Rorug01G0319500

DNA polymerase processivity factor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0018874
Physical Location & Seq
Forward (+)
43818528 .. 43820010
1483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0319500.1

Sequence Viewer

Length: 1212 bp
ATGGCGCATGCGAATACTAGTGCTATGACTGCTCGGGTTCAGTCAGATTCTGCAAGGGTGACTCTGGGCGCGGAAGACGCGGCTGCTTTGCAGGACAACCATTGGCGGGACTCTCTGTCCACGACGCCGGTGATCGATTTCTTTTTTCAGTTTGACCATGCGGCTGACCACAATCGGGCGTTGCATGGGGGACCATGGTTATATAGAAATACGATGCTGGTGGCCGGCGAGTATGATGGGGTTGGATCTGTTGTGACAGTTCCGTTATGGAAGATCGAACTCTGGATGACGGCTCTTCGACGAAAGGAGGAGGAGCAAAGAATACGGCTAGTGATGGATACGCATCGTAGGGTTCGGACTTGGATGCTGTTTGAATTTTCTCCCACGGTGCAACCTGAGATTACCTTGATCTATGAGAAAGTGAAGGGTTTTTGTAGGGACTGTGGTTTATTTGAGCATGAAGCTGCAGGATGTGATGAGTTCCTGGCGAAGGAGAAAGAAGAGATCGTGAATGGTCCTCCGGAGGCGGTGTTGGCGAGCGTATCACTAGAAGTGGGTAGCACGGCTTCTGATCCTGTTTTAATTCCATTGGCGGACCAGGTGAGGATTTCGGAGGGTACCGAAGGTGGTATGGAGATTGTGGTGCAGCAGGTGAATCCGGTGGAGGATGGGTCGTTGTATGGATCCATCTTGAACGTGGAAGGCCATGCGTCACAAGAAGATGGAGGATTGGGTGGGTCCAAGCTTGGTGGACAGGTGCTTTGTTTACAACAGGGTGTCGCTGAAGCCAATGATATTGGTTGGCTTAAGAATTGGAAGGCATTGGTGCCTGATTGCACCATGGGCAAGGTATCTCCAGGGCAGGTGTTGCCAAAGTTAAAGAAATCTTCCTTGAAACTGGGACCGGAGATGGGATCATCTACTTTGGCTGTGGTGGGTACCAAGAGAAGAGCTAGCTATGATCTCATTAATGCTGGGAAGAGGTTTTTGTCCCTTCCAGCTCCTGCCCTCAAGGTGGATGAGAATATAACTTTGTTCTTCAGCATAAACATGGAAAGAAAATCTCGCAAATGGAAGAGCCATGTTGACTCATCTTCTGTGGCTGGACCCGAAAGCATGCCTAAGGAAGCAAGTATTGCTGAGGGTGAACTTATGGAGAAAGATGGAGAAATGGAAGAGGAGACGGTTGTTCCTCTTCCGGAGAATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000710 GO:0000731 GO:0000785 GO:0000790 GO:0000819 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006271 GO:0006272 GO:0006273 GO:0006275 GO:0006281 GO:0006289 GO:0006298 GO:0006301 GO:0006325 GO:0006342 GO:0006348 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007064 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019985 GO:0022402 GO:0022414 GO:0022616 GO:0030234 GO:0030337 GO:0030466 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032069 GO:0032070 GO:0032075 GO:0032077 GO:0032268 GO:0032270 GO:0032991 GO:0033260 GO:0033554 GO:0034085 GO:0034087 GO:0034641 GO:0034644 GO:0034645 GO:0034654 GO:0035753 GO:0035861 GO:0040029 GO:0042176 GO:0042276 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043570 GO:0043596 GO:0043626 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044786 GO:0044796 GO:0045732 GO:0045814 GO:0045892 GO:0045934 GO:0045935 GO:0046483 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051336 GO:0051338 GO:0051345 GO:0051347 GO:0051716 GO:0060255 GO:0061982 GO:0065007 GO:0065009 GO:0070013 GO:0070182 GO:0070914 GO:0070987 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090329 GO:0090734 GO:0097159 GO:0098772 GO:0098813 GO:0104004 GO:0140014 GO:1900262 GO:1900264 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902296 GO:1902319 GO:1902392 GO:1902394 GO:1902679 GO:1902969 GO:1902983 GO:1903021 GO:1903022 GO:1903046 GO:1903047 GO:1903362 GO:1903364 GO:1903459 GO:1903460 GO:1903506 GO:1903507 GO:1905777 GO:1905779 GO:2000112 GO:2000113 GO:2000278 GO:2000573 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03030 ko03410 ko03420 ko03430 ko04110 ko04530 ko05161 ko05166 map03030 map03410 map03420 map03430 map04110 map04530 map05161 map05166
Pfam Domains
Protein Families
PCNA_C PCNA_N

