ADP-ribosylation factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34190 |
| fragaria_vesca | FvH4_2g05321 |
| malus_domestica | MD05G1088100.v1.1 |
| prunus_persica | Prupe.8G134100_v2.0.a1 |
| pyrus_communis | pycom05g08750 pycom10g08230 |
| rosa_chinensis | RchiOBHm_Chr6g0255531 |
| rosa_laevigata | RLG00000014833 |
| rosa_multiflora | Rmu_sc0006202.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00209910 |
| rosa_rugosa | Rorug05G0559200 |
| rosa_samantha | Rh6AG077700 Rh6CG068600 Rh6DG065400 |
| rosa_wichuraiana | Rw6G006690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 309, 429 |
| AcoI | YGGCCR | 1 cut(s) | 328 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AflIII | ACRYGT | 1 cut(s) | 236 |
| AgsI | TTSAA | 3 cut(s) | 16, 22, 181 |
| AluBI | AGCT | 2 cut(s) | 150, 359 |
| AluI | AGCT | 2 cut(s) | 150, 359 |
| Alw26I | GTCTC | 2 cut(s) | 109, 248 |
| AoxI | GGCC | 2 cut(s) | 201, 328 |
| ApeKI | GCWGC | 2 cut(s) | 356, 431 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| BanII | GRGCYC | 1 cut(s) | 411 |
| BbvI | GCAGC | 2 cut(s) | 368, 418 |
| BccI | CCATC | 2 cut(s) | 134, 334 |
| BceAI | ACGGC | 1 cut(s) | 216 |
| BcoDI | GTCTC | 2 cut(s) | 109, 248 |
| BfaI | CTAG | 1 cut(s) | 395 |
| BfmI | CTRYAG | 1 cut(s) | 354 |
| BisI | GCNGC | 2 cut(s) | 357, 432 |
| BlpI | GCTNAGC | 1 cut(s) | 151 |
| BlsI | GCNGC | 2 cut(s) | 358, 433 |
| BmrI | ACTGGG | 1 cut(s) | 204 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BmuI | ACTGGG | 1 cut(s) | 204 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 151 |
| BsaI | GGTCTC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 1 cut(s) | 300 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 8, 38, 202, 232 |
| Bse118I | RCCGGY | 1 cut(s) | 330 |
| Bse1I | ACTGG | 5 cut(s) | 156, 199, 217, 262, 484 |
| BseDI | CCNNGG | 1 cut(s) | 300 |
| BseGI | GGATG | 2 cut(s) | 322, 345 |
| BseMII | CTCAG | 3 cut(s) | 113, 132, 165 |
| BseNI | ACTGG | 5 cut(s) | 156, 199, 217, 262, 484 |
| BseRI | GAGGAG | 1 cut(s) | 210 |
| BseXI | GCAGC | 2 cut(s) | 368, 418 |
| BshFI | GGCC | 2 cut(s) | 203, 330 |
| BsiSI | CCGG | 1 cut(s) | 331 |
| BslFI | GGGAC | 3 cut(s) | 211, 402, 402 |
| BsmAI | GTCTC | 2 cut(s) | 109, 248 |
| BsmFI | GGGAC | 3 cut(s) | 211, 402, 402 |
| BsnI | GGCC | 2 cut(s) | 203, 330 |
| Bso31I | GGTCTC | 1 cut(s) | 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 411 |
| Bsp143I | GATC | 1 cut(s) | 263 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 151 |
| BspACI | CCGC | 2 cut(s) | 309, 429 |
| BspANI | GGCC | 2 cut(s) | 203, 330 |
| BspCNI | CTCAG | 3 cut(s) | 112, 131, 164 |
| BspMAI | CTGCAG | 1 cut(s) | 358 |
| BspTNI | GGTCTC | 1 cut(s) | 109 |
| BsrFI | RCCGGY | 1 cut(s) | 330 |
| BsrI | ACTGG | 5 cut(s) | 156, 199, 217, 262, 484 |
| BssAI | RCCGGY | 1 cut(s) | 330 |
| BssECI | CCNNGG | 1 cut(s) | 300 |
| BssMI | GATC | 1 cut(s) | 263 |
| BssT1I | CCWWGG | 1 cut(s) | 300 |
| BstC8I | GCNNGC | 1 cut(s) | 332 |
| BstDEI | CTNAG | 4 cut(s) | 99, 118, 151, 493 |
| BstF5I | GGATG | 2 cut(s) | 322, 345 |
| BstKTI | GATC | 1 cut(s) | 266 |
| BstMAI | GTCTC | 2 cut(s) | 109, 248 |
| BstMBI | GATC | 1 cut(s) | 263 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 331, 437, 446 |
| BstNSI | RCATGY | 1 cut(s) | 240 |
| BstSFI | CTRYAG | 1 cut(s) | 354 |
| BstV1I | GCAGC | 2 cut(s) | 368, 418 |
| BsuRI | GGCC | 2 cut(s) | 203, 330 |
