Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004805

Physical Location & Seq

Genomic Coordinates Forward (+)

11381311 .. 11391479

Gene Structure 10169 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG140200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGGCTGGTCTTACTCAGCACCCAATTCTTGGAACTAACGATACTATAAAGGAGGAGGAGGAGAAGAAGAAGCAAGAATTTGACCAAACAAAGCCTTTGTCTTTGGATAAACTTGAGGGTCAAACTGAGAAAGACATGGCTCCGGTCACCGGAAGTTCGATTCACCGGTCGGGCTCTCGGCCTCAGTTGGACCTCAGCAAAGCTGCTATTCAGGGAACTTTTGAAGAGAGGGACCCTACAATTCTGTTGCCTAATCAGTCTGATCACTTGTCTCATCTGGCTTTGGACATTGGAGGATCTCTCATCAAGTTGGTGTATTTTTCTAGACACGAAGACCAATCAATTGATGACAAAAGGAAGAAAACTTTGAAGGAGAGACTGGGAATTTCCAATGGTAGTCGAAGAAGCTACCCTGTTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAGACGACCAAGATTAATGAGTGCTTAGACTTCATTTATTCTAAACAACTTCACCGTGGAGGGATGGATGCTCGTATTTGGAATCCTGACGCCCCAACCAATGAAAATGCTGTAATTAAGGCAACAGGTGGTGGAGCTTACAAGTTTGCAGACCTTTTTAAGGAAAGGCTTGGGGTTGGTCTTGACAAAGAAGATGAAATGAATTGTCTTGTAGCTGGAGCAAATTTTTTACTCAAGGCAATTCGACATGAAGCTTTCACACATATGGAGGGCCAGAAAGAGTTTGTGCAAATTGACCAGAACGAATTATATCCCTATCTTCTTGTTAATATTGGGTCCGGTGTTAGTATGATTAAGGTTGATGGAGAAGGAAAATTTCAGCGAGTAAGTGGAACAAATGTAGGTGGTGGTACCTATTGGGGCTTAGGAAGGCTGTTAACAAAATGCAAAAGTTTTGATGAGTTGTTAGAGCTTAGTCAAAGGGGAGATAATAGGACTATAGACATGCTTGTAGGGGACATTTATGGCGGTATGGATTACTCAAAGATTGGTCTTTCAGCTTCAACCATTGCTTCTAGTTTTGGGAAGACTATTTCAGAAAACAAGGAGCTTGAGGACTACAGACCAGAAGATATATCCCTTTCTCTCTTACGAATGATTTCTTACAATATTGGTCAGATATCTTATTTAAATGCACTACGATTCGGTCTCAAACGGATATTTTTTGGAGGGTTTTTTATTAGAGGCCATGCTTATACCATGGACACCATCTCCTTTGCAGTTCAGTTCTGGTCGAAAGGAGAGGCACAGGCAATGTTTTTGAGACATGAAGGGTTTCTGGGAGCGTTAGGTGCATTTATGAGCTATGAAAAACATGGCCTTGATGACTTGATGGTCCATCACTTAGTTGAAAGGTTTCCCATGGGCGCACCATATACAGGAGGAAAGATTCATGGTCCACCACTAGGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTGTTCGGAAGGGGACTGAGATCACCGCTCCAGTGCCAATGGATCCACCTGGAACTACTGGACTTGGAGGCTTTGAAGTTCCATCATCCAAAGGAGGTACCCTGCGCTCTGATGCAAGTGCTTTAAACATTGGGGTTCTCCATCTGGTACCCACTTTGGAAGTATTTCCATTATTGGTGGATCCCAAATCGTATGAGCCTAACACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCACTGTTCTGTCCGGGCATCTGCCAGACCTTGTTGATAAGGCAGTGGCAAGTGAAGGTGGGACAGAAGATGCTAAAAGAAGGGGTGATGCCTTTGCTCGAGCTTTTTCTGCTCACTTGGCACGGTTGATGGAGGAGCCTGCTGCATATGGAAAGTTAGGGTTGGCCAATCTACTGGAACTCAGAGAAGAATGCTTAAGGGAGTTCCAATTTGTTGATTGTTATAGAAGTATAAAACAAAGGGAAAATGAGGCGTCGCTTGCTGTTTTACCTGACCTGCTCATGGAACTTGATAGTATGAGTGAGGAAACAAGAATGCTTTCCCTTATTGAAGGTGTTCTTGCTGCGAACATTTTTGACTGGGGGTCACGTGCCTGTGTGGATCTCTATCACAAAGGAACAATTATTGAAATTTACAGAATGAGTCGTGATAAAATGCACAGACCTTGGCGTGTGGATGATTTTGATGTCTTTCAAAAGAGAATGTTTGGATCTAGAGACAAGAAACCTCGCCCACATAAAAGAGCTTTGCTCTTTGTTGATAACTCAGGTGCTGACGTTGTTCTAGGAATGCTTCCCCTGGCACGGGAACTTCTCCGTCGTGGAACAGAGGTTGTTTTGGTTGCCAACTCCCTTCCAGCTTTAAATGATGTTACTGCCATGGAGCTTCCTGAGATCGTTGCTGAAGCTGCCAAGCATTGTGACATTCTTCGGAGAGCTGCTGAAGCGGGAGGCTTGCTCGTGGATGCGATGATCAGCAACGTAGATGGTTCTAAAGGAAATCCATCATCGGTTCCATTAATGGTTGTTGAGAACGGCTGTGGCAGTCCTTGCATAGACTTGAGGCAGGTCAGCTCTGAGCTAGCAGCTGCAGCAAAAGAGGCTGATTTGATTATCTTGGAAGGCATGGGTAGAGCTCTTCATACCAACTTCAATGCCAGGTTTAAATGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGGTTGGCAGAGAAGTTGATTAAAGGAAACATATACGACTGTGTTTGCAGATATGAACCAGCGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004594 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

DUF89 Fumble

Protein Analysis

914

Amino Acids

101.35

Weight (kDa)

5.91

Isoelectric Point (pI)

37.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fumble	PF03630	92 - 436	1.8e-137	Fumble
ARMT1-like_dom	PF01937	591 - 898	7.9e-44	Damage-control phosphatase ARMT1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32180 AT4G32180 AT4G32180
fragaria_vesca	FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350
malus_domestica	MD06G1173300.v1.1 MD14G1179800.v1.1
prunus_persica	Prupe.5G172800_v2.0.a1 Prupe.5G172800_v2.0.a1
pyrus_communis	pycom06g15440 pycom14g14960
rosa_chinensis	RchiOBHm_Chr7g0193481
rosa_laevigata	RLG00000004267
rosa_multiflora	Rmu_sc0006629.1_g000003 Rmu_sc0012783.1_g000004 Rmu_sc0031135.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262060
rosa_rugosa	Rorug07G0009700 Rorug07G0009700
rosa_samantha	Rh7AG136400 Rh7BG136800 Rh7CG140200 Rh7DG138000
rosa_wichuraiana	Rw7G011630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1340
Acc36I	ACCTGC	2 cut(s)	1977, 2530
Acc65I	GGTACC	3 cut(s)	857, 1547, 1597
AccB1I	GGYRCC	3 cut(s)	857, 1547, 1597
AccB7I	CCANNNNNTGG	1 cut(s)	29
AccBSI	CCGCTC	1 cut(s)	1478
AciI	CCGC	3 cut(s)	975, 1476, 2420
AclWI	GGATC	7 cut(s)	304, 1487, 1500, 1625, 1638, 2082, 2191
AcoI	YGGCCR	1 cut(s)	1857
AcsI	RAATTY	5 cut(s)	77, 384, 670, 821, 2103
