Rmu_sc0006695.1_g000009

cationic amino acid transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006695.1
Physical Location & Seq
Reverse (-)
44233 .. 50544
6312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006695.1_g000009.1.cds

Sequence Viewer

Length: 1905 bp
atgcaaaacaagtgtttttgggggtttagaagcgtggttcggcggaagcaagttgattcagttcatgtgaaaagacagggagagggccatcatgaattggctaggaaattatgtgtcactgacctcattgccattggagttggagctacaataggtgctggagtgtatgtgcttgtgggaacggttgcaagagagcaggcagggcctgcgcttagcatttcattcttgattgctgggatagctgctgcactctctgccttctgctatgcagagcttgctggtcgctgtccctctgctggcagtgcttatcactattcctacatttgtctcggagaaggtgttgcttggtccgttggttgggctcttgctctagaatacactattggtgcttctgctgttgctcgtggcattaccccaaatctggccttgttttttggaggtctggataaattgcctgctgttttcgcccgtcacaccatccctgtgattggtgtcgtggttgatccatctgcagcagtattagttcttattgtcactttcctcttgtgtacaggaatcaaggagagttcattggtacaaatgattgttacatcggtaaatgtttctgtcttgctattcatcttgatagtcggtggttatttgggtttcaaaaatggatgggttggatatgaacttcccagcgggtattttccctttggaataaatgggatgtttactggctctgctgtggtcttcttttcgtacattggtttcgattcagttaccagcacagctgaggaggtgaagaatcctcaacgggatctgcccctcggtatagcaatatcattgcttatatgttgcatcttgtatatgcttctatctgttgttattaccggtttagtaccatactatgccttggatccagacactcccatctcctcagtatttgccggctatggcgtgcaatgggcagtgtatattataacaactggagcagttactgcgctctctgcaagtttgttgggttcgattcttgcccagccacggatcctgatggcaatggccagagatggattgttgccatcatttttttcggacattaataaaaacacccgtgttcctgtgaagagcactgttgcaactggtatctttgcagcagttttggcattctttatggatgtttcacaattggctgcaatggttagtgttggtaccctttttgcatttactaccgcagcagtttcagtcttgatacttagatatgttcctccagatgaggtgcccctttcatcatcacttcaagaggctattaagtcagtatcatcacgattaagttgcaatattcaagaaagtgacagcaaaaaccttcagaattctgctggctcatctgagaatgagagtcacaatctacatgaaattagggaggcattacttggctgtcctccgattgagaaaagcatatcacaagttgatctaaatgaacaaacaaggcgaaaaattgcttcctggaccataacctgtctctgtataggggtttttatccttgcattcgcagcttcagctaaaggtctttccagcactcttcgtttcacattgtgcgggctgtgtggaattttcctgctttgctgcttgattgtgctgtcctgtataggtcaagattttgcaaggcacagttttggacacaccggaggtttcacttgcccatttgttccattcttacctgctgcttgcattctcataaatacctacttacttattgatcttggagctgcgacatggatccgcacctctgtatggtttgccataggaggattgacatatttattttatggccggacgcatagttcactttcgaatgcaatttatgttcccttggcttatgctgatgaaatctatcgttccgactcgcaacatcatctgacctag

Protein Analysis

634

Amino Acids

67.72

Weight (kDa)

