Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004805

Physical Location & Seq

Genomic Coordinates Forward (+)

10191971 .. 10202104

Gene Structure 10134 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG136800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGGCTGGTCTAACTCAGCACCCAATTCTTGGAACTAACGATACTATAAAGGAGGAGAAGCAAGAATTTGACCAAACAAAGCCTTTGTCTCTAGATAAAGTTGAGGGTCAAACTGAGAAAGACATGGCTCCGGTCACCGGAAGTTCGATTCACCGGTCGGGCTCTCGGCCTCAGTTGGACCTCAGCAAAGCTGCTATTCAGGGAACTTTTGAAGAGAGGGACCCTACAATTCTGTTGCCTAATCAGTCTGATCACTTGTCTCATCTGGCTCTGGACATTGGAGGATCTCTCATCAAGTTGGTGTATTTTTCTAGACACGAAGACCAATCAATTGATGACAAAAGGAAGAAAACTTTGAAGGATAGACTGGGAATTTCCAATGGTAGTCGAAGAAGCTACCCTGTTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAGACGACCAAGATTAATGAGTGCTTAGACTTCATTTATTCTAAACAACTTCACCGTGGAGGGATGGATGTTCGTATTTGGAATCCTGATGCCCCAACCAATGAAAATGCTGTAATTAAGGCAACAGGTGGTGGAGCTTACAAGTTTGCTGACCTTTTTAAGGAAAGGCTTGGGGTTGGTCTTGACAAAGAAGATGAAATGAATTGTCTTGTAGCTGGAGCAAATTTTTTACTCAAGGCAATTCGACATGAAGCTTTCACACATATGGAGGGCCAGAAAGAGTTTGTGCAAATTGACCAGAACGAATTATATCCCTATCTTCTTGTTAATATTGGGTCCGGTGTTAGTATGATTAAGGTTGATGGAGAAGGAAAATTTCAGCGAGTGAGTGGAACAAATGTAGGTGGTGGTACCTATTGGGGCTTAGGAAGGCTGTTAACAAAATGCAAAAGTTTTGACGAGTTGTTAGAGCTTAGTCAAAGGGGAGATAATAGGACTATAGACATGCTTGTAGGGGACATTTATGGCGGTATGGATTACTCAAAGATTGGTCTTTCAGCTTCAACCATTGCTTCTAGTTTTGGGAAGACTATTTCAGAAAACAAGGAGCTTGAGGACTACAGACCTGAAGATATATCCCTTTCTCTCTTACGAATGATTTCTTACAATATTGGCCAGATATCTTATTTAAATGCACTACGATTCGGTCTCAAACGGATATTTTTTGGAGGGTTTTTTATTAGAGGCCATGCTTATACCATGGACACCATCTCCTTTGCAGTTCAGTTCTGGTCGAAAGGAGAGGCACAGGCAATGTTTTTGAGACATGAAGGGTTTCTGGGAGCGTTAGGTGCATTTATGAGCTATGAAAAACATGGCCTTGATGACTTGATGGTCCATCACTTAGTTGAAAGGTTTCCCATGGGCGCACCATATACAGGAGGAAAGATTCATGGTCCACCACTTGGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTGTTCGGAAGGGGACTGAGATCACCGCTCCAGTGCCAATGGATCCACCTGGAACTACTGGACTTGGAGGCTTTGAAGTTCCATCATCCAAAGGAGGTACCCTGCGCTCTGATGCAAGTGCTTTAAACATTGGGGTTCTCCATCTGGTACCCACTTTGGAAGTATTTCCATTATTGGTGGATCCCAAAACGTATGAGCCTAACACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCACTGTTCTGTCCGGGCATCTGCCAGACCTTGTTGATAAGGCAGTGGCAAGTGAAGGTGGGACAGAAGATGCTAAAAGAAGGGGTGATGCCTTTGCTCGAGCTTTTTCTGCTCACTTGGCACGGTTAATGGAGGAGCCTGCTGCATATGGAAAGTTAGGGTTGGCCAATCTACTGGAACTCAGAGAAGAATGCTTAAGGGAGTTCCAATTTGTTGATTGTTATAGAAGTATAAAACAAAGGGAAAATGAGGCGTCGCTTGCTGTTTTACCTGACCTGCTCATGGAACTTGATAGTATGAGTGAGGAAACAAGAATGCTTTCCCTTATTGAAGGTGTTCTTGCTGCGAACATTTTTGACTGGGGGTCACGTGCCTGTGTGGATCTCTATCACAAAGGAACAATTATTGAAATTTACAGAATGAGTCGTGATAAAATGCACAGACCTTGGCGGGTGGATGATTTTGATGTCTTTCAAAAGAGAATGTTTGGATCTGGAGACAAGAAACCTCGCCCACATAAAAGAGCTTTGCTCTTTGTTGATAACTCAGGTGCTGACGTTGTTCTAGGAATGCTTCCCCTGGCACGGGAACTTCTCCGTCGTGGAACAGAGGTTGTTTTGGTTGCCAACTCCCTTCCAGCTTTAAATGATGTTACTGCCATGGAGCTTCCTGAGATCGTTGCTGAAGCTGCCAAGCATTGTGACATTCTTCGGAGAGCTGCTGAAGCGGGAGGCTTGCTCGTGGATGCGATGGTCAGCAACCTAGATGGTTCTAAAGGAAATTCATCATCGGTTCCATTAATGGTTGTTGAGAATGGCTGTGGCAGTCCTTGCATAGACTTGAGGCAGGTCAGCTCTGAGCTAGCAGCTGCTGCAAAAGAGGCTGATTTGATTATCTTGGAAGGCATGGGTAGAGCTCTTCATACCAACTTCAATGCCAGGTTTAAATGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGGTTGGCAGAGAAGTTGATTAAAGGAAACATATACGACTGTGTTTGCAGATATGAACCAGCGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004594 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

DUF89 Fumble

Protein Analysis

910

Amino Acids

100.74

Weight (kDa)

5.85

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fumble	PF03630	88 - 432	2.9e-137	Fumble
ARMT1-like_dom	PF01937	587 - 894	3.2e-44	Damage-control phosphatase ARMT1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32180 AT4G32180 AT4G32180
fragaria_vesca	FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350
malus_domestica	MD06G1173300.v1.1 MD14G1179800.v1.1
prunus_persica	Prupe.5G172800_v2.0.a1 Prupe.5G172800_v2.0.a1
pyrus_communis	pycom06g15440 pycom14g14960
rosa_chinensis	RchiOBHm_Chr7g0193481
rosa_laevigata	RLG00000004267
rosa_multiflora	Rmu_sc0006629.1_g000003 Rmu_sc0012783.1_g000004 Rmu_sc0031135.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262060
rosa_rugosa	Rorug07G0009700 Rorug07G0009700
rosa_samantha	Rh7AG136400 Rh7BG136800 Rh7CG140200 Rh7DG138000
rosa_wichuraiana	Rw7G011630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1328
Acc36I	ACCTGC	2 cut(s)	1965, 2518
Acc65I	GGTACC	3 cut(s)	845, 1535, 1585
AccB1I	GGYRCC	3 cut(s)	845, 1535, 1585
AccB7I	CCANNNNNTGG	2 cut(s)	29, 1400
AccBSI	CCGCTC	1 cut(s)	1466
AciI	CCGC	4 cut(s)	963, 1464, 2131, 2408
AclWI	GGATC	7 cut(s)	292, 1475, 1488, 1613, 1626, 2070, 2179
AcoI	YGGCCR	2 cut(s)	1108, 1845
AcsI	RAATTY	6 cut(s)	65, 372, 658, 809, 2091, 2461
