Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0005251

Physical Location & Seq

Genomic Coordinates Reverse (-)

3056899 .. 3063230

Gene Structure 6332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00389490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGCACGTTACCCGAAGCGTCATCACAGTAAAACTGGGTTGTTACTTATCTACCCCTATCAAGGAACATGACGTCTGTTATCTCCTGGTTCGGCGGAAGCAAGTTGACTCAGTTCATGTGAAAAGACAGGGAGAGGGCCATCATGAATTGGCTAGGAAATTATGTGTCACTGACCTCATTGCCATTGGAGTTGGAGCTACAATAGGTGCTGGAGTGTATGTGCTTGTGGGAACAGTTGCAAGAGAGCAGGCAGGGCCTGCGCTTACCATTTCATTCTTGATTGCTGGGATAGCTGCTGCACTCTCTGCCTTTTGCTATGCAGAGCTTGCTTGTCGCTGTCCTTCTGCTGGCAGTGCTTATCACTATTCCTACATTTGTCTCGGAGAAGGTGTTGCTTGGTCCGTTGGTTGGGCTCTTGCTCTAGAATACACTATTGGTGCTTCTGCTGTTGCTCGCCTTGTTTTTGGAGGTCTGGATAAATTGCCTGCTGTTTTCGCCCGTCACACCATCCCTGTGATTGGTGTCGTGGTTGATCCATCTGCAGCAGTATTAGTTCTTATTGTCACTTTCCTCTTGTGTACAGGAATCAAGGAGAGTTCATTGGTACAAATGATTGTTACATCAGTAAATGTTTCTGTCTTGCTATTCATCTTGATAGTTGGTGGATATTTGGGTTTCAAAAATGGATGGGTTGGATATGAACTTCCCAGCGGGTATTTTCCCTTTGGAATAAATGGGATGTTTACTGGCTCTGCTGTGGTCTTCTTTTCATACATTGGTTTCGATTCAGTTACCAGCACAGCTGAGGAGGTGAAGAATCCTCAACGGGATCTGCCCCTCGGTATAGCAATATCATTGCTTATATGTTGCATCTTGTATATGCTTCTATCTGTTGTTATTACCGGTTTAGTACCATACTATGCCTTGGATCCAGACACTCCCATCTCCACAGTATTTGCCGGCTATGGCGTGCAATGGGCTGTGTATATTATAACAACTGGAGCAGTTACCGCTCTCTCTGCAAGTTTGTTGGGTTCGATTCTTGCCCAGCCACGGATCCTGATGGCAATGGCCAGAGATGGATTGTTGCCATCATTTTTTTCAGACATTAATAAAAACACCCATGTTCCTGTGAAGAGCACTGTTACAACTGGTATCTTTGCAGCAGTTTTGGCATTCTTTATGGATGTTTCACAATTGGCTGCAATGGTTAGTGTTGGTACCCTTTTTGCATTTACTACCGCAGCAGTTTCAGTCTTGATACTTAGATATGTTCCTCCAGATGAGGTGCCCCTTTCATCATCACTTCAAGAGGCTATTAAGTCAGTATCATCACGATTAAGTTGCAATATTCAAGAAAGTGACAGCAAAAACCTTCAGAATTCTGCCAGCTCATCTGAGAATGAGAGTCACAATCTACATGAAATTGGGGAGGCATTACTCGGCTGCCCTCCGACTGAGAAAAGCATATCACAAGGTCAAGATTTTGCAAGGCACAGTTTTGGACACACCGGAGGTTTCACTTGCCCATTTGTTCCATTCTTACCTGCTGCTTGCATTCTCATAAATACCTACTTACTTATTGATCTTGGAGCTGCGACATGGATCCGCTCCTCTGTATGGTTTGCCATAGGAGGATTGACATATTTATTTTATGGCCGGACGCATAGTTCACTTTCGAATGCAATTTATGTTCCCTTGGCTTATGCTGATGAAATCTATCGTTCCGACTTGCAACATCATCTGACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009705 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

583

Amino Acids

62.27

Weight (kDa)

6.2

Isoelectric Point (pI)

