Rorug05G0559200

ADP-ribosylation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0016043
Physical Location & Seq
Forward (+)
74860116 .. 74866849
6734 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0559200.1

Sequence Viewer

Length: 2055 bp
ATGCGCCGAAACGACGACGTTCGCTTCATTTCCTTCCCTTCTCTCAAACTCCCCCACTCTCCTCCTCCGCCGCGATTCGACCTCCGCTCCCTCTTCTCCAACAACTCGCTGAGTCAACTCATCGACTCGATCAAGGCCCGCTCGCAACGGCCCCAGACCAGGTCCGCCGACTCGAATCGGCCGGTTCTGTGCTCGGCGACGCTGTCCCTGACTCGGTCCGGCGACTCGGCCGAGTCCAAGTCCGACCGGAGCTGGCTGGTCAGGAAGTCGCCGCTTCTGTGCTCGGCTTCGTTGTCGCTGAGTCGGTCCGACGAGTCGACTCGGTCTGGATCGGAGGAGAGGGTTCTGATAAGCGAGGTGCTGATAAGGAACAAGGACGGCGAGGAGTTGGAGAGGAAGGACCTGGAATTGGAGGCCTTGGGGGCACTCAAGGCTTGCCGAGCAAACTCGGCACTCACTGTGCGTGAGGTCCAGGAAGACGTGCATAGGATCATTGATAGTGGCTATTTCTGCCAATGTATGCCTGTGGCCATTGATACAAGGGATGGTATCAGATTGATCTTTCAGGTAAAACCGAACCAGGAATTCCAAGGGCTAGTATGTGAAGGGGCAAATGTTCTTCCTGCCAAGTTTCTTAAGGATGCATTTTATGATGGATATGGAAAAGTTATTAATCTTAAGCGTTTGAATGAAGTAATCACTTCCATCAATGATTGGTACATGGATCGGGGACTTTTTGCCATGGTTTCAGCTGTTGAGGTTCTATCAGGAGGTATTCTTAAGTTACAAGTTTCAGAAACTGAAGTCAATAACATCGCCATACGGTTCCTTGACAGGAAGACGGGTGAGCCAACTATCGGGAAGACAAAGCCAGAGACCATACTTCGCCAACTCACAACTAAAAAAGGACAGGTCTACAGTATGCTTCAAGGAAAGAGAGATGTGGAAACGGTATTGACTATGGGGCTTATGGAAGATGTTAGCATTATTCCCCAACCAGCAGACAGTGGTAAGGTTGATATTACAATGAACGTCGTTGAGCGGCCAAGTGGAGGTTTTTCTGCTGGTGGTGGTATATCAAGTGGAATAACAAGTGGCCCTCTGTCAGGACTCATTGGAAGCTTTGCCTATTCTCATAGAAATCTCTTTGGAAGAAACCAAAAGCTGCATGTTTCTTTAGAGAGGGGCCAGATAGACTCTTTATTTCGTATAAACTACTCAGATCCATGGATTTCAGGGGATGATATGAGGACGTCCCGGACAATAATGGTTCAGAATTCAAGGACCCCTGGCACACTTATCCATGGTAACCAACTTGATGGTAGCAACTTGACCATTGGTCGCATCTCGGCTGGTATTGATTACAGCCGTCCAATTAGGCCAAAGTGGAGCGGAACGGCTGGGCTTACCTTTCAGCATGCTGGTGCTCGTGATGAAAAAGGAAGTCCTATTATCAAGGATTTCTTCAGCAGTCCCCTAACTGCAAGTGGTAATAGCTATGATGATATGCTGCTTGCTAAACTTGAGACTGTCTACACAGGTTCTGGTGACAGTGGGTCTTCAATGTTGAAATTCAACATGGAACAAGGACTTCCAGTTTTGCCTGATTGGTTGTTTTTCAACAGAATGAACGCTCGTGCCAGGAAAGATCTAGAAATTGGCCCTACTCACCTTCTTTTTAGCGTATCTGGTGGCCATGTGGTTGGTAACTTCCCACCACATGAAGCATTTGTCATTGGTGGAACAAATAGTGTAAGAGGTTATGAAGAGGGTGCTGTGGGTTCTGGTAGATCATATGCAGTTGGCTCTGGAGAAATTTCTTTCCCCCTGTTGGGGCCAGTTGGGGGAGTTATTTTTGCTGACTATGGCACAGATCTTGCATCAGGTCCAACCGTTCCTGGTGATCCTGCGGGAGCAAGGCTGAAGCCTGGAAGTGGGTATGGATATGGGTTGGGCATCAGATTGGACTCACCTTTGGGACCGCTTCGTCTTGAATATGCATTTAACGATAAGGGTACACCGAGATTTCACTTTGGGGTCGGACACCGGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko05110 ko05134 map04072 map04144 map05110 map05134
