Rmu_sc0006328.1_g000004

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006328.1
OG0019246
Physical Location & Seq
Forward (+)
17580 .. 23746
6167 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1791 bp
atggaaaaggttgtggatgcagcggaaagtggagcaggaaaattctcatcatctaaagggaagtcacattcaaagatttctgccctaggatcacttcagaaagacaaaaaaagacttgattgttggactgctccattggatgatataatgaagattaatattgattcgttgtggaggaaggtggataccaaatgtgttctagttgttttggtcagaaattcctatggagtagttcaagcttgtctgtcaaggaccacattttgtgcaacccctttggatggcgaagcatctgctgcactgcttgccgttgaagttgcagaaactttgggtctatctacttatgtgcttgagacttctagcacagaattgataactaaagttcatgaggctaagcacgctggacatctccaagagaagctgaagaatcttagtgagctctccatggaagtttcttggtctcttggttcattatctgctaatgctactactagggctgcaacaagggcaattggtacaggagtgtgtagtgattcaactgcaaaattcttgcctggtccggatgttactcgagaagagtggttacttactatgcctgattgttttattgatcttgttttccgtgatcaggaagctgattgtgcttttatccgacatgtcctaaatgtctatgagcgagcatttggtcaacagataaatatgcagaaaagtaatgttgtcttcagtggtagcgtgtccccttcaatgcgacaatccatggcggatgttataggagctcaggttgttgaaaagcatgagaagtatctagaaattccaactttggtgggtaggtccaagtctgatacctttgcctacattaaagacaatctttcaaagaaacttacaggtggttcaaatagtgtagatgaaggagtagagagtcgatctgatgcacatgaaaaagaatcaaatgagcgtcctcacaagcctcatgatgaccaaaatggagcgataaaatctcaagaggatgatcatggcaaagcagaagtacaagaatcaaaatatcatgacgatgacaaagacttgaatacgagcggtttaactaacgaaggtgaagaagtagagccccaatctaatgcagatgaagagatatcagataagcatcactgcaagcctcttaataacctcttgggactaagcataggagaaagaattcctcactttagaggagccggatcccaacatcttatgcatggagaagcatcacgcatgggagagacattttgcaagatgggatccaccgtcacatgcattggtgatggcactactacaaatacatccattttattcatcgaaggtctaaacagtttcagagttggtctctgcacttgctcggcctacacccaaacgtgggtgacgtctgcggagagagaagaggtgaggcgacctcgggggcagcaacatcgtggaactgaagcaacaatagtaagcagtcccgcctggggttgcttcgatctcggcctgggggcagcgtctgggcaggctgaagccacggagcggccggacgagtacgtggctacttattatgactttagctactctactaatgttgatatggataacttggagaaattagaaggcaaaagtttgggggaagcacctaaagcggcaaatgaattggttcctatcattttgggatggtgggatgaattcagagcatctcatgctatatttcatggtcaagcccctgtgactagtgtctggtggaggaagccacccattggtgtactcaaactgaatatagatgcgctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

596

Amino Acids

65.24

Weight (kDa)

5.37

Isoelectric Point (pI)

29.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019246)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g09142
rosa_multiflora Rmu_sc0006328.1_g000004
rosa_rugosa Rorug01G0294400 Rorug01G0294500
rosa_samantha Rh1AG303800 Rh1AG304000 Rh1AG304300 Rh1CG285200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1397
AccB7I CCANNNNNTGG 1 cut(s) 1757
AccBSI CCGCTC 2 cut(s) 1071, 1534
