 1381, 1791, 2463 |
| Eco81I | CCTNAGG | 2 cut(s) | 2702, 2823 |
| Eco88I | CYCGRG | 2 cut(s) | 1076, 2100 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2240 |
| EcoRI | GAATTC | 2 cut(s) | 977, 1241 |
| EcoRII | CCWGG | 1 cut(s) | 2241 |
| EcoRV | GATATC | 2 cut(s) | 790, 805 |
| EcoT14I | CCWWGG | 3 cut(s) | 863, 1257, 1713 |
| EcoT22I | ATGCAT | 1 cut(s) | 600 |
| ErhI | CCWWGG | 3 cut(s) | 863, 1257, 1713 |
| Esp3I | CGTCTC | 1 cut(s) | 1081 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 384, 416, 1568, 1600, 1863, 1895, 2176, 2208 |
| FaqI | GGGAC | 2 cut(s) | 1854, 2755 |
| FauI | CCCGC | 1 cut(s) | 72 |
| FauNDI | CATATG | 1 cut(s) | 1514 |
| FbaI | TGATCA | 4 cut(s) | 9, 1779, 2350, 2374 |
| FblI | GTMKAC | 4 cut(s) | 180, 513, 581, 2076 |
| FokI | GGATG | 5 cut(s) | 17, 542, 622, 1548, 1913 |
| FspBI | CTAG | 4 cut(s) | 1032, 1136, 1689, 2301 |
| GlaI | GCGC | 1 cut(s) | 591 |
| GsaI | CCCAGC | 1 cut(s) | 2832 |
| GsuI | CTGGAG | 2 cut(s) | 2138, 2625 |
| HaeII | RGCGCY | 1 cut(s) | 593 |
| HaeIII | GGCC | 7 cut(s) | 147, 282, 690, 1520, 2246, 2337, 2524 |
| HapII | CCGG | 5 cut(s) | 148, 639, 691, 760, 2521 |
| HhaI | GCGC | 1 cut(s) | 592 |
| Hin6I | GCGC | 1 cut(s) | 590 |
| HinP1I | GCGC | 1 cut(s) | 590 |
| HincII | GTYRAC | 5 cut(s) | 142, 181, 514, 540, 2077 |
| HindII | GTYRAC | 5 cut(s) | 142, 181, 514, 540, 2077 |
| HpaI | GTTAAC | 2 cut(s) | 142, 540 |
| HpaII | CCGG | 5 cut(s) | 148, 639, 691, 760, 2521 |
| HphI | GGTGA | 4 cut(s) | 1760, 2012, 2116, 2385 |
| Hpy99I | CGWCG | 2 cut(s) | 185, 518 |
| HpyAV | CCTTC | 8 cut(s) | 373, 389, 1086, 1092, 1139, 1539, 1634, 2438 |
| HpyCH4III | ACNGT | 9 cut(s) | 72, 289, 674, 683, 1186, 2074, 2401, 2663, 2814 |
| HpyCH4IV | ACGT | 1 cut(s) | 183 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 226, 827, 868, 1594, 1962, 2334 |
| HpyF3I | CTNAG | 9 cut(s) | 569, 729, 1040, 1128, 1333, 2279, 2307, 2702, 2823 |
| HpySE526I | ACGT | 1 cut(s) | 183 |
| HspAI | GCGC | 1 cut(s) | 590 |
| KpnI | GGTACC | 1 cut(s) | 1612 |
| Ksp22I | TGATCA | 4 cut(s) | 9, 1779, 2350, 2374 |
| KspAI | GTTAAC | 2 cut(s) | 142, 540 |
| LguI | GCTCTTC | 2 cut(s) | 540, 1440 |
| LmnI | GCTCC | 4 cut(s) | 364, 490, 859, 2481 |
| LweI | GCATC | 4 cut(s) | 438, 644, 1875, 1891 |
| MaeI | CTAG | 4 cut(s) | 1032, 1136, 1689, 2301 |
| MaeII | ACGT | 1 cut(s) | 183 |
| MaeIII | GTNAC | 8 cut(s) | 303, 1043, 1229, 1420, 1717, 1748, 2410, 2504 |
| MflI | RGATCY | 2 cut(s) | 1021, 1210 |