Pfam Domains
Protein Families
Arf

Protein Analysis

684

Amino Acids

74.41

Weight (kDa)

8.68

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Omp85 PF01103 381 - 683 1.1e-60 Omp85 superfamily domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34190
fragaria_vesca FvH4_2g05321
malus_domestica MD05G1088100.v1.1
prunus_persica Prupe.8G134100_v2.0.a1
pyrus_communis pycom05g08750 pycom10g08230
rosa_chinensis RchiOBHm_Chr6g0255531
rosa_laevigata RLG00000014833
rosa_multiflora Rmu_sc0006202.1_g000006
rosa_roxburghii Rroxscaffold_7G00209910
rosa_rugosa Rorug05G0559200
rosa_samantha Rh6AG077700 Rh6CG068600 Rh6DG065400
rosa_wichuraiana Rw6G006690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1986
AatII GACGTC 1 cut(s) 1256
AccBSI CCGCTC 4 cut(s) 87, 141, 1042, 1392
AccI GTMKAC 3 cut(s) 317, 915, 1533
AccII CGCG 1 cut(s) 73
AclWI GGATC 5 cut(s) 337, 497, 732, 1217, 1898
AcoI YGGCCR 5 cut(s) 179, 228, 528, 1043, 1693
AcsI RAATTY 4 cut(s) 584, 1276, 1571, 1815
AcuI CTGAAG 3 cut(s) 822, 1450, 1943
AcyI GRCGYC 1 cut(s) 1253
AfaI GTAC 2 cut(s) 719, 2017
AflII CTTAAG 3 cut(s) 635, 677, 779
AgsI TTSAA 8 cut(s) 688, 929, 1281, 1563, 1570, 1576, 1621, 1994
AhdI GACNNNNNGTC 2 cut(s) 1338, 1555
AjiI CACGTC 1 cut(s) 481
AjnI CCWGG 8 cut(s) 158, 402, 471, 579, 1288, 1640, 1897, 1927
AluBI AGCT 5 cut(s) 252, 752, 1122, 1165, 1497
AluI AGCT 5 cut(s) 252, 752, 1122, 1165, 1497
Alw21I GWGCWC 3 cut(s) 194, 284, 1429
Alw26I GTCTC 2 cut(s) 869, 1520
AlwI GGATC 5 cut(s) 337, 497, 732, 1217, 1898
AlwNI CAGNNNCTG 2 cut(s) 800, 1544
ApeKI GCWGC 2 cut(s) 1165, 1510
ApoI RAATTY 4 cut(s) 584, 1276, 1571, 1815
AseI ATTAAT 1 cut(s) 672
AspLEI GCGC 1 cut(s) 6
AsuC2I CCSGG 1 cut(s) 1258
AsuHPI GGTGA 5 cut(s) 857, 1559, 1661, 1913, 1962
AvaII GGWCC 8 cut(s) 162, 216, 306, 400, 469, 1284, 1886, 1979
BaeGI GKGCMC 1 cut(s) 427
BalI TGGCCA 2 cut(s) 530, 1695
BauI CACGAG 2 cut(s) 1428, 1635
BbsI GAAGAC 4 cut(s) 483, 845, 869, 1551
Bbv12I GWGCWC 3 cut(s) 194, 284, 1429
BbvI GCAGC 2 cut(s) 1152, 1497
BccI CCATC 4 cut(s) 539, 647, 713, 1313
