Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004805

Physical Location & Seq

Genomic Coordinates Forward (+)

10901388 .. 10910585

Gene Structure 9198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G011630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGGCTGGTCTTACTCAGCACCCAATTCTTGGAACTAACGATACTATAAAAGGAGGAGGAGAAGAAGAAAAAGACATGGCTCCGGTCACCGGAAGTTCGATTCACCGGTCGGGCTCTCGGCCTCAGTTGGACCTCAGCAAAGCTGCTATTCAGGGAACTTTTGAAGAGAGGGACCCTACAATTCTGTTGCCTAATCAGTCTGATCACTTGTCTCATCTGGCTTTGGACATTGGAGGATCTCTCATCAAGTTGGTGTATTTTTCTAGACACGAAGACCAATCAATTGATGACAAAAGGAAGAAAACTTTGAAGGAGAGACTGGGAATTTCCAATGGTAGTCGAAGAAGCTACCCTGTTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAGACGACCAAGATTAATGAGTGCTTAGACTTCATTTATTCTAAACAACTTCACCGTGGAGGGATGGATGTTCGTATTTGGAATCCTGATGCCCCAACCAATGAAAATGCTGTAATTAAGGTATTATATGTGCTTTATCAAACATCTTTGCTTGGGGTTGGTCTTGACAAAGAAGATGAAATGAATTGTCTTGTAGCTGGAGCAAATTTTTTACTCAAGGCAATTCGACATGAAGCTTTCACACATATGGAGGGCCAGAAAGAGTTTGTGCAAATTGACCAGAACGAATTATATCCCTATCTTCTTGTTAATATTGGGTCCGGTGTTAGTATGATTAAGGTTGATGGAGAAGGAAAATTTCAGCGAGTAAGTGGAACAAATGTAGGTGGTGGTACCTATTGGGGCTTAGGAAGGCTGTTAACAAAATGCAAAAGTTTTGACGAGTTGTTAGAGCTTAGTCAAAGGGGAGATAATAGGACTATAGACATGCTTGTAGGGGACATTTATGGCGGTATGGATTACTCAAAGATTGGTCTTTCAGCTTCAACCATTGCTTCTAGTTTTGGGAAGACTATTTCAGAAAACAAGGAGCTTGAGGACTACAGACCTGAAGATATATCCCTTTCTCTCTTACGAATGATTTCTTACAATATTGGTCAGATATCTTATTTAAATGCACTACGATTCGGTCTCAAACGGATATTTTTTGGAGGGTTTTTTATTAGAGGCCATGCTTATACCATGGACACCATCTCCTTTGCAGTTCAGTTCTGGTCGAAAGGAGAGGCACAGGCAATGTTTTTGAGACATGAAGGGTTTCTGGGAGCGTTAGGTGCATTTATGAGCTATGAAAAACATGGCCTTGATGACTTGATGGTCCATCACTTAGTTGAAAGGTTTCCCATGGGCGCACCATATACAGGAGGAAAGATTCATGGTCCGCCACTAGGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTGTTCGGAAGGGGACTGAGATCACCGCTCCAGTGCCAATGGATCCACCTGGAACTACTGGACTTGGAGGCTTTGAAGTTCCATCATCCAAAGGAGGTACCCTGCGCTCTGATGCAAGTGCTTTAAACATTGGGGTTCTCCATCTGGTACCCACTTTGGAAGTATTTCCATTATTGGTGGATCCCAAATCGTATGAGCCTAACACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCACTGTTCTGTCCGGGCATCTGCCAGACCTTGTTGATAAGGCAGTGGCAAGTGAAGGTGGGACAGAAGATGCTAAAAGAAGGGGTGATGCCTTTGCTCGAGCTTTTTCTGCTCACTTGGCACGGTTGATGGAGGAGCCTGCTGCATATGGAAAGTTAGGGTTGGCCAATCTACTGGAACTCAGAGAAGAATGCTTAAGGGAGTTCCAATTTGTTGATTGTTATAGAAGTATAAAACAAAGGGAAAATGAGGCGTCACTTGCTGTTTTACCTGACCTGCTCATGGAACTTGATAGTATGAGTGAGGAAACAAGAATGCTTTCCCTTATTGAAGGTGTTCTTGCTGCGAACATTTTTGACTGGGGGTCACGTGCCTGTGTGGATCTCTATCACAAAGGAACAATTATTGAAATTTACAGAATGAGTCGTGATAAAATGCACAGACCTTGGCGGGTGGATGATTTTGATGTCTTTCAAAAGAGAATGTTTGGATCTAGAGACAAGAAACCTCGCCCACATAAAAGAGCTTTGCTCTTTGTCGATAACTCAGGTGCTGACGTTGTTCTAGGAATGCTTCCCCTGGCACGGGAACTTCTCCGTCGTGGAACAGAGGTTGTTTTGGTTGCCAACTCCCTTCCAGCTTTAAATGATGTTACTGCCATGGAGCTTCCTGAGATCGTTGCTGAAGCTGCCAAGCATTGTGACATTCTTCGGAGAGCTGCTGAAGCGGGAGGCTTGCTCGTGGATGCGATGATCAGCAACCTAGATGGTTCTAAAGGAAATCCATCATCGGTTCCATTAATGGTTGTTGAGAACGGCTGTGGCAGTCCTTGCATAGACTTGAGGCAGGTCAGCTCTGAGCTAGCAGCTGCTGCAAAAGAGGCTGATTTGATTATCTTGGAAGGCATGGGTAGAGCTCTTCATACCAACTTCAATGCCAGGTTTAAATGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGGTTGGCAGAGAAGTTGATTAAAGGAAACATATACGACTGTGTTTGCAGATATGAACCAGCGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004594 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

DUF89 Fumble

Protein Analysis

888

Amino Acids

98.32

Weight (kDa)

5.9

Isoelectric Point (pI)

37.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fumble	PF03630	72 - 410	1.7e-125	Fumble
ARMT1-like_dom	PF01937	565 - 872	5.3e-44	Damage-control phosphatase ARMT1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32180 AT4G32180 AT4G32180
fragaria_vesca	FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350 FvH4_5g05350
malus_domestica	MD06G1173300.v1.1 MD14G1179800.v1.1
prunus_persica	Prupe.5G172800_v2.0.a1 Prupe.5G172800_v2.0.a1
pyrus_communis	pycom06g15440 pycom14g14960
rosa_chinensis	RchiOBHm_Chr7g0193481
rosa_laevigata	RLG00000004267
rosa_multiflora	Rmu_sc0006629.1_g000003 Rmu_sc0012783.1_g000004 Rmu_sc0031135.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262060
rosa_rugosa	Rorug07G0009700 Rorug07G0009700
rosa_samantha	Rh7AG136400 Rh7BG136800 Rh7CG140200 Rh7DG138000
rosa_wichuraiana	Rw7G011630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1262
Acc36I	ACCTGC	2 cut(s)	1899, 2452
Acc65I	GGTACC	3 cut(s)	779, 1469, 1519
AccB1I	GGYRCC	3 cut(s)	779, 1469, 1519
AccB7I	CCANNNNNTGG	1 cut(s)	29
AccBSI	CCGCTC	1 cut(s)	1400
AciI	CCGC	5 cut(s)	897, 1328, 1398, 2065, 2342
AclWI	GGATC	7 cut(s)	244, 1409, 1422, 1547, 1560, 2004, 2113
AcoI	YGGCCR	1 cut(s)	1779
AcsI	RAATTY	4 cut(s)	324, 592, 743, 2025