7.12

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 962
Acc36I ACCTGC 1 cut(s) 1708
Acc65I GGTACC 1 cut(s) 1190
AccB1I GGYRCC 2 cut(s) 1190, 1258
AciI CCGC 5 cut(s) 43, 681, 1212, 1578, 1762
AclWI GGATC 8 cut(s) 497, 807, 893, 906, 1021, 1034, 1753, 1766
AcoI YGGCCR 2 cut(s) 1041, 1810
AcsI RAATTY 2 cut(s) 1351, 1590
AcuI CTGAAG 2 cut(s) 1331, 1521
AdeI CACNNNGTG 1 cut(s) 1575
AfaI GTAC 5 cut(s) 550, 576, 743, 882, 1192
AfiI CCNNNNNNNGG 6 cut(s) 296, 357, 421, 488, 1023, 1773
AgeI ACCGGT 1 cut(s) 872
AgsI TTSAA 3 cut(s) 649, 1280, 1325
AjnI CCWGG 1 cut(s) 1484
AjuI GAANNNNNNNTTGG 2 cut(s) 366, 398
AloI GAACNNNNNNTCC 2 cut(s) 1807, 1839
AluBI AGCT 7 cut(s) 146, 242, 274, 773, 1535, 1541, 1748
AluI AGCT 7 cut(s) 146, 242, 274, 773, 1535, 1541, 1748
Alw21I GWGCWC 1 cut(s) 1112
Alw26I GTCTC 2 cut(s) 332, 1505
AlwI GGATC 8 cut(s) 497, 807, 893, 906, 1021, 1034, 1753, 1766
AlwNI CAGNNNCTG 2 cut(s) 206, 980
AoxI GGCC 5 cut(s) 85, 203, 423, 1041, 1810
ApoI RAATTY 2 cut(s) 1351, 1590
AseI ATTAAT 1 cut(s) 1080
AsiGI ACCGGT 1 cut(s) 872
Asp718I GGTACC 1 cut(s) 1190
AspLEI GCGC 2 cut(s) 211, 985
AspS9I GGNCC 4 cut(s) 85, 203, 348, 1488
AsuHPI GGTGA 1 cut(s) 793
AsuII TTCGAA 1 cut(s) 1832
AvaII GGWCC 2 cut(s) 348, 1488
BaeGI GKGCMC 1 cut(s) 1263
BalI TGGCCA 1 cut(s) 1043
BamHI GGATCC 3 cut(s) 898, 1026, 1758
BanI GGYRCC 2 cut(s) 1190, 1258
BanII GRGCYC 1 cut(s) 364
BauI CACGAG 1 cut(s) 402
BbsI GAAGAC 1 cut(s) 724
Bbv12I GWGCWC 1 cut(s) 1112
BbvCI CCTCAGC 1 cut(s) 774
BccI CCATC 8 cut(s) 96, 485, 514, 651, 920, 1027, 1043, 1069
BcgI CGANNNNNNTGC 2 cut(s) 1296, 1330
BciT130I CCWGG 1 cut(s) 1486
BcoDI GTCTC 2 cut(s) 332, 1505
BfaI CTAG 3 cut(s) 102, 371, 1903
BfmI CTRYAG 1 cut(s) 510
BfuAI ACCTGC 1 cut(s) 1708
BlpI GCTNAGC 1 cut(s) 212
Bme1390I CCNGG 1 cut(s) 1486
Bme18I GGWCC 2 cut(s) 348, 1488
BmgT120I GGNCC 4 cut(s) 85, 203, 348, 1488
BmiI GGNNCC 5 cut(s) 900, 1028, 1192, 1260, 1760
BmrFI CCNGG 1 cut(s) 1486
BmsI GCATC 1 cut(s) 849
BpiI GAAGAC 1 cut(s) 724
BpmI CTGGAG 3 cut(s) 180, 990, 1233
Bpu10I CCTNAGC 1 cut(s) 774
Bpu1102I GCTNAGC 1 cut(s) 212
Bpu14I TTCGAA 1 cut(s) 1832
BsaJI CCNNGG 4 cut(s) 808, 894, 1022, 1851
BsaWI WCCGGW 2 cut(s) 872, 1664
BsaXI ACNNNNNCTCC 4 cut(s) 153, 183, 324, 354
Bsc4I CCNNNNNNNGG 6 cut(s) 296, 357, 421, 488, 1023, 1773
Bse118I RCCGGY 2 cut(s) 872, 929
Bse1I ACTGG 3 cut(s) 721, 973, 1126
Bse3DI GCAATG 5 cut(s) 126, 824, 950, 1044, 1182
BseBI CCWGG 1 cut(s) 1486
BseDI CCNNGG 4 cut(s) 808, 894, 1022, 1851
BseGI GGATG 4 cut(s) 477, 662, 714, 1162
BseLI CCNNNNNNNGG 6 cut(s) 296, 357, 421, 488, 1023, 1773
BseMI GCAATG 5 cut(s) 126, 824, 950, 1044, 1182
BseMII CTCAG 3 cut(s) 765, 933, 1359