BceAI ACGGC 4 cut(s) 164, 394, 1353, 1413
BciT130I CCWGG 8 cut(s) 160, 404, 473, 581, 1290, 1642, 1899, 1929
BcnI CCSGG 1 cut(s) 1258
BcoDI GTCTC 2 cut(s) 869, 1520
BfaI CTAG 3 cut(s) 596, 1652, 2053
BfmI CTRYAG 1 cut(s) 916
BfrI CTTAAG 3 cut(s) 635, 677, 779
BglI GCCNNNNNGGC 1 cut(s) 422
BglII AGATCT 2 cut(s) 1648, 1873
BisI GCNGC 5 cut(s) 71, 272, 1043, 1166, 1511
BlsI GCNGC 5 cut(s) 72, 273, 1044, 1167, 1512
Bme1390I CCNGG 9 cut(s) 160, 404, 473, 581, 1258, 1290, 1642, 1899, 1929
Bme18I GGWCC 8 cut(s) 162, 216, 306, 400, 469, 1284, 1886, 1979
BmeRI GACNNNNNGTC 2 cut(s) 1338, 1555
BmgBI CACGTC 1 cut(s) 481
BmiI GGNNCC 6 cut(s) 152, 827, 1187, 1286, 1836, 1980
BmrFI CCNGG 9 cut(s) 160, 404, 473, 581, 1258, 1290, 1642, 1899, 1929
BmsI GCATC 4 cut(s) 631, 1353, 1889, 1965
BpiI GAAGAC 4 cut(s) 483, 845, 869, 1551
BpmI CTGGAG 1 cut(s) 1830
BpuEI CTTGAG 2 cut(s) 413, 1544
BpuMI CCSGG 1 cut(s) 1258
BsaHI GRCGYC 1 cut(s) 1253
BsaI GGTCTC 1 cut(s) 869
BsaJI CCNNGG 6 cut(s) 417, 589, 741, 1226, 1288, 1303
BsaWI WCCGGW 2 cut(s) 246, 2046
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bse118I RCCGGY 1 cut(s) 181
Bse1I ACTGG 2 cut(s) 1595, 1838
BseBI CCWGG 8 cut(s) 160, 404, 473, 581, 1290, 1642, 1899, 1929
BseDI CCNNGG 6 cut(s) 417, 589, 741, 1226, 1288, 1303
BseGI GGATG 3 cut(s) 550, 646, 1246
BseMII CTCAG 3 cut(s) 101, 290, 1233
BseNI ACTGG 2 cut(s) 1595, 1838
BseRI GAGGAG 4 cut(s) 51, 54, 350, 398
BseSI GKGCMC 1 cut(s) 427
BseX3I CGGCCG 2 cut(s) 179, 228
BseXI GCAGC 2 cut(s) 1152, 1497
BseYI CCCAGC 1 cut(s) 1400
Bsh1236I CGCG 1 cut(s) 73
Bsh1285I CGRYCG 3 cut(s) 182, 231, 247
BsiEI CGRYCG 3 cut(s) 182, 231, 247
BsiHKAI GWGCWC 3 cut(s) 194, 284, 1429
BsiSI CCGG 5 cut(s) 182, 219, 247, 1258, 2047
BslFI GGGAC 5 cut(s) 190, 744, 1240, 1458, 1992
BsmAI GTCTC 2 cut(s) 869, 1520
BsmFI GGGAC 5 cut(s) 190, 744, 1240, 1458, 1992
Bso31I GGTCTC 1 cut(s) 869
Bsp1286I GDGCHC 4 cut(s) 194, 284, 427, 1429
Bsp19I CCATGG 3 cut(s) 741, 1226, 1303
BspCNI CTCAG 3 cut(s) 102, 291, 1232
BspFNI CGCG 1 cut(s) 73
BspLI GGNNCC 6 cut(s) 152, 827, 1187, 1286, 1836, 1980
BspPI GGATC 5 cut(s) 337, 497, 732, 1217, 1898
BspTI CTTAAG 3 cut(s) 635, 677, 779
BspTNI GGTCTC 1 cut(s) 869
