Rmu_sc0006629.1_g000003

Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006629.1
OG0004805
Physical Location & Seq
Forward (+)
29537 .. 34449
4913 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1641 bp
atggctggtcttactcagcacccaattcttggaactaacgatactataaaggaggaggagaagaagaagcaagaagttgaccaaacaaagcctttgtctttagataaacttgagggtcaaactgagaaagacatggctccggtcaccggaagttcgattcaccggtcgggctctcggcctcagttggacctcagcaaagctgctattcagggaacttttgaagagagggaccctacaattctgttgcctaatcagtctgatcacttgtctcatctggctttggacattggaggatctctcatcaagttggtgtatttttctagacacgaagaccaatcaattgatgacaaaaggaagaaaactttgaaggagagactgggaatttccaatggtagtcgaagaagctaccctgttcttggtggaaggcttcattttgtgaagtttgagacgaccaagattaatgagtgcttagacttcatttattctaaacaacttcaccgtggagggatggatgttcgtatttggaatcctgatgccccaaccaatgaaaatgctgtaattaaggcaacaggtggtggagcttacaagtttgcagacctttttaaagaaaggcttggggttggtcttgacaaagaagatgaaatgaattgtcttgtagctggagcaaattttttactcaaggcaattcgacatgaagctttcacacatatggagggccagaaagagtttgtgcaaattgaccagaacgaattatatccctatcttcttgttaatattgggtccggtgttagtatgattaaggttgatggagaaggaaaatttcagcgagtaagtggaacaaatgtaggtggtggtacctattggggcttaggaaggctgttaacaaaatgcaaaagttttgacgagttgttagagcttagtcaaaggggagataataggactatagacatgcttgtaggggacatttatggcggtatggattactcaaagattggtctttcagcttcaaccattgcttctagttttgggaagactatttcagaaaacaaggagcttgaggactacagacctgaagatatatccctttctctcttacgaatgatttcttacaatattggtcagatatcttatttaaatgcactacgattcggtctcaaacggatattttttggagggttttttattagaggccatgcttataccatggacaccatctcctttgcagttcagttctggtcgaaaggagaggcacaggcaatgtttttgagacatgaagggtttctgggagcgttaggtgcatttatgagctatgaaaaacatggccttgatgacttgatggtccatcacttagttgaaaggtttcccatgggcgcaccatatacaggaggaaagattcatggtccaccactaggggatttgaatgagaagatttcatggatggagaagtttgttcggaaggggactgagatcaccgctccagtgccaatggatccacctggaactactggacttggaggctttgaagttccatcatccaaaggaggtaccctgcgctctgatgcaagtgctttaaacattggggttctccatctggtacccactttggaagtatttccattattggtggatcccaaatcgtaa

Protein Analysis

546

Amino Acids

60.4

Weight (kDa)

6.37

Isoelectric Point (pI)