BseNI ACTGG 3 cut(s) 721, 973, 1126
BseRI GAGGAG 2 cut(s) 791, 907
BseSI GKGCMC 1 cut(s) 1263
BseYI CCCAGC 3 cut(s) 233, 677, 1017
BsgI GTGCAG 1 cut(s) 231
BshFI GGCC 5 cut(s) 87, 205, 425, 1043, 1812
BshNI GGYRCC 2 cut(s) 1190, 1258
BshTI ACCGGT 1 cut(s) 872
BsiHKAI GWGCWC 1 cut(s) 1112
BsiSI CCGG 4 cut(s) 873, 930, 1665, 1813
BslFI GGGAC 1 cut(s) 273
BslI CCNNNNNNNGG 6 cut(s) 296, 357, 421, 488, 1023, 1773
BsmAI GTCTC 2 cut(s) 332, 1505
BsmFI GGGAC 1 cut(s) 273
BsmI GAATGC 4 cut(s) 1145, 1526, 1710, 1840
BsnI GGCC 5 cut(s) 87, 205, 425, 1043, 1812
Bsp119I TTCGAA 1 cut(s) 1832
Bsp1286I GDGCHC 3 cut(s) 364, 1112, 1263
Bsp1407I TGTACA 1 cut(s) 548
Bsp143I GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
Bsp1720I GCTNAGC 1 cut(s) 212
BspACI CCGC 5 cut(s) 43, 681, 1212, 1578, 1762
BspANI GGCC 5 cut(s) 87, 205, 425, 1043, 1812
BspCNI CTCAG 3 cut(s) 766, 932, 1360
BspHI TCATGA 1 cut(s) 91
BspLI GGNNCC 5 cut(s) 900, 1028, 1192, 1260, 1760
BspMAI CTGCAG 1 cut(s) 514
BspMI ACCTGC 1 cut(s) 1708
BspPI GGATC 8 cut(s) 497, 807, 893, 906, 1021, 1034, 1753, 1766
BspQI GCTCTTC 1 cut(s) 1100
BspT104I TTCGAA 1 cut(s) 1832
BspT107I GGYRCC 2 cut(s) 1190, 1258
BsrDI GCAATG 5 cut(s) 126, 824, 950, 1044, 1182
BsrFI RCCGGY 2 cut(s) 872, 929
BsrGI TGTACA 1 cut(s) 548
BsrI ACTGG 3 cut(s) 721, 973, 1126
BssAI RCCGGY 2 cut(s) 872, 929
BssECI CCNNGG 4 cut(s) 808, 894, 1022, 1851
BssMI GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
BssSI CACGAG 1 cut(s) 402
BssT1I CCWWGG 2 cut(s) 894, 1851
Bst2BI CACGAG 1 cut(s) 402
Bst2UI CCWGG 1 cut(s) 1486
Bst4CI ACNGT 3 cut(s) 184, 1114, 1652
Bst6I CTCTTC 2 cut(s) 1100, 1566
BstAPI GCANNNNNTGC 4 cut(s) 206, 254, 275, 980
BstAUI TGTACA 1 cut(s) 548
BstBI TTCGAA 1 cut(s) 1832
BstDEI CTNAG 5 cut(s) 212, 774, 919, 1235, 1368
BstDSI CCRYGG 1 cut(s) 1022
BstF5I GGATG 4 cut(s) 477, 662, 714, 1162
BstHHI GCGC 2 cut(s) 211, 985
BstKTI GATC 7 cut(s) 505, 802, 901, 1029, 1453, 1741, 1761
BstMAI GTCTC 2 cut(s) 332, 1505
BstMBI GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
BstNI CCWGG 1 cut(s) 1486
BstSCI CCNGG 1 cut(s) 1484
BstSFI CTRYAG 1 cut(s) 510
BstSLI GKGCMC 1 cut(s) 1263
BstV2I GAAGAC 1 cut(s) 724
BstX2I RGATCY 4 cut(s) 799, 898, 1026, 1758
BstYI RGATCY 4 cut(s) 799, 898, 1026, 1758
BsuRI GGCC 5 cut(s) 87, 205, 425, 1043, 1812
BtgI CCRYGG 1 cut(s) 1022
BtsCI GGATG 4 cut(s) 477, 662, 714, 1162
BtsI GCAGTG 2 cut(s) 307, 957
BtsIMutI CAGTG 4 cut(s) 117, 307, 957, 1110
BveI ACCTGC 1 cut(s) 1708
CaiI CAGNNNCTG 2 cut(s) 206, 980
CciI TCATGA 1 cut(s) 91
CfoI GCGC 2 cut(s) 211, 985
Cfr10I RCCGGY 2 cut(s) 872, 929
Cfr13I GGNCC 4 cut(s) 85, 203, 348, 1488
CseI GACGC 1 cut(s) 1825
Csp6I GTAC 5 cut(s) 549, 575, 742, 881, 1191