AcuI	CTGAAG	3 cut(s)	1083, 2385, 2424
AcvI	CACGTG	1 cut(s)	2051
AcyI	GRCGYC	1 cut(s)	1934
AfaI	GTAC	3 cut(s)	847, 1537, 1587
AfiI	CCNNNNNNNGG	9 cut(s)	29, 137, 407, 595, 1373, 1400, 1963, 2265, 2266
AflII	CTTAAG	1 cut(s)	1876
AgeI	ACCGGT	1 cut(s)	153
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjnI	CCWGG	3 cut(s)	1486, 2259, 2618
Alw21I	GWGCWC	1 cut(s)	2599
Alw26I	GTCTC	6 cut(s)	93, 264, 431, 1148, 1252, 2172
AlwI	GGATC	7 cut(s)	292, 1475, 1488, 1613, 1626, 2070, 2179
AlwNI	CAGNNNCTG	2 cut(s)	2234, 2552
Ama87I	CYCGRG	1 cut(s)	1779
AoxI	GGCC	6 cut(s)	167, 706, 1108, 1180, 1312, 1845
ApeKI	GCWGC	8 cut(s)	191, 1823, 2024, 2369, 2399, 2546, 2549, 2552
ApoI	RAATTY	6 cut(s)	65, 372, 658, 809, 2091, 2461
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
AseI	ATTAAT	2 cut(s)	450, 2480
AsiGI	ACCGGT	1 cut(s)	153
Asp700I	GAANNNNTTC	6 cut(s)	1093, 1269, 1350, 1602, 1999, 2016
Asp718I	GGTACC	3 cut(s)	845, 1535, 1585
AspLEI	GCGC	2 cut(s)	1364, 1545
AspS9I	GGNCC	6 cut(s)	178, 220, 706, 771, 1330, 1391
AsuC2I	CCSGG	1 cut(s)	1696
AsuHPI	GGTGA	6 cut(s)	127, 143, 479, 1453, 1778, 2665
AsuNHI	GCTAGC	1 cut(s)	2542
AvaI	CYCGRG	1 cut(s)	1779
AvaII	GGWCC	5 cut(s)	178, 220, 771, 1330, 1391
BalI	TGGCCA	2 cut(s)	1110, 1847
BamHI	GGATCC	2 cut(s)	1480, 1618
BanI	GGYRCC	3 cut(s)	845, 1535, 1585
BanII	GRGCYC	2 cut(s)	164, 2599
BauI	CACGAG	1 cut(s)	2420
BbrPI	CACGTG	1 cut(s)	2051
BbsI	GAAGAC	2 cut(s)	327, 1028
Bbv12I	GWGCWC	1 cut(s)	2599
BbvCI	CCTCAGC	1 cut(s)	182
BbvI	GCAGC	8 cut(s)	178, 1810, 2011, 2356, 2386, 2536, 2539, 2558
BciT130I	CCWGG	3 cut(s)	1488, 2261, 2620
BclI	TGATCA	1 cut(s)	250
BcnI	CCSGG	1 cut(s)	1696
BcoDI	GTCTC	6 cut(s)	93, 264, 431, 1148, 1252, 2172
BfaI	CTAG	6 cut(s)	92, 312, 1011, 2246, 2444, 2543
BfmI	CTRYAG	2 cut(s)	933, 1054
BfrI	CTTAAG	1 cut(s)	1876
BfuAI	ACCTGC	2 cut(s)	1965, 2518
BisI	GCNGC	8 cut(s)	192, 1824, 2025, 2370, 2400, 2547, 2550, 2553
BlsI	GCNGC	8 cut(s)	193, 1825, 2026, 2371, 2401, 2548, 2551, 2554
Bme1390I	CCNGG	4 cut(s)	1488, 1696, 2261, 2620
Bme18I	GGWCC	5 cut(s)	178, 220, 771, 1330, 1391
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmeT110I	CYCGRG	1 cut(s)	1779
BmgT120I	GGNCC	6 cut(s)	178, 220, 706, 771, 1330, 1391
BmrFI	CCNGG	4 cut(s)	1488, 1696, 2261, 2620
BmrI	ACTGGG	2 cut(s)	377, 2050