AcuI	CTGAAG	3 cut(s)	1017, 2319, 2358
AcvI	CACGTG	1 cut(s)	1985
AcyI	GRCGYC	1 cut(s)	1868
AfaI	GTAC	3 cut(s)	781, 1471, 1521
AfiI	CCNNNNNNNGG	8 cut(s)	29, 89, 359, 1307, 1334, 1897, 2199, 2200
AflII	CTTAAG	1 cut(s)	1810
AgeI	ACCGGT	1 cut(s)	105
AhdI	GACNNNNNGTC	1 cut(s)	1978
AjnI	CCWGG	3 cut(s)	1420, 2193, 2552
Alw21I	GWGCWC	1 cut(s)	2533
Alw26I	GTCTC	6 cut(s)	216, 310, 383, 1082, 1186, 2106
AlwI	GGATC	7 cut(s)	244, 1409, 1422, 1547, 1560, 2004, 2113
AlwNI	CAGNNNCTG	2 cut(s)	2168, 2486
Ama87I	CYCGRG	1 cut(s)	1713
AoxI	GGCC	5 cut(s)	119, 640, 1114, 1246, 1779
ApeKI	GCWGC	8 cut(s)	143, 1757, 1958, 2303, 2333, 2480, 2483, 2486
ApoI	RAATTY	4 cut(s)	324, 592, 743, 2025
AseI	ATTAAT	2 cut(s)	402, 2414
AsiGI	ACCGGT	1 cut(s)	105
Asp700I	GAANNNNTTC	6 cut(s)	1027, 1203, 1284, 1536, 1933, 1950
Asp718I	GGTACC	3 cut(s)	779, 1469, 1519
AspLEI	GCGC	2 cut(s)	1298, 1479
AspS9I	GGNCC	6 cut(s)	130, 172, 640, 705, 1264, 1325
AsuC2I	CCSGG	1 cut(s)	1630
AsuHPI	GGTGA	6 cut(s)	79, 95, 431, 1387, 1712, 2599
AsuNHI	GCTAGC	1 cut(s)	2476
AvaI	CYCGRG	1 cut(s)	1713
AvaII	GGWCC	5 cut(s)	130, 172, 705, 1264, 1325
BalI	TGGCCA	1 cut(s)	1781
BamHI	GGATCC	2 cut(s)	1414, 1552
BanI	GGYRCC	3 cut(s)	779, 1469, 1519
BanII	GRGCYC	2 cut(s)	116, 2533
BauI	CACGAG	1 cut(s)	2354
BbrPI	CACGTG	1 cut(s)	1985
BbsI	GAAGAC	2 cut(s)	279, 962
Bbv12I	GWGCWC	1 cut(s)	2533
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	8 cut(s)	130, 1744, 1945, 2290, 2320, 2470, 2473, 2492
BceAI	ACGGC	1 cut(s)	2446
BciT130I	CCWGG	3 cut(s)	1422, 2195, 2554
BclI	TGATCA	2 cut(s)	202, 2367
BcnI	CCSGG	1 cut(s)	1630
BcoDI	GTCTC	6 cut(s)	216, 310, 383, 1082, 1186, 2106
BfaI	CTAG	7 cut(s)	264, 945, 1334, 2109, 2180, 2378, 2477
BfmI	CTRYAG	2 cut(s)	867, 988
BfrI	CTTAAG	1 cut(s)	1810
BfuAI	ACCTGC	2 cut(s)	1899, 2452
BisI	GCNGC	8 cut(s)	144, 1758, 1959, 2304, 2334, 2481, 2484, 2487
BlsI	GCNGC	8 cut(s)	145, 1759, 1960, 2305, 2335, 2482, 2485, 2488
Bme1390I	CCNGG	4 cut(s)	1422, 1630, 2195, 2554
Bme18I	GGWCC	5 cut(s)	130, 172, 705, 1264, 1325
BmeRI	GACNNNNNGTC	1 cut(s)	1978
BmeT110I	CYCGRG	1 cut(s)	1713
BmgT120I	GGNCC	6 cut(s)	130, 172, 640, 705, 1264, 1325
BmrFI	CCNGG	4 cut(s)	1422, 1630, 2195, 2554
BmrI	ACTGGG	2 cut(s)	329, 1984
BmsI	GCATC	7 cut(s)	466, 1474, 1642, 1675, 1693, 2350, 2557
