Rmu_sc0006266.1_g000022

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006266.1
OG0007415
Physical Location & Seq
Reverse (-)
58458 .. 69234
10777 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3165 bp
ctgcatactgatccagatgattctggatcacctcctaggcgtgtgcctccatcagttccatctagaaagccgggttcgttgaaagttgagaacattgacaggaatggtgacgaccatggttttaaatatagagcctcacccagcacacgtccaaggcctattgaaaactttaaaattgtttcattgggattgcctagtctgaaaacaggattatctgatgatgacttgcgggaatcagcatacgaaatattgcttgcatctatggcaacatctgggattgtaatctgttctgttgaagatcaaaggaaacataggccttccagattgctgtcaggattaaagagtagaaaggataaaccaaatgtgcagtcgcagcctcttgataaaaacttacggctgatccgcaccatccgtgtgcagatgcagatttctgaagcaatggatgagtgcactagacagaagatgatgatgttatcgccagggagaacgcgggtgcagatcgatattcctcaaattgtgttggggcttttgaatttcacttttaagtctgatttttcaaatgaaaagtcttatatgcaatggaagaatagacaggcaagtatcttagaagaacttctctgcttttctcctaatcttgtggcgcatgatcatctaactattaagcgttctcttgctatgattagaaatgcaaaggagtgggactttatgtcttcttctggaaaggcagaggttatatcagttatcaaacaggcagctttaacgctgtcatctcttccaggacgctttgatctccaaagtgagacctattattggacttctgcatatcacttgaatattaggctttatgagaaactacttcttggtgtatttgatgttcttgatgaaagccagctgatagaggaagctgatgagttcctgatgctcttgaaattgacatggtctactttaggcatcactcaaaaaatgcatgatgcaatatatatgtgggtccttttccaacagtttgttggaacagatgaggctctgctattagaatatgcaacggtggagttgcaggagcttatatcagctaaagttgatgatgagaatgtaaggctatatatgaatagcctgctatgttcaatccactgcaacgccgtcgagataaagttaagtttggttgatgctgtcttctactctttaagcatttggtgtgagagtaaactacaagactatcatctgcatttcagtcagcaacacagtcacttaaagagggtgatgagcttagtgtcagcagttggcgttcttaatttcggtgatggtggtcatatgaagttgaggaggttcaatctcaatacggatgctgctaaaatacttgagtcatatgtgaaaaggtcaattgaagctgcatacaggcgggtagcaagtaacatagatcacttatcagaagtggaaaagaaacatcctttgggcgtgcttgcaaatgaactgaggttgattgctgagagagaactaaatgtgttctacccggaactatgcaaatggtgccctaattctgggatgattgcagctatgatgttgcaccagatttattgggaaaggctgagaccctttctggatggagtgtcatctctttctgaagatgttaaagccgtgcttccagctgctgatttgttggatcaagtcgtaactcagctttacaatactggtaatggagaaaattgtgaagatctgcaccattatccgattggtgaagttgctaaacctatcattcttgattgggtgattgctcagcatgaacgcatcttggaatggactggacgtgcttttgatcttgagaagtgggagcctttgtcatctcagcaaagacaggcagcatcgatagttgaagtgtttagaattatagaggagactgtggatcaattatttggtttccgtctccctatggatatcactcatttgcaagctctgttatctgttgtctttcataccttggatgcctatttgctgaaattgctcgaccagatagttgagaaaaattacttatatccatcagctcctccattgactcgctacaaggagacgactattccggtgctgaaaaagaagtttcttgagtgtatgcctttggatgacaatgtgtatgacaagttgaatactttgacaatacccaaactctgtgtccgaatgaacacgttgaaatatattcagaaacaaattgacatactagaagatggtatcagaaaatcttgggctctcatcagacaatcaattgataaaacatgtgccagagaacagcgtttgggaacttcaacatgcaatgaacaaattgatgagctcttctgcaccacctttgacatcatcagggataatgcagcaaatgccatcagtaaaatttgtgactttactggtgcaaaagctgtgttctgggatctcagacatgcattcctcttttgtttatattgtggaagcgttgaagcttctcgtttggatggtgttctcacacgcattgatactgtccttggccatgtatgcagttatattgatgattctcttagagacgctgtggttttaagcatctgtcgggcatcactggaaggctttgcgtgggttttgcttgatggtgggccttcccgtgcattttgtgattcagatattgtactaatagaggatgacctttctgcactaaaggaattttttgtagctgatggtgaaggccttccccgatcagtagtggagcaagaagcaaagtttcctgaggaaatactgaacttgtattcactgcagactgaaactatcatccaaaagctgatggctgcaagtgaacaaatatcattggggctagattcacatgatcataactatatgcgattaaataatgcccacacttttgtgcgggtgttatgccacaaaaaagatagagaagcctctaaattcttgaaaaggcaatatcagctccccatgtcttcagaatatgaagacactccatcaacagatccaacttcccaatcacctctcagatcagatctatcaaagcgaagcatgtcagatctagcaaagcgaagcacttcagatctagcaaagcgaagcacgtcatttcgttggaataatacgcatagtacctttacctcatttaagaagaaacttcaagaagcaacatctgaattcaggaatgtggcgtggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1054

Amino Acids

120.26

Weight (kDa)

6.06

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 583 - 982 1.3e-101 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1524
AccI GTMKAC 1 cut(s) 941
AccII CGCG 1 cut(s) 490
AciI CCGC 5 cut(s) 229, 403, 490, 1396, 2875
AclWI GGATC 7 cut(s) 5, 34, 394, 1665, 1905, 2418, 2969
AcoI YGGCCR 1 cut(s) 2503
AcsI RAATTY 5 cut(s) 532, 2373, 2672, 2912, 3143
AcuI CTGAAG 4 cut(s) 453, 1638, 2931, 3033
AfaI GTAC 2 cut(s) 2640, 3100
AfiI CCNNNNNNNGG 2 cut(s) 810, 1535
AflIII ACRYGT 3 cut(s) 146, 2172, 2261
AhdI GACNNNNNGTC 1 cut(s) 706
AjiI CACGTC 3 cut(s) 149, 1802, 3072
AjnI CCWGG 2 cut(s) 478, 775
AjuI GAANNNNNNNTTGG 2 cut(s) 1430, 1462
AleI CACNNNNGTG 1 cut(s) 2870
Alw21I GWGCWC 2 cut(s) 452, 2319
Alw26I GTCTC 6 cut(s) 794, 1579, 1883, 1922, 2054, 2532
Alw44I GTGCAC 1 cut(s) 448
AlwI GGATC 7 cut(s) 5, 34, 394, 1665, 1905, 2418, 2969
AlwNI CAGNNNCTG 1 cut(s) 1646
AoxI GGCC 5 cut(s) 155, 314, 2503, 2606, 2695
ApaLI GTGCAC 1 cut(s) 448
ApeKI GCWGC 9 cut(s) 373, 752, 1343, 1385, 1547, 1643, 1853, 2354, 2795
ApoI RAATTY 5 cut(s) 532, 2373, 2672, 2912, 3143