AccIII TCCGGA 1 cut(s) 556
AciI CCGC 7 cut(s) 23, 758, 1071, 1400, 1473, 1534, 1643
AclWI GGATC 5 cut(s) 97, 1206, 1219, 1266, 1279
AcoI YGGCCR 1 cut(s) 1535
AcsI RAATTY 6 cut(s) 41, 217, 542, 807, 1188, 1685
AcuI CTGAAG 5 cut(s) 80, 440, 703, 1470, 1542
AcyI GRCGYC 1 cut(s) 1394
AfaI GTAC 4 cut(s) 514, 1026, 1547, 1764
AfiI CCNNNNNNNGG 7 cut(s) 278, 625, 1386, 1387, 1478, 1533, 1757
AflIII ACRYGT 1 cut(s) 652
AgsI TTSAA 9 cut(s) 72, 236, 311, 534, 741, 785, 870, 891, 1063
AhlI ACTAGT 1 cut(s) 1730
AjnI CCWGG 3 cut(s) 550, 1475, 1497
AluBI AGCT 6 cut(s) 239, 418, 436, 632, 773, 1572
AluI AGCT 6 cut(s) 239, 418, 436, 632, 773, 1572
Alw21I GWGCWC 2 cut(s) 438, 775
Alw26I GTCTC 4 cut(s) 344, 462, 1247, 1361
AlwI GGATC 5 cut(s) 97, 1206, 1219, 1266, 1279
AlwNI CAGNNNCTG 1 cut(s) 1511
Ama87I CYCGRG 2 cut(s) 567, 1425
Aor13HI TCCGGA 1 cut(s) 556
AoxI GGCC 3 cut(s) 1371, 1495, 1535
ApeKI GCWGC 5 cut(s) 20, 293, 494, 1432, 1505
ApoI RAATTY 6 cut(s) 41, 217, 542, 807, 1188, 1685
AseI ATTAAT 1 cut(s) 156
Asp700I GAANNNNTTC 2 cut(s) 1188, 1656
AspA2I CCTAGG 1 cut(s) 85
AspLEI GCGC 1 cut(s) 1786
AspS9I GGNCC 3 cut(s) 252, 554, 828
AsuHPI GGTGA 4 cut(s) 1100, 1304, 1402, 1426
AvaI CYCGRG 2 cut(s) 567, 1425
AvaII GGWCC 3 cut(s) 252, 554, 828
AvrII CCTAGG 1 cut(s) 85
BaeI ACNNNNGTAYC 2 cut(s) 504, 537
BamHI GGATCC 2 cut(s) 1211, 1271
BanII GRGCYC 3 cut(s) 438, 775, 1104
BarI GAAGNNNNNNTAC 2 cut(s) 564, 596
BbsI GAAGAC 1 cut(s) 709
Bbv12I GWGCWC 2 cut(s) 438, 775
BbvI GCAGC 5 cut(s) 32, 280, 481, 1444, 1517
BccI CCATC 4 cut(s) 272, 1261, 1289, 1668
BceAI ACGGC 1 cut(s) 290
BcgI CGANNNNNNTGC 4 cut(s) 272, 306, 1421, 1455
BciT130I CCWGG 3 cut(s) 552, 1477, 1499
BciVI GTATCC 1 cut(s) 178
BclI TGATCA 2 cut(s) 622, 1006
BcoDI GTCTC 4 cut(s) 344, 462, 1247, 1361
BcuI ACTAGT 1 cut(s) 1730
BfaI CTAG 6 cut(s) 86, 200, 357, 489, 803, 1731
BfuI GTATCC 1 cut(s) 178
BisI GCNGC 7 cut(s) 21, 294, 495, 1433, 1506, 1535, 1644
BlnI CCTAGG 1 cut(s) 85
BlpI GCTNAGC 1 cut(s) 390
BlsI GCNGC 7 cut(s) 22, 295, 496, 1434, 1507, 1536, 1645
Bme1390I CCNGG 3 cut(s) 552, 1477, 1499
Bme18I GGWCC 3 cut(s) 252, 554, 828
BmeT110I CYCGRG 2 cut(s) 567, 1425
BmgT120I GGNCC 3 cut(s) 252, 554, 828
BmiI GGNNCC 4 cut(s) 1207, 1213, 1273, 1659
BmrFI CCNGG 3 cut(s) 552, 1477, 1499
BmsI GCATC 7 cut(s) 7, 296, 916, 1147, 1247, 1703, 1771
BoxI GACNNNNGTC 1 cut(s) 1733
BpiI GAAGAC 1 cut(s) 709
BplI GAGNNNNNCTC 4 cut(s) 1341, 1373, 1408, 1440
Bpu10I CCTNAGC 1 cut(s) 774
Bpu1102I GCTNAGC 1 cut(s) 390
BpuEI CTTGAG 2 cut(s) 368, 981
