DNA polymerase processivity factor activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g20850 |
| rosa_chinensis | RchiOBHm_Chr1g0365091 |
| rosa_laevigata | RLG00000027445 |
| rosa_multiflora | Rmu_sc0008025.1_g000005 Rmu_ssc0000112.1_g000005 |
| rosa_rugosa | Rorug01G0319500 |
| rosa_samantha | Rh1BG289900 Rh1CG306600 Rh1DG321500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 338 |
| AatII | GACGTC | 1 cut(s) | 342 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 196 |
| AccII | CGCG | 1 cut(s) | 124 |
| AciI | CCGC | 2 cut(s) | 229, 323 |
| AclWI | GGATC | 3 cut(s) | 194, 207, 304 |
| AcoI | YGGCCR | 2 cut(s) | 146, 303 |
| AcsI | RAATTY | 1 cut(s) | 39 |
| AcyI | GRCGYC | 3 cut(s) | 108, 243, 339 |
| AfaI | GTAC | 1 cut(s) | 375 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 196, 301 |
| AgsI | TTSAA | 2 cut(s) | 20, 250 |
| AluBI | AGCT | 5 cut(s) | 133, 157, 181, 207, 383 |
| AluI | AGCT | 5 cut(s) | 133, 157, 181, 207, 383 |
| Alw21I | GWGCWC | 3 cut(s) | 135, 159, 183 |
| Alw26I | GTCTC | 3 cut(s) | 50, 83, 219 |
| AlwI | GGATC | 3 cut(s) | 194, 207, 304 |
| AoxI | GGCC | 4 cut(s) | 146, 222, 269, 303 |
| ApoI | RAATTY | 1 cut(s) | 39 |
| AspS9I | GGNCC | 2 cut(s) | 28, 270 |
| AsuHPI | GGTGA | 3 cut(s) | 79, 334, 373 |
| AsuII | TTCGAA | 1 cut(s) | 392 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BalI | TGGCCA | 2 cut(s) | 148, 305 |
| BamHI | GGATCC | 1 cut(s) | 199 |
| BanII | GRGCYC | 3 cut(s) | 135, 159, 183 |
| Bbv12I | GWGCWC | 3 cut(s) | 135, 159, 183 |
| BccI | CCATC | 3 cut(s) | 281, 352, 353 |
| BcoDI | GTCTC | 3 cut(s) | 50, 83, 219 |
| BisI | GCNGC | 2 cut(s) | 230, 324 |
| BlsI | GCNGC | 2 cut(s) | 231, 325 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmgT120I | GGNCC | 2 cut(s) | 28, 270 |
| BmiI | GGNNCC | 1 cut(s) | 201 |
| BmsI | GCATC | 2 cut(s) | 32, 410 |
| Bpu14I | TTCGAA | 1 cut(s) | 392 |
| BpuEI | CTTGAG | 1 cut(s) | 17 |
| BsaHI | GRCGYC | 3 cut(s) | 108, 243, 339 |
| BsaJI | CCNNGG | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 196, 301 |
| BseDI | CCNNGG | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 196, 301 |
| BseMII | CTCAG | 3 cut(s) | 25, 120, 247 |
| BseYI | CCCAGC | 1 cut(s) | 203 |
| Bsh1236I | CGCG | 1 cut(s) | 124 |
| Bsh1285I | CGRYCG | 1 cut(s) | 268 |
| BshFI | GGCC | 4 cut(s) | 148, 224, 271, 305 |
| BsiEI | CGRYCG | 1 cut(s) | 268 |
| BsiHKAI | GWGCWC | 3 cut(s) | 135, 159, 183 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 196, 301 |
| BsmAI | GTCTC | 3 cut(s) | 50, 83, 219 |
| BsmBI | CGTCTC | 2 cut(s) | 50, 83 |
| BsnI | GGCC | 4 cut(s) | 148, 224, 271, 305 |
| Bsp119I | TTCGAA | 1 cut(s) | 392 |
| Bsp1286I | GDGCHC | 3 cut(s) | 135, 159, 183 |
| Bsp143I | GATC | 3 cut(s) | 199, 265, 309 |
| Bsp68I | TCGCGA | 1 cut(s) | 124 |
| BspACI | CCGC | 2 cut(s) | 229, 323 |
| BspANI | GGCC | 4 cut(s) | 148, 224, 271, 305 |
| BspCNI | CTCAG | 3 cut(s) | 24, 121, 246 |
| BspFNI | CGCG | 1 cut(s) | 124 |
| BspLI | GGNNCC | 1 cut(s) | 201 |
| BspPI | GGATC | 3 cut(s) | 194, 207, 304 |
| BspQI | GCTCTTC | 1 cut(s) | 164 |
| BspT104I | TTCGAA | 1 cut(s) | 392 |