ArsI GACNNNNNNTTYG 6 cut(s) 353, 385, 551, 583, 2145, 2177
Asp700I GAANNNNTTC 3 cut(s) 612, 2697, 3046
AspA2I CCTAGG 1 cut(s) 35
AspLEI GCGC 1 cut(s) 643
AspS9I GGNCC 2 cut(s) 988, 2606
AsuC2I CCSGG 2 cut(s) 72, 1508
AsuHPI GGTGA 9 cut(s) 21, 119, 129, 1267, 1307, 1742, 1774, 2702, 2982
AvaII GGWCC 1 cut(s) 988
AvrII CCTAGG 1 cut(s) 35
AxyI CCTNAGG 1 cut(s) 2736
BaeGI GKGCMC 2 cut(s) 452, 1529
BalI TGGCCA 1 cut(s) 2505
BanI GGYRCC 1 cut(s) 1524
BanII GRGCYC 2 cut(s) 2236, 2319
BbsI GAAGAC 4 cut(s) 702, 1162, 2937, 2964
Bbv12I GWGCWC 2 cut(s) 452, 2319
BbvI GCAGC 9 cut(s) 385, 764, 1330, 1372, 1559, 1630, 1865, 2366, 2782
BceAI ACGGC 3 cut(s) 410, 1121, 1616
BcgI CGANNNNNNTGC 2 cut(s) 1120, 1154
BciT130I CCWGG 2 cut(s) 480, 777
BclI TGATCA 2 cut(s) 646, 2833
BcnI CCSGG 2 cut(s) 72, 1508
BcoDI GTCTC 6 cut(s) 794, 1579, 1883, 1922, 2054, 2532
BfaI CTAG 8 cut(s) 36, 63, 195, 453, 2207, 2822, 3032, 3056
BfmI CTRYAG 1 cut(s) 2762
BglII AGATCT 4 cut(s) 1708, 3004, 3028, 3052
BisI GCNGC 9 cut(s) 374, 753, 1344, 1386, 1548, 1644, 1854, 2355, 2796
BlnI CCTAGG 1 cut(s) 35
BlpI GCTNAGC 1 cut(s) 1770
BlsI GCNGC 9 cut(s) 375, 754, 1345, 1387, 1549, 1645, 1855, 2356, 2797
Bme1390I CCNGG 4 cut(s) 72, 480, 777, 1508
Bme18I GGWCC 1 cut(s) 988
BmeRI GACNNNNNGTC 1 cut(s) 706
BmgBI CACGTC 3 cut(s) 149, 1802, 3072
BmgT120I GGNCC 2 cut(s) 988, 2606
BmiI GGNNCC 3 cut(s) 989, 1526, 1827
BmrFI CCNGG 4 cut(s) 72, 480, 777, 1508
BpiI GAAGAC 4 cut(s) 702, 1162, 2937, 2964
Bpu1102I GCTNAGC 1 cut(s) 1770
BpuEI CTTGAG 3 cut(s) 1376, 1835, 2114
BpuMI CCSGG 2 cut(s) 72, 1508
Bsa29I ATCGAT 2 cut(s) 501, 1859
BsaBI GATNNNNATC 1 cut(s) 281
BsaI GGTCTC 2 cut(s) 794, 1579
BsaJI CCNNGG 6 cut(s) 35, 115, 152, 479, 1971, 2500
BsaWI WCCGGW 1 cut(s) 2071
BsaXI ACNNNNNCTCC 2 cut(s) 1817, 1847
Bsc4I CCNNNNNNNGG 2 cut(s) 810, 1535
Bse1I ACTGG 4 cut(s) 1690, 1801, 2392, 2577
Bse21I CCTNAGG 1 cut(s) 2736
Bse3DI GCAATG 3 cut(s) 444, 584, 2305
Bse8I GATNNNNATC 1 cut(s) 281
BseBI CCWGG 2 cut(s) 480, 777
BseCI ATCGAT 2 cut(s) 501, 1859
BseDI CCNNGG 6 cut(s) 35, 115, 152, 479, 1971, 2500
BseJI GATNNNNATC 1 cut(s) 281
BseLI CCNNNNNNNGG 2 cut(s) 810, 1535
BseMI GCAATG 3 cut(s) 444, 584, 2305
BseMII CTCAG 9 cut(s) 1460, 1473, 1574, 1685, 1784, 1853, 2428, 2727, 3010
BseNI ACTGG 4 cut(s) 1690, 1801, 2392, 2577