31.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fumble PF03630 91 - 435 6.9e-138 Fumble
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1337
Acc65I GGTACC 3 cut(s) 854, 1544, 1594
AccB1I GGYRCC 3 cut(s) 854, 1544, 1594
AccB7I CCANNNNNTGG 1 cut(s) 29
AccBSI CCGCTC 1 cut(s) 1475
AciI CCGC 2 cut(s) 972, 1473
AclWI GGATC 5 cut(s) 301, 1484, 1497, 1622, 1635
AcsI RAATTY 3 cut(s) 381, 667, 818
AcuI CTGAAG 1 cut(s) 1092
AfaI GTAC 3 cut(s) 856, 1546, 1596
AfiI CCNNNNNNNGG 5 cut(s) 29, 146, 416, 1382, 1409
AgeI ACCGGT 1 cut(s) 162
AgsI TTSAA 6 cut(s) 221, 367, 1008, 1355, 1420, 1523
AjnI CCWGG 1 cut(s) 1495
AluBI AGCT 9 cut(s) 200, 405, 581, 659, 698, 916, 1004, 1054, 1308
AluI AGCT 9 cut(s) 200, 405, 581, 659, 698, 916, 1004, 1054, 1308
Alw26I GTCTC 5 cut(s) 273, 367, 440, 1157, 1261
AlwI GGATC 5 cut(s) 301, 1484, 1497, 1622, 1635
AoxI GGCC 4 cut(s) 176, 715, 1189, 1321
ApeKI GCWGC 1 cut(s) 200
ApoI RAATTY 3 cut(s) 381, 667, 818
ArsI GACNNNNNNTTYG 2 cut(s) 80, 112
AseI ATTAAT 1 cut(s) 459
AsiGI ACCGGT 1 cut(s) 162
Asp700I GAANNNNTTC 4 cut(s) 1102, 1278, 1359, 1611
Asp718I GGTACC 3 cut(s) 854, 1544, 1594
AspLEI GCGC 2 cut(s) 1373, 1554
AspS9I GGNCC 6 cut(s) 187, 229, 715, 780, 1339, 1400
AsuHPI GGTGA 4 cut(s) 136, 152, 488, 1462
AvaII GGWCC 5 cut(s) 187, 229, 780, 1339, 1400
BamHI GGATCC 2 cut(s) 1489, 1627
BanI GGYRCC 3 cut(s) 854, 1544, 1594
BanII GRGCYC 1 cut(s) 173
BbsI GAAGAC 2 cut(s) 336, 1037
BbvCI CCTCAGC 1 cut(s) 191
BbvI GCAGC 1 cut(s) 187
BccI CCATC 8 cut(s) 502, 800, 1220, 1330, 1350, 1432, 1537, 1596
BciT130I CCWGG 1 cut(s) 1497
BclI TGATCA 1 cut(s) 259
BcoDI GTCTC 5 cut(s) 273, 367, 440, 1157, 1261
BfaI CTAG 3 cut(s) 321, 1020, 1409
BfmI CTRYAG 2 cut(s) 942, 1063
BisI GCNGC 1 cut(s) 201
BlsI GCNGC 1 cut(s) 202
Bme1390I CCNGG 1 cut(s) 1497
Bme18I GGWCC 5 cut(s) 187, 229, 780, 1339, 1400
BmgT120I GGNCC 6 cut(s) 187, 229, 715, 780, 1339, 1400
BmiI GGNNCC 9 cut(s) 138, 230, 231, 781, 856, 1491, 1546, 1596, 1629
BmrFI CCNGG 1 cut(s) 1497
BmrI ACTGGG 1 cut(s) 386
BmsI GCATC 2 cut(s) 523, 1549
BmuI ACTGGG 1 cut(s) 386
BpiI GAAGAC 2 cut(s) 336, 1037
BplI GAGNNNNNCTC 2 cut(s) 282, 314
BpmI CTGGAG 2 cut(s) 681, 1461
Bpu10I CCTNAGC 2 cut(s) 191, 868
BpuEI CTTGAG 3 cut(s) 131, 662, 1076
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 3 cut(s) 499, 1203, 1365
BsaWI WCCGGW 4 cut(s) 139, 146, 162, 782
BsaXI ACNNNNNCTCC 2 cut(s) 1199, 1229
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 146, 416, 1382, 1409
Bse118I RCCGGY 1 cut(s) 162
Bse1I ACTGG 3 cut(s) 381, 1478, 1510
Bse3DI GCAATG 2 cut(s) 1011, 1263
BseBI CCWGG 1 cut(s) 1497