BmtI	GCTAGC	1 cut(s)	2480
BmuI	ACTGGG	2 cut(s)	329, 1984
BpiI	GAAGAC	2 cut(s)	279, 962
BplI	GAGNNNNNCTC	6 cut(s)	225, 257, 2130, 2162, 2337, 2369
BpmI	CTGGAG	2 cut(s)	606, 1386
Bpu10I	CCTNAGC	2 cut(s)	134, 793
BpuEI	CTTGAG	3 cut(s)	587, 1001, 2476
BpuMI	CCSGG	1 cut(s)	1630
BsaAI	YACGTR	1 cut(s)	1985
BsaBI	GATNNNNATC	1 cut(s)	2001
BsaHI	GRCGYC	1 cut(s)	1868
BsaI	GGTCTC	1 cut(s)	1082
BsaJI	CCNNGG	6 cut(s)	442, 1128, 1290, 2060, 2193, 2274
BsaWI	WCCGGW	4 cut(s)	82, 89, 105, 707
BsaXI	ACNNNNNCTCC	2 cut(s)	1124, 1154
Bsc4I	CCNNNNNNNGG	8 cut(s)	29, 89, 359, 1307, 1334, 1897, 2199, 2200
Bse118I	RCCGGY	1 cut(s)	105
Bse1I	ACTGG	5 cut(s)	324, 1403, 1435, 1794, 1979
Bse3DI	GCAATG	3 cut(s)	936, 1188, 2589
Bse8I	GATNNNNATC	1 cut(s)	2001
BseBI	CCWGG	3 cut(s)	1422, 2195, 2554
BseDI	CCNNGG	6 cut(s)	442, 1128, 1290, 2060, 2193, 2274
BseGI	GGATG	6 cut(s)	456, 460, 1368, 1457, 2077, 2365
BseJI	GATNNNNATC	1 cut(s)	2001
BseLI	CCNNNNNNNGG	8 cut(s)	29, 89, 359, 1307, 1334, 1897, 2199, 2200
BseMI	GCAATG	3 cut(s)	936, 1188, 2589
BseMII	CTCAG	9 cut(s)	29, 137, 148, 1380, 1602, 1810, 2175, 2277, 2463
BseNI	ACTGG	5 cut(s)	324, 1403, 1435, 1794, 1979
BseRI	GAGGAG	3 cut(s)	69, 72, 1763
BseXI	GCAGC	8 cut(s)	130, 1744, 1945, 2290, 2320, 2470, 2473, 2492
Bsh1285I	CGRYCG	1 cut(s)	110
BshFI	GGCC	5 cut(s)	121, 642, 1116, 1248, 1781
BshNI	GGYRCC	3 cut(s)	779, 1469, 1519
BshTI	ACCGGT	1 cut(s)	105
BsiEI	CGRYCG	1 cut(s)	110
BsiHKAI	GWGCWC	1 cut(s)	2533
BsiHKCI	CYCGRG	1 cut(s)	1713
BsiSI	CCGG	5 cut(s)	83, 90, 106, 708, 1629
BslFI	GGGAC	4 cut(s)	185, 899, 1399, 1690
BslI	CCNNNNNNNGG	8 cut(s)	29, 89, 359, 1307, 1334, 1897, 2199, 2200
BsmAI	GTCTC	6 cut(s)	216, 310, 383, 1082, 1186, 2106
BsmBI	CGTCTC	1 cut(s)	383
BsmFI	GGGAC	4 cut(s)	185, 899, 1399, 1690
BsmI	GAATGC	3 cut(s)	1811, 1935, 2190
BsnI	GGCC	5 cut(s)	121, 642, 1116, 1248, 1781
Bso31I	GGTCTC	1 cut(s)	1082
BsoBI	CYCGRG	1 cut(s)	1713
Bsp1286I	GDGCHC	2 cut(s)	116, 2533
Bsp19I	CCATGG	3 cut(s)	1128, 1290, 2274
BspACI	CCGC	5 cut(s)	897, 1328, 1398, 2065, 2342
BspANI	GGCC	5 cut(s)	121, 642, 1116, 1248, 1781
BspCNI	CTCAG	9 cut(s)	28, 136, 147, 1381, 1601, 1809, 2174, 2278, 2464
BspMI	ACCTGC	2 cut(s)	1899, 2452
BspOI	GCTAGC	1 cut(s)	2480
BspPI	GGATC	7 cut(s)	244, 1409, 1422, 1547, 1560, 2004, 2113
