Rmu_sc0007498.1_g000001

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007498.1
Physical Location & Seq
Reverse (-)
1 .. 4620
4620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007498.1_g000001.1.cds

Sequence Viewer

Length: 363 bp
atgattaaggtgaatgctcttaccgggaaagaaattgagattgatattgaaccgactgacaccattgaccgaatgaaggaaaaggttgaggagaaagagggaattcctccggtgcaacaaagcactaatgggtatgtcatcggacttgacctcagcagcgagtttgtttcatgcaaaattgacaattccagcagtctcttccaacttcaacatcttgagagcctcaatttggccaataatgtcttcaatggctctcaaattccatctgcaattggagagcttacaaatctgaggtatctaaatttagccagtggtttctattccgggcaaattcccattgagatttcacgcttgacaaggttg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.4

Weight (kDa)

4.69

Isoelectric Point (pI)

46.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019700)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g19670
malus_domestica MD00G1124100.v1.1 MD04G1039800.v1.1
prunus_persica Prupe.4G284500_v2.0.a1 Prupe.4G284500_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0484661
rosa_multiflora Rmu_sc0007498.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 4 cut(s) 102, 258, 301, 330
AfiI CCNNNNNNNGG 2 cut(s) 76, 229
AgsI TTSAA 3 cut(s) 50, 209, 247
AjuI GAANNNNNNNTTGG 2 cut(s) 227, 259
AluBI AGCT 1 cut(s) 280
AluI AGCT 1 cut(s) 280
Alw26I GTCTC 1 cut(s) 200
AoxI GGCC 1 cut(s) 231
ApeKI GCWGC 1 cut(s) 156
ApoI RAATTY 4 cut(s) 102, 258, 301, 330
AsuC2I CCSGG 2 cut(s) 25, 325
AsuHPI GGTGA 1 cut(s) 22
BalI TGGCCA 1 cut(s) 233
BbsI GAAGAC 1 cut(s) 235
BbvCI CCTCAGC 1 cut(s) 152
BbvI GCAGC 1 cut(s) 168
BccI CCATC 1 cut(s) 271
BcnI CCSGG 2 cut(s) 25, 325
BcoDI GTCTC 1 cut(s) 200
BisI GCNGC 1 cut(s) 157
BlsI GCNGC 1 cut(s) 158
Bme1390I CCNGG 2 cut(s) 25, 325
BmrFI CCNGG 2 cut(s) 25, 325
BpiI GAAGAC 1 cut(s) 235
Bpu10I CCTNAGC 1 cut(s) 152
BpuEI CTTGAG 1 cut(s) 236
BpuMI CCSGG 2 cut(s) 25, 325
BsaWI WCCGGW 1 cut(s) 109
Bsc4I CCNNNNNNNGG 2 cut(s) 76, 229
Bse1I ACTGG 1 cut(s) 309
BseLI CCNNNNNNNGG 2 cut(s) 76, 229
BseMII CTCAG 2 cut(s) 166, 281
BseNI ACTGG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 104
BseXI GCAGC 1 cut(s) 168
BshFI GGCC 1 cut(s) 233
BsiSI CCGG 3 cut(s) 24, 110, 324
BslI CCNNNNNNNGG 2 cut(s) 76, 229
BsmAI GTCTC 1 cut(s) 200
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 1 cut(s) 233
BspANI GGCC 1 cut(s) 233
BspCNI CTCAG 2 cut(s) 165, 282
BsrI ACTGG 1 cut(s) 309
Bst6I CTCTTC 1 cut(s) 203
BstDEI CTNAG 2 cut(s) 152, 290
BstMAI GTCTC 1 cut(s) 200
BstSCI CCNGG 2 cut(s) 23, 323
BstV1I GCAGC 1 cut(s) 168
BstV2I GAAGAC 1 cut(s) 235
BsuRI GGCC 1 cut(s) 233
BtsIMutI CAGTG 1 cut(s) 316
CviAII CATG 1 cut(s) 171
CviJI RGCY 5 cut(s) 222, 233, 252, 280, 308
CviKI_1 RGCY 5 cut(s) 222, 233, 252, 280, 308
DdeI CTNAG 2 cut(s) 152, 290
EaeI YGGCCR 1 cut(s) 231
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 102
FaeI CATG 1 cut(s) 174
FaiI YATR 2 cut(s) 135, 172
FatI CATG 1 cut(s) 170
Fnu4HI GCNGC 1 cut(s) 157
Fsp4HI GCNGC 1 cut(s) 157
GluI GCNGC 1 cut(s) 157
HaeIII GGCC 1 cut(s) 233
HapII CCGG 3 cut(s) 24, 110, 324
Hin1II CATG 1 cut(s) 174
HpaII CCGG 3 cut(s) 24, 110, 324
HphI GGTGA 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 143, 291
Hpy188III TCNNGA 1 cut(s) 215
HpyAV CCTTC 1 cut(s) 70
HpyCH4V TGCA 3 cut(s) 115, 174, 269
HpyF3I CTNAG 2 cut(s) 152, 290
Hsp92II CATG 1 cut(s) 174
LpnPI CCDG 5 cut(s) 37, 123, 202, 322, 337
Lsp1109I GCAGC 1 cut(s) 168
MboII GAAGA 2 cut(s) 190, 235
MfeI CAATTG 1 cut(s) 270
MlsI TGGCCA 1 cut(s) 233
MluCI AATT 9 cut(s) 33, 102, 177, 184, 226, 258, 270, 301, 330
MluNI TGGCCA 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 226
MnlI CCTC 6 cut(s) 82, 91, 117, 161, 233, 285
Mox20I TGGCCA 1 cut(s) 233
MscI TGGCCA 1 cut(s) 233
MseI TTAA 1 cut(s) 6
Msp20I TGGCCA 1 cut(s) 233
MspI CCGG 3 cut(s) 24, 110, 324
MspR9I CCNGG 2 cut(s) 25, 325
MunI CAATTG 1 cut(s) 270
Mva1269I GAATGC 1 cut(s) 19
NciI CCSGG 2 cut(s) 25, 325
NlaIII CATG 1 cut(s) 174
PctI GAATGC 1 cut(s) 19
PkrI GCNGC 1 cut(s) 158
SaqAI TTAA 1 cut(s) 6
SatI GCNGC 1 cut(s) 157
ScrFI CCNGG 2 cut(s) 25, 325
SetI ASST 6 cut(s) 12, 87, 153, 282, 296, 362
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
Sse9I AATT 9 cut(s) 33, 102, 177, 184, 226, 258, 270, 301, 330
StyD4I CCNGG 2 cut(s) 23, 323
TaqII GACCGA 1 cut(s) 84
TasI AATT 9 cut(s) 33, 102, 177, 184, 226, 258, 270, 301, 330
Tru1I TTAA 1 cut(s) 6
Tru9I TTAA 1 cut(s) 6
TscAI CASTG 1 cut(s) 316
TseI GCWGC 1 cut(s) 156
TspDTI ATGAA 2 cut(s) 89, 159
TspRI CASTG 1 cut(s) 316
XapI RAATTY 4 cut(s) 102, 258, 301, 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.