AcuI	CTGAAG	2 cut(s)	2397, 2436
AcvI	CACGTG	1 cut(s)	2063
AcyI	GRCGYC	2 cut(s)	537, 1946
AfaI	GTAC	3 cut(s)	859, 1549, 1599
AfiI	CCNNNNNNNGG	9 cut(s)	29, 149, 419, 607, 1385, 1412, 1975, 2277, 2278
AflII	CTTAAG	1 cut(s)	1888
AgeI	ACCGGT	1 cut(s)	165
AhdI	GACNNNNNGTC	1 cut(s)	2056
AjnI	CCWGG	3 cut(s)	1498, 2271, 2630
Alw21I	GWGCWC	1 cut(s)	2611
Alw26I	GTCTC	6 cut(s)	276, 370, 443, 1160, 1264, 2184
AlwI	GGATC	7 cut(s)	304, 1487, 1500, 1625, 1638, 2082, 2191
AlwNI	CAGNNNCTG	1 cut(s)	2246
Ama87I	CYCGRG	1 cut(s)	1791
AoxI	GGCC	5 cut(s)	179, 718, 1192, 1324, 1857
ApeKI	GCWGC	8 cut(s)	203, 1835, 2036, 2381, 2411, 2558, 2561, 2564
ApoI	RAATTY	5 cut(s)	77, 384, 670, 821, 2103
ArsI	GACNNNNNNTTYG	2 cut(s)	83, 115
AseI	ATTAAT	2 cut(s)	462, 2492
AsiGI	ACCGGT	1 cut(s)	165
Asp700I	GAANNNNTTC	6 cut(s)	1105, 1281, 1362, 1614, 2011, 2028
Asp718I	GGTACC	3 cut(s)	857, 1547, 1597
AspLEI	GCGC	2 cut(s)	1376, 1557
AspS9I	GGNCC	6 cut(s)	190, 232, 718, 783, 1342, 1403
AsuC2I	CCSGG	1 cut(s)	1708
AsuHPI	GGTGA	6 cut(s)	139, 155, 491, 1465, 1790, 2677
AsuNHI	GCTAGC	1 cut(s)	2554
AvaI	CYCGRG	1 cut(s)	1791
AvaII	GGWCC	5 cut(s)	190, 232, 783, 1342, 1403
BalI	TGGCCA	1 cut(s)	1859
BamHI	GGATCC	2 cut(s)	1492, 1630
BanI	GGYRCC	3 cut(s)	857, 1547, 1597
BanII	GRGCYC	2 cut(s)	176, 2611
BauI	CACGAG	1 cut(s)	2432
BbrPI	CACGTG	1 cut(s)	2063
BbsI	GAAGAC	2 cut(s)	339, 1040
Bbv12I	GWGCWC	1 cut(s)	2611
BbvCI	CCTCAGC	1 cut(s)	194
BbvI	GCAGC	8 cut(s)	190, 1822, 2023, 2368, 2398, 2548, 2570, 2576
BceAI	ACGGC	1 cut(s)	2524
BciT130I	CCWGG	3 cut(s)	1500, 2273, 2632
BclI	TGATCA	2 cut(s)	262, 2445
BcnI	CCSGG	1 cut(s)	1708
BcoDI	GTCTC	6 cut(s)	276, 370, 443, 1160, 1264, 2184
BfaI	CTAG	6 cut(s)	324, 1023, 1412, 2187, 2258, 2555
BfmI	CTRYAG	3 cut(s)	945, 1066, 2562
BfrI	CTTAAG	1 cut(s)	1888
BfuAI	ACCTGC	2 cut(s)	1977, 2530
BisI	GCNGC	8 cut(s)	204, 1836, 2037, 2382, 2412, 2559, 2562, 2565
BlsI	GCNGC	8 cut(s)	205, 1837, 2038, 2383, 2413, 2560, 2563, 2566
Bme1390I	CCNGG	4 cut(s)	1500, 1708, 2273, 2632
Bme18I	GGWCC	5 cut(s)	190, 232, 783, 1342, 1403
BmeRI	GACNNNNNGTC	1 cut(s)	2056
BmeT110I	CYCGRG	1 cut(s)	1791
BmgT120I	GGNCC	6 cut(s)	190, 232, 718, 783, 1342, 1403
BmrFI	CCNGG	4 cut(s)	1500, 1708, 2273, 2632
BmrI	ACTGGG	2 cut(s)	389, 2062