Protein Analysis

403

Amino Acids

44.09

Weight (kDa)

5.07

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018874)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g20850
rosa_chinensis RchiOBHm_Chr1g0365091
rosa_laevigata RLG00000027445
rosa_multiflora Rmu_sc0008025.1_g000005 Rmu_ssc0000112.1_g000005
rosa_rugosa Rorug01G0319500
rosa_samantha Rh1BG289900 Rh1CG306600 Rh1DG321500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 640, 853
Acc36I ACCTGC 2 cut(s) 640, 853
Acc65I GGTACC 2 cut(s) 617, 938
AccB1I GGYRCC 3 cut(s) 617, 826, 938
AccII CGCG 2 cut(s) 71, 80
AccIII TCCGGA 2 cut(s) 520, 1198
AciI CCGC 6 cut(s) 71, 80, 106, 161, 527, 593
AclWI GGATC 5 cut(s) 253, 566, 678, 691, 922
AcoI YGGCCR 1 cut(s) 222
AcsI RAATTY 1 cut(s) 374
AcuI CTGAAG 2 cut(s) 804, 1024
AcyI GRCGYC 1 cut(s) 125
AfaI GTAC 2 cut(s) 619, 940
AfiI CCNNNNNNNGG 5 cut(s) 106, 175, 490, 911, 1015
AflII CTTAAG 1 cut(s) 806
AgsI TTSAA 3 cut(s) 374, 694, 895
AhdI GACNNNNNGTC 1 cut(s) 115
AhlI ACTAGT 1 cut(s) 17
AjnI CCWGG 3 cut(s) 483, 597, 856
AluBI AGCT 5 cut(s) 464, 745, 953, 957, 1001
AluI AGCT 5 cut(s) 464, 745, 953, 957, 1001
Alw26I GTCTC 1 cut(s) 1175
AlwI GGATC 5 cut(s) 253, 566, 678, 691, 922
AlwNI CAGNNNCTG 2 cut(s) 50, 1004
Ama87I CYCGRG 1 cut(s) 33
Aor13HI TCCGGA 2 cut(s) 520, 1198
AoxI GGCC 2 cut(s) 222, 703
ApeKI GCWGC 3 cut(s) 83, 464, 646
ApoI RAATTY 1 cut(s) 374
ArsI GACNNNNNNTTYG 2 cut(s) 744, 776
AseI ATTAAT 1 cut(s) 969
Asp718I GGTACC 2 cut(s) 617, 938
AspLEI GCGC 2 cut(s) 7, 71
AspS9I GGNCC 6 cut(s) 191, 515, 595, 738, 902, 1106
AsuHPI GGTGA 5 cut(s) 70, 142, 613, 664, 1157
AsuNHI GCTAGC 1 cut(s) 953
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 6 cut(s) 191, 515, 595, 738, 902, 1106
AxyI CCTNAGG 1 cut(s) 1122
BamHI GGATCC 1 cut(s) 683
BanI GGYRCC 3 cut(s) 617, 826, 938
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbsI GAAGAC 1 cut(s) 81
BbvCI CCTCAGC 1 cut(s) 1140
BbvI GCAGC 3 cut(s) 70, 451, 658
BccI CCATC 7 cut(s) 230, 328, 662, 695, 716, 904, 1157
BceAI ACGGC 3 cut(s) 306, 341, 579
BciT130I CCWGG 3 cut(s) 485, 599, 858
BciVI GTATCC 1 cut(s) 331
BcoDI GTCTC 1 cut(s) 1175
BcuI ACTAGT 1 cut(s) 17
BfaI CTAG 4 cut(s) 18, 329, 548, 954
BfmI CTRYAG 1 cut(s) 465
BfrI CTTAAG 1 cut(s) 806
BfuAI ACCTGC 2 cut(s) 640, 853
BfuI GTATCC 1 cut(s) 331
BisI GCNGC 5 cut(s) 81, 84, 162, 465, 647
BlsI GCNGC 5 cut(s) 82, 85, 163, 466, 648