BspQI	GCTCTTC	1 cut(s)	2538
BspT107I	GGYRCC	3 cut(s)	779, 1469, 1519
BspTI	CTTAAG	1 cut(s)	1810
BspTNI	GGTCTC	1 cut(s)	1082
BsrBI	CCGCTC	1 cut(s)	1400
BsrDI	GCAATG	3 cut(s)	936, 1188, 2589
BsrFI	RCCGGY	1 cut(s)	105
BsrI	ACTGG	5 cut(s)	324, 1403, 1435, 1794, 1979
BssAI	RCCGGY	1 cut(s)	105
BssECI	CCNNGG	6 cut(s)	442, 1128, 1290, 2060, 2193, 2274
BssNI	GRCGYC	1 cut(s)	1868
BssSI	CACGAG	1 cut(s)	2354
BssT1I	CCWWGG	4 cut(s)	1128, 1290, 2060, 2274
Bst2BI	CACGAG	1 cut(s)	2354
Bst2UI	CCWGG	3 cut(s)	1422, 2195, 2554
Bst4CI	ACNGT	5 cut(s)	443, 1598, 1621, 1740, 2639
Bst6I	CTCTTC	2 cut(s)	159, 2538
BstACI	GRCGYC	1 cut(s)	1868
BstAFI	CTTAAG	1 cut(s)	1810
BstAPI	GCANNNNNTGC	2 cut(s)	2445, 2486
BstBAI	YACGTR	1 cut(s)	1985
BstC8I	GCNNGC	4 cut(s)	1755, 2351, 2478, 2580
BstDSI	CCRYGG	4 cut(s)	442, 1128, 1290, 2274
BstEII	GGTNACC	1 cut(s)	85
BstF5I	GGATG	6 cut(s)	456, 460, 1368, 1457, 2077, 2365
BstHHI	GCGC	2 cut(s)	1298, 1479
BstMAI	GTCTC	6 cut(s)	216, 310, 383, 1082, 1186, 2106
BstMCI	CGRYCG	1 cut(s)	110
BstMWI	GCNNNNNNNGC	9 cut(s)	1220, 1724, 1733, 1874, 2303, 2339, 2445, 2486, 2495
BstNI	CCWGG	3 cut(s)	1422, 2195, 2554
BstNSI	RCATGY	1 cut(s)	877
BstPI	GGTNACC	1 cut(s)	85
BstSCI	CCNGG	4 cut(s)	1420, 1628, 2193, 2552
BstSFI	CTRYAG	2 cut(s)	867, 988
BstV1I	GCAGC	8 cut(s)	130, 1744, 1945, 2290, 2320, 2470, 2473, 2492
BstV2I	GAAGAC	2 cut(s)	279, 962
BstX2I	RGATCY	5 cut(s)	236, 1414, 1552, 1996, 2105
BstXI	CCANNNNNNTGG	1 cut(s)	1789
BstYI	RGATCY	5 cut(s)	236, 1414, 1552, 1996, 2105
BsuRI	GGCC	5 cut(s)	121, 642, 1116, 1248, 1781
BtgI	CCRYGG	4 cut(s)	442, 1128, 1290, 2274
BtgZI	GCGATG	1 cut(s)	2378
BtsCI	GGATG	6 cut(s)	456, 460, 1368, 1457, 2077, 2365
BtsI	GCAGTG	1 cut(s)	1665
BtsIMutI	CAGTG	4 cut(s)	1410, 1603, 1617, 1665
BveI	ACCTGC	2 cut(s)	1899, 2452
Cac8I	GCNNGC	4 cut(s)	1755, 2351, 2478, 2580
CaiI	CAGNNNCTG	2 cut(s)	2168, 2486
CfoI	GCGC	2 cut(s)	1298, 1479
Cfr10I	RCCGGY	1 cut(s)	105
Cfr13I	GGNCC	6 cut(s)	130, 172, 640, 705, 1264, 1325
CseI	GACGC	1 cut(s)	1857
Csp6I	GTAC	3 cut(s)	780, 1470, 1520
CspAI	ACCGGT	1 cut(s)	105
CviQI	GTAC	3 cut(s)	780, 1470, 1520
DraI	TTTAAA	4 cut(s)	1059, 1497, 2259, 2560
DrdI	GACNNNNNNGTC	1 cut(s)	1262
DriI	GACNNNNNGTC	1 cut(s)	1978
DseDI	GACNNNNNNGTC	1 cut(s)	1262