BmsI	GCATC	7 cut(s)	514, 1540, 1708, 1741, 1759, 2416, 2623
BmtI	GCTAGC	1 cut(s)	2546
BmuI	ACTGGG	2 cut(s)	377, 2050
BpiI	GAAGAC	2 cut(s)	327, 1028
BplI	GAGNNNNNCTC	6 cut(s)	273, 305, 2196, 2228, 2403, 2435
BpmI	CTGGAG	3 cut(s)	672, 1452, 2196
Bpu10I	CCTNAGC	2 cut(s)	182, 859
BpuEI	CTTGAG	3 cut(s)	653, 1067, 2542
BpuMI	CCSGG	1 cut(s)	1696
BsaAI	YACGTR	1 cut(s)	2051
BsaBI	GATNNNNATC	1 cut(s)	2067
BsaHI	GRCGYC	1 cut(s)	1934
BsaI	GGTCTC	1 cut(s)	1148
BsaJI	CCNNGG	6 cut(s)	490, 1194, 1356, 2126, 2259, 2340
BsaWI	WCCGGW	4 cut(s)	130, 137, 153, 773
BsaXI	ACNNNNNCTCC	2 cut(s)	1190, 1220
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 137, 407, 595, 1373, 1400, 1963, 2265, 2266
Bse118I	RCCGGY	1 cut(s)	153
Bse1I	ACTGG	5 cut(s)	372, 1469, 1501, 1860, 2045
Bse3DI	GCAATG	3 cut(s)	1002, 1254, 2655
Bse8I	GATNNNNATC	1 cut(s)	2067
BseBI	CCWGG	3 cut(s)	1488, 2261, 2620
BseDI	CCNNGG	6 cut(s)	490, 1194, 1356, 2126, 2259, 2340
BseGI	GGATG	6 cut(s)	504, 508, 1434, 1523, 2143, 2431
BseJI	GATNNNNATC	1 cut(s)	2067
BseLI	CCNNNNNNNGG	9 cut(s)	29, 137, 407, 595, 1373, 1400, 1963, 2265, 2266
BseMI	GCAATG	3 cut(s)	1002, 1254, 2655
BseNI	ACTGG	5 cut(s)	372, 1469, 1501, 1860, 2045
BseRI	GAGGAG	2 cut(s)	68, 1829
BseXI	GCAGC	8 cut(s)	178, 1810, 2011, 2356, 2386, 2536, 2539, 2558
Bsh1285I	CGRYCG	1 cut(s)	158
BshFI	GGCC	6 cut(s)	169, 708, 1110, 1182, 1314, 1847
BshNI	GGYRCC	3 cut(s)	845, 1535, 1585
BshTI	ACCGGT	1 cut(s)	153
BsiEI	CGRYCG	1 cut(s)	158
BsiHKAI	GWGCWC	1 cut(s)	2599
BsiHKCI	CYCGRG	1 cut(s)	1779
BsiSI	CCGG	5 cut(s)	131, 138, 154, 774, 1695
BslFI	GGGAC	4 cut(s)	233, 965, 1465, 1756
BslI	CCNNNNNNNGG	9 cut(s)	29, 137, 407, 595, 1373, 1400, 1963, 2265, 2266
BsmAI	GTCTC	6 cut(s)	93, 264, 431, 1148, 1252, 2172
BsmBI	CGTCTC	1 cut(s)	431
BsmFI	GGGAC	4 cut(s)	233, 965, 1465, 1756
BsmI	GAATGC	3 cut(s)	1877, 2001, 2256
BsnI	GGCC	6 cut(s)	169, 708, 1110, 1182, 1314, 1847
Bso31I	GGTCTC	1 cut(s)	1148
BsoBI	CYCGRG	1 cut(s)	1779
Bsp1286I	GDGCHC	2 cut(s)	164, 2599
Bsp19I	CCATGG	3 cut(s)	1194, 1356, 2340
BspACI	CCGC	4 cut(s)	963, 1464, 2131, 2408
BspANI	GGCC	6 cut(s)	169, 708, 1110, 1182, 1314, 1847
BspMI	ACCTGC	2 cut(s)	1965, 2518
BspOI	GCTAGC	1 cut(s)	2546
BspPI	GGATC	7 cut(s)	292, 1475, 1488, 1613, 1626, 2070, 2179
BspQI	GCTCTTC	1 cut(s)	2604
BspT107I	GGYRCC	3 cut(s)	845, 1535, 1585