BsaAI YACGTR 1 cut(s) 1549
BsaBI GATNNNNATC 1 cut(s) 1137
BsaHI GRCGYC 1 cut(s) 1394
BsaI GGTCTC 2 cut(s) 462, 1361
BsaJI CCNNGG 7 cut(s) 85, 441, 753, 1424, 1476, 1498, 1527
BsaWI WCCGGW 1 cut(s) 556
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 7 cut(s) 278, 625, 1386, 1387, 1478, 1533, 1757
Bse8I GATNNNNATC 1 cut(s) 1137
BseAI TCCGGA 1 cut(s) 556
BseBI CCWGG 3 cut(s) 552, 1477, 1499
BseDI CCNNGG 7 cut(s) 85, 441, 753, 1424, 1476, 1498, 1527
BseGI GGATG 9 cut(s) 22, 145, 283, 565, 766, 1009, 1313, 1679, 1687
BseJI GATNNNNATC 1 cut(s) 1137
BseLI CCNNNNNNNGG 7 cut(s) 278, 625, 1386, 1387, 1478, 1533, 1757
BseMII CTCAG 1 cut(s) 788
BseRI GAGGAG 1 cut(s) 1218
BseX3I CGGCCG 1 cut(s) 1535
BseXI GCAGC 5 cut(s) 32, 280, 481, 1444, 1517
BsgI GTGCAG 2 cut(s) 279, 1345
Bsh1285I CGRYCG 1 cut(s) 1538
BshFI GGCC 3 cut(s) 1373, 1497, 1537
BsiEI CGRYCG 1 cut(s) 1538
BsiHKAI GWGCWC 2 cut(s) 438, 775
BsiHKCI CYCGRG 2 cut(s) 567, 1425
BsiSI CCGG 3 cut(s) 557, 1209, 1538
BslFI GGGAC 3 cut(s) 718, 1182, 1455
BslI CCNNNNNNNGG 7 cut(s) 278, 625, 1386, 1387, 1478, 1533, 1757
BsmAI GTCTC 4 cut(s) 344, 462, 1247, 1361
BsmFI GGGAC 3 cut(s) 718, 1182, 1455
BsnI GGCC 3 cut(s) 1373, 1497, 1537
Bso31I GGTCTC 2 cut(s) 462, 1361
BsoBI CYCGRG 2 cut(s) 567, 1425
Bsp1286I GDGCHC 3 cut(s) 438, 775, 1104
Bsp13I TCCGGA 1 cut(s) 556
Bsp143I GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
Bsp1720I GCTNAGC 1 cut(s) 390
Bsp19I CCATGG 2 cut(s) 441, 753
BspACI CCGC 7 cut(s) 23, 758, 1071, 1400, 1473, 1534, 1643
BspANI GGCC 3 cut(s) 1373, 1497, 1537
BspCNI CTCAG 1 cut(s) 787
BspEI TCCGGA 1 cut(s) 556
BspHI TCATGA 3 cut(s) 382, 967, 1042
BspLI GGNNCC 4 cut(s) 1207, 1213, 1273, 1659
BspPI GGATC 5 cut(s) 97, 1206, 1219, 1266, 1279
BspTNI GGTCTC 2 cut(s) 462, 1361
BsrBI CCGCTC 2 cut(s) 1071, 1534
BssECI CCNNGG 7 cut(s) 85, 441, 753, 1424, 1476, 1498, 1527
BssMI GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
BssNI GRCGYC 1 cut(s) 1394
BssT1I CCWWGG 3 cut(s) 85, 441, 753
Bst2UI CCWGG 3 cut(s) 552, 1477, 1499
Bst4CI ACNGT 2 cut(s) 1279, 1343
Bst6I CTCTTC 3 cut(s) 567, 1116, 1404
BstACI GRCGYC 1 cut(s) 1394
BstAPI GCANNNNNTGC 3 cut(s) 293, 302, 1700
BstBAI YACGTR 1 cut(s) 1549
BstC8I GCNNGC 5 cut(s) 303, 396, 675, 1148, 1518
BstDEI CTNAG 4 cut(s) 390, 428, 774, 1172
BstDSI CCRYGG 3 cut(s) 441, 753, 1527
BstF5I GGATG 9 cut(s) 22, 145, 283, 565, 766, 1009, 1313, 1679, 1687
BstHHI GCGC 1 cut(s) 1786
BstKTI GATC 8 cut(s) 92, 610, 625, 923, 1009, 1214, 1274, 1492
BstMAI GTCTC 4 cut(s) 344, 462, 1247, 1361