EaeI	YGGCCR	1 cut(s)	1779
Eam1104I	CTCTTC	2 cut(s)	159, 2538
Eam1105I	GACNNNNNGTC	1 cut(s)	1978
EarI	CTCTTC	2 cut(s)	159, 2538
EciI	GGCGGA	1 cut(s)	1317
Ecl136II	GAGCTC	1 cut(s)	2531
Eco130I	CCWWGG	4 cut(s)	1128, 1290, 2060, 2274
Eco24I	GRGCYC	2 cut(s)	116, 2533
Eco31I	GGTCTC	1 cut(s)	1082
Eco32I	GATATC	1 cut(s)	1050
Eco47I	GGWCC	5 cut(s)	130, 172, 705, 1264, 1325
Eco53kI	GAGCTC	1 cut(s)	2531
Eco57I	CTGAAG	3 cut(s)	1017, 2319, 2358
Eco72I	CACGTG	1 cut(s)	1985
Eco88I	CYCGRG	1 cut(s)	1713
Eco91I	GGTNACC	1 cut(s)	85
EcoICRI	GAGCTC	1 cut(s)	2531
EcoO109I	RGGNCCY	1 cut(s)	172
EcoO65I	GGTNACC	1 cut(s)	85
EcoRII	CCWGG	3 cut(s)	1420, 2193, 2552
EcoRV	GATATC	1 cut(s)	1050
EcoT14I	CCWWGG	4 cut(s)	1128, 1290, 2060, 2274
EcoT38I	GRGCYC	2 cut(s)	116, 2533
ErhI	CCWWGG	4 cut(s)	1128, 1290, 2060, 2274
Esp3I	CGTCTC	1 cut(s)	383
FalI	AAGNNNNNCTT	2 cut(s)	1938, 1970
FaqI	GGGAC	4 cut(s)	185, 899, 1399, 1690
FauI	CCCGC	2 cut(s)	2058, 2335
FauNDI	CATATG	2 cut(s)	633, 1762
FbaI	TGATCA	2 cut(s)	202, 2367
Fnu4HI	GCNGC	8 cut(s)	144, 1758, 1959, 2304, 2334, 2481, 2484, 2487
FokI	GGATG	6 cut(s)	463, 467, 1375, 1444, 2084, 2372
FriOI	GRGCYC	2 cut(s)	116, 2533
Fsp4HI	GCNGC	8 cut(s)	144, 1758, 1959, 2304, 2334, 2481, 2484, 2487
FspBI	CTAG	7 cut(s)	264, 945, 1334, 2109, 2180, 2378, 2477
GlaI	GCGC	2 cut(s)	1297, 1478
GluI	GCNGC	8 cut(s)	144, 1758, 1959, 2304, 2334, 2481, 2484, 2487
GsuI	CTGGAG	2 cut(s)	606, 1386
HaeIII	GGCC	5 cut(s)	121, 642, 1116, 1248, 1781
HapII	CCGG	5 cut(s)	83, 90, 106, 708, 1629
HgaI	GACGC	1 cut(s)	1857
HhaI	GCGC	2 cut(s)	1298, 1479
Hin1I	GRCGYC	1 cut(s)	1868
Hin6I	GCGC	2 cut(s)	1296, 1477
HinP1I	GCGC	2 cut(s)	1296, 1477
HincII	GTYRAC	1 cut(s)	807
HindII	GTYRAC	1 cut(s)	807
HindIII	AAGCTT	2 cut(s)	621, 2576
HinfI	GANTC	5 cut(s)	100, 469, 1071, 1318, 2038
HpaI	GTTAAC	1 cut(s)	807
HpaII	CCGG	5 cut(s)	83, 90, 106, 708, 1629
HphI	GGTGA	6 cut(s)	79, 95, 431, 1387, 1712, 2599
Hpy166II	GTNNAC	2 cut(s)	807, 1617
Hpy188I	TCNGA	9 cut(s)	202, 967, 1047, 1380, 1483, 1591, 1799, 2328, 2473
Hpy188III	TCNNGA	6 cut(s)	264, 473, 551, 2042, 2109, 2285
Hpy8I	GTNNAC	2 cut(s)	807, 1617
Hpy99I	CGWCG	1 cut(s)	2217
HpyCH4III	ACNGT	5 cut(s)	443, 1598, 1621, 1740, 2639
HpyCH4IV	ACGT	2 cut(s)	1984, 2172