BmsI	GCATC	7 cut(s)	505, 1552, 1720, 1753, 1771, 2428, 2635
BmtI	GCTAGC	1 cut(s)	2558
BmuI	ACTGGG	2 cut(s)	389, 2062
BpiI	GAAGAC	2 cut(s)	339, 1040
BplI	GAGNNNNNCTC	6 cut(s)	285, 317, 2208, 2240, 2415, 2447
BpmI	CTGGAG	2 cut(s)	684, 1464
Bpu10I	CCTNAGC	2 cut(s)	194, 871
BpuEI	CTTGAG	4 cut(s)	134, 665, 1079, 2554
BpuMI	CCSGG	1 cut(s)	1708
BsaAI	YACGTR	1 cut(s)	2063
BsaBI	GATNNNNATC	1 cut(s)	2079
BsaHI	GRCGYC	2 cut(s)	537, 1946
BsaI	GGTCTC	1 cut(s)	1160
BsaJI	CCNNGG	6 cut(s)	502, 1206, 1368, 2138, 2271, 2352
BsaWI	WCCGGW	4 cut(s)	142, 149, 165, 785
BsaXI	ACNNNNNCTCC	2 cut(s)	1202, 1232
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 149, 419, 607, 1385, 1412, 1975, 2277, 2278
Bse118I	RCCGGY	1 cut(s)	165
Bse1I	ACTGG	5 cut(s)	384, 1481, 1513, 1872, 2057
Bse3DI	GCAATG	3 cut(s)	1014, 1266, 2667
Bse8I	GATNNNNATC	1 cut(s)	2079
BseBI	CCWGG	3 cut(s)	1500, 2273, 2632
BseDI	CCNNGG	6 cut(s)	502, 1206, 1368, 2138, 2271, 2352
BseGI	GGATG	6 cut(s)	516, 520, 1446, 1535, 2155, 2443
BseJI	GATNNNNATC	1 cut(s)	2079
BseLI	CCNNNNNNNGG	9 cut(s)	29, 149, 419, 607, 1385, 1412, 1975, 2277, 2278
BseMI	GCAATG	3 cut(s)	1014, 1266, 2667
BseNI	ACTGG	5 cut(s)	384, 1481, 1513, 1872, 2057
BseRI	GAGGAG	4 cut(s)	68, 71, 74, 1841
BseXI	GCAGC	8 cut(s)	190, 1822, 2023, 2368, 2398, 2548, 2570, 2576
Bsh1285I	CGRYCG	1 cut(s)	170
BshFI	GGCC	5 cut(s)	181, 720, 1194, 1326, 1859
BshNI	GGYRCC	3 cut(s)	857, 1547, 1597
BshTI	ACCGGT	1 cut(s)	165
BsiEI	CGRYCG	1 cut(s)	170
BsiHKAI	GWGCWC	1 cut(s)	2611
BsiHKCI	CYCGRG	1 cut(s)	1791
BsiSI	CCGG	5 cut(s)	143, 150, 166, 786, 1707
BslFI	GGGAC	4 cut(s)	245, 977, 1477, 1768
BslI	CCNNNNNNNGG	9 cut(s)	29, 149, 419, 607, 1385, 1412, 1975, 2277, 2278
BsmAI	GTCTC	6 cut(s)	276, 370, 443, 1160, 1264, 2184
BsmBI	CGTCTC	1 cut(s)	443
BsmFI	GGGAC	4 cut(s)	245, 977, 1477, 1768
BsmI	GAATGC	3 cut(s)	1889, 2013, 2268
BsnI	GGCC	5 cut(s)	181, 720, 1194, 1326, 1859
Bso31I	GGTCTC	1 cut(s)	1160
BsoBI	CYCGRG	1 cut(s)	1791
Bsp1286I	GDGCHC	2 cut(s)	176, 2611
Bsp19I	CCATGG	3 cut(s)	1206, 1368, 2352
BspACI	CCGC	3 cut(s)	975, 1476, 2420
BspANI	GGCC	5 cut(s)	181, 720, 1194, 1326, 1859
BspMAI	CTGCAG	1 cut(s)	2566
BspMI	ACCTGC	2 cut(s)	1977, 2530
BspOI	GCTAGC	1 cut(s)	2558
BspPI	GGATC	7 cut(s)	304, 1487, 1500, 1625, 1638, 2082, 2191
BspQI	GCTCTTC	1 cut(s)	2616