BstMBI GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
BstMCI CGRYCG 1 cut(s) 1538
BstMWI GCNNNNNNNGC 7 cut(s) 293, 302, 395, 503, 638, 1640, 1700
BstNI CCWGG 3 cut(s) 552, 1477, 1499
BstNSI RCATGY 2 cut(s) 656, 1287
BstPAI GACNNNNGTC 1 cut(s) 1733
BstSCI CCNGG 3 cut(s) 550, 1475, 1497
BstV1I GCAGC 5 cut(s) 32, 280, 481, 1444, 1517
BstV2I GAAGAC 1 cut(s) 709
BstX2I RGATCY 2 cut(s) 1211, 1271
BstYI RGATCY 2 cut(s) 1211, 1271
BstZI CGGCCG 1 cut(s) 1535
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 3 cut(s) 1373, 1497, 1537
BtgI CCRYGG 3 cut(s) 441, 753, 1527
BtsCI GGATG 9 cut(s) 22, 145, 283, 565, 766, 1009, 1313, 1679, 1687
BtsI GCAGTG 2 cut(s) 296, 1141
BtsIMutI CAGTG 3 cut(s) 296, 727, 1141
Cac8I GCNNGC 5 cut(s) 303, 396, 675, 1148, 1518
CaiI CAGNNNCTG 1 cut(s) 1511
CciI TCATGA 3 cut(s) 382, 967, 1042
CfoI GCGC 1 cut(s) 1786
Cfr13I GGNCC 3 cut(s) 252, 554, 828
CseI GACGC 2 cut(s) 941, 1497
Csp6I GTAC 4 cut(s) 513, 1025, 1546, 1763
CspCI CAANNNNNGTGG 2 cut(s) 801, 836
CviQI GTAC 4 cut(s) 513, 1025, 1546, 1763
DdeI CTNAG 4 cut(s) 390, 428, 774, 1172
DpnI GATC 8 cut(s) 91, 609, 624, 922, 1008, 1213, 1273, 1491
DpnII GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
EaeI YGGCCR 1 cut(s) 1535
EagI CGGCCG 1 cut(s) 1535
Eam1104I CTCTTC 3 cut(s) 567, 1116, 1404
EarI CTCTTC 3 cut(s) 567, 1116, 1404
EciI GGCGGA 1 cut(s) 773
Ecl136II GAGCTC 2 cut(s) 436, 773
EclXI CGGCCG 1 cut(s) 1535
Eco130I CCWWGG 3 cut(s) 85, 441, 753
Eco24I GRGCYC 3 cut(s) 438, 775, 1104
Eco31I GGTCTC 2 cut(s) 462, 1361
Eco32I GATATC 1 cut(s) 1128
Eco47I GGWCC 3 cut(s) 252, 554, 828
Eco52I CGGCCG 1 cut(s) 1535
Eco53kI GAGCTC 2 cut(s) 436, 773
Eco57I CTGAAG 5 cut(s) 80, 440, 703, 1470, 1542
Eco88I CYCGRG 2 cut(s) 567, 1425
EcoICRI GAGCTC 2 cut(s) 436, 773
EcoRI GAATTC 2 cut(s) 1188, 1685
EcoRII CCWGG 3 cut(s) 550, 1475, 1497
EcoRV GATATC 1 cut(s) 1128
EcoT14I CCWWGG 3 cut(s) 85, 441, 753
EcoT22I ATGCAT 2 cut(s) 1230, 1289
EcoT38I GRGCYC 3 cut(s) 438, 775, 1104
ErhI CCWWGG 3 cut(s) 85, 441, 753
FalI AAGNNNNNCTT 2 cut(s) 849, 881
FaqI GGGAC 3 cut(s) 718, 1182, 1455
FauI CCCGC 1 cut(s) 1480
FbaI TGATCA 2 cut(s) 622, 1006
Fnu4HI GCNGC 7 cut(s) 21, 294, 495, 1433, 1506, 1535, 1644
FokI GGATG 9 cut(s) 29, 152, 290, 572, 773, 1016, 1300, 1686, 1694
FriOI GRGCYC 3 cut(s) 438, 775, 1104
Fsp4HI GCNGC 7 cut(s) 21, 294, 495, 1433, 1506, 1535, 1644
FspBI CTAG 6 cut(s) 86, 200, 357, 489, 803, 1731
GlaI GCGC 1 cut(s) 1785
GluI GCNGC 7 cut(s) 21, 294, 495, 1433, 1506, 1535, 1644