BsrBI CCGCTC 4 cut(s) 87, 141, 1042, 1392
BsrFI RCCGGY 1 cut(s) 181
BsrI ACTGG 2 cut(s) 1595, 1838
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 6 cut(s) 417, 589, 741, 1226, 1288, 1303
BssNI GRCGYC 1 cut(s) 1253
BssSI CACGAG 2 cut(s) 1428, 1635
BssT1I CCWWGG 5 cut(s) 417, 589, 741, 1226, 1303
Bst2BI CACGAG 2 cut(s) 1428, 1635
Bst2UI CCWGG 8 cut(s) 160, 404, 473, 581, 1290, 1642, 1899, 1929
Bst4CI ACNGT 8 cut(s) 460, 825, 920, 952, 1007, 1531, 1553, 1894
Bst6I CTCTTC 2 cut(s) 98, 1761
BstACI GRCGYC 1 cut(s) 1253
BstAFI CTTAAG 3 cut(s) 635, 677, 779
BstC8I GCNNGC 6 cut(s) 139, 143, 254, 436, 1419, 1515
BstDEI CTNAG 3 cut(s) 110, 299, 1219
BstDSI CCRYGG 3 cut(s) 741, 1226, 1303
BstEII GGTNACC 1 cut(s) 1307
BstENI CCTNNNNNAGG 1 cut(s) 1104
BstF5I GGATG 3 cut(s) 550, 646, 1246
BstFNI CGCG 1 cut(s) 73
BstHHI GCGC 1 cut(s) 6
BstMAI GTCTC 2 cut(s) 869, 1520
BstMCI CGRYCG 3 cut(s) 182, 231, 247
BstMWI GCNNNNNNNGC 5 cut(s) 422, 431, 440, 449, 510
BstNI CCWGG 8 cut(s) 160, 404, 473, 581, 1290, 1642, 1899, 1929
BstNSI RCATGY 2 cut(s) 1172, 1421
BstPI GGTNACC 1 cut(s) 1307
BstSCI CCNGG 9 cut(s) 158, 402, 471, 579, 1256, 1288, 1640, 1897, 1927
BstSFI CTRYAG 1 cut(s) 916
BstSLI GKGCMC 1 cut(s) 427
BstUI CGCG 1 cut(s) 73
BstV1I GCAGC 2 cut(s) 1152, 1497
BstV2I GAAGAC 4 cut(s) 483, 845, 869, 1551
BstX2I RGATCY 3 cut(s) 1222, 1648, 1873
BstXI CCANNNNNNTGG 2 cut(s) 1319, 1703
BstYI RGATCY 3 cut(s) 1222, 1648, 1873
BstZI CGGCCG 2 cut(s) 179, 228
BtgI CCRYGG 3 cut(s) 741, 1226, 1303
BtgZI GCGATG 1 cut(s) 799
BtrI CACGTC 1 cut(s) 481
BtsCI GGATG 3 cut(s) 550, 646, 1246
BtsIMutI CAGTG 3 cut(s) 456, 1012, 1558
Cac8I GCNNGC 6 cut(s) 139, 143, 254, 436, 1419, 1515
CaiI CAGNNNCTG 2 cut(s) 800, 1544
CfoI GCGC 1 cut(s) 6
Cfr10I RCCGGY 1 cut(s) 181
CpoI CGGWCCG 2 cut(s) 216, 306
CseI GACGC 1 cut(s) 208
CsiI ACCWGGT 1 cut(s) 158
Csp6I GTAC 2 cut(s) 718, 2016
CspI CGGWCCG 2 cut(s) 216, 306
CviAII CATG 9 cut(s) 721, 742, 1169, 1227, 1304, 1418, 1579, 1697, 1721
CviQI GTAC 2 cut(s) 718, 2016
DdeI CTNAG 3 cut(s) 110, 299, 1219
DrdI GACNNNNNNGTC 1 cut(s) 1986
DriI GACNNNNNGTC 2 cut(s) 1338, 1555
DseDI GACNNNNNNGTC 1 cut(s) 1986
EaeI YGGCCR 5 cut(s) 179, 228, 528, 1043, 1693
EagI CGGCCG 2 cut(s) 179, 228
Eam1104I CTCTTC 2 cut(s) 98, 1761