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1220, 1724, 1733, 1874, 2303, 2339, 2445, 2486, 2495
HpySE526I	ACGT	2 cut(s)	1984, 2172
Hsp92I	GRCGYC	1 cut(s)	1868
HspAI	GCGC	2 cut(s)	1296, 1477
KflI	GGGWCCC	1 cut(s)	172
KpnI	GGTACC	3 cut(s)	783, 1473, 1523
Ksp22I	TGATCA	2 cut(s)	202, 2367
KspAI	GTTAAC	1 cut(s)	807
LguI	GCTCTTC	1 cut(s)	2538
LmnI	GCTCC	7 cut(s)	85, 587, 976, 1211, 1405, 1750, 2278
Lsp1109I	GCAGC	8 cut(s)	130, 1744, 1945, 2290, 2320, 2470, 2473, 2492
LweI	GCATC	7 cut(s)	466, 1474, 1642, 1675, 1693, 2350, 2557
MaeI	CTAG	7 cut(s)	264, 945, 1334, 2109, 2180, 2378, 2477
MaeII	ACGT	2 cut(s)	1984, 2172
MaeIII	GTNAC	5 cut(s)	85, 1869, 1980, 2266, 2315
MbiI	CCGCTC	1 cut(s)	1400
MfeI	CAATTG	1 cut(s)	282
MflI	RGATCY	5 cut(s)	236, 1414, 1552, 1996, 2105
MhlI	GDGCHC	2 cut(s)	116, 2533
MlsI	TGGCCA	1 cut(s)	1781
MluNI	TGGCCA	1 cut(s)	1781
MlyI	GAGTC	1 cut(s)	2047
MmeI	TCCRAC	1 cut(s)	108
Mox20I	TGGCCA	1 cut(s)	1781
MroXI	GAANNNNTTC	6 cut(s)	1027, 1203, 1284, 1536, 1933, 1950
MscI	TGGCCA	1 cut(s)	1781
MslI	CAYNNNNRTG	1 cut(s)	632
Msp20I	TGGCCA	1 cut(s)	1781
MspA1I	CMGCKG	1 cut(s)	2483
MspCI	CTTAAG	1 cut(s)	1810
MspI	CCGG	5 cut(s)	83, 90, 106, 708, 1629
MspR9I	CCNGG	4 cut(s)	1422, 1630, 2195, 2554
MunI	CAATTG	1 cut(s)	282
Mva1269I	GAATGC	3 cut(s)	1811, 1935, 2190
MvaI	CCWGG	3 cut(s)	1422, 2195, 2554
MwoI	GCNNNNNNNGC	9 cut(s)	1220, 1724, 1733, 1874, 2303, 2339, 2445, 2486, 2495
NciI	CCSGG	1 cut(s)	1630
NcoI	CCATGG	3 cut(s)	1128, 1290, 2274
NdeI	CATATG	2 cut(s)	633, 1762
NheI	GCTAGC	1 cut(s)	2476
NmeAIII	GCCGAG	1 cut(s)	97
NmuCI	GTSAC	4 cut(s)	85, 1869, 1980, 2315
NspI	RCATGY	1 cut(s)	877
PaeR7I	CTCGAG	1 cut(s)	1713
PciSI	GCTCTTC	1 cut(s)	2538
PctI	GAATGC	3 cut(s)	1811, 1935, 2190
PdmI	GAANNNNTTC	6 cut(s)	1027, 1203, 1284, 1536, 1933, 1950
PfeI	GAWTC	4 cut(s)	100, 469, 1071, 1318
PflMI	CCANNNNNTGG	1 cut(s)	29
PinAI	ACCGGT	1 cut(s)	105
PkrI	GCNGC	8 cut(s)	145, 1759, 1960, 2305, 2335, 2482, 2485, 2488
PleI	GAGTC	1 cut(s)	2046
PmaCI	CACGTG	1 cut(s)	1985
PmlI	CACGTG	1 cut(s)	1985
PpsI	GAGTC	1 cut(s)	2046
Ppu21I	YACGTR	1 cut(s)	1985
PpuMI	RGGWCCY	1 cut(s)	172
PshBI	ATTAAT	2 cut(s)	402, 2414
Psp124BI	GAGCTC	1 cut(s)	2533
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	3 cut(s)	1420, 2193, 2552
PspCI	CACGTG	1 cut(s)	1985