BspT107I	GGYRCC	3 cut(s)	857, 1547, 1597
BspTI	CTTAAG	1 cut(s)	1888
BspTNI	GGTCTC	1 cut(s)	1160
BsrBI	CCGCTC	1 cut(s)	1478
BsrDI	GCAATG	3 cut(s)	1014, 1266, 2667
BsrFI	RCCGGY	1 cut(s)	165
BsrI	ACTGG	5 cut(s)	384, 1481, 1513, 1872, 2057
BssAI	RCCGGY	1 cut(s)	165
BssECI	CCNNGG	6 cut(s)	502, 1206, 1368, 2138, 2271, 2352
BssNI	GRCGYC	2 cut(s)	537, 1946
BssSI	CACGAG	1 cut(s)	2432
BssT1I	CCWWGG	4 cut(s)	1206, 1368, 2138, 2352
Bst2BI	CACGAG	1 cut(s)	2432
Bst2UI	CCWGG	3 cut(s)	1500, 2273, 2632
Bst4CI	ACNGT	5 cut(s)	503, 1676, 1699, 1818, 2717
Bst6I	CTCTTC	2 cut(s)	219, 2616
BstACI	GRCGYC	2 cut(s)	537, 1946
BstAFI	CTTAAG	1 cut(s)	1888
BstAPI	GCANNNNNTGC	1 cut(s)	2523
BstBAI	YACGTR	1 cut(s)	2063
BstC8I	GCNNGC	5 cut(s)	1833, 1953, 2429, 2556, 2658
BstDSI	CCRYGG	4 cut(s)	502, 1206, 1368, 2352
BstEII	GGTNACC	1 cut(s)	145
BstENI	CCTNNNNNAGG	1 cut(s)	605
BstF5I	GGATG	6 cut(s)	516, 520, 1446, 1535, 2155, 2443
BstHHI	GCGC	2 cut(s)	1376, 1557
BstMAI	GTCTC	6 cut(s)	276, 370, 443, 1160, 1264, 2184
BstMCI	CGRYCG	1 cut(s)	170
BstMWI	GCNNNNNNNGC	9 cut(s)	1298, 1802, 1811, 1952, 2381, 2417, 2523, 2564, 2573
BstNI	CCWGG	3 cut(s)	1500, 2273, 2632
BstNSI	RCATGY	1 cut(s)	955
BstPI	GGTNACC	1 cut(s)	145
BstSCI	CCNGG	4 cut(s)	1498, 1706, 2271, 2630
BstSFI	CTRYAG	3 cut(s)	945, 1066, 2562
BstV1I	GCAGC	8 cut(s)	190, 1822, 2023, 2368, 2398, 2548, 2570, 2576
BstV2I	GAAGAC	2 cut(s)	339, 1040
BstX2I	RGATCY	5 cut(s)	296, 1492, 1630, 2074, 2183
BstXI	CCANNNNNNTGG	1 cut(s)	1867
BstYI	RGATCY	5 cut(s)	296, 1492, 1630, 2074, 2183
BsuRI	GGCC	5 cut(s)	181, 720, 1194, 1326, 1859
BtgI	CCRYGG	4 cut(s)	502, 1206, 1368, 2352
BtgZI	GCGATG	1 cut(s)	2456
BtsCI	GGATG	6 cut(s)	516, 520, 1446, 1535, 2155, 2443
BtsI	GCAGTG	1 cut(s)	1743
BtsIMutI	CAGTG	4 cut(s)	1488, 1681, 1695, 1743
BveI	ACCTGC	2 cut(s)	1977, 2530
Cac8I	GCNNGC	5 cut(s)	1833, 1953, 2429, 2556, 2658
CaiI	CAGNNNCTG	1 cut(s)	2246
CfoI	GCGC	2 cut(s)	1376, 1557
Cfr10I	RCCGGY	1 cut(s)	165
Cfr13I	GGNCC	6 cut(s)	190, 232, 718, 783, 1342, 1403
CseI	GACGC	2 cut(s)	545, 1935
Csp6I	GTAC	3 cut(s)	858, 1548, 1598
CspAI	ACCGGT	1 cut(s)	165
CviQI	GTAC	3 cut(s)	858, 1548, 1598
DraI	TTTAAA	4 cut(s)	1137, 1575, 2337, 2638
DrdI	GACNNNNNNGTC	1 cut(s)	1340
DriI	GACNNNNNGTC	1 cut(s)	2056
DseDI	GACNNNNNNGTC	1 cut(s)	1340