BspTI	CTTAAG	1 cut(s)	1876
BspTNI	GGTCTC	1 cut(s)	1148
BsrBI	CCGCTC	1 cut(s)	1466
BsrDI	GCAATG	3 cut(s)	1002, 1254, 2655
BsrFI	RCCGGY	1 cut(s)	153
BsrI	ACTGG	5 cut(s)	372, 1469, 1501, 1860, 2045
BssAI	RCCGGY	1 cut(s)	153
BssECI	CCNNGG	6 cut(s)	490, 1194, 1356, 2126, 2259, 2340
BssNI	GRCGYC	1 cut(s)	1934
BssSI	CACGAG	1 cut(s)	2420
BssT1I	CCWWGG	4 cut(s)	1194, 1356, 2126, 2340
Bst2BI	CACGAG	1 cut(s)	2420
Bst2UI	CCWGG	3 cut(s)	1488, 2261, 2620
Bst4CI	ACNGT	5 cut(s)	491, 1664, 1687, 1806, 2705
Bst6I	CTCTTC	2 cut(s)	207, 2604
BstACI	GRCGYC	1 cut(s)	1934
BstAFI	CTTAAG	1 cut(s)	1876
BstAPI	GCANNNNNTGC	2 cut(s)	2511, 2552
BstBAI	YACGTR	1 cut(s)	2051
BstC8I	GCNNGC	5 cut(s)	1821, 1941, 2417, 2544, 2646
BstDSI	CCRYGG	4 cut(s)	490, 1194, 1356, 2340
BstEII	GGTNACC	1 cut(s)	133
BstENI	CCTNNNNNAGG	1 cut(s)	593
BstF5I	GGATG	6 cut(s)	504, 508, 1434, 1523, 2143, 2431
BstHHI	GCGC	2 cut(s)	1364, 1545
BstMAI	GTCTC	6 cut(s)	93, 264, 431, 1148, 1252, 2172
BstMCI	CGRYCG	1 cut(s)	158
BstMWI	GCNNNNNNNGC	9 cut(s)	1286, 1790, 1799, 1940, 2369, 2405, 2511, 2552, 2561
BstNI	CCWGG	3 cut(s)	1488, 2261, 2620
BstNSI	RCATGY	1 cut(s)	943
BstPI	GGTNACC	1 cut(s)	133
BstSCI	CCNGG	4 cut(s)	1486, 1694, 2259, 2618
BstSFI	CTRYAG	2 cut(s)	933, 1054
BstV1I	GCAGC	8 cut(s)	178, 1810, 2011, 2356, 2386, 2536, 2539, 2558
BstV2I	GAAGAC	2 cut(s)	327, 1028
BstX2I	RGATCY	5 cut(s)	284, 1480, 1618, 2062, 2171
BstXI	CCANNNNNNTGG	1 cut(s)	1855
BstYI	RGATCY	5 cut(s)	284, 1480, 1618, 2062, 2171
BsuRI	GGCC	6 cut(s)	169, 708, 1110, 1182, 1314, 1847
BtgI	CCRYGG	4 cut(s)	490, 1194, 1356, 2340
BtgZI	GCGATG	1 cut(s)	2444
BtsCI	GGATG	6 cut(s)	504, 508, 1434, 1523, 2143, 2431
BtsI	GCAGTG	1 cut(s)	1731
BtsIMutI	CAGTG	4 cut(s)	1476, 1669, 1683, 1731
BveI	ACCTGC	2 cut(s)	1965, 2518
Cac8I	GCNNGC	5 cut(s)	1821, 1941, 2417, 2544, 2646
CaiI	CAGNNNCTG	2 cut(s)	2234, 2552
CfoI	GCGC	2 cut(s)	1364, 1545
Cfr10I	RCCGGY	1 cut(s)	153
Cfr13I	GGNCC	6 cut(s)	178, 220, 706, 771, 1330, 1391
CseI	GACGC	1 cut(s)	1923
Csp6I	GTAC	3 cut(s)	846, 1536, 1586
CspAI	ACCGGT	1 cut(s)	153
CviQI	GTAC	3 cut(s)	846, 1536, 1586
DraI	TTTAAA	4 cut(s)	1125, 1563, 2325, 2626
DrdI	GACNNNNNNGTC	1 cut(s)	1328
DriI	GACNNNNNGTC	1 cut(s)	2044
DseDI	GACNNNNNNGTC	1 cut(s)	1328
EaeI	YGGCCR	2 cut(s)	1108, 1845
