Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0344731 RchiOBHm_Chr2g0112001 RchiOBHm_Chr2g0153431 |
| rosa_laevigata | RLG00000012506 RLG00000021609 RLG00000035396 |
| rosa_multiflora | Rmu_sc0006888.1_g000019 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 361 |
| AccIII | TCCGGA | 1 cut(s) | 140 |
| AciI | CCGC | 2 cut(s) | 24, 421 |
| AclWI | GGATC | 3 cut(s) | 132, 140, 145 |
| AcoI | YGGCCR | 2 cut(s) | 91, 273 |
| AcsI | RAATTY | 1 cut(s) | 284 |
| AcuI | CTGAAG | 1 cut(s) | 154 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 430 |
| AgsI | TTSAA | 2 cut(s) | 189, 284 |
| AluBI | AGCT | 3 cut(s) | 49, 147, 280 |
| AluI | AGCT | 3 cut(s) | 49, 147, 280 |
| Alw21I | GWGCWC | 1 cut(s) | 372 |
| Alw26I | GTCTC | 1 cut(s) | 223 |
| AlwI | GGATC | 3 cut(s) | 132, 140, 145 |
| Ama87I | CYCGRG | 1 cut(s) | 220 |
| Aor13HI | TCCGGA | 1 cut(s) | 140 |
| AoxI | GGCC | 3 cut(s) | 91, 273, 402 |
| ApeKI | GCWGC | 2 cut(s) | 46, 71 |
| ApoI | RAATTY | 1 cut(s) | 284 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 101, 133 |
| AspS9I | GGNCC | 1 cut(s) | 21 |
| AsuC2I | CCSGG | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 1 cut(s) | 214 |
| AvaI | CYCGRG | 1 cut(s) | 220 |
| AvaII | GGWCC | 1 cut(s) | 21 |
| AxyI | CCTNAGG | 1 cut(s) | 306 |
| BalI | TGGCCA | 1 cut(s) | 93 |
| BamHI | GGATCC | 1 cut(s) | 137 |
| BauI | CACGAG | 1 cut(s) | 87 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| Bbv12I | GWGCWC | 1 cut(s) | 372 |
| BbvI | GCAGC | 2 cut(s) | 58, 58 |
| BccI | CCATC | 1 cut(s) | 13 |
| BceAI | ACGGC | 1 cut(s) | 288 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 96, 130 |
| BciVI | GTATCC | 1 cut(s) | 306 |
| BcnI | CCSGG | 1 cut(s) | 210 |
| BcoDI | GTCTC | 1 cut(s) | 223 |
| BfuI | GTATCC | 1 cut(s) | 306 |
| BisI | GCNGC | 3 cut(s) | 47, 72, 421 |
| BlsI | GCNGC | 3 cut(s) | 48, 73, 422 |
| Bme1390I | CCNGG | 1 cut(s) | 210 |
| Bme18I | GGWCC | 1 cut(s) | 21 |
| BmeT110I | CYCGRG | 1 cut(s) | 220 |
| BmgT120I | GGNCC | 1 cut(s) | 21 |
| BmiI | GGNNCC | 1 cut(s) | 139 |
| BmrFI | CCNGG | 1 cut(s) | 210 |
| BmrI | ACTGGG | 1 cut(s) | 173 |
| BmsI | GCATC | 1 cut(s) | 367 |
| BmuI | ACTGGG | 1 cut(s) | 173 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpmI | CTGGAG | 2 cut(s) | 256, 263 |
| Bpu10I | CCTNAGC | 1 cut(s) | 42 |
| BpuEI | CTTGAG | 1 cut(s) | 386 |
| BpuMI | CCSGG | 1 cut(s) | 210 |
| BsaI | GGTCTC | 1 cut(s) | 223 |
| BsaWI | WCCGGW | 1 cut(s) | 140 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 430 |
| Bse1I | ACTGG | 1 cut(s) | 168 |
| Bse21I | CCTNAGG | 1 cut(s) | 306 |
| BseAI | TCCGGA | 1 cut(s) | 140 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 430 |
| BseMII | CTCAG | 2 cut(s) | 33, 320 |
| BseNI | ACTGG | 1 cut(s) | 168 |
| BseRI | GAGGAG | 1 cut(s) | 294 |
| BseX3I | CGGCCG | 1 cut(s) | 273 |
| BseXI | GCAGC | 2 cut(s) | 58, 58 |
| BsgI | GTGCAG | 1 cut(s) | 144 |
| Bsh1285I | CGRYCG | 1 cut(s) | 276 |
| BshFI | GGCC | 3 cut(s) | 93, 275, 404 |
| BsiEI | CGRYCG | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 1 cut(s) | 372 |