37.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	58 - 429	6.2e-51	Amino acid permease
AA_permease	PF00324	59 - 422	6.5e-40	Amino acid permease
AA_permease_C	PF13906	507 - 557	5.6e-22	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03720
malus_domestica	MD12G1010300.v1.1 MD12G1010400.v1.1 MD14G1007500.v1.1
prunus_persica	Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1 Prupe.7G012400_v2.0.a1
pyrus_communis	pycom12g00800
rosa_chinensis	RchiOBHm_Chr3g0496181
rosa_laevigata	RLG00000022554
rosa_multiflora	Rmu_sc0003733.1_g000063 Rmu_sc0006695.1_g000009
rosa_roxburghii	Rroxscaffold_6G00389490
rosa_rugosa	Rorug03G0280100.1 Rorug03G0280200 Rorug03G0280300 Rorug03G0280300
rosa_samantha	Rh3AG327100 Rh3BG363300 Rh3CG360000 Rh3DG363200
rosa_wichuraiana	Rw3G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	992
AatII	GACGTC	1 cut(s)	75
Acc36I	ACCTGC	1 cut(s)	1555
Acc65I	GGTACC	1 cut(s)	1220
AccB1I	GGYRCC	2 cut(s)	1220, 1288
AccBSI	CCGCTC	2 cut(s)	1013, 1611
AciI	CCGC	5 cut(s)	94, 711, 1011, 1242, 1609
AclWI	GGATC	8 cut(s)	527, 837, 923, 936, 1051, 1064, 1600, 1613
AcoI	YGGCCR	2 cut(s)	1071, 1657
AcsI	RAATTY	1 cut(s)	1381
AcuI	CTGAAG	1 cut(s)	1361
AcyI	GRCGYC	1 cut(s)	72
AfaI	GTAC	4 cut(s)	580, 606, 912, 1222
AfiI	CCNNNNNNNGG	6 cut(s)	61, 347, 408, 518, 1053, 1620
AgeI	ACCGGT	1 cut(s)	902
AgsI	TTSAA	3 cut(s)	679, 1310, 1355
AjnI	CCWGG	1 cut(s)	84
AjuI	GAANNNNNNNTTGG	2 cut(s)	417, 449
AloI	GAACNNNNNNTCC	2 cut(s)	1654, 1686
AluBI	AGCT	6 cut(s)	197, 293, 325, 803, 1392, 1595
AluI	AGCT	6 cut(s)	197, 293, 325, 803, 1392, 1595
Alw21I	GWGCWC	1 cut(s)	1142
Alw26I	GTCTC	1 cut(s)	383
AlwI	GGATC	8 cut(s)	527, 837, 923, 936, 1051, 1064, 1600, 1613
AlwNI	CAGNNNCTG	1 cut(s)	257
AoxI	GGCC	4 cut(s)	136, 254, 1071, 1657
ApeKI	GCWGC	9 cut(s)	293, 296, 542, 1163, 1202, 1244, 1446, 1550, 1595
ApoI	RAATTY	1 cut(s)	1381
AseI	ATTAAT	1 cut(s)	1110
AsiGI	ACCGGT	1 cut(s)	902
Asp718I	GGTACC	1 cut(s)	1220
AspLEI	GCGC	1 cut(s)	262
AspS9I	GGNCC	3 cut(s)	136, 254, 399
AsuHPI	GGTGA	1 cut(s)	823
AsuII	TTCGAA	1 cut(s)	1679
AvaII	GGWCC	1 cut(s)	399
BaeGI	GKGCMC	1 cut(s)	1293
BalI	TGGCCA	1 cut(s)	1073
BamHI	GGATCC	3 cut(s)	928, 1056, 1605
BanI	GGYRCC	2 cut(s)	1220, 1288
BanII	GRGCYC	1 cut(s)	415
BbsI	GAAGAC	1 cut(s)	754
Bbv12I	GWGCWC	1 cut(s)	1142
BbvCI	CCTCAGC	1 cut(s)	804
BbvI	GCAGC	9 cut(s)	280, 283, 554, 1175, 1189, 1256, 1433, 1537, 1582
BccI	CCATC	8 cut(s)	147, 515, 544, 681, 950, 1057, 1073, 1099
BcgI	CGANNNNNNTGC	2 cut(s)	1326, 1360