| MhlI | GDGCHC | 4 cut(s) | 552, 913, 990, 2097 |
| MlsI | TGGCCA | 1 cut(s) | 2337 |
| MluCI | AATT | 8 cut(s) | 852, 977, 1241, 1812, 1924, 2225, 2556, 2674 |
| MluNI | TGGCCA | 1 cut(s) | 2337 |
| MlyI | GAGTC | 6 cut(s) | 311, 428, 580, 655, 1056, 2461 |
| MmeI | TCCRAC | 2 cut(s) | 29, 2466 |
| Mox20I | TGGCCA | 1 cut(s) | 2337 |
| Mph1103I | ATGCAT | 1 cut(s) | 600 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1434 |
| MscI | TGGCCA | 1 cut(s) | 2337 |
| MseI | TTAA | 6 cut(s) | 141, 171, 539, 1593, 1910, 2559 |
| MslI | CAYNNNNRTG | 8 cut(s) | 555, 1268, 1743, 1848, 2025, 2066, 2280, 2768 |
| Msp20I | TGGCCA | 1 cut(s) | 2337 |
| MspI | CCGG | 5 cut(s) | 148, 639, 691, 760, 2521 |
| MspR9I | CCNGG | 2 cut(s) | 760, 2243 |
| Mva1269I | GAATGC | 3 cut(s) | 1709, 2650, 2840 |
| MvaI | CCWGG | 1 cut(s) | 2243 |
| MvnI | CGCG | 1 cut(s) | 2689 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 226, 827, 868, 1594, 1962, 2334 |
| NciI | CCSGG | 1 cut(s) | 760 |
| NcoI | CCATGG | 1 cut(s) | 863 |
| NdeI | CATATG | 1 cut(s) | 1514 |
| NlaIV | GGNNCC | 6 cut(s) | 360, 492, 861, 1073, 1610, 1864 |
| NmuCI | GTSAC | 6 cut(s) | 303, 1043, 1420, 1717, 1748, 2410 |
| NsiI | ATGCAT | 1 cut(s) | 600 |
| NspI | RCATGY | 4 cut(s) | 2065, 2093, 2325, 2495 |
| NspV | TTCGAA | 1 cut(s) | 2654 |
| OliI | CACNNNNGTG | 1 cut(s) | 2025 |
| PaeR7I | CTCGAG | 1 cut(s) | 1076 |
| PagI | TCATGA | 1 cut(s) | 153 |
| PceI | AGGCCT | 1 cut(s) | 282 |
| PciI | ACATGT | 1 cut(s) | 2089 |
| PciSI | GCTCTTC | 2 cut(s) | 540, 1440 |
| PctI | GAATGC | 3 cut(s) | 1709, 2650, 2840 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1434 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 530, 2485 |
| PleI | GAGTC | 6 cut(s) | 310, 427, 579, 655, 1056, 2460 |
| PpsI | GAGTC | 6 cut(s) | 310, 427, 579, 655, 1056, 2460 |
| PscI | ACATGT | 1 cut(s) | 2089 |
| PshBI | ATTAAT | 1 cut(s) | 171 |
| Psp6I | CCWGG | 1 cut(s) | 2241 |
| PspFI | CCCAGC | 1 cut(s) | 2828 |
| PspGI | CCWGG | 1 cut(s) | 2241 |
| PspN4I | GGNNCC | 6 cut(s) | 360, 492, 861, 1073, 1610, 1864 |
| PspPI | GGNCC | 2 cut(s) | 1518, 2698 |
| PspXI | VCTCGAGB | 1 cut(s) | 1076 |
| PstI | CTGCAG | 1 cut(s) | 1408 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1894 |
| PsuI | RGATCY | 2 cut(s) | 1021, 1210 |
| RseI | CAYNNNNRTG | 8 cut(s) | 555, 1268, 1743, 1848, 2025, 2066, 2280, 2768 |
| SalI | GTCGAC | 3 cut(s) | 179, 512, 2075 |
| SapI | GCTCTTC | 2 cut(s) | 540, 1440 |