EaeI	YGGCCR	1 cut(s)	1857
Eam1104I	CTCTTC	2 cut(s)	219, 2616
Eam1105I	GACNNNNNGTC	1 cut(s)	2056
EarI	CTCTTC	2 cut(s)	219, 2616
Ecl136II	GAGCTC	1 cut(s)	2609
Eco130I	CCWWGG	4 cut(s)	1206, 1368, 2138, 2352
Eco24I	GRGCYC	2 cut(s)	176, 2611
Eco31I	GGTCTC	1 cut(s)	1160
Eco32I	GATATC	1 cut(s)	1128
Eco47I	GGWCC	5 cut(s)	190, 232, 783, 1342, 1403
Eco53kI	GAGCTC	1 cut(s)	2609
Eco57I	CTGAAG	2 cut(s)	2397, 2436
Eco72I	CACGTG	1 cut(s)	2063
Eco88I	CYCGRG	1 cut(s)	1791
Eco91I	GGTNACC	1 cut(s)	145
EcoICRI	GAGCTC	1 cut(s)	2609
EcoNI	CCTNNNNNAGG	1 cut(s)	605
EcoO109I	RGGNCCY	1 cut(s)	232
EcoO65I	GGTNACC	1 cut(s)	145
EcoRII	CCWGG	3 cut(s)	1498, 2271, 2630
EcoRV	GATATC	1 cut(s)	1128
EcoT14I	CCWWGG	4 cut(s)	1206, 1368, 2138, 2352
EcoT38I	GRGCYC	2 cut(s)	176, 2611
ErhI	CCWWGG	4 cut(s)	1206, 1368, 2138, 2352
Esp3I	CGTCTC	1 cut(s)	443
FalI	AAGNNNNNCTT	2 cut(s)	2016, 2048
FaqI	GGGAC	4 cut(s)	245, 977, 1477, 1768
FauI	CCCGC	1 cut(s)	2413
FauNDI	CATATG	2 cut(s)	711, 1840
FbaI	TGATCA	2 cut(s)	262, 2445
Fnu4HI	GCNGC	8 cut(s)	204, 1836, 2037, 2382, 2412, 2559, 2562, 2565
FokI	GGATG	6 cut(s)	523, 527, 1453, 1522, 2162, 2450
FriOI	GRGCYC	2 cut(s)	176, 2611
Fsp4HI	GCNGC	8 cut(s)	204, 1836, 2037, 2382, 2412, 2559, 2562, 2565
FspBI	CTAG	6 cut(s)	324, 1023, 1412, 2187, 2258, 2555
GlaI	GCGC	2 cut(s)	1375, 1556
GluI	GCNGC	8 cut(s)	204, 1836, 2037, 2382, 2412, 2559, 2562, 2565
GsuI	CTGGAG	2 cut(s)	684, 1464
HaeIII	GGCC	5 cut(s)	181, 720, 1194, 1326, 1859
HapII	CCGG	5 cut(s)	143, 150, 166, 786, 1707
HgaI	GACGC	2 cut(s)	545, 1935
HhaI	GCGC	2 cut(s)	1376, 1557
Hin1I	GRCGYC	2 cut(s)	537, 1946
Hin6I	GCGC	2 cut(s)	1374, 1555
HinP1I	GCGC	2 cut(s)	1374, 1555
HincII	GTYRAC	1 cut(s)	885
HindII	GTYRAC	1 cut(s)	885
HindIII	AAGCTT	2 cut(s)	699, 2654
HinfI	GANTC	5 cut(s)	160, 529, 1149, 1396, 2116
HpaI	GTTAAC	1 cut(s)	885
HpaII	CCGG	5 cut(s)	143, 150, 166, 786, 1707
HphI	GGTGA	6 cut(s)	139, 155, 491, 1465, 1790, 2677
Hpy166II	GTNNAC	3 cut(s)	885, 1406, 1695
Hpy188I	TCNGA	9 cut(s)	262, 1045, 1125, 1458, 1561, 1669, 1877, 2406, 2551
Hpy188III	TCNNGA	6 cut(s)	324, 533, 629, 2120, 2187, 2363
Hpy8I	GTNNAC	3 cut(s)	885, 1406, 1695
Hpy99I	CGWCG	2 cut(s)	1951, 2295
HpyCH4III	ACNGT	5 cut(s)	503, 1676, 1699, 1818, 2717
HpyCH4IV	ACGT	3 cut(s)	2062, 2250, 2454