Eam1104I	CTCTTC	2 cut(s)	207, 2604
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
EarI	CTCTTC	2 cut(s)	207, 2604
Ecl136II	GAGCTC	1 cut(s)	2597
Eco130I	CCWWGG	4 cut(s)	1194, 1356, 2126, 2340
Eco24I	GRGCYC	2 cut(s)	164, 2599
Eco31I	GGTCTC	1 cut(s)	1148
Eco32I	GATATC	1 cut(s)	1116
Eco47I	GGWCC	5 cut(s)	178, 220, 771, 1330, 1391
Eco53kI	GAGCTC	1 cut(s)	2597
Eco57I	CTGAAG	3 cut(s)	1083, 2385, 2424
Eco72I	CACGTG	1 cut(s)	2051
Eco88I	CYCGRG	1 cut(s)	1779
Eco91I	GGTNACC	1 cut(s)	133
EcoICRI	GAGCTC	1 cut(s)	2597
EcoNI	CCTNNNNNAGG	1 cut(s)	593
EcoO109I	RGGNCCY	1 cut(s)	220
EcoO65I	GGTNACC	1 cut(s)	133
EcoRII	CCWGG	3 cut(s)	1486, 2259, 2618
EcoRV	GATATC	1 cut(s)	1116
EcoT14I	CCWWGG	4 cut(s)	1194, 1356, 2126, 2340
EcoT38I	GRGCYC	2 cut(s)	164, 2599
ErhI	CCWWGG	4 cut(s)	1194, 1356, 2126, 2340
Esp3I	CGTCTC	1 cut(s)	431
FalI	AAGNNNNNCTT	2 cut(s)	2004, 2036
FaqI	GGGAC	4 cut(s)	233, 965, 1465, 1756
FauI	CCCGC	2 cut(s)	2124, 2401
FauNDI	CATATG	2 cut(s)	699, 1828
FbaI	TGATCA	1 cut(s)	250
Fnu4HI	GCNGC	8 cut(s)	192, 1824, 2025, 2370, 2400, 2547, 2550, 2553
FokI	GGATG	6 cut(s)	511, 515, 1441, 1510, 2150, 2438
FriOI	GRGCYC	2 cut(s)	164, 2599
Fsp4HI	GCNGC	8 cut(s)	192, 1824, 2025, 2370, 2400, 2547, 2550, 2553
FspBI	CTAG	6 cut(s)	92, 312, 1011, 2246, 2444, 2543
GlaI	GCGC	2 cut(s)	1363, 1544
GluI	GCNGC	8 cut(s)	192, 1824, 2025, 2370, 2400, 2547, 2550, 2553
GsuI	CTGGAG	3 cut(s)	672, 1452, 2196
HaeIII	GGCC	6 cut(s)	169, 708, 1110, 1182, 1314, 1847
HapII	CCGG	5 cut(s)	131, 138, 154, 774, 1695
HgaI	GACGC	1 cut(s)	1923
HhaI	GCGC	2 cut(s)	1364, 1545
Hin1I	GRCGYC	1 cut(s)	1934
Hin6I	GCGC	2 cut(s)	1362, 1543
HinP1I	GCGC	2 cut(s)	1362, 1543
HincII	GTYRAC	1 cut(s)	873
HindII	GTYRAC	1 cut(s)	873
HindIII	AAGCTT	2 cut(s)	687, 2642
HinfI	GANTC	5 cut(s)	148, 517, 1137, 1384, 2104
HpaI	GTTAAC	1 cut(s)	873
HpaII	CCGG	5 cut(s)	131, 138, 154, 774, 1695
HphI	GGTGA	6 cut(s)	127, 143, 479, 1453, 1778, 2665
Hpy166II	GTNNAC	3 cut(s)	873, 1394, 1683
Hpy188I	TCNGA	8 cut(s)	250, 1033, 1446, 1549, 1657, 1865, 2394, 2539
Hpy188III	TCNNGA	8 cut(s)	92, 272, 312, 521, 617, 2108, 2175, 2351
Hpy8I	GTNNAC	3 cut(s)	873, 1394, 1683
Hpy99I	CGWCG	2 cut(s)	1939, 2283
HpyCH4III	ACNGT	5 cut(s)	491, 1664, 1687, 1806, 2705
HpyCH4IV	ACGT	3 cut(s)	1628, 2050, 2238