BciT130I	CCWGG	1 cut(s)	86
BcoDI	GTCTC	1 cut(s)	383
BfaI	CTAG	3 cut(s)	153, 422, 1750
BfmI	CTRYAG	1 cut(s)	540
BfuAI	ACCTGC	1 cut(s)	1555
BisI	GCNGC	9 cut(s)	294, 297, 543, 1164, 1203, 1245, 1447, 1551, 1596
BlsI	GCNGC	9 cut(s)	295, 298, 544, 1165, 1204, 1246, 1448, 1552, 1597
Bme1390I	CCNGG	1 cut(s)	86
Bme18I	GGWCC	1 cut(s)	399
BmgT120I	GGNCC	3 cut(s)	136, 254, 399
BmiI	GGNNCC	5 cut(s)	930, 1058, 1222, 1290, 1607
BmrFI	CCNGG	1 cut(s)	86
BmrI	ACTGGG	1 cut(s)	44
BmsI	GCATC	1 cut(s)	879
BmuI	ACTGGG	1 cut(s)	44
BpiI	GAAGAC	1 cut(s)	754
BpmI	CTGGAG	3 cut(s)	231, 1020, 1263
Bpu10I	CCTNAGC	1 cut(s)	804
Bpu14I	TTCGAA	1 cut(s)	1679
BsaHI	GRCGYC	1 cut(s)	72
BsaJI	CCNNGG	4 cut(s)	838, 924, 1052, 1698
BsaWI	WCCGGW	2 cut(s)	902, 1511
BsaXI	ACNNNNNCTCC	4 cut(s)	204, 234, 375, 405
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 347, 408, 518, 1053, 1620
Bse118I	RCCGGY	2 cut(s)	902, 959
Bse1I	ACTGG	4 cut(s)	39, 751, 1003, 1156
Bse3DI	GCAATG	5 cut(s)	177, 854, 980, 1074, 1212
BseBI	CCWGG	1 cut(s)	86
BseDI	CCNNGG	4 cut(s)	838, 924, 1052, 1698
BseGI	GGATG	4 cut(s)	507, 692, 744, 1192
BseLI	CCNNNNNNNGG	6 cut(s)	61, 347, 408, 518, 1053, 1620
BseMI	GCAATG	5 cut(s)	177, 854, 980, 1074, 1212
BseMII	CTCAG	4 cut(s)	123, 795, 1389, 1449
BseNI	ACTGG	4 cut(s)	39, 751, 1003, 1156
BseRI	GAGGAG	2 cut(s)	821, 1603
BseSI	GKGCMC	1 cut(s)	1293
BseXI	GCAGC	9 cut(s)	280, 283, 554, 1175, 1189, 1256, 1433, 1537, 1582
BseYI	CCCAGC	3 cut(s)	284, 707, 1047
BsgI	GTGCAG	1 cut(s)	282
BshFI	GGCC	4 cut(s)	138, 256, 1073, 1659
BshNI	GGYRCC	2 cut(s)	1220, 1288
BshTI	ACCGGT	1 cut(s)	902
BsiHKAI	GWGCWC	1 cut(s)	1142
BsiSI	CCGG	4 cut(s)	903, 960, 1512, 1660
BslI	CCNNNNNNNGG	6 cut(s)	61, 347, 408, 518, 1053, 1620
BsmAI	GTCTC	1 cut(s)	383
BsmI	GAATGC	3 cut(s)	1175, 1557, 1687
BsnI	GGCC	4 cut(s)	138, 256, 1073, 1659
Bsp119I	TTCGAA	1 cut(s)	1679
Bsp1286I	GDGCHC	3 cut(s)	415, 1142, 1293
Bsp1407I	TGTACA	1 cut(s)	578
Bsp143I	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
BspACI	CCGC	5 cut(s)	94, 711, 1011, 1242, 1609
BspANI	GGCC	4 cut(s)	138, 256, 1073, 1659
BspCNI	CTCAG	4 cut(s)	122, 796, 1390, 1450
BspHI	TCATGA	1 cut(s)	142
BspLI	GGNNCC	5 cut(s)	930, 1058, 1222, 1290, 1607
BspMAI	CTGCAG	1 cut(s)	544
BspMI	ACCTGC	1 cut(s)	1555
BspPI	GGATC	8 cut(s)	527, 837, 923, 936, 1051, 1064, 1600, 1613
BspQI	GCTCTTC	1 cut(s)	1130
BspT104I	TTCGAA	1 cut(s)	1679
BspT107I	GGYRCC	2 cut(s)	1220, 1288
BsrBI	CCGCTC	2 cut(s)	1013, 1611
BsrDI	GCAATG	5 cut(s)	177, 854, 980, 1074, 1212