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1298, 1802, 1811, 1952, 2381, 2417, 2523, 2564, 2573
HpySE526I	ACGT	3 cut(s)	2062, 2250, 2454
Hsp92I	GRCGYC	2 cut(s)	537, 1946
HspAI	GCGC	2 cut(s)	1374, 1555
KflI	GGGWCCC	1 cut(s)	232
KpnI	GGTACC	3 cut(s)	861, 1551, 1601
Ksp22I	TGATCA	2 cut(s)	262, 2445
KspAI	GTTAAC	1 cut(s)	885
LguI	GCTCTTC	1 cut(s)	2616
LmnI	GCTCC	8 cut(s)	145, 581, 665, 1054, 1289, 1483, 1828, 2356
Lsp1109I	GCAGC	8 cut(s)	190, 1822, 2023, 2368, 2398, 2548, 2570, 2576
LweI	GCATC	7 cut(s)	505, 1552, 1720, 1753, 1771, 2428, 2635
MaeI	CTAG	6 cut(s)	324, 1023, 1412, 2187, 2258, 2555
MaeII	ACGT	3 cut(s)	2062, 2250, 2454
MaeIII	GTNAC	4 cut(s)	145, 2058, 2344, 2393
MbiI	CCGCTC	1 cut(s)	1478
MfeI	CAATTG	1 cut(s)	342
MflI	RGATCY	5 cut(s)	296, 1492, 1630, 2074, 2183
MhlI	GDGCHC	2 cut(s)	176, 2611
MlsI	TGGCCA	1 cut(s)	1859
MluNI	TGGCCA	1 cut(s)	1859
MlyI	GAGTC	1 cut(s)	2125
MmeI	TCCRAC	1 cut(s)	168
Mox20I	TGGCCA	1 cut(s)	1859
MroXI	GAANNNNTTC	6 cut(s)	1105, 1281, 1362, 1614, 2011, 2028
MscI	TGGCCA	1 cut(s)	1859
MslI	CAYNNNNRTG	1 cut(s)	710
Msp20I	TGGCCA	1 cut(s)	1859
MspA1I	CMGCKG	1 cut(s)	2561
MspCI	CTTAAG	1 cut(s)	1888
MspI	CCGG	5 cut(s)	143, 150, 166, 786, 1707
MspR9I	CCNGG	4 cut(s)	1500, 1708, 2273, 2632
MunI	CAATTG	1 cut(s)	342
Mva1269I	GAATGC	3 cut(s)	1889, 2013, 2268
MvaI	CCWGG	3 cut(s)	1500, 2273, 2632
MwoI	GCNNNNNNNGC	9 cut(s)	1298, 1802, 1811, 1952, 2381, 2417, 2523, 2564, 2573
NciI	CCSGG	1 cut(s)	1708
NcoI	CCATGG	3 cut(s)	1206, 1368, 2352
NdeI	CATATG	2 cut(s)	711, 1840
NheI	GCTAGC	1 cut(s)	2554
NmeAIII	GCCGAG	1 cut(s)	157
NmuCI	GTSAC	3 cut(s)	145, 2058, 2393
NspI	RCATGY	1 cut(s)	955
PaeR7I	CTCGAG	1 cut(s)	1791
PciSI	GCTCTTC	1 cut(s)	2616
PctI	GAATGC	3 cut(s)	1889, 2013, 2268
PdmI	GAANNNNTTC	6 cut(s)	1105, 1281, 1362, 1614, 2011, 2028
PfeI	GAWTC	4 cut(s)	160, 529, 1149, 1396
PflMI	CCANNNNNTGG	1 cut(s)	29
PinAI	ACCGGT	1 cut(s)	165
PkrI	GCNGC	8 cut(s)	205, 1837, 2038, 2383, 2413, 2560, 2563, 2566
PleI	GAGTC	1 cut(s)	2124
PmaCI	CACGTG	1 cut(s)	2063
PmlI	CACGTG	1 cut(s)	2063
PpsI	GAGTC	1 cut(s)	2124
Ppu21I	YACGTR	1 cut(s)	2063
PpuMI	RGGWCCY	1 cut(s)	232
PshBI	ATTAAT	2 cut(s)	462, 2492
Psp124BI	GAGCTC	1 cut(s)	2611
Psp5II	RGGWCCY	1 cut(s)	232
Psp6I	CCWGG	3 cut(s)	1498, 2271, 2630
PspCI	CACGTG	1 cut(s)	2063
PspEI	GGTNACC	1 cut(s)	145