BseRI GAGGAG 3 cut(s) 1333, 1901, 2028
BseSI GKGCMC 2 cut(s) 452, 1529
BseXI GCAGC 9 cut(s) 385, 764, 1330, 1372, 1559, 1630, 1865, 2366, 2782
BseYI CCCAGC 1 cut(s) 140
BsgI GTGCAG 6 cut(s) 386, 437, 515, 1697, 2308, 2646
Bsh1236I CGCG 1 cut(s) 490
BshFI GGCC 5 cut(s) 157, 316, 2505, 2608, 2697
BshNI GGYRCC 1 cut(s) 1524
BshVI ATCGAT 2 cut(s) 501, 1859
BsiHKAI GWGCWC 2 cut(s) 452, 2319
BsiSI CCGG 3 cut(s) 71, 1508, 2072
BslFI GGGAC 1 cut(s) 713
BslI CCNNNNNNNGG 2 cut(s) 810, 1535
BsmAI GTCTC 6 cut(s) 794, 1579, 1883, 1922, 2054, 2532
BsmBI CGTCTC 3 cut(s) 1922, 2054, 2532
BsmFI GGGAC 1 cut(s) 713
BsmI GAATGC 1 cut(s) 2423
BsnI GGCC 5 cut(s) 157, 316, 2505, 2608, 2697
Bso31I GGTCTC 2 cut(s) 794, 1579
Bsp1286I GDGCHC 4 cut(s) 452, 1529, 2236, 2319
Bsp1720I GCTNAGC 1 cut(s) 1770
Bsp19I CCATGG 1 cut(s) 115
BspACI CCGC 5 cut(s) 229, 403, 490, 1396, 2875
BspANI GGCC 5 cut(s) 157, 316, 2505, 2608, 2697
BspCNI CTCAG 9 cut(s) 1461, 1474, 1575, 1684, 1783, 1852, 2427, 2728, 3009
BspDI ATCGAT 2 cut(s) 501, 1859
BspFNI CGCG 1 cut(s) 490
BspLI GGNNCC 3 cut(s) 989, 1526, 1827
BspMAI CTGCAG 1 cut(s) 2766
BspPI GGATC 7 cut(s) 5, 34, 394, 1665, 1905, 2418, 2969
BspQI GCTCTTC 1 cut(s) 2324
BspT107I GGYRCC 1 cut(s) 1524
BspTNI GGTCTC 2 cut(s) 794, 1579
BsrDI GCAATG 3 cut(s) 444, 584, 2305
BsrI ACTGG 4 cut(s) 1690, 1801, 2392, 2577
BssECI CCNNGG 6 cut(s) 35, 115, 152, 479, 1971, 2500
BssT1I CCWWGG 5 cut(s) 35, 115, 152, 1971, 2500
Bst2UI CCWGG 2 cut(s) 480, 777
Bst4CI ACNGT 5 cut(s) 1002, 1045, 1241, 1894, 2497
Bst6I CTCTTC 2 cut(s) 777, 2324
BstAPI GCANNNNNTGC 2 cut(s) 1524, 2360
BstC8I GCNNGC 6 cut(s) 255, 890, 1112, 1454, 1458, 1944
BstDSI CCRYGG 1 cut(s) 115
BstFNI CGCG 1 cut(s) 490
BstHHI GCGC 1 cut(s) 643
BstMAI GTCTC 6 cut(s) 794, 1579, 1883, 1922, 2054, 2532
BstMWI GCNNNNNNNGC 7 cut(s) 263, 373, 1524, 1993, 2360, 2511, 2932
BstNI CCWGG 2 cut(s) 480, 777
BstNSI RCATGY 4 cut(s) 2265, 2298, 2423, 3025
BstSCI CCNGG 4 cut(s) 70, 478, 775, 1506
BstSFI CTRYAG 1 cut(s) 2762
BstSLI GKGCMC 2 cut(s) 452, 1529
BstUI CGCG 1 cut(s) 490
BstV1I GCAGC 9 cut(s) 385, 764, 1330, 1372, 1559, 1630, 1865, 2366, 2782
BstV2I GAAGAC 4 cut(s) 702, 1162, 2937, 2964
BstX2I RGATCY 6 cut(s) 1708, 2410, 2974, 3004, 3028, 3052
BstYI RGATCY 6 cut(s) 1708, 2410, 2974, 3004, 3028, 3052