| BsiHKCI | CYCGRG | 1 cut(s) | 220 |
| BsiSI | CCGG | 3 cut(s) | 57, 141, 209 |
| BslFI | GGGAC | 1 cut(s) | 429 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 430 |
| BsmAI | GTCTC | 1 cut(s) | 223 |
| BsmFI | GGGAC | 1 cut(s) | 429 |
| BsnI | GGCC | 3 cut(s) | 93, 275, 404 |
| Bso31I | GGTCTC | 1 cut(s) | 223 |
| BsoBI | CYCGRG | 1 cut(s) | 220 |
| Bsp1286I | GDGCHC | 1 cut(s) | 372 |
| Bsp13I | TCCGGA | 1 cut(s) | 140 |
| Bsp143I | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| BspACI | CCGC | 2 cut(s) | 24, 421 |
| BspANI | GGCC | 3 cut(s) | 93, 275, 404 |
| BspCNI | CTCAG | 2 cut(s) | 34, 319 |
| BspEI | TCCGGA | 1 cut(s) | 140 |
| BspLI | GGNNCC | 1 cut(s) | 139 |
| BspPI | GGATC | 3 cut(s) | 132, 140, 145 |
| BspTNI | GGTCTC | 1 cut(s) | 223 |
| BsrI | ACTGG | 1 cut(s) | 168 |
| BssMI | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| BssSI | CACGAG | 1 cut(s) | 87 |
| Bst2BI | CACGAG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 1 cut(s) | 341 |
| BstC8I | GCNNGC | 1 cut(s) | 149 |
| BstDEI | CTNAG | 3 cut(s) | 42, 306, 477 |
| BstKTI | GATC | 5 cut(s) | 116, 123, 135, 140, 428 |
| BstMAI | GTCTC | 1 cut(s) | 223 |
| BstMBI | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| BstMCI | CGRYCG | 1 cut(s) | 276 |
| BstSCI | CCNGG | 1 cut(s) | 208 |
| BstV1I | GCAGC | 2 cut(s) | 58, 58 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| BstX2I | RGATCY | 1 cut(s) | 137 |
| BstYI | RGATCY | 1 cut(s) | 137 |
| BstZI | CGGCCG | 1 cut(s) | 273 |
| Bsu36I | CCTNAGG | 1 cut(s) | 306 |
| BsuI | GTATCC | 1 cut(s) | 306 |
| BsuRI | GGCC | 3 cut(s) | 93, 275, 404 |
| BtsIMutI | CAGTG | 2 cut(s) | 161, 346 |
| Cac8I | GCNNGC | 1 cut(s) | 149 |
| Cfr13I | GGNCC | 1 cut(s) | 21 |
| CseI | GACGC | 3 cut(s) | 77, 369, 431 |
| CviJI | RGCY | 9 cut(s) | 49, 93, 147, 168, 241, 275, 280, 331, 404 |
| CviKI_1 | RGCY | 9 cut(s) | 49, 93, 147, 168, 241, 275, 280, 331, 404 |
| DdeI | CTNAG | 3 cut(s) | 42, 306, 477 |
| DpnI | GATC | 5 cut(s) | 115, 122, 134, 139, 427 |
| DpnII | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| EaeI | YGGCCR | 2 cut(s) | 91, 273 |
| EagI | CGGCCG | 1 cut(s) | 273 |
| EclXI | CGGCCG | 1 cut(s) | 273 |
| Eco31I | GGTCTC | 1 cut(s) | 223 |
| Eco47I | GGWCC | 1 cut(s) | 21 |
| Eco52I | CGGCCG | 1 cut(s) | 273 |
| Eco57I | CTGAAG | 1 cut(s) | 154 |
| Eco81I | CCTNAGG | 1 cut(s) | 306 |
| Eco88I | CYCGRG | 1 cut(s) | 220 |
| EcoRI | GAATTC | 1 cut(s) | 284 |
| FaiI | YATR | 4 cut(s) | 96, 264, 407, 409 |
| FaqI | GGGAC | 1 cut(s) | 429 |
| FblI | GTMKAC | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 3 cut(s) | 47, 72, 421 |
| Fsp4HI | GCNGC | 3 cut(s) | 47, 72, 421 |
| GluI | GCNGC | 3 cut(s) | 47, 72, 421 |
| GsuI | CTGGAG | 2 cut(s) | 256, 263 |
| HaeIII | GGCC | 3 cut(s) | 93, 275, 404 |
| HapII | CCGG | 3 cut(s) | 57, 141, 209 |
| HgaI | GACGC | 3 cut(s) | 77, 369, 431 |
| HinfI | GANTC | 1 cut(s) | 223 |
| HpaII | CCGG | 3 cut(s) | 57, 141, 209 |
| HphI | GGTGA | 1 cut(s) | 214 |
| Hpy166II | GTNNAC | 2 cut(s) | 259, 362 |
| Hpy188I | TCNGA | 1 cut(s) | 137 |