PspGI	CCWGG	3 cut(s)	1498, 2271, 2630
PspPI	GGNCC	6 cut(s)	190, 232, 718, 783, 1342, 1403
PspPPI	RGGWCCY	1 cut(s)	232
PspXI	VCTCGAGB	1 cut(s)	1791
PsrI	GAACNNNNNNTAC	2 cut(s)	25, 57
PstI	CTGCAG	1 cut(s)	2566
PstNI	CAGNNNCTG	1 cut(s)	2246
PsuI	RGATCY	5 cut(s)	296, 1492, 1630, 2074, 2183
PvuII	CAGCTG	1 cut(s)	2561
RsaI	GTAC	3 cut(s)	859, 1549, 1599
RsaNI	GTAC	3 cut(s)	858, 1548, 1598
RseI	CAYNNNNRTG	1 cut(s)	710
SacI	GAGCTC	1 cut(s)	2611
SapI	GCTCTTC	1 cut(s)	2616
SatI	GCNGC	8 cut(s)	204, 1836, 2037, 2382, 2412, 2559, 2562, 2565
Sau96I	GGNCC	6 cut(s)	190, 232, 718, 783, 1342, 1403
SchI	GAGTC	1 cut(s)	2125
ScrFI	CCNGG	4 cut(s)	1500, 1708, 2273, 2632
SduI	GDGCHC	2 cut(s)	176, 2611
SfaNI	GCATC	7 cut(s)	505, 1552, 1720, 1753, 1771, 2428, 2635
SfcI	CTRYAG	3 cut(s)	945, 1066, 2562
Sfr274I	CTCGAG	1 cut(s)	1791
SinI	GGWCC	5 cut(s)	190, 232, 783, 1342, 1403
SlaI	CTCGAG	1 cut(s)	1791
SmiI	ATTTAAAT	1 cut(s)	1137
SmiMI	CAYNNNNRTG	1 cut(s)	710
SmlI	CTYRAG	6 cut(s)	113, 680, 1058, 1791, 1888, 2533
SmoI	CTYRAG	6 cut(s)	113, 680, 1058, 1791, 1888, 2533
SsiI	CCGC	3 cut(s)	975, 1476, 2420
SspI	AATATT	2 cut(s)	778, 1117
SspMI	CTAG	6 cut(s)	324, 1023, 1412, 2187, 2258, 2555
SstI	GAGCTC	1 cut(s)	2611
StyD4I	CCNGG	4 cut(s)	1498, 1706, 2271, 2630
StyI	CCWWGG	4 cut(s)	1206, 1368, 2138, 2352
SwaI	ATTTAAAT	1 cut(s)	1137
TaaI	ACNGT	5 cut(s)	503, 1676, 1699, 1818, 2717
TaiI	ACGT	3 cut(s)	2065, 2253, 2457
TaqI	TCGA	5 cut(s)	158, 400, 691, 1241, 1792
TaqII	GACCGA	1 cut(s)	1142
TfiI	GAWTC	4 cut(s)	160, 529, 1149, 1396
TscAI	CASTG	4 cut(s)	1488, 1681, 1702, 1743
TseFI	GTSAC	3 cut(s)	145, 2058, 2393
TseI	GCWGC	8 cut(s)	203, 1835, 2036, 2381, 2411, 2558, 2561, 2564
Tsp45I	GTSAC	3 cut(s)	145, 2058, 2393
TspGWI	ACGGA	2 cut(s)	1177, 2279
TspRI	CASTG	4 cut(s)	1488, 1681, 1702, 1743
Van91I	CCANNNNNTGG	1 cut(s)	29
Vha464I	CTTAAG	1 cut(s)	1888
VpaK11BI	GGWCC	5 cut(s)	190, 232, 783, 1342, 1403
VspI	ATTAAT	2 cut(s)	462, 2492
XagI	CCTNNNNNAGG	1 cut(s)	605
XapI	RAATTY	5 cut(s)	77, 384, 670, 821, 2103
XbaI	TCTAGA	2 cut(s)	323, 2186
XceI	RCATGY	1 cut(s)	955
XhoI	CTCGAG	1 cut(s)	1791
XmnI	GAANNNNTTC	6 cut(s)	1105, 1281, 1362, 1614, 2011, 2028
XspI	CTAG	6 cut(s)	324, 1023, 1412, 2187, 2258, 2555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.