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1286, 1790, 1799, 1940, 2369, 2405, 2511, 2552, 2561
HpySE526I	ACGT	3 cut(s)	1628, 2050, 2238
Hsp92I	GRCGYC	1 cut(s)	1934
HspAI	GCGC	2 cut(s)	1362, 1543
KflI	GGGWCCC	1 cut(s)	220
KpnI	GGTACC	3 cut(s)	849, 1539, 1589
Ksp22I	TGATCA	1 cut(s)	250
KspAI	GTTAAC	1 cut(s)	873
LguI	GCTCTTC	1 cut(s)	2604
LmnI	GCTCC	8 cut(s)	133, 569, 653, 1042, 1277, 1471, 1816, 2344
Lsp1109I	GCAGC	8 cut(s)	178, 1810, 2011, 2356, 2386, 2536, 2539, 2558
LweI	GCATC	7 cut(s)	514, 1540, 1708, 1741, 1759, 2416, 2623
MaeI	CTAG	6 cut(s)	92, 312, 1011, 2246, 2444, 2543
MaeII	ACGT	3 cut(s)	1628, 2050, 2238
MaeIII	GTNAC	4 cut(s)	133, 2046, 2332, 2381
MbiI	CCGCTC	1 cut(s)	1466
MfeI	CAATTG	1 cut(s)	330
MflI	RGATCY	5 cut(s)	284, 1480, 1618, 2062, 2171
MhlI	GDGCHC	2 cut(s)	164, 2599
MlsI	TGGCCA	2 cut(s)	1110, 1847
MluNI	TGGCCA	2 cut(s)	1110, 1847
MlyI	GAGTC	1 cut(s)	2113
MmeI	TCCRAC	1 cut(s)	156
Mox20I	TGGCCA	2 cut(s)	1110, 1847
MroXI	GAANNNNTTC	6 cut(s)	1093, 1269, 1350, 1602, 1999, 2016
MscI	TGGCCA	2 cut(s)	1110, 1847
MslI	CAYNNNNRTG	1 cut(s)	698
Msp20I	TGGCCA	2 cut(s)	1110, 1847
MspA1I	CMGCKG	1 cut(s)	2549
MspCI	CTTAAG	1 cut(s)	1876
MspI	CCGG	5 cut(s)	131, 138, 154, 774, 1695
MspR9I	CCNGG	4 cut(s)	1488, 1696, 2261, 2620
MunI	CAATTG	1 cut(s)	330
Mva1269I	GAATGC	3 cut(s)	1877, 2001, 2256
MvaI	CCWGG	3 cut(s)	1488, 2261, 2620
MwoI	GCNNNNNNNGC	9 cut(s)	1286, 1790, 1799, 1940, 2369, 2405, 2511, 2552, 2561
NciI	CCSGG	1 cut(s)	1696
NcoI	CCATGG	3 cut(s)	1194, 1356, 2340
NdeI	CATATG	2 cut(s)	699, 1828
NheI	GCTAGC	1 cut(s)	2542
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	3 cut(s)	133, 2046, 2381
NspI	RCATGY	1 cut(s)	943
PaeR7I	CTCGAG	1 cut(s)	1779
PciSI	GCTCTTC	1 cut(s)	2604
PctI	GAATGC	3 cut(s)	1877, 2001, 2256
PdmI	GAANNNNTTC	6 cut(s)	1093, 1269, 1350, 1602, 1999, 2016
PfeI	GAWTC	4 cut(s)	148, 517, 1137, 1384
PflMI	CCANNNNNTGG	2 cut(s)	29, 1400
PinAI	ACCGGT	1 cut(s)	153
PkrI	GCNGC	8 cut(s)	193, 1825, 2026, 2371, 2401, 2548, 2551, 2554
PleI	GAGTC	1 cut(s)	2112
PmaCI	CACGTG	1 cut(s)	2051
PmlI	CACGTG	1 cut(s)	2051
PpsI	GAGTC	1 cut(s)	2112
Ppu21I	YACGTR	1 cut(s)	2051
PpuMI	RGGWCCY	1 cut(s)	220
PshBI	ATTAAT	2 cut(s)	450, 2480
Psp124BI	GAGCTC	1 cut(s)	2599
Psp5II	RGGWCCY	1 cut(s)	220
Psp6I	CCWGG	3 cut(s)	1486, 2259, 2618