| Hpy188III | TCNNGA | 3 cut(s) | 141, 220, 431 |
| Hpy8I | GTNNAC | 2 cut(s) | 259, 362 |
| Hpy99I | CGWCG | 3 cut(s) | 19, 121, 199 |
| HpyAV | CCTTC | 1 cut(s) | 309 |
| HpyCH4III | ACNGT | 1 cut(s) | 341 |
| HpyCH4IV | ACGT | 1 cut(s) | 317 |
| HpyCH4V | TGCA | 1 cut(s) | 161 |
| HpyF3I | CTNAG | 3 cut(s) | 42, 306, 477 |
| HpySE526I | ACGT | 1 cut(s) | 317 |
| Kpn2I | TCCGGA | 1 cut(s) | 140 |
| Kzo9I | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| LmnI | GCTCC | 1 cut(s) | 244 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 58 |
| LweI | GCATC | 1 cut(s) | 367 |
| MaeII | ACGT | 1 cut(s) | 317 |
| MaeIII | GTNAC | 1 cut(s) | 335 |
| MalI | GATC | 5 cut(s) | 115, 122, 134, 139, 427 |
| MboI | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| MboII | GAAGA | 1 cut(s) | 177 |
| MflI | RGATCY | 1 cut(s) | 137 |
| MhlI | GDGCHC | 1 cut(s) | 372 |
| MlsI | TGGCCA | 1 cut(s) | 93 |
| MluCI | AATT | 1 cut(s) | 284 |
| MluNI | TGGCCA | 1 cut(s) | 93 |
| MlyI | GAGTC | 1 cut(s) | 232 |
| MnlI | CCTC | 7 cut(s) | 12, 58, 231, 315, 356, 394, 479 |
| Mox20I | TGGCCA | 1 cut(s) | 93 |
| MroI | TCCGGA | 1 cut(s) | 140 |
| MscI | TGGCCA | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 1 cut(s) | 375 |
| Msp20I | TGGCCA | 1 cut(s) | 93 |
| MspI | CCGG | 3 cut(s) | 57, 141, 209 |
| MspR9I | CCNGG | 1 cut(s) | 210 |
| NciI | CCSGG | 1 cut(s) | 210 |
| NdeII | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| NlaIV | GGNNCC | 1 cut(s) | 139 |
| NmeAIII | GCCGAG | 1 cut(s) | 301 |
| PaeR7I | CTCGAG | 1 cut(s) | 220 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 14 |
| PflFI | GACNNNGTC | 1 cut(s) | 19 |
| PkrI | GCNGC | 3 cut(s) | 48, 73, 422 |
| PleI | GAGTC | 1 cut(s) | 231 |
| PpsI | GAGTC | 1 cut(s) | 231 |
| PspN4I | GGNNCC | 1 cut(s) | 139 |
| PspPI | GGNCC | 1 cut(s) | 21 |
| PsuI | RGATCY | 1 cut(s) | 137 |
| PsyI | GACNNNGTC | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 375 |
| SatI | GCNGC | 3 cut(s) | 47, 72, 421 |
| Sau3AI | GATC | 5 cut(s) | 113, 120, 132, 137, 425 |
| Sau96I | GGNCC | 1 cut(s) | 21 |
| SchI | GAGTC | 1 cut(s) | 232 |
| ScrFI | CCNGG | 1 cut(s) | 210 |
| SduI | GDGCHC | 1 cut(s) | 372 |
| SetI | ASST | 6 cut(s) | 23, 51, 149, 282, 312, 320 |
| SfaNI | GCATC | 1 cut(s) | 367 |
| Sfr274I | CTCGAG | 1 cut(s) | 220 |
| SinI | GGWCC | 1 cut(s) | 21 |
| SlaI | CTCGAG | 1 cut(s) | 220 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 375 |
| SmlI | CTYRAG | 2 cut(s) | 220, 365 |
| SmoI | CTYRAG | 2 cut(s) | 220, 365 |
| Sse9I | AATT | 1 cut(s) | 284 |
| SsiI | CCGC | 2 cut(s) | 24, 421 |
| StyD4I | CCNGG | 1 cut(s) | 208 |
| TaaI | ACNGT | 1 cut(s) | 341 |
| TaiI | ACGT | 1 cut(s) | 320 |
| TaqI | TCGA | 3 cut(s) | 14, 119, 221 |
| TasI | AATT | 1 cut(s) | 284 |
| TauI | GCSGC | 1 cut(s) | 423 |
| TscAI | CASTG | 2 cut(s) | 168, 346 |
| TseI | GCWGC | 2 cut(s) | 46, 71 |
| TspRI | CASTG | 2 cut(s) | 168, 346 |
| Tth111I | GACNNNGTC | 1 cut(s) | 19 |
| VpaK11BI | GGWCC | 1 cut(s) | 21 |
| XapI | RAATTY | 1 cut(s) | 284 |
| XhoI | CTCGAG | 1 cut(s) | 220 |
| XmiI | GTMKAC | 1 cut(s) | 361 |