HaeIII GGCC 3 cut(s) 1373, 1497, 1537
HapII CCGG 3 cut(s) 557, 1209, 1538
HgaI GACGC 2 cut(s) 941, 1497
HhaI GCGC 1 cut(s) 1786
Hin1I GRCGYC 1 cut(s) 1394
Hin6I GCGC 1 cut(s) 1784
HinP1I GCGC 1 cut(s) 1784
HincII GTYRAC 1 cut(s) 686
HindII GTYRAC 1 cut(s) 686
HindIII AAGCTT 1 cut(s) 237
HinfI GANTC 6 cut(s) 164, 424, 530, 916, 941, 1031
HpaII CCGG 3 cut(s) 557, 1209, 1538
HphI GGTGA 4 cut(s) 1100, 1304, 1402, 1426
Hpy166II GTNNAC 2 cut(s) 686, 1763
Hpy188I TCNGA 8 cut(s) 99, 215, 650, 838, 925, 1132, 1349, 1691
Hpy188III TCNNGA 8 cut(s) 383, 557, 569, 626, 803, 968, 998, 1043
Hpy8I GTNNAC 2 cut(s) 686, 1763
HpyAV CCTTC 6 cut(s) 172, 747, 899, 1079, 1325, 1607
HpyCH4III ACNGT 2 cut(s) 1279, 1343
HpyCH4IV ACGT 3 cut(s) 1385, 1394, 1548
HpyF10VI GCNNNNNNNGC 7 cut(s) 293, 302, 395, 503, 638, 1640, 1700
HpyF3I CTNAG 4 cut(s) 390, 428, 774, 1172
HpySE526I ACGT 3 cut(s) 1385, 1394, 1548
Hsp92I GRCGYC 1 cut(s) 1394
HspAI GCGC 1 cut(s) 1784
Kpn2I TCCGGA 1 cut(s) 556
Ksp22I TGATCA 2 cut(s) 622, 1006
Kzo9I GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
LmnI GCTCC 6 cut(s) 32, 136, 770, 983, 1205, 1531
Lsp1109I GCAGC 5 cut(s) 32, 280, 481, 1444, 1517
LweI GCATC 7 cut(s) 7, 296, 916, 1147, 1247, 1703, 1771
MaeI CTAG 6 cut(s) 86, 200, 357, 489, 803, 1731
MaeII ACGT 3 cut(s) 1385, 1394, 1548
MaeIII GTNAC 6 cut(s) 63, 562, 579, 1279, 1390, 1726
MalI GATC 8 cut(s) 91, 609, 624, 922, 1008, 1213, 1273, 1491
MbiI CCGCTC 2 cut(s) 1071, 1534
MboI GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
MboII GAAGA 7 cut(s) 163, 433, 584, 709, 1103, 1133, 1421
MfeI CAATTG 1 cut(s) 507
MflI RGATCY 2 cut(s) 1211, 1271
MhlI GDGCHC 3 cut(s) 438, 775, 1104
MlyI GAGTC 1 cut(s) 925
MmeI TCCRAC 3 cut(s) 104, 673, 836
Mph1103I ATGCAT 2 cut(s) 1230, 1289
MroI TCCGGA 1 cut(s) 556
MroXI GAANNNNTTC 2 cut(s) 1188, 1656
MseI TTAA 4 cut(s) 156, 855, 1076, 1155
MslI CAYNNNNRTG 1 cut(s) 1047
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 3 cut(s) 557, 1209, 1538
MspR9I CCNGG 3 cut(s) 552, 1477, 1499
MunI CAATTG 1 cut(s) 507
MvaI CCWGG 3 cut(s) 552, 1477, 1499
MwoI GCNNNNNNNGC 7 cut(s) 293, 302, 395, 503, 638, 1640, 1700
NcoI CCATGG 2 cut(s) 441, 753
NdeII GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
NlaIV GGNNCC 4 cut(s) 1207, 1213, 1273, 1659
NmeAIII GCCGAG 2 cut(s) 1349, 1473
NmuCI GTSAC 4 cut(s) 63, 1279, 1390, 1726
NsiI ATGCAT 2 cut(s) 1230, 1289
NspI RCATGY 2 cut(s) 656, 1287
PaeR7I CTCGAG 1 cut(s) 567
PagI TCATGA 3 cut(s) 382, 967, 1042
PciI ACATGT 1 cut(s) 652
PcsI WCGNNNNNNNCGW 1 cut(s) 1391