| BssECI | CCNNGG | 1 cut(s) | 195 |
| BssMI | GATC | 3 cut(s) | 199, 265, 309 |
| BssNI | GRCGYC | 3 cut(s) | 108, 243, 339 |
| BssT1I | CCWWGG | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 1 cut(s) | 378 |
| Bst6I | CTCTTC | 1 cut(s) | 164 |
| BstACI | GRCGYC | 3 cut(s) | 108, 243, 339 |
| BstBI | TTCGAA | 1 cut(s) | 392 |
| BstC8I | GCNNGC | 3 cut(s) | 77, 122, 170 |
| BstDEI | CTNAG | 3 cut(s) | 11, 129, 233 |
| BstFNI | CGCG | 1 cut(s) | 124 |
| BstKTI | GATC | 3 cut(s) | 202, 268, 312 |
| BstMAI | GTCTC | 3 cut(s) | 50, 83, 219 |
| BstMBI | GATC | 3 cut(s) | 199, 265, 309 |
| BstMCI | CGRYCG | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 130, 154, 178 |
| BstUI | CGCG | 1 cut(s) | 124 |
| BstX2I | RGATCY | 2 cut(s) | 199, 309 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 280 |
| BstYI | RGATCY | 2 cut(s) | 199, 309 |
| BsuRI | GGCC | 4 cut(s) | 148, 224, 271, 305 |
| BtuMI | TCGCGA | 1 cut(s) | 124 |
| Cac8I | GCNNGC | 3 cut(s) | 77, 122, 170 |
| Cfr13I | GGNCC | 2 cut(s) | 28, 270 |
| CseI | GACGC | 2 cut(s) | 97, 251 |
| Csp6I | GTAC | 1 cut(s) | 374 |
| CviAII | CATG | 3 cut(s) | 52, 301, 387 |
| CviQI | GTAC | 1 cut(s) | 374 |
| DdeI | CTNAG | 3 cut(s) | 11, 129, 233 |
| DpnI | GATC | 3 cut(s) | 201, 267, 311 |
| DpnII | GATC | 3 cut(s) | 199, 265, 309 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 338 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 338 |
| EaeI | YGGCCR | 2 cut(s) | 146, 303 |
| Eam1104I | CTCTTC | 1 cut(s) | 164 |
| EarI | CTCTTC | 1 cut(s) | 164 |
| Ecl136II | GAGCTC | 3 cut(s) | 133, 157, 181 |
| Eco130I | CCWWGG | 1 cut(s) | 195 |
| Eco24I | GRGCYC | 3 cut(s) | 135, 159, 183 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 3 cut(s) | 133, 157, 181 |
| EcoICRI | GAGCTC | 3 cut(s) | 133, 157, 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 195 |
| EcoT38I | GRGCYC | 3 cut(s) | 135, 159, 183 |
| ErhI | CCWWGG | 1 cut(s) | 195 |
| Esp3I | CGTCTC | 2 cut(s) | 50, 83 |
| FaeI | CATG | 3 cut(s) | 55, 304, 390 |
| FaiI | YATR | 5 cut(s) | 53, 105, 302, 388, 416 |
| FatI | CATG | 3 cut(s) | 51, 300, 386 |
| Fnu4HI | GCNGC | 2 cut(s) | 230, 324 |
| FriOI | GRGCYC | 3 cut(s) | 135, 159, 183 |
| Fsp4HI | GCNGC | 2 cut(s) | 230, 324 |
| GluI | GCNGC | 2 cut(s) | 230, 324 |
| GsaI | CCCAGC | 1 cut(s) | 207 |
| HaeIII | GGCC | 4 cut(s) | 148, 224, 271, 305 |
| HgaI | GACGC | 2 cut(s) | 97, 251 |
| Hin1I | GRCGYC | 3 cut(s) | 108, 243, 339 |
| Hin1II | CATG | 3 cut(s) | 55, 304, 390 |
| HincII | GTYRAC | 1 cut(s) | 112 |
| HindII | GTYRAC | 1 cut(s) | 112 |
| HphI | GGTGA | 3 cut(s) | 79, 334, 373 |
| Hpy166II | GTNNAC | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 2 cut(s) | 14, 236 |
| Hpy188III | TCNNGA | 2 cut(s) | 88, 123 |
| Hpy8I | GTNNAC | 1 cut(s) | 112 |
| Hpy99I | CGWCG | 3 cut(s) | 335, 338, 341 |
| HpyAV | CCTTC | 3 cut(s) | 58, 91, 256 |
| HpyCH4III | ACNGT | 1 cut(s) | 378 |
| HpyCH4IV | ACGT | 1 cut(s) | 339 |
| HpyCH4V | TGCA | 1 cut(s) | 423 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 130, 154, 178 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 129, 233 |