BseDI CCNNGG 3 cut(s) 499, 1203, 1365
BseGI GGATG 4 cut(s) 513, 517, 1443, 1532
BseLI CCNNNNNNNGG 5 cut(s) 29, 146, 416, 1382, 1409
BseMI GCAATG 2 cut(s) 1011, 1263
BseMII CTCAG 5 cut(s) 29, 114, 194, 205, 1455
BseNI ACTGG 3 cut(s) 381, 1478, 1510
BseRI GAGGAG 2 cut(s) 68, 71
BseXI GCAGC 1 cut(s) 187
Bsh1285I CGRYCG 1 cut(s) 167
BshFI GGCC 4 cut(s) 178, 717, 1191, 1323
BshNI GGYRCC 3 cut(s) 854, 1544, 1594
BshTI ACCGGT 1 cut(s) 162
BsiEI CGRYCG 1 cut(s) 167
BsiSI CCGG 4 cut(s) 140, 147, 163, 783
BslFI GGGAC 3 cut(s) 242, 974, 1474
BslI CCNNNNNNNGG 5 cut(s) 29, 146, 416, 1382, 1409
BsmAI GTCTC 5 cut(s) 273, 367, 440, 1157, 1261
BsmBI CGTCTC 1 cut(s) 440
BsmFI GGGAC 3 cut(s) 242, 974, 1474
BsnI GGCC 4 cut(s) 178, 717, 1191, 1323
Bso31I GGTCTC 1 cut(s) 1157
Bsp1286I GDGCHC 1 cut(s) 173
Bsp143I GATC 5 cut(s) 259, 293, 1467, 1489, 1627
Bsp19I CCATGG 2 cut(s) 1203, 1365
BspACI CCGC 2 cut(s) 972, 1473
BspANI GGCC 4 cut(s) 178, 717, 1191, 1323
BspCNI CTCAG 5 cut(s) 28, 115, 193, 204, 1456
BspLI GGNNCC 9 cut(s) 138, 230, 231, 781, 856, 1491, 1546, 1596, 1629
BspPI GGATC 5 cut(s) 301, 1484, 1497, 1622, 1635
BspT107I GGYRCC 3 cut(s) 854, 1544, 1594
BspTNI GGTCTC 1 cut(s) 1157
BsrBI CCGCTC 1 cut(s) 1475
BsrDI GCAATG 2 cut(s) 1011, 1263
BsrFI RCCGGY 1 cut(s) 162
BsrI ACTGG 3 cut(s) 381, 1478, 1510
BssAI RCCGGY 1 cut(s) 162
BssECI CCNNGG 3 cut(s) 499, 1203, 1365
BssMI GATC 5 cut(s) 259, 293, 1467, 1489, 1627
BssT1I CCWWGG 2 cut(s) 1203, 1365
Bst2UI CCWGG 1 cut(s) 1497
Bst4CI ACNGT 1 cut(s) 500
Bst6I CTCTTC 1 cut(s) 216
BstDEI CTNAG 9 cut(s) 15, 123, 180, 191, 469, 868, 917, 1348, 1464
BstDSI CCRYGG 3 cut(s) 499, 1203, 1365
BstEII GGTNACC 1 cut(s) 142
BstF5I GGATG 4 cut(s) 513, 517, 1443, 1532
BstHHI GCGC 2 cut(s) 1373, 1554
BstKTI GATC 5 cut(s) 262, 296, 1470, 1492, 1630
BstMAI GTCTC 5 cut(s) 273, 367, 440, 1157, 1261
BstMBI GATC 5 cut(s) 259, 293, 1467, 1489, 1627
BstMCI CGRYCG 1 cut(s) 167
BstMWI GCNNNNNNNGC 1 cut(s) 1295
BstNI CCWGG 1 cut(s) 1497
BstNSI RCATGY 1 cut(s) 952
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 1 cut(s) 1495
BstSFI CTRYAG 2 cut(s) 942, 1063
BstV1I GCAGC 1 cut(s) 187
BstV2I GAAGAC 2 cut(s) 336, 1037
BstX2I RGATCY 3 cut(s) 293, 1489, 1627
BstYI RGATCY 3 cut(s) 293, 1489, 1627
BsuRI GGCC 4 cut(s) 178, 717, 1191, 1323
BtgI CCRYGG 3 cut(s) 499, 1203, 1365
BtsCI GGATG 4 cut(s) 513, 517, 1443, 1532
BtsIMutI CAGTG 1 cut(s) 1485
CfoI GCGC 2 cut(s) 1373, 1554
Cfr10I RCCGGY 1 cut(s) 162
Cfr13I GGNCC 6 cut(s) 187, 229, 715, 780, 1339, 1400
Csp6I GTAC 3 cut(s) 855, 1545, 1595
CspAI ACCGGT 1 cut(s) 162
CviQI GTAC 3 cut(s) 855, 1545, 1595