CspAI ACCGGT 1 cut(s) 872
CviAII CATG 4 cut(s) 65, 92, 1391, 1755
CviQI GTAC 5 cut(s) 549, 575, 742, 881, 1191
DdeI CTNAG 5 cut(s) 212, 774, 919, 1235, 1368
DpnI GATC 7 cut(s) 504, 801, 900, 1028, 1452, 1740, 1760
DpnII GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
DraIII CACNNNGTG 1 cut(s) 1575
EaeI YGGCCR 2 cut(s) 1041, 1810
Eam1104I CTCTTC 2 cut(s) 1100, 1566
EarI CTCTTC 2 cut(s) 1100, 1566
EciI GGCGGA 1 cut(s) 58
Eco130I CCWWGG 2 cut(s) 894, 1851
Eco24I GRGCYC 1 cut(s) 364
Eco47I GGWCC 2 cut(s) 348, 1488
Eco57I CTGAAG 2 cut(s) 1331, 1521
EcoO109I RGGNCCY 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 1351
EcoRII CCWGG 1 cut(s) 1484
EcoT14I CCWWGG 2 cut(s) 894, 1851
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 2 cut(s) 894, 1851
FaeI CATG 4 cut(s) 68, 95, 1394, 1758
FaqI GGGAC 1 cut(s) 273
FatI CATG 4 cut(s) 64, 91, 1390, 1754
FauI CCCGC 2 cut(s) 674, 1571
FokI GGATG 4 cut(s) 464, 669, 721, 1169
FriOI GRGCYC 1 cut(s) 364
FspBI CTAG 3 cut(s) 102, 371, 1903
GlaI GCGC 2 cut(s) 210, 984
GsaI CCCAGC 3 cut(s) 237, 681, 1021
GsuI CTGGAG 3 cut(s) 180, 990, 1233
HaeIII GGCC 5 cut(s) 87, 205, 425, 1043, 1812
HapII CCGG 4 cut(s) 873, 930, 1665, 1813
HgaI GACGC 1 cut(s) 1825
HhaI GCGC 2 cut(s) 211, 985
Hin1II CATG 4 cut(s) 68, 95, 1394, 1758
Hin6I GCGC 2 cut(s) 209, 983
HinP1I GCGC 2 cut(s) 209, 983
HinfI GANTC 7 cut(s) 56, 555, 755, 787, 1009, 1378, 1883
HpaII CCGG 4 cut(s) 873, 930, 1665, 1813
HphI GGTGA 1 cut(s) 793
Hpy166II GTNNAC 3 cut(s) 549, 714, 1826
Hpy188I TCNGA 7 cut(s) 332, 1075, 1350, 1369, 1425, 1882, 1899
Hpy8I GTNNAC 3 cut(s) 549, 714, 1826
HpyAV CCTTC 3 cut(s) 268, 329, 1355
HpyCH4III ACNGT 3 cut(s) 184, 1114, 1652
HpyF3I CTNAG 5 cut(s) 212, 774, 919, 1235, 1368
Hsp92II CATG 4 cut(s) 68, 95, 1394, 1758
HspAI GCGC 2 cut(s) 209, 983
KpnI GGTACC 1 cut(s) 1194
KroI GCCGGC 1 cut(s) 929
KroNI GCCGGC 1 cut(s) 931
Kzo9I GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
LguI GCTCTTC 1 cut(s) 1100
LmnI GCTCC 3 cut(s) 143, 971, 1745
LweI GCATC 1 cut(s) 849
MaeI CTAG 3 cut(s) 102, 371, 1903
MaeIII GTNAC 8 cut(s) 115, 470, 532, 586, 760, 976, 1331, 1379
MalI GATC 7 cut(s) 504, 801, 900, 1028, 1452, 1740, 1760
MboI GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
MboII GAAGA 4 cut(s) 724, 796, 1117, 1553
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 4 cut(s) 799, 898, 1026, 1758
MhlI GDGCHC 3 cut(s) 364, 1112, 1263
MlsI TGGCCA 1 cut(s) 1043
MluCI AATT 9 cut(s) 95, 107, 449, 1166, 1351, 1395, 1476, 1590, 1839
MluNI TGGCCA 1 cut(s) 1043
MlyI GAGTC 2 cut(s) 1387, 1877
MmeI TCCRAC 3 cut(s) 121, 643, 1905
Mox20I TGGCCA 1 cut(s) 1043
MroNI GCCGGC 1 cut(s) 929