PspEI	GGTNACC	1 cut(s)	85
PspGI	CCWGG	3 cut(s)	1420, 2193, 2552
PspPI	GGNCC	6 cut(s)	130, 172, 640, 705, 1264, 1325
PspPPI	RGGWCCY	1 cut(s)	172
PspXI	VCTCGAGB	1 cut(s)	1713
PsrI	GAACNNNNNNTAC	2 cut(s)	25, 57
PstNI	CAGNNNCTG	2 cut(s)	2168, 2486
PsuI	RGATCY	5 cut(s)	236, 1414, 1552, 1996, 2105
PvuII	CAGCTG	1 cut(s)	2483
RsaI	GTAC	3 cut(s)	781, 1471, 1521
RsaNI	GTAC	3 cut(s)	780, 1470, 1520
RseI	CAYNNNNRTG	1 cut(s)	632
SacI	GAGCTC	1 cut(s)	2533
SapI	GCTCTTC	1 cut(s)	2538
SatI	GCNGC	8 cut(s)	144, 1758, 1959, 2304, 2334, 2481, 2484, 2487
Sau96I	GGNCC	6 cut(s)	130, 172, 640, 705, 1264, 1325
SchI	GAGTC	1 cut(s)	2047
ScrFI	CCNGG	4 cut(s)	1422, 1630, 2195, 2554
SduI	GDGCHC	2 cut(s)	116, 2533
SfaNI	GCATC	7 cut(s)	466, 1474, 1642, 1675, 1693, 2350, 2557
SfcI	CTRYAG	2 cut(s)	867, 988
Sfr274I	CTCGAG	1 cut(s)	1713
SinI	GGWCC	5 cut(s)	130, 172, 705, 1264, 1325
SlaI	CTCGAG	1 cut(s)	1713
SmiI	ATTTAAAT	1 cut(s)	1059
SmiMI	CAYNNNNRTG	1 cut(s)	632
SmlI	CTYRAG	5 cut(s)	602, 980, 1713, 1810, 2455
SmoI	CTYRAG	5 cut(s)	602, 980, 1713, 1810, 2455
SsiI	CCGC	5 cut(s)	897, 1328, 1398, 2065, 2342
SspI	AATATT	2 cut(s)	700, 1039
SspMI	CTAG	7 cut(s)	264, 945, 1334, 2109, 2180, 2378, 2477
SstI	GAGCTC	1 cut(s)	2533
StyD4I	CCNGG	4 cut(s)	1420, 1628, 2193, 2552
StyI	CCWWGG	4 cut(s)	1128, 1290, 2060, 2274
SwaI	ATTTAAAT	1 cut(s)	1059
TaaI	ACNGT	5 cut(s)	443, 1598, 1621, 1740, 2639
TaiI	ACGT	2 cut(s)	1987, 2175
TaqI	TCGA	6 cut(s)	98, 340, 613, 1163, 1714, 2154
TaqII	GACCGA	1 cut(s)	1064
TfiI	GAWTC	4 cut(s)	100, 469, 1071, 1318
TscAI	CASTG	4 cut(s)	1410, 1603, 1624, 1665
TseFI	GTSAC	4 cut(s)	85, 1869, 1980, 2315
TseI	GCWGC	8 cut(s)	143, 1757, 1958, 2303, 2333, 2480, 2483, 2486
Tsp45I	GTSAC	4 cut(s)	85, 1869, 1980, 2315
TspGWI	ACGGA	2 cut(s)	1099, 2201
TspRI	CASTG	4 cut(s)	1410, 1603, 1624, 1665
Van91I	CCANNNNNTGG	1 cut(s)	29
Vha464I	CTTAAG	1 cut(s)	1810
VpaK11BI	GGWCC	5 cut(s)	130, 172, 705, 1264, 1325
VspI	ATTAAT	2 cut(s)	402, 2414
XapI	RAATTY	4 cut(s)	324, 592, 743, 2025
XbaI	TCTAGA	2 cut(s)	263, 2108
XceI	RCATGY	1 cut(s)	877
XhoI	CTCGAG	1 cut(s)	1713
XmnI	GAANNNNTTC	6 cut(s)	1027, 1203, 1284, 1536, 1933, 1950
XspI	CTAG	7 cut(s)	264, 945, 1334, 2109, 2180, 2378, 2477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.