Bsu15I ATCGAT 2 cut(s) 501, 1859
Bsu36I CCTNAGG 1 cut(s) 2736
BsuRI GGCC 5 cut(s) 157, 316, 2505, 2608, 2697
BsuTUI ATCGAT 2 cut(s) 501, 1859
BtgI CCRYGG 1 cut(s) 115
BtrI CACGTC 3 cut(s) 149, 1802, 3072
BtsI GCAGTG 2 cut(s) 1126, 2759
BtsIMutI CAGTG 3 cut(s) 1126, 2570, 2759
Cac8I GCNNGC 6 cut(s) 255, 890, 1112, 1454, 1458, 1944
CaiI CAGNNNCTG 1 cut(s) 1646
CfoI GCGC 1 cut(s) 643
Cfr13I GGNCC 2 cut(s) 988, 2606
ClaI ATCGAT 2 cut(s) 501, 1859
CseI GACGC 2 cut(s) 789, 2549
Csp6I GTAC 2 cut(s) 2639, 3099
CviQI GTAC 2 cut(s) 2639, 3099
DraI TTTAAA 2 cut(s) 124, 172
DriI GACNNNNNGTC 1 cut(s) 706
EaeI YGGCCR 1 cut(s) 2503
Eam1104I CTCTTC 2 cut(s) 777, 2324
Eam1105I GACNNNNNGTC 1 cut(s) 706
EarI CTCTTC 2 cut(s) 777, 2324
Ecl136II GAGCTC 1 cut(s) 2317
Eco130I CCWWGG 5 cut(s) 35, 115, 152, 1971, 2500
Eco147I AGGCCT 3 cut(s) 157, 316, 2697
Eco24I GRGCYC 2 cut(s) 2236, 2319
Eco31I GGTCTC 2 cut(s) 794, 1579
Eco32I GATATC 1 cut(s) 1930
Eco47I GGWCC 1 cut(s) 988
Eco53kI GAGCTC 1 cut(s) 2317
Eco57I CTGAAG 4 cut(s) 453, 1638, 2931, 3033
Eco81I CCTNAGG 1 cut(s) 2736
EcoICRI GAGCTC 1 cut(s) 2317
EcoO109I RGGNCCY 1 cut(s) 988
EcoRI GAATTC 1 cut(s) 3143
EcoRII CCWGG 2 cut(s) 478, 775
EcoRV GATATC 1 cut(s) 1930
EcoT14I CCWWGG 5 cut(s) 35, 115, 152, 1971, 2500
EcoT22I ATGCAT 2 cut(s) 969, 2425
EcoT38I GRGCYC 2 cut(s) 2236, 2319
ErhI CCWWGG 5 cut(s) 35, 115, 152, 1971, 2500
Esp3I CGTCTC 3 cut(s) 1922, 2054, 2532
FalI AAGNNNNNCTT 2 cut(s) 1620, 1652
FaqI GGGAC 1 cut(s) 713
FauI CCCGC 4 cut(s) 222, 483, 1389, 2868
FauNDI CATATG 2 cut(s) 1308, 1363
FbaI TGATCA 2 cut(s) 646, 2833
FblI GTMKAC 1 cut(s) 941
Fnu4HI GCNGC 9 cut(s) 374, 753, 1344, 1386, 1548, 1644, 1854, 2355, 2796
FriOI GRGCYC 2 cut(s) 2236, 2319
Fsp4HI GCNGC 9 cut(s) 374, 753, 1344, 1386, 1548, 1644, 1854, 2355, 2796
FspBI CTAG 8 cut(s) 36, 63, 195, 453, 2207, 2822, 3032, 3056
GlaI GCGC 1 cut(s) 642
GluI GCNGC 9 cut(s) 374, 753, 1344, 1386, 1548, 1644, 1854, 2355, 2796
GsaI CCCAGC 1 cut(s) 144
HaeIII GGCC 5 cut(s) 157, 316, 2505, 2608, 2697
HapII CCGG 3 cut(s) 71, 1508, 2072
HgaI GACGC 2 cut(s) 789, 2549
HhaI GCGC 1 cut(s) 643
Hin6I GCGC 1 cut(s) 641
HinP1I GCGC 1 cut(s) 641
HindIII AAGCTT 1 cut(s) 2457
HinfI GANTC 7 cut(s) 20, 233, 1358, 2047, 2528, 2627, 2825
HpaII CCGG 3 cut(s) 71, 1508, 2072