BsrFI	RCCGGY	2 cut(s)	902, 959
BsrGI	TGTACA	1 cut(s)	578
BsrI	ACTGG	4 cut(s)	39, 751, 1003, 1156
BssAI	RCCGGY	2 cut(s)	902, 959
BssECI	CCNNGG	4 cut(s)	838, 924, 1052, 1698
BssMI	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
BssNI	GRCGYC	1 cut(s)	72
BssT1I	CCWWGG	2 cut(s)	924, 1698
Bst2UI	CCWGG	1 cut(s)	86
Bst4CI	ACNGT	5 cut(s)	28, 235, 952, 1144, 1499
Bst6I	CTCTTC	1 cut(s)	1130
BstACI	GRCGYC	1 cut(s)	72
BstAPI	GCANNNNNTGC	3 cut(s)	257, 305, 326
BstAUI	TGTACA	1 cut(s)	578
BstBI	TTCGAA	1 cut(s)	1679
BstDEI	CTNAG	5 cut(s)	109, 804, 1265, 1398, 1458
BstDSI	CCRYGG	1 cut(s)	1052
BstF5I	GGATG	4 cut(s)	507, 692, 744, 1192
BstHHI	GCGC	1 cut(s)	262
BstKTI	GATC	6 cut(s)	535, 832, 931, 1059, 1588, 1608
BstMAI	GTCTC	1 cut(s)	383
BstMBI	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
BstNI	CCWGG	1 cut(s)	86
BstSCI	CCNGG	1 cut(s)	84
BstSFI	CTRYAG	1 cut(s)	540
BstSLI	GKGCMC	1 cut(s)	1293
BstV1I	GCAGC	9 cut(s)	280, 283, 554, 1175, 1189, 1256, 1433, 1537, 1582
BstV2I	GAAGAC	1 cut(s)	754
BstX2I	RGATCY	4 cut(s)	829, 928, 1056, 1605
BstYI	RGATCY	4 cut(s)	829, 928, 1056, 1605
BsuRI	GGCC	4 cut(s)	138, 256, 1073, 1659
BtgI	CCRYGG	1 cut(s)	1052
BtsCI	GGATG	4 cut(s)	507, 692, 744, 1192
BtsI	GCAGTG	1 cut(s)	358
BtsIMutI	CAGTG	3 cut(s)	168, 358, 1140
BveI	ACCTGC	1 cut(s)	1555
CaiI	CAGNNNCTG	1 cut(s)	257
CciI	TCATGA	1 cut(s)	142
CfoI	GCGC	1 cut(s)	262
Cfr10I	RCCGGY	2 cut(s)	902, 959
Cfr13I	GGNCC	3 cut(s)	136, 254, 399
CseI	GACGC	2 cut(s)	7, 1672
Csp6I	GTAC	4 cut(s)	579, 605, 911, 1221
CspAI	ACCGGT	1 cut(s)	902
CspCI	CAANNNNNGTGG	2 cut(s)	937, 972
CviAII	CATG	6 cut(s)	68, 116, 143, 1124, 1421, 1602
CviQI	GTAC	4 cut(s)	579, 605, 911, 1221
DdeI	CTNAG	5 cut(s)	109, 804, 1265, 1398, 1458
DpnI	GATC	6 cut(s)	534, 831, 930, 1058, 1587, 1607
DpnII	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
EaeI	YGGCCR	2 cut(s)	1071, 1657
Eam1104I	CTCTTC	1 cut(s)	1130
EarI	CTCTTC	1 cut(s)	1130
EciI	GGCGGA	1 cut(s)	109
Eco130I	CCWWGG	2 cut(s)	924, 1698
Eco24I	GRGCYC	1 cut(s)	415
Eco47I	GGWCC	1 cut(s)	399
Eco57I	CTGAAG	1 cut(s)	1361
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	1 cut(s)	1381
EcoRII	CCWGG	1 cut(s)	84
EcoT14I	CCWWGG	2 cut(s)	924, 1698
EcoT38I	GRGCYC	1 cut(s)	415
ErhI	CCWWGG	2 cut(s)	924, 1698
FaeI	CATG	6 cut(s)	71, 119, 146, 1127, 1424, 1605
FatI	CATG	6 cut(s)	67, 115, 142, 1123, 1420, 1601
FauI	CCCGC	1 cut(s)	704
Fnu4HI	GCNGC	9 cut(s)	294, 297, 543, 1164, 1203, 1245, 1447, 1551, 1596
FokI	GGATG	4 cut(s)	494, 699, 751, 1199