PspCI	CACGTG	1 cut(s)	2051
PspEI	GGTNACC	1 cut(s)	133
PspGI	CCWGG	3 cut(s)	1486, 2259, 2618
PspPI	GGNCC	6 cut(s)	178, 220, 706, 771, 1330, 1391
PspPPI	RGGWCCY	1 cut(s)	220
PspXI	VCTCGAGB	1 cut(s)	1779
PsrI	GAACNNNNNNTAC	2 cut(s)	25, 57
PstNI	CAGNNNCTG	2 cut(s)	2234, 2552
PsuI	RGATCY	5 cut(s)	284, 1480, 1618, 2062, 2171
PvuII	CAGCTG	1 cut(s)	2549
RsaI	GTAC	3 cut(s)	847, 1537, 1587
RsaNI	GTAC	3 cut(s)	846, 1536, 1586
RseI	CAYNNNNRTG	1 cut(s)	698
SacI	GAGCTC	1 cut(s)	2599
SapI	GCTCTTC	1 cut(s)	2604
SatI	GCNGC	8 cut(s)	192, 1824, 2025, 2370, 2400, 2547, 2550, 2553
Sau96I	GGNCC	6 cut(s)	178, 220, 706, 771, 1330, 1391
SchI	GAGTC	1 cut(s)	2113
ScrFI	CCNGG	4 cut(s)	1488, 1696, 2261, 2620
SduI	GDGCHC	2 cut(s)	164, 2599
SfaNI	GCATC	7 cut(s)	514, 1540, 1708, 1741, 1759, 2416, 2623
SfcI	CTRYAG	2 cut(s)	933, 1054
Sfr274I	CTCGAG	1 cut(s)	1779
SinI	GGWCC	5 cut(s)	178, 220, 771, 1330, 1391
SlaI	CTCGAG	1 cut(s)	1779
SmiI	ATTTAAAT	1 cut(s)	1125
SmiMI	CAYNNNNRTG	1 cut(s)	698
SmlI	CTYRAG	5 cut(s)	668, 1046, 1779, 1876, 2521
SmoI	CTYRAG	5 cut(s)	668, 1046, 1779, 1876, 2521
SsiI	CCGC	4 cut(s)	963, 1464, 2131, 2408
SspI	AATATT	2 cut(s)	766, 1105
SspMI	CTAG	6 cut(s)	92, 312, 1011, 2246, 2444, 2543
SstI	GAGCTC	1 cut(s)	2599
StyD4I	CCNGG	4 cut(s)	1486, 1694, 2259, 2618
StyI	CCWWGG	4 cut(s)	1194, 1356, 2126, 2340
SwaI	ATTTAAAT	1 cut(s)	1125
TaaI	ACNGT	5 cut(s)	491, 1664, 1687, 1806, 2705
TaiI	ACGT	3 cut(s)	1631, 2053, 2241
TaqI	TCGA	5 cut(s)	146, 388, 679, 1229, 1780
TaqII	GACCGA	1 cut(s)	1130
TfiI	GAWTC	4 cut(s)	148, 517, 1137, 1384
TscAI	CASTG	4 cut(s)	1476, 1669, 1690, 1731
TseFI	GTSAC	3 cut(s)	133, 2046, 2381
TseI	GCWGC	8 cut(s)	191, 1823, 2024, 2369, 2399, 2546, 2549, 2552
Tsp45I	GTSAC	3 cut(s)	133, 2046, 2381
TspGWI	ACGGA	2 cut(s)	1165, 2267
TspRI	CASTG	4 cut(s)	1476, 1669, 1690, 1731
Van91I	CCANNNNNTGG	2 cut(s)	29, 1400
Vha464I	CTTAAG	1 cut(s)	1876
VpaK11BI	GGWCC	5 cut(s)	178, 220, 771, 1330, 1391
VspI	ATTAAT	2 cut(s)	450, 2480
XagI	CCTNNNNNAGG	1 cut(s)	593
XapI	RAATTY	6 cut(s)	65, 372, 658, 809, 2091, 2461
XbaI	TCTAGA	2 cut(s)	91, 311
XceI	RCATGY	1 cut(s)	943
XhoI	CTCGAG	1 cut(s)	1779
XmnI	GAANNNNTTC	6 cut(s)	1093, 1269, 1350, 1602, 1999, 2016
XspI	CTAG	6 cut(s)	92, 312, 1011, 2246, 2444, 2543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.