HphI GGTGA 9 cut(s) 21, 119, 129, 1267, 1307, 1742, 1774, 2702, 2982
Hpy166II GTNNAC 4 cut(s) 450, 942, 1202, 2804
Hpy8I GTNNAC 4 cut(s) 450, 942, 1202, 2804
Hpy99I CGWCG 1 cut(s) 1142
HpyAV CCTTC 5 cut(s) 327, 2570, 2619, 2687, 2708
HpyCH4III ACNGT 5 cut(s) 1002, 1045, 1241, 1894, 2497
HpyCH4IV ACGT 4 cut(s) 148, 1801, 2174, 3071
HpyF10VI GCNNNNNNNGC 7 cut(s) 263, 373, 1524, 1993, 2360, 2511, 2932
HpySE526I ACGT 4 cut(s) 148, 1801, 2174, 3071
HspAI GCGC 1 cut(s) 641
Ksp22I TGATCA 2 cut(s) 646, 2833
LguI GCTCTTC 1 cut(s) 2324
LmnI GCTCC 5 cut(s) 1057, 1825, 2041, 2716, 2940
Lsp1109I GCAGC 9 cut(s) 385, 764, 1330, 1372, 1559, 1630, 1865, 2366, 2782
MaeI CTAG 8 cut(s) 36, 63, 195, 453, 2207, 2822, 3032, 3056
MaeII ACGT 4 cut(s) 148, 1801, 2174, 3071
MaeIII GTNAC 5 cut(s) 107, 1241, 1406, 1666, 2378
MfeI CAATTG 2 cut(s) 1377, 2250
MflI RGATCY 6 cut(s) 1708, 2410, 2974, 3004, 3028, 3052
MhlI GDGCHC 4 cut(s) 452, 1529, 2236, 2319
MlsI TGGCCA 1 cut(s) 2505
MluNI TGGCCA 1 cut(s) 2505
MlyI GAGTC 2 cut(s) 1367, 2041
MmeI TCCRAC 5 cut(s) 988, 1021, 1635, 3002, 3062
Mox20I TGGCCA 1 cut(s) 2505
Mph1103I ATGCAT 2 cut(s) 969, 2425
MroXI GAANNNNTTC 3 cut(s) 612, 2697, 3046
MscI TGGCCA 1 cut(s) 2505
MslI CAYNNNNRTG 2 cut(s) 413, 2870
Msp20I TGGCCA 1 cut(s) 2505
MspA1I CMGCKG 2 cut(s) 892, 1643
MspI CCGG 3 cut(s) 71, 1508, 2072
MspR9I CCNGG 4 cut(s) 72, 480, 777, 1508
MunI CAATTG 2 cut(s) 1377, 2250
Mva1269I GAATGC 1 cut(s) 2423
MvaI CCWGG 2 cut(s) 480, 777
MvnI CGCG 1 cut(s) 490
MwoI GCNNNNNNNGC 7 cut(s) 263, 373, 1524, 1993, 2360, 2511, 2932
NciI CCSGG 2 cut(s) 72, 1508
NcoI CCATGG 1 cut(s) 115
NdeI CATATG 2 cut(s) 1308, 1363
NlaIV GGNNCC 3 cut(s) 989, 1526, 1827
NmuCI GTSAC 3 cut(s) 107, 1241, 2378
NsiI ATGCAT 2 cut(s) 969, 2425
NspI RCATGY 4 cut(s) 2265, 2298, 2423, 3025
OliI CACNNNNGTG 1 cut(s) 2870
PceI AGGCCT 3 cut(s) 157, 316, 2697
PciI ACATGT 1 cut(s) 2261
PciSI GCTCTTC 1 cut(s) 2324
PctI GAATGC 1 cut(s) 2423
PdmI GAANNNNTTC 3 cut(s) 612, 2697, 3046
PfeI GAWTC 5 cut(s) 20, 233, 2528, 2627, 2825
PflFI GACNNNGTC 1 cut(s) 937
PfoI TCCNGGA 1 cut(s) 775
PkrI GCNGC 9 cut(s) 375, 754, 1345, 1387, 1549, 1645, 1855, 2356, 2797
PleI GAGTC 2 cut(s) 1366, 2041
PpsI GAGTC 2 cut(s) 1366, 2041
PpuMI RGGWCCY 1 cut(s) 988
PscI ACATGT 1 cut(s) 2261