| HpySE526I | ACGT | 1 cut(s) | 339 |
| Hsp92I | GRCGYC | 3 cut(s) | 108, 243, 339 |
| Hsp92II | CATG | 3 cut(s) | 55, 304, 390 |
| Kzo9I | GATC | 3 cut(s) | 199, 265, 309 |
| LguI | GCTCTTC | 1 cut(s) | 164 |
| LpnPI | CCDG | 5 cut(s) | 29, 203, 217, 252, 334 |
| LweI | GCATC | 2 cut(s) | 32, 410 |
| MaeII | ACGT | 1 cut(s) | 339 |
| MaeIII | GTNAC | 2 cut(s) | 340, 397 |
| MalI | GATC | 3 cut(s) | 201, 267, 311 |
| MboI | GATC | 3 cut(s) | 199, 265, 309 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MflI | RGATCY | 2 cut(s) | 199, 309 |
| MhlI | GDGCHC | 3 cut(s) | 135, 159, 183 |
| MlsI | TGGCCA | 2 cut(s) | 148, 305 |
| MluCI | AATT | 3 cut(s) | 39, 80, 285 |
| MluNI | TGGCCA | 2 cut(s) | 148, 305 |
| MnlI | CCTC | 4 cut(s) | 41, 197, 302, 323 |
| Mox20I | TGGCCA | 2 cut(s) | 148, 305 |
| MscI | TGGCCA | 2 cut(s) | 148, 305 |
| Msp20I | TGGCCA | 2 cut(s) | 148, 305 |
| MvnI | CGCG | 1 cut(s) | 124 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 130, 154, 178 |
| NdeII | GATC | 3 cut(s) | 199, 265, 309 |
| NlaIII | CATG | 3 cut(s) | 55, 304, 390 |
| NlaIV | GGNNCC | 1 cut(s) | 201 |
| NmuCI | GTSAC | 2 cut(s) | 340, 397 |
| NruI | TCGCGA | 1 cut(s) | 124 |
| NspV | TTCGAA | 1 cut(s) | 392 |
| PciSI | GCTCTTC | 1 cut(s) | 164 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 336 |
| PflFI | GACNNNGTC | 1 cut(s) | 338 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 196 |
| PkrI | GCNGC | 2 cut(s) | 231, 325 |
| Ple19I | CGATCG | 1 cut(s) | 268 |
| Psp124BI | GAGCTC | 3 cut(s) | 135, 159, 183 |
| PspFI | CCCAGC | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 1 cut(s) | 201 |
| PspPI | GGNCC | 2 cut(s) | 28, 270 |
| PsuI | RGATCY | 2 cut(s) | 199, 309 |
| PsyI | GACNNNGTC | 1 cut(s) | 338 |
| PvuI | CGATCG | 1 cut(s) | 268 |
| RruI | TCGCGA | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 375 |
| RsaNI | GTAC | 1 cut(s) | 374 |
| SacI | GAGCTC | 3 cut(s) | 135, 159, 183 |
| SapI | GCTCTTC | 1 cut(s) | 164 |
| SatI | GCNGC | 2 cut(s) | 230, 324 |
| Sau3AI | GATC | 3 cut(s) | 199, 265, 309 |
| Sau96I | GGNCC | 2 cut(s) | 28, 270 |
| SduI | GDGCHC | 3 cut(s) | 135, 159, 183 |
| SetI | ASST | 9 cut(s) | 69, 102, 135, 159, 183, 209, 241, 342, 385 |
| SfaNI | GCATC | 2 cut(s) | 32, 410 |
| SfuI | TTCGAA | 1 cut(s) | 392 |
| SinI | GGWCC | 1 cut(s) | 28 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| Sse9I | AATT | 3 cut(s) | 39, 80, 285 |
| SsiI | CCGC | 2 cut(s) | 229, 323 |
| SstI | GAGCTC | 3 cut(s) | 135, 159, 183 |
| StyI | CCWWGG | 1 cut(s) | 195 |
| TaaI | ACNGT | 1 cut(s) | 378 |
| TaiI | ACGT | 1 cut(s) | 342 |
| TaqI | TCGA | 3 cut(s) | 87, 162, 392 |
| TaqII | GACCGA | 1 cut(s) | 16 |
| TasI | AATT | 3 cut(s) | 39, 80, 285 |
| TauI | GCSGC | 2 cut(s) | 232, 326 |
| TseFI | GTSAC | 2 cut(s) | 340, 397 |
| Tsp45I | GTSAC | 2 cut(s) | 340, 397 |
| TspDTI | ATGAA | 5 cut(s) | 40, 73, 77, 110, 375 |
| Tth111I | GACNNNGTC | 1 cut(s) | 338 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 196 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 39 |
| ZraI | GACGTC | 1 cut(s) | 340 |