Eam1105I GACNNNNNGTC 2 cut(s) 1338, 1555
EarI CTCTTC 2 cut(s) 98, 1761
EciI GGCGGA 2 cut(s) 57, 154
EclXI CGGCCG 2 cut(s) 179, 228
Eco130I CCWWGG 5 cut(s) 417, 589, 741, 1226, 1303
Eco147I AGGCCT 1 cut(s) 416
Eco31I GGTCTC 1 cut(s) 869
Eco47I GGWCC 8 cut(s) 162, 216, 306, 400, 469, 1284, 1886, 1979
Eco52I CGGCCG 2 cut(s) 179, 228
Eco57I CTGAAG 3 cut(s) 822, 1450, 1943
Eco91I GGTNACC 1 cut(s) 1307
EcoNI CCTNNNNNAGG 1 cut(s) 1104
EcoO109I RGGNCCY 2 cut(s) 400, 1284
EcoO65I GGTNACC 1 cut(s) 1307
EcoRI GAATTC 2 cut(s) 584, 1276
EcoRII CCWGG 8 cut(s) 158, 402, 471, 579, 1288, 1640, 1897, 1927
EcoT14I CCWWGG 5 cut(s) 417, 589, 741, 1226, 1303
EcoT22I ATGCAT 2 cut(s) 646, 2002
ErhI CCWWGG 5 cut(s) 417, 589, 741, 1226, 1303
FaeI CATG 9 cut(s) 724, 745, 1172, 1230, 1307, 1421, 1582, 1700, 1724
FalI AAGNNNNNCTT 2 cut(s) 1448, 1480
FaqI GGGAC 5 cut(s) 190, 744, 1240, 1458, 1992
FatI CATG 9 cut(s) 720, 741, 1168, 1226, 1303, 1417, 1578, 1696, 1720
FauI CCCGC 2 cut(s) 146, 1903
FauNDI CATATG 1 cut(s) 1795
FblI GTMKAC 3 cut(s) 317, 915, 1533
Fnu4HI GCNGC 5 cut(s) 71, 272, 1043, 1166, 1511
FokI GGATG 3 cut(s) 557, 653, 1253
Fsp4HI GCNGC 5 cut(s) 71, 272, 1043, 1166, 1511
FspBI CTAG 3 cut(s) 596, 1652, 2053
GlaI GCGC 1 cut(s) 5
GluI GCNGC 5 cut(s) 71, 272, 1043, 1166, 1511
GsaI CCCAGC 1 cut(s) 1404
GsuI CTGGAG 1 cut(s) 1830
HapII CCGG 5 cut(s) 182, 219, 247, 1258, 2047
HgaI GACGC 1 cut(s) 208
HhaI GCGC 1 cut(s) 6
Hin1I GRCGYC 1 cut(s) 1253
Hin1II CATG 9 cut(s) 724, 745, 1172, 1230, 1307, 1421, 1582, 1700, 1724
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HincII GTYRAC 2 cut(s) 116, 318
HindII GTYRAC 2 cut(s) 116, 318
HindIII AAGCTT 1 cut(s) 1120
HpaII CCGG 5 cut(s) 182, 219, 247, 1258, 2047
HphI GGTGA 5 cut(s) 857, 1559, 1661, 1913, 1962
Hpy166II GTNNAC 5 cut(s) 116, 318, 916, 1534, 2018
Hpy188III TCNNGA 9 cut(s) 262, 327, 768, 859, 1107, 1430, 1652, 1809, 1991
Hpy8I GTNNAC 5 cut(s) 116, 318, 916, 1534, 2018
Hpy99I CGWCG 5 cut(s) 17, 20, 202, 314, 1037
HpyAV CCTTC 5 cut(s) 43, 48, 391, 599, 1682
HpyCH4III ACNGT 8 cut(s) 460, 825, 920, 952, 1007, 1531, 1553, 1894
HpyCH4IV ACGT 4 cut(s) 18, 480, 1032, 1253
HpyCH4V TGCA 7 cut(s) 484, 644, 1168, 1484, 1799, 1880, 2000