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 3 cut(s) 1080, 1290, 1310
MslI CAYNNNNRTG 1 cut(s) 482
Msp20I TGGCCA 1 cut(s) 1043
MspA1I CMGCKG 2 cut(s) 681, 773
MspI CCGG 4 cut(s) 873, 930, 1665, 1813
MspR9I CCNGG 1 cut(s) 1486
MunI CAATTG 1 cut(s) 1166
Mva1269I GAATGC 4 cut(s) 1145, 1526, 1710, 1840
MvaI CCWGG 1 cut(s) 1486
NaeI GCCGGC 1 cut(s) 931
NdeII GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
NgoMIV GCCGGC 1 cut(s) 929
NlaIII CATG 4 cut(s) 68, 95, 1394, 1758
NlaIV GGNNCC 5 cut(s) 900, 1028, 1192, 1260, 1760
NmuCI GTSAC 5 cut(s) 115, 470, 532, 1331, 1379
NspV TTCGAA 1 cut(s) 1832
PagI TCATGA 1 cut(s) 91
PciSI GCTCTTC 1 cut(s) 1100
PctI GAATGC 4 cut(s) 1145, 1526, 1710, 1840
PdiI GCCGGC 1 cut(s) 931
PfeI GAWTC 5 cut(s) 56, 555, 755, 787, 1009
PfoI TCCNGGA 1 cut(s) 1484
PinAI ACCGGT 1 cut(s) 872
PleI GAGTC 2 cut(s) 1386, 1877
PpsI GAGTC 2 cut(s) 1386, 1877
PshBI ATTAAT 1 cut(s) 1080
PsiI TTATAA 1 cut(s) 962
Psp6I CCWGG 1 cut(s) 1484
PspFI CCCAGC 3 cut(s) 233, 677, 1017
PspGI CCWGG 1 cut(s) 1484
PspN4I GGNNCC 5 cut(s) 900, 1028, 1192, 1260, 1760
PspPI GGNCC 4 cut(s) 85, 203, 348, 1488
PstI CTGCAG 1 cut(s) 514
PstNI CAGNNNCTG 2 cut(s) 206, 980
PsuI RGATCY 4 cut(s) 799, 898, 1026, 1758
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 5 cut(s) 550, 576, 743, 882, 1192
RsaNI GTAC 5 cut(s) 549, 575, 742, 881, 1191
RseI CAYNNNNRTG 1 cut(s) 482
SapI GCTCTTC 1 cut(s) 1100
SaqAI TTAA 3 cut(s) 1080, 1290, 1310
Sau3AI GATC 7 cut(s) 502, 799, 898, 1026, 1450, 1738, 1758
Sau96I GGNCC 4 cut(s) 85, 203, 348, 1488
SchI GAGTC 2 cut(s) 1387, 1877
ScrFI CCNGG 1 cut(s) 1486
SduI GDGCHC 3 cut(s) 364, 1112, 1263
SfaNI GCATC 1 cut(s) 849
SfcI CTRYAG 1 cut(s) 510
SfuI TTCGAA 1 cut(s) 1832
SinI GGWCC 2 cut(s) 348, 1488
SmiMI CAYNNNNRTG 1 cut(s) 482
Sse9I AATT 9 cut(s) 95, 107, 449, 1166, 1351, 1395, 1476, 1590, 1839
SsiI CCGC 5 cut(s) 43, 681, 1212, 1578, 1762
SspI AATATT 1 cut(s) 1321
SspMI CTAG 3 cut(s) 102, 371, 1903
StyD4I CCNGG 1 cut(s) 1484
StyI CCWWGG 2 cut(s) 894, 1851
TaaI ACNGT 3 cut(s) 184, 1114, 1652
TaqI TCGA 3 cut(s) 753, 1007, 1832
TasI AATT 9 cut(s) 95, 107, 449, 1166, 1351, 1395, 1476, 1590, 1839
TatI WGTACW 1 cut(s) 548
TfiI GAWTC 5 cut(s) 56, 555, 755, 787, 1009
Tru1I TTAA 3 cut(s) 1080, 1290, 1310
Tru9I TTAA 3 cut(s) 1080, 1290, 1310
TscAI CASTG 4 cut(s) 124, 307, 957, 1117
TseFI GTSAC 5 cut(s) 115, 470, 532, 1331, 1379
Tsp45I GTSAC 5 cut(s) 115, 470, 532, 1331, 1379
TspGWI ACGGA 2 cut(s) 340, 1039
TspRI CASTG 4 cut(s) 124, 307, 957, 1117
VpaK11BI GGWCC 2 cut(s) 348, 1488
VspI ATTAAT 1 cut(s) 1080
XapI RAATTY 2 cut(s) 1351, 1590
XbaI TCTAGA 1 cut(s) 370
XspI CTAG 3 cut(s) 102, 371, 1903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.