| SaqAI | TTAA | 6 cut(s) | 141, 171, 539, 1593, 1910, 2559 |
| Sau96I | GGNCC | 2 cut(s) | 1518, 2698 |
| ScaI | AGTACT | 4 cut(s) | 507, 1394, 1696, 2112 |
| SchI | GAGTC | 6 cut(s) | 311, 428, 580, 655, 1056, 2461 |
| ScrFI | CCNGG | 2 cut(s) | 760, 2243 |
| SduI | GDGCHC | 4 cut(s) | 552, 913, 990, 2097 |
| SfaNI | GCATC | 4 cut(s) | 438, 644, 1875, 1891 |
| SfcI | CTRYAG | 3 cut(s) | 715, 1404, 2662 |
| Sfr274I | CTCGAG | 1 cut(s) | 1076 |
| SfuI | TTCGAA | 1 cut(s) | 2654 |
| SinI | GGWCC | 1 cut(s) | 2698 |
| SlaI | CTCGAG | 1 cut(s) | 1076 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 555, 1268, 1743, 1848, 2025, 2066, 2280, 2768 |
| SmlI | CTYRAG | 2 cut(s) | 1076, 1475 |
| SmoI | CTYRAG | 2 cut(s) | 1076, 1475 |
| SpeI | ACTAGT | 2 cut(s) | 1031, 2300 |
| Sse9I | AATT | 8 cut(s) | 852, 977, 1241, 1812, 1924, 2225, 2556, 2674 |
| SseBI | AGGCCT | 1 cut(s) | 282 |
| SsiI | CCGC | 8 cut(s) | 45, 65, 233, 585, 656, 871, 1506, 2687 |
| SspMI | CTAG | 4 cut(s) | 1032, 1136, 1689, 2301 |
| StuI | AGGCCT | 1 cut(s) | 282 |
| StyD4I | CCNGG | 2 cut(s) | 758, 2241 |
| StyI | CCWWGG | 3 cut(s) | 863, 1257, 1713 |
| TaaI | ACNGT | 9 cut(s) | 72, 289, 674, 683, 1186, 2074, 2401, 2663, 2814 |
| TaiI | ACGT | 1 cut(s) | 186 |
| TasI | AATT | 8 cut(s) | 852, 977, 1241, 1812, 1924, 2225, 2556, 2674 |
| TatI | WGTACW | 8 cut(s) | 252, 505, 669, 1392, 1554, 1694, 2110, 2709 |
| TauI | GCSGC | 2 cut(s) | 235, 659 |
| Tru1I | TTAA | 6 cut(s) | 141, 171, 539, 1593, 1910, 2559 |
| Tru9I | TTAA | 6 cut(s) | 141, 171, 539, 1593, 1910, 2559 |
| TseFI | GTSAC | 6 cut(s) | 303, 1043, 1420, 1717, 1748, 2410 |
| Tsp45I | GTSAC | 6 cut(s) | 303, 1043, 1420, 1717, 1748, 2410 |
| TspDTI | ATGAA | 8 cut(s) | 18, 91, 142, 342, 1134, 1470, 1653, 1918 |
| TspGWI | ACGGA | 1 cut(s) | 285 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 530, 2485 |
| VpaK11BI | GGWCC | 1 cut(s) | 2698 |
| VspI | ATTAAT | 1 cut(s) | 171 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2240 |
| XapI | RAATTY | 3 cut(s) | 977, 1241, 1924 |
| XceI | RCATGY | 4 cut(s) | 2065, 2093, 2325, 2495 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2045 |
| XhoI | CTCGAG | 1 cut(s) | 1076 |
| XmiI | GTMKAC | 4 cut(s) | 180, 513, 581, 2076 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1434 |
| XspI | CTAG | 4 cut(s) | 1032, 1136, 1689, 2301 |
| ZrmI | AGTACT | 4 cut(s) | 507, 1394, 1696, 2112 |
| Zsp2I | ATGCAT | 1 cut(s) | 600 |