HpyF10VI GCNNNNNNNGC 5 cut(s) 422, 431, 440, 449, 510
HpyF3I CTNAG 3 cut(s) 110, 299, 1219
HpySE526I ACGT 4 cut(s) 18, 480, 1032, 1253
Hsp92I GRCGYC 1 cut(s) 1253
Hsp92II CATG 9 cut(s) 724, 745, 1172, 1230, 1307, 1421, 1582, 1700, 1724
HspAI GCGC 1 cut(s) 4
LmnI GCTCC 4 cut(s) 92, 249, 1389, 1913
Lsp1109I GCAGC 2 cut(s) 1152, 1497
LweI GCATC 4 cut(s) 631, 1353, 1889, 1965
MabI ACCWGGT 1 cut(s) 158
MaeI CTAG 3 cut(s) 596, 1652, 2053
MaeII ACGT 4 cut(s) 18, 480, 1032, 1253
MaeIII GTNAC 4 cut(s) 783, 1307, 1547, 1706
MbiI CCGCTC 4 cut(s) 87, 141, 1042, 1392
MflI RGATCY 3 cut(s) 1222, 1648, 1873
MhlI GDGCHC 4 cut(s) 194, 284, 427, 1429
MlsI TGGCCA 2 cut(s) 530, 1695
MluCI AATT 7 cut(s) 407, 584, 1276, 1374, 1571, 1656, 1815
MluNI TGGCCA 2 cut(s) 530, 1695
MmeI TCCRAC 6 cut(s) 123, 267, 333, 369, 1913, 2020
Mox20I TGGCCA 2 cut(s) 530, 1695
Mph1103I ATGCAT 2 cut(s) 646, 2002
MscI TGGCCA 2 cut(s) 530, 1695
MseI TTAA 5 cut(s) 636, 672, 678, 780, 2004
MslI CAYNNNNRTG 1 cut(s) 1422
Msp20I TGGCCA 2 cut(s) 530, 1695
MspA1I CMGCKG 1 cut(s) 752
MspCI CTTAAG 3 cut(s) 635, 677, 779
MspI CCGG 5 cut(s) 182, 219, 247, 1258, 2047
MspR9I CCNGG 9 cut(s) 160, 404, 473, 581, 1258, 1290, 1642, 1899, 1929
MvaI CCWGG 8 cut(s) 160, 404, 473, 581, 1290, 1642, 1899, 1929
MvnI CGCG 1 cut(s) 73
MwoI GCNNNNNNNGC 5 cut(s) 422, 431, 440, 449, 510
NciI CCSGG 1 cut(s) 1258
NcoI CCATGG 3 cut(s) 741, 1226, 1303
NdeI CATATG 1 cut(s) 1795
NlaIII CATG 9 cut(s) 724, 745, 1172, 1230, 1307, 1421, 1582, 1700, 1724
NlaIV GGNNCC 6 cut(s) 152, 827, 1187, 1286, 1836, 1980
NmeAIII GCCGAG 7 cut(s) 173, 206, 256, 263, 428, 464, 1328
NmuCI GTSAC 1 cut(s) 1547
NsiI ATGCAT 2 cut(s) 646, 2002
NspI RCATGY 2 cut(s) 1172, 1421
PaeI GCATGC 1 cut(s) 1421
PceI AGGCCT 1 cut(s) 416
PfeI GAWTC 2 cut(s) 75, 175
PflFI GACNNNGTC 4 cut(s) 160, 202, 214, 322
PfoI TCCNGGA 2 cut(s) 471, 1256
PkrI GCNGC 5 cut(s) 72, 273, 1044, 1167, 1512
PpuMI RGGWCCY 2 cut(s) 400, 1284
PshBI ATTAAT 1 cut(s) 672
Psp5II RGGWCCY 2 cut(s) 400, 1284
Psp6I CCWGG 8 cut(s) 158, 402, 471, 579, 1288, 1640, 1897, 1927
PspEI GGTNACC 1 cut(s) 1307
PspFI CCCAGC 1 cut(s) 1400
PspGI CCWGG 8 cut(s) 158, 402, 471, 579, 1288, 1640, 1897, 1927
PspN4I GGNNCC 6 cut(s) 152, 827, 1187, 1286, 1836, 1980