DdeI CTNAG 9 cut(s) 15, 123, 180, 191, 469, 868, 917, 1348, 1464
DpnI GATC 5 cut(s) 261, 295, 1469, 1491, 1629
DpnII GATC 5 cut(s) 259, 293, 1467, 1489, 1627
DraI TTTAAA 3 cut(s) 604, 1134, 1572
DrdI GACNNNNNNGTC 1 cut(s) 1337
DseDI GACNNNNNNGTC 1 cut(s) 1337
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
Eco130I CCWWGG 2 cut(s) 1203, 1365
Eco24I GRGCYC 1 cut(s) 173
Eco31I GGTCTC 1 cut(s) 1157
Eco32I GATATC 1 cut(s) 1125
Eco47I GGWCC 5 cut(s) 187, 229, 780, 1339, 1400
Eco57I CTGAAG 1 cut(s) 1092
Eco91I GGTNACC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 229
EcoO65I GGTNACC 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 1495
EcoRV GATATC 1 cut(s) 1125
EcoT14I CCWWGG 2 cut(s) 1203, 1365
EcoT38I GRGCYC 1 cut(s) 173
ErhI CCWWGG 2 cut(s) 1203, 1365
Esp3I CGTCTC 1 cut(s) 440
FalI AAGNNNNNCTT 2 cut(s) 597, 629
FaqI GGGAC 3 cut(s) 242, 974, 1474
FauNDI CATATG 1 cut(s) 708
FbaI TGATCA 1 cut(s) 259
Fnu4HI GCNGC 1 cut(s) 201
FokI GGATG 4 cut(s) 520, 524, 1450, 1519
FriOI GRGCYC 1 cut(s) 173
Fsp4HI GCNGC 1 cut(s) 201
FspBI CTAG 3 cut(s) 321, 1020, 1409
GlaI GCGC 2 cut(s) 1372, 1553
GluI GCNGC 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 681, 1461
HaeIII GGCC 4 cut(s) 178, 717, 1191, 1323
HapII CCGG 4 cut(s) 140, 147, 163, 783
HhaI GCGC 2 cut(s) 1373, 1554
Hin6I GCGC 2 cut(s) 1371, 1552
HinP1I GCGC 2 cut(s) 1371, 1552
HincII GTYRAC 2 cut(s) 79, 882
HindII GTYRAC 2 cut(s) 79, 882
HindIII AAGCTT 1 cut(s) 696
HinfI GANTC 4 cut(s) 157, 526, 1146, 1393
HpaI GTTAAC 1 cut(s) 882
HpaII CCGG 4 cut(s) 140, 147, 163, 783
HphI GGTGA 4 cut(s) 136, 152, 488, 1462
Hpy166II GTNNAC 3 cut(s) 79, 882, 1403
Hpy188I TCNGA 5 cut(s) 259, 1042, 1122, 1455, 1558
Hpy188III TCNNGA 3 cut(s) 321, 530, 626
Hpy8I GTNNAC 3 cut(s) 79, 882, 1403
HpyAV CCTTC 6 cut(s) 361, 417, 806, 867, 1268, 1450
HpyCH4III ACNGT 1 cut(s) 500
HpyCH4V TGCA 7 cut(s) 593, 733, 891, 1139, 1223, 1298, 1562
HpyF10VI GCNNNNNNNGC 1 cut(s) 1295
HpyF3I CTNAG 9 cut(s) 15, 123, 180, 191, 469, 868, 917, 1348, 1464
HspAI GCGC 2 cut(s) 1371, 1552
KflI GGGWCCC 1 cut(s) 229
KpnI GGTACC 3 cut(s) 858, 1548, 1598
Ksp22I TGATCA 1 cut(s) 259
KspAI GTTAAC 1 cut(s) 882
Kzo9I GATC 5 cut(s) 259, 293, 1467, 1489, 1627
LmnI GCTCC 6 cut(s) 142, 578, 662, 1051, 1286, 1480
Lsp1109I GCAGC 1 cut(s) 187
LweI GCATC 2 cut(s) 523, 1549
MaeI CTAG 3 cut(s) 321, 1020, 1409
MaeIII GTNAC 1 cut(s) 142
MalI GATC 5 cut(s) 261, 295, 1469, 1491, 1629
MbiI CCGCTC 1 cut(s) 1475
MboI GATC 5 cut(s) 259, 293, 1467, 1489, 1627
MfeI CAATTG 1 cut(s) 339
MflI RGATCY 3 cut(s) 293, 1489, 1627
MhlI GDGCHC 1 cut(s) 173
MmeI TCCRAC 1 cut(s) 165