FriOI	GRGCYC	1 cut(s)	415
Fsp4HI	GCNGC	9 cut(s)	294, 297, 543, 1164, 1203, 1245, 1447, 1551, 1596
FspBI	CTAG	3 cut(s)	153, 422, 1750
GlaI	GCGC	1 cut(s)	261
GluI	GCNGC	9 cut(s)	294, 297, 543, 1164, 1203, 1245, 1447, 1551, 1596
GsaI	CCCAGC	3 cut(s)	288, 711, 1051
GsuI	CTGGAG	3 cut(s)	231, 1020, 1263
HaeIII	GGCC	4 cut(s)	138, 256, 1073, 1659
HapII	CCGG	4 cut(s)	903, 960, 1512, 1660
HgaI	GACGC	2 cut(s)	7, 1672
HhaI	GCGC	1 cut(s)	262
Hin1I	GRCGYC	1 cut(s)	72
Hin1II	CATG	6 cut(s)	71, 119, 146, 1127, 1424, 1605
Hin6I	GCGC	1 cut(s)	260
HinP1I	GCGC	1 cut(s)	260
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HinfI	GANTC	6 cut(s)	107, 585, 785, 817, 1039, 1408
HpaII	CCGG	4 cut(s)	903, 960, 1512, 1660
HphI	GGTGA	1 cut(s)	823
Hpy166II	GTNNAC	4 cut(s)	106, 579, 744, 1673
Hpy188I	TCNGA	7 cut(s)	383, 1105, 1380, 1399, 1455, 1729, 1746
Hpy8I	GTNNAC	4 cut(s)	106, 579, 744, 1673
HpyAV	CCTTC	3 cut(s)	351, 380, 1385
HpyCH4III	ACNGT	5 cut(s)	28, 235, 952, 1144, 1499
HpyCH4IV	ACGT	2 cut(s)	6, 72
HpyF3I	CTNAG	5 cut(s)	109, 804, 1265, 1398, 1458
HpySE526I	ACGT	2 cut(s)	6, 72
Hsp92I	GRCGYC	1 cut(s)	72
Hsp92II	CATG	6 cut(s)	71, 119, 146, 1127, 1424, 1605
HspAI	GCGC	1 cut(s)	260
KpnI	GGTACC	1 cut(s)	1224
KroI	GCCGGC	1 cut(s)	959
KroNI	GCCGGC	1 cut(s)	961
Kzo9I	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
LguI	GCTCTTC	1 cut(s)	1130
LmnI	GCTCC	4 cut(s)	194, 1001, 1592, 1616
Lsp1109I	GCAGC	9 cut(s)	280, 283, 554, 1175, 1189, 1256, 1433, 1537, 1582
LweI	GCATC	1 cut(s)	879
MaeI	CTAG	3 cut(s)	153, 422, 1750
MaeII	ACGT	2 cut(s)	6, 72
MalI	GATC	6 cut(s)	534, 831, 930, 1058, 1587, 1607
MbiI	CCGCTC	2 cut(s)	1013, 1611
MboI	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
MboII	GAAGA	3 cut(s)	754, 826, 1147
MfeI	CAATTG	1 cut(s)	1196
MflI	RGATCY	4 cut(s)	829, 928, 1056, 1605
MhlI	GDGCHC	3 cut(s)	415, 1142, 1293
MlsI	TGGCCA	1 cut(s)	1073
MluCI	AATT	7 cut(s)	146, 158, 479, 1196, 1381, 1425, 1686
MluNI	TGGCCA	1 cut(s)	1073
MlyI	GAGTC	2 cut(s)	101, 1417
MmeI	TCCRAC	4 cut(s)	172, 673, 1478, 1752
Mox20I	TGGCCA	1 cut(s)	1073
MroNI	GCCGGC	1 cut(s)	959
MscI	TGGCCA	1 cut(s)	1073
MseI	TTAA	3 cut(s)	1110, 1320, 1340
MslI	CAYNNNNRTG	1 cut(s)	512
Msp20I	TGGCCA	1 cut(s)	1073
MspA1I	CMGCKG	2 cut(s)	711, 803
MspI	CCGG	4 cut(s)	903, 960, 1512, 1660
MspR9I	CCNGG	1 cut(s)	86
MunI	CAATTG	1 cut(s)	1196
Mva1269I	GAATGC	3 cut(s)	1175, 1557, 1687
MvaI	CCWGG	1 cut(s)	86
NaeI	GCCGGC	1 cut(s)	961
NdeII	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