PspPPI RGGWCCY 2 cut(s) 400, 1284
PstNI CAGNNNCTG 2 cut(s) 800, 1544
PsuI RGATCY 3 cut(s) 1222, 1648, 1873
PsyI GACNNNGTC 4 cut(s) 160, 202, 214, 322
PvuII CAGCTG 1 cut(s) 752
RsaI GTAC 2 cut(s) 719, 2017
RsaNI GTAC 2 cut(s) 718, 2016
RseI CAYNNNNRTG 1 cut(s) 1422
Rsr2I CGGWCCG 2 cut(s) 216, 306
RsrII CGGWCCG 2 cut(s) 216, 306
SalI GTCGAC 1 cut(s) 316
SaqAI TTAA 5 cut(s) 636, 672, 678, 780, 2004
SatI GCNGC 5 cut(s) 71, 272, 1043, 1166, 1511
ScrFI CCNGG 9 cut(s) 160, 404, 473, 581, 1258, 1290, 1642, 1899, 1929
SduI GDGCHC 4 cut(s) 194, 284, 427, 1429
SexAI ACCWGGT 1 cut(s) 158
SfaNI GCATC 4 cut(s) 631, 1353, 1889, 1965
SfcI CTRYAG 1 cut(s) 916
SinI GGWCC 8 cut(s) 162, 216, 306, 400, 469, 1284, 1886, 1979
SmiMI CAYNNNNRTG 1 cut(s) 1422
SmlI CTYRAG 5 cut(s) 428, 635, 677, 779, 1523
SmoI CTYRAG 5 cut(s) 428, 635, 677, 779, 1523
SphI GCATGC 1 cut(s) 1421
Sse9I AATT 7 cut(s) 407, 584, 1276, 1374, 1571, 1656, 1815
SseBI AGGCCT 1 cut(s) 416
SspMI CTAG 3 cut(s) 596, 1652, 2053
StuI AGGCCT 1 cut(s) 416
StyD4I CCNGG 9 cut(s) 158, 402, 471, 579, 1256, 1288, 1640, 1897, 1927
StyI CCWWGG 5 cut(s) 417, 589, 741, 1226, 1303
TaaI ACNGT 8 cut(s) 460, 825, 920, 952, 1007, 1531, 1553, 1894
TaiI ACGT 4 cut(s) 21, 483, 1035, 1256
TaqI TCGA 5 cut(s) 78, 123, 128, 173, 317
TaqII GACCGA 3 cut(s) 204, 294, 312
TasI AATT 7 cut(s) 407, 584, 1276, 1374, 1571, 1656, 1815
TauI GCSGC 3 cut(s) 73, 274, 1045
TfiI GAWTC 2 cut(s) 75, 175
Tru1I TTAA 5 cut(s) 636, 672, 678, 780, 2004
Tru9I TTAA 5 cut(s) 636, 672, 678, 780, 2004
TscAI CASTG 3 cut(s) 463, 1012, 1558
TseFI GTSAC 1 cut(s) 1547
TseI GCWGC 2 cut(s) 1165, 1510
Tsp45I GTSAC 1 cut(s) 1547
TspDTI ATGAA 7 cut(s) 16, 705, 1043, 1449, 1643, 1737, 1779
TspRI CASTG 3 cut(s) 463, 1012, 1558
Tth111I GACNNNGTC 4 cut(s) 160, 202, 214, 322
Vha464I CTTAAG 3 cut(s) 635, 677, 779
VpaK11BI GGWCC 8 cut(s) 162, 216, 306, 400, 469, 1284, 1886, 1979
VspI ATTAAT 1 cut(s) 672
XagI CCTNNNNNAGG 1 cut(s) 1104
XapI RAATTY 4 cut(s) 584, 1276, 1571, 1815
XbaI TCTAGA 1 cut(s) 1651
XceI RCATGY 2 cut(s) 1172, 1421
XmiI GTMKAC 3 cut(s) 317, 915, 1533
XspI CTAG 3 cut(s) 596, 1652, 2053
ZraI GACGTC 1 cut(s) 1254
Zsp2I ATGCAT 2 cut(s) 646, 2002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.