MroXI GAANNNNTTC 4 cut(s) 1102, 1278, 1359, 1611
MseI TTAA 8 cut(s) 459, 561, 603, 771, 798, 881, 1133, 1571
MslI CAYNNNNRTG 1 cut(s) 707
MspI CCGG 4 cut(s) 140, 147, 163, 783
MspR9I CCNGG 1 cut(s) 1497
MunI CAATTG 1 cut(s) 339
MvaI CCWGG 1 cut(s) 1497
MwoI GCNNNNNNNGC 1 cut(s) 1295
NcoI CCATGG 2 cut(s) 1203, 1365
NdeI CATATG 1 cut(s) 708
NdeII GATC 5 cut(s) 259, 293, 1467, 1489, 1627
NlaIV GGNNCC 9 cut(s) 138, 230, 231, 781, 856, 1491, 1546, 1596, 1629
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 1 cut(s) 142
NspI RCATGY 1 cut(s) 952
PdmI GAANNNNTTC 4 cut(s) 1102, 1278, 1359, 1611
PfeI GAWTC 4 cut(s) 157, 526, 1146, 1393
PflMI CCANNNNNTGG 1 cut(s) 29
PinAI ACCGGT 1 cut(s) 162
PkrI GCNGC 1 cut(s) 202
PpuMI RGGWCCY 1 cut(s) 229
PshBI ATTAAT 1 cut(s) 459
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 1 cut(s) 1495
PspEI GGTNACC 1 cut(s) 142
PspGI CCWGG 1 cut(s) 1495
PspN4I GGNNCC 9 cut(s) 138, 230, 231, 781, 856, 1491, 1546, 1596, 1629
PspPI GGNCC 6 cut(s) 187, 229, 715, 780, 1339, 1400
PspPPI RGGWCCY 1 cut(s) 229
PsrI GAACNNNNNNTAC 2 cut(s) 25, 57
PsuI RGATCY 3 cut(s) 293, 1489, 1627
RsaI GTAC 3 cut(s) 856, 1546, 1596
RsaNI GTAC 3 cut(s) 855, 1545, 1595
RseI CAYNNNNRTG 1 cut(s) 707
SaqAI TTAA 8 cut(s) 459, 561, 603, 771, 798, 881, 1133, 1571
SatI GCNGC 1 cut(s) 201
Sau3AI GATC 5 cut(s) 259, 293, 1467, 1489, 1627
Sau96I GGNCC 6 cut(s) 187, 229, 715, 780, 1339, 1400
ScrFI CCNGG 1 cut(s) 1497
SduI GDGCHC 1 cut(s) 173
SfaNI GCATC 2 cut(s) 523, 1549
SfcI CTRYAG 2 cut(s) 942, 1063
SinI GGWCC 5 cut(s) 187, 229, 780, 1339, 1400
SmiI ATTTAAAT 1 cut(s) 1134
SmiMI CAYNNNNRTG 1 cut(s) 707
SmlI CTYRAG 3 cut(s) 110, 677, 1055
SmoI CTYRAG 3 cut(s) 110, 677, 1055
SsiI CCGC 2 cut(s) 972, 1473
SspI AATATT 2 cut(s) 775, 1114
SspMI CTAG 3 cut(s) 321, 1020, 1409
StyD4I CCNGG 1 cut(s) 1495
StyI CCWWGG 2 cut(s) 1203, 1365
SwaI ATTTAAAT 1 cut(s) 1134
TaaI ACNGT 1 cut(s) 500
TaqI TCGA 4 cut(s) 155, 397, 688, 1238
TaqII GACCGA 1 cut(s) 1139
TfiI GAWTC 4 cut(s) 157, 526, 1146, 1393
Tru1I TTAA 8 cut(s) 459, 561, 603, 771, 798, 881, 1133, 1571
Tru9I TTAA 8 cut(s) 459, 561, 603, 771, 798, 881, 1133, 1571
TscAI CASTG 1 cut(s) 1485
TseFI GTSAC 1 cut(s) 142
TseI GCWGC 1 cut(s) 200
Tsp45I GTSAC 1 cut(s) 142
TspGWI ACGGA 1 cut(s) 1174
TspRI CASTG 1 cut(s) 1485
Van91I CCANNNNNTGG 1 cut(s) 29
VpaK11BI GGWCC 5 cut(s) 187, 229, 780, 1339, 1400
VspI ATTAAT 1 cut(s) 459
XapI RAATTY 3 cut(s) 381, 667, 818
XbaI TCTAGA 1 cut(s) 320
XceI RCATGY 1 cut(s) 952
XmnI GAANNNNTTC 4 cut(s) 1102, 1278, 1359, 1611
XspI CTAG 3 cut(s) 321, 1020, 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.