PdmI GAANNNNTTC 2 cut(s) 1188, 1656
PfeI GAWTC 5 cut(s) 164, 424, 530, 941, 1031
PflMI CCANNNNNTGG 1 cut(s) 1757
PkrI GCNGC 7 cut(s) 22, 295, 496, 1434, 1507, 1536, 1645
PleI GAGTC 1 cut(s) 924
PpsI GAGTC 1 cut(s) 924
Ppu21I YACGTR 1 cut(s) 1549
PscI ACATGT 1 cut(s) 652
PshAI GACNNNNGTC 1 cut(s) 1733
PshBI ATTAAT 1 cut(s) 156
Psp124BI GAGCTC 2 cut(s) 438, 775
Psp6I CCWGG 3 cut(s) 550, 1475, 1497
PspGI CCWGG 3 cut(s) 550, 1475, 1497
PspN4I GGNNCC 4 cut(s) 1207, 1213, 1273, 1659
PspPI GGNCC 3 cut(s) 252, 554, 828
PstNI CAGNNNCTG 1 cut(s) 1511
PsuI RGATCY 2 cut(s) 1211, 1271
RsaI GTAC 4 cut(s) 514, 1026, 1547, 1764
RsaNI GTAC 4 cut(s) 513, 1025, 1546, 1763
RseI CAYNNNNRTG 1 cut(s) 1047
SacI GAGCTC 2 cut(s) 438, 775
SaqAI TTAA 4 cut(s) 156, 855, 1076, 1155
SatI GCNGC 7 cut(s) 21, 294, 495, 1433, 1506, 1535, 1644
Sau3AI GATC 8 cut(s) 89, 607, 622, 920, 1006, 1211, 1271, 1489
Sau96I GGNCC 3 cut(s) 252, 554, 828
SchI GAGTC 1 cut(s) 925
ScrFI CCNGG 3 cut(s) 552, 1477, 1499
SduI GDGCHC 3 cut(s) 438, 775, 1104
SfaNI GCATC 7 cut(s) 7, 296, 916, 1147, 1247, 1703, 1771
Sfr274I CTCGAG 1 cut(s) 567
SinI GGWCC 3 cut(s) 252, 554, 828
SlaI CTCGAG 1 cut(s) 567
SmiMI CAYNNNNRTG 1 cut(s) 1047
SmlI CTYRAG 3 cut(s) 347, 567, 996
SmoI CTYRAG 3 cut(s) 347, 567, 996
SpeI ACTAGT 1 cut(s) 1730
SsiI CCGC 7 cut(s) 23, 758, 1071, 1400, 1473, 1534, 1643
SspI AATATT 1 cut(s) 160
SspMI CTAG 6 cut(s) 86, 200, 357, 489, 803, 1731
SstI GAGCTC 2 cut(s) 438, 775
StyD4I CCNGG 3 cut(s) 550, 1475, 1497
StyI CCWWGG 3 cut(s) 85, 441, 753
TaaI ACNGT 2 cut(s) 1279, 1343
TaiI ACGT 3 cut(s) 1388, 1397, 1551
TaqI TCGA 4 cut(s) 568, 919, 1329, 1488
TatI WGTACW 2 cut(s) 1024, 1762
TauI GCSGC 2 cut(s) 1537, 1646
TfiI GAWTC 5 cut(s) 164, 424, 530, 941, 1031
Tru1I TTAA 4 cut(s) 156, 855, 1076, 1155
Tru9I TTAA 4 cut(s) 156, 855, 1076, 1155
TscAI CASTG 3 cut(s) 303, 727, 1148
TseFI GTSAC 4 cut(s) 63, 1279, 1390, 1726
TseI GCWGC 5 cut(s) 20, 293, 494, 1432, 1505
Tsp45I GTSAC 4 cut(s) 63, 1279, 1390, 1726
TspGWI ACGGA 2 cut(s) 608, 1544
TspRI CASTG 3 cut(s) 303, 727, 1148
Van91I CCANNNNNTGG 1 cut(s) 1757
VpaK11BI GGWCC 3 cut(s) 252, 554, 828
VspI ATTAAT 1 cut(s) 156
XapI RAATTY 6 cut(s) 41, 217, 542, 807, 1188, 1685
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 2 cut(s) 656, 1287
XhoI CTCGAG 1 cut(s) 567
XmaJI CCTAGG 1 cut(s) 85
XmnI GAANNNNTTC 2 cut(s) 1188, 1656
XspI CTAG 6 cut(s) 86, 200, 357, 489, 803, 1731
ZraI GACGTC 1 cut(s) 1395
Zsp2I ATGCAT 2 cut(s) 1230, 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.