NgoMIV	GCCGGC	1 cut(s)	959
NlaIII	CATG	6 cut(s)	71, 119, 146, 1127, 1424, 1605
NlaIV	GGNNCC	5 cut(s)	930, 1058, 1222, 1290, 1607
NmeAIII	GCCGAG	1 cut(s)	1422
NmuCI	GTSAC	5 cut(s)	166, 500, 562, 1361, 1409
NspV	TTCGAA	1 cut(s)	1679
PagI	TCATGA	1 cut(s)	142
PciSI	GCTCTTC	1 cut(s)	1130
PctI	GAATGC	3 cut(s)	1175, 1557, 1687
PdiI	GCCGGC	1 cut(s)	961
PfeI	GAWTC	4 cut(s)	585, 785, 817, 1039
PinAI	ACCGGT	1 cut(s)	902
PkrI	GCNGC	9 cut(s)	295, 298, 544, 1165, 1204, 1246, 1448, 1552, 1597
PleI	GAGTC	2 cut(s)	101, 1416
PpsI	GAGTC	2 cut(s)	101, 1416
PshBI	ATTAAT	1 cut(s)	1110
PsiI	TTATAA	1 cut(s)	992
Psp6I	CCWGG	1 cut(s)	84
PspFI	CCCAGC	3 cut(s)	284, 707, 1047
PspGI	CCWGG	1 cut(s)	84
PspN4I	GGNNCC	5 cut(s)	930, 1058, 1222, 1290, 1607
PspPI	GGNCC	3 cut(s)	136, 254, 399
PstI	CTGCAG	1 cut(s)	544
PstNI	CAGNNNCTG	1 cut(s)	257
PsuI	RGATCY	4 cut(s)	829, 928, 1056, 1605
PvuII	CAGCTG	1 cut(s)	803
RsaI	GTAC	4 cut(s)	580, 606, 912, 1222
RsaNI	GTAC	4 cut(s)	579, 605, 911, 1221
RseI	CAYNNNNRTG	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	1130
SaqAI	TTAA	3 cut(s)	1110, 1320, 1340
SatI	GCNGC	9 cut(s)	294, 297, 543, 1164, 1203, 1245, 1447, 1551, 1596
Sau3AI	GATC	6 cut(s)	532, 829, 928, 1056, 1585, 1605
Sau96I	GGNCC	3 cut(s)	136, 254, 399
SchI	GAGTC	2 cut(s)	101, 1417
ScrFI	CCNGG	1 cut(s)	86
SduI	GDGCHC	3 cut(s)	415, 1142, 1293
SfaNI	GCATC	1 cut(s)	879
SfcI	CTRYAG	1 cut(s)	540
SfuI	TTCGAA	1 cut(s)	1679
SinI	GGWCC	1 cut(s)	399
SmiMI	CAYNNNNRTG	1 cut(s)	512
Sse9I	AATT	7 cut(s)	146, 158, 479, 1196, 1381, 1425, 1686
SsiI	CCGC	5 cut(s)	94, 711, 1011, 1242, 1609
SspI	AATATT	1 cut(s)	1351
SspMI	CTAG	3 cut(s)	153, 422, 1750
StyD4I	CCNGG	1 cut(s)	84
StyI	CCWWGG	2 cut(s)	924, 1698
TaaI	ACNGT	5 cut(s)	28, 235, 952, 1144, 1499
TaiI	ACGT	2 cut(s)	9, 75
TaqI	TCGA	3 cut(s)	783, 1037, 1679
TasI	AATT	7 cut(s)	146, 158, 479, 1196, 1381, 1425, 1686
TatI	WGTACW	1 cut(s)	578
TfiI	GAWTC	4 cut(s)	585, 785, 817, 1039
Tru1I	TTAA	3 cut(s)	1110, 1320, 1340
Tru9I	TTAA	3 cut(s)	1110, 1320, 1340
TscAI	CASTG	3 cut(s)	175, 358, 1147
TseFI	GTSAC	5 cut(s)	166, 500, 562, 1361, 1409
TseI	GCWGC	9 cut(s)	293, 296, 542, 1163, 1202, 1244, 1446, 1550, 1595
Tsp45I	GTSAC	5 cut(s)	166, 500, 562, 1361, 1409
TspGWI	ACGGA	2 cut(s)	391, 1069
TspRI	CASTG	3 cut(s)	175, 358, 1147
VpaK11BI	GGWCC	1 cut(s)	399
VspI	ATTAAT	1 cut(s)	1110
XapI	RAATTY	1 cut(s)	1381
XbaI	TCTAGA	1 cut(s)	421
XspI	CTAG	3 cut(s)	153, 422, 1750
ZraI	GACGTC	1 cut(s)	73

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.