Psp124BI GAGCTC 1 cut(s) 2319
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 2 cut(s) 478, 775
PspFI CCCAGC 1 cut(s) 140
PspGI CCWGG 2 cut(s) 478, 775
PspN4I GGNNCC 3 cut(s) 989, 1526, 1827
PspPI GGNCC 2 cut(s) 988, 2606
PspPPI RGGWCCY 1 cut(s) 988
PsrI GAACNNNNNNTAC 2 cut(s) 858, 890
PstI CTGCAG 1 cut(s) 2766
PstNI CAGNNNCTG 1 cut(s) 1646
PsuI RGATCY 6 cut(s) 1708, 2410, 2974, 3004, 3028, 3052
PsyI GACNNNGTC 1 cut(s) 937
PvuII CAGCTG 2 cut(s) 892, 1643
RsaI GTAC 2 cut(s) 2640, 3100
RsaNI GTAC 2 cut(s) 2639, 3099
RseI CAYNNNNRTG 2 cut(s) 413, 2870
SacI GAGCTC 1 cut(s) 2319
SapI GCTCTTC 1 cut(s) 2324
SatI GCNGC 9 cut(s) 374, 753, 1344, 1386, 1548, 1644, 1854, 2355, 2796
Sau96I GGNCC 2 cut(s) 988, 2606
SchI GAGTC 2 cut(s) 1367, 2041
ScrFI CCNGG 4 cut(s) 72, 480, 777, 1508
SduI GDGCHC 4 cut(s) 452, 1529, 2236, 2319
SfcI CTRYAG 1 cut(s) 2762
SinI GGWCC 1 cut(s) 988
SmiMI CAYNNNNRTG 2 cut(s) 413, 2870
SmlI CTYRAG 3 cut(s) 1355, 1814, 2093
SmoI CTYRAG 3 cut(s) 1355, 1814, 2093
SseBI AGGCCT 3 cut(s) 157, 316, 2697
SsiI CCGC 5 cut(s) 229, 403, 490, 1396, 2875
SspI AATATT 2 cut(s) 249, 835
SspMI CTAG 8 cut(s) 36, 63, 195, 453, 2207, 2822, 3032, 3056
SstI GAGCTC 1 cut(s) 2319
StuI AGGCCT 3 cut(s) 157, 316, 2697
StyD4I CCNGG 4 cut(s) 70, 478, 775, 1506
StyI CCWWGG 5 cut(s) 35, 115, 152, 1971, 2500
TaaI ACNGT 5 cut(s) 1002, 1045, 1241, 1894, 2497
TaiI ACGT 4 cut(s) 151, 1804, 2177, 3074
TaqI TCGA 4 cut(s) 501, 1140, 1859, 1998
TatI WGTACW 1 cut(s) 2638
TfiI GAWTC 5 cut(s) 20, 233, 2528, 2627, 2825
TscAI CASTG 3 cut(s) 1133, 2577, 2766
TseFI GTSAC 3 cut(s) 107, 1241, 2378
TseI GCWGC 9 cut(s) 373, 752, 1343, 1385, 1547, 1643, 1853, 2354, 2795
Tsp45I GTSAC 3 cut(s) 107, 1241, 2378
TspGWI ACGGA 3 cut(s) 401, 1352, 1904
TspRI CASTG 3 cut(s) 1133, 2577, 2766
Tth111I GACNNNGTC 1 cut(s) 937
VneI GTGCAC 1 cut(s) 448
VpaK11BI GGWCC 1 cut(s) 988
XapI RAATTY 5 cut(s) 532, 2373, 2672, 2912, 3143
XbaI TCTAGA 1 cut(s) 62
XceI RCATGY 4 cut(s) 2265, 2298, 2423, 3025
XcmI CCANNNNNNNNNTGG 2 cut(s) 1004, 1724
XmaJI CCTAGG 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 941
XmnI GAANNNNTTC 3 cut(s) 612, 2697, 3046
XspI CTAG 8 cut(s) 36, 63, 195, 453, 2207, 2822, 3032, 3056
Zsp2I ATGCAT 2 cut(s) 969, 2425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.