| BtsCI | GGATG | 2 cut(s) | 322, 345 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| Cac8I | GCNNGC | 1 cut(s) | 332 |
| Cfr10I | RCCGGY | 1 cut(s) | 330 |
| CviAII | CATG | 1 cut(s) | 237 |
| DdeI | CTNAG | 4 cut(s) | 99, 118, 151, 493 |
| DpnI | GATC | 1 cut(s) | 265 |
| DpnII | GATC | 1 cut(s) | 263 |
| EaeI | YGGCCR | 1 cut(s) | 328 |
| Eco130I | CCWWGG | 1 cut(s) | 300 |
| Eco24I | GRGCYC | 1 cut(s) | 411 |
| Eco31I | GGTCTC | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 1 cut(s) | 300 |
| EcoT38I | GRGCYC | 1 cut(s) | 411 |
| ErhI | CCWWGG | 1 cut(s) | 300 |
| FaeI | CATG | 1 cut(s) | 240 |
| FaiI | YATR | 3 cut(s) | 238, 281, 322 |
| FaqI | GGGAC | 3 cut(s) | 211, 402, 402 |
| FatI | CATG | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 2 cut(s) | 357, 432 |
| FokI | GGATG | 2 cut(s) | 329, 352 |
| FriOI | GRGCYC | 1 cut(s) | 411 |
| Fsp4HI | GCNGC | 2 cut(s) | 357, 432 |
| FspBI | CTAG | 1 cut(s) | 395 |
| GluI | GCNGC | 2 cut(s) | 357, 432 |
| HaeIII | GGCC | 2 cut(s) | 203, 330 |
| HapII | CCGG | 1 cut(s) | 331 |
| Hin1II | CATG | 1 cut(s) | 240 |
| HpaII | CCGG | 1 cut(s) | 331 |
| Hpy188I | TCNGA | 2 cut(s) | 131, 496 |
| Hpy188III | TCNNGA | 3 cut(s) | 178, 370, 395 |
| HpyAV | CCTTC | 3 cut(s) | 22, 244, 379 |
| HpyCH4V | TGCA | 3 cut(s) | 137, 143, 356 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 331, 437, 446 |
| HpyF3I | CTNAG | 4 cut(s) | 99, 118, 151, 493 |
| Hsp92II | CATG | 1 cut(s) | 240 |
| KroI | GCCGGC | 1 cut(s) | 330 |
| KroNI | GCCGGC | 1 cut(s) | 332 |
| Kzo9I | GATC | 1 cut(s) | 263 |
| Lsp1109I | GCAGC | 2 cut(s) | 368, 418 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeI | CTAG | 1 cut(s) | 395 |
| MaeIII | GTNAC | 1 cut(s) | 442 |
| MalI | GATC | 1 cut(s) | 265 |
| MboI | GATC | 1 cut(s) | 263 |
| MboII | GAAGA | 2 cut(s) | 95, 273 |
| MhlI | GDGCHC | 1 cut(s) | 411 |
| MluCI | AATT | 4 cut(s) | 46, 144, 181, 499 |
| MnlI | CCTC | 3 cut(s) | 68, 231, 298 |
| MroNI | GCCGGC | 1 cut(s) | 330 |
| MseI | TTAA | 2 cut(s) | 464, 502 |
| MspA1I | CMGCKG | 1 cut(s) | 431 |
| MspI | CCGG | 1 cut(s) | 331 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 331, 437, 446 |
| NaeI | GCCGGC | 1 cut(s) | 332 |
| NdeII | GATC | 1 cut(s) | 263 |
| NgoMIV | GCCGGC | 1 cut(s) | 330 |
| NlaIII | CATG | 1 cut(s) | 240 |
| NspI | RCATGY | 1 cut(s) | 240 |
| PciI | ACATGT | 1 cut(s) | 236 |
| PdiI | GCCGGC | 1 cut(s) | 332 |
| PkrI | GCNGC | 2 cut(s) | 358, 433 |
| PscI | ACATGT | 1 cut(s) | 236 |
| PstI | CTGCAG | 1 cut(s) | 358 |
| SaqAI | TTAA | 2 cut(s) | 464, 502 |
| SatI | GCNGC | 2 cut(s) | 357, 432 |
| Sau3AI | GATC | 1 cut(s) | 263 |
| SduI | GDGCHC | 1 cut(s) | 411 |
| SetI | ASST | 5 cut(s) | 14, 38, 105, 152, 361 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SfcI | CTRYAG | 1 cut(s) | 354 |
| Sse9I | AATT | 4 cut(s) | 46, 144, 181, 499 |
| SsiI | CCGC | 2 cut(s) | 309, 429 |
| SspMI | CTAG | 1 cut(s) | 395 |
| StyI | CCWWGG | 1 cut(s) | 300 |
| TaqI | TCGA | 2 cut(s) | 60, 369 |
| TasI | AATT | 4 cut(s) | 46, 144, 181, 499 |
| Tru1I | TTAA | 2 cut(s) | 464, 502 |
| Tru9I | TTAA | 2 cut(s) | 464, 502 |
| TscAI | CASTG | 1 cut(s) | 126 |
| TseI | GCWGC | 2 cut(s) | 356, 431 |
| TspDTI | ATGAA | 1 cut(s) | 466 |
| TspRI | CASTG | 1 cut(s) | 126 |
| XapI | RAATTY | 1 cut(s) | 181 |
| XbaI | TCTAGA | 1 cut(s) | 394 |
| XceI | RCATGY | 1 cut(s) | 240 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 433 |
| XspI | CTAG | 1 cut(s) | 395 |