Bme1390I CCNGG 3 cut(s) 485, 599, 858
Bme18I GGWCC 6 cut(s) 191, 515, 595, 738, 902, 1106
BmeRI GACNNNNNGTC 1 cut(s) 115
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 6 cut(s) 191, 515, 595, 738, 902, 1106
BmiI GGNNCC 8 cut(s) 192, 619, 685, 739, 828, 903, 940, 1108
BmrFI CCNGG 3 cut(s) 485, 599, 858
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 3 cut(s) 204, 352, 354
BmtI GCTAGC 1 cut(s) 957
BmuI ACTGGG 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 81
BpmI CTGGAG 1 cut(s) 840
Bpu10I CCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 1 cut(s) 995
Bsa29I ATCGAT 1 cut(s) 135
BsaBI GATNNNNATC 1 cut(s) 342
BsaHI GRCGYC 1 cut(s) 125
BsaJI CCNNGG 4 cut(s) 194, 384, 840, 857
BsaWI WCCGGW 4 cut(s) 520, 658, 904, 1198
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 656, 686
Bsc4I CCNNNNNNNGG 5 cut(s) 106, 175, 490, 911, 1015
Bse118I RCCGGY 2 cut(s) 127, 224
Bse1I ACTGG 1 cut(s) 903
Bse21I CCTNAGG 1 cut(s) 1122
Bse8I GATNNNNATC 1 cut(s) 342
BseAI TCCGGA 2 cut(s) 520, 1198
BseBI CCWGG 3 cut(s) 485, 599, 858
BseCI ATCGAT 1 cut(s) 135
BseDI CCNNGG 4 cut(s) 194, 384, 840, 857
BseGI GGATG 5 cut(s) 291, 369, 476, 673, 1024
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 5 cut(s) 106, 175, 490, 911, 1015
BseMII CTCAG 2 cut(s) 387, 1131
BseNI ACTGG 1 cut(s) 903
BseRI GAGGAG 3 cut(s) 323, 326, 1193
BseXI GCAGC 3 cut(s) 70, 451, 658
BseYI CCCAGC 1 cut(s) 974
BsgI GTGCAG 1 cut(s) 665
Bsh1236I CGCG 2 cut(s) 71, 80
BshFI GGCC 2 cut(s) 224, 705
BshNI GGYRCC 3 cut(s) 617, 826, 938
BshVI ATCGAT 1 cut(s) 135
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 6 cut(s) 128, 225, 521, 659, 905, 1199
BslFI GGGAC 5 cut(s) 122, 204, 452, 915, 976
BslI CCNNNNNNNGG 5 cut(s) 106, 175, 490, 911, 1015
BsmAI GTCTC 1 cut(s) 1175
BsmBI CGTCTC 1 cut(s) 1175
BsmFI GGGAC 5 cut(s) 122, 204, 452, 915, 976
BsnI GGCC 2 cut(s) 224, 705
BsoBI CYCGRG 1 cut(s) 33
Bsp13I TCCGGA 2 cut(s) 520, 1198
Bsp143I GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
Bsp19I CCATGG 2 cut(s) 194, 840
BspACI CCGC 6 cut(s) 71, 80, 106, 161, 527, 593
BspANI GGCC 2 cut(s) 224, 705
BspCNI CTCAG 2 cut(s) 388, 1132
BspDI ATCGAT 1 cut(s) 135
BspEI TCCGGA 2 cut(s) 520, 1198
BspFNI CGCG 2 cut(s) 71, 80
BspLI GGNNCC 8 cut(s) 192, 619, 685, 739, 828, 903, 940, 1108
BspMAI CTGCAG 1 cut(s) 469
BspMI ACCTGC 2 cut(s) 640, 853
BspOI GCTAGC 1 cut(s) 957
BspPI GGATC 5 cut(s) 253, 566, 678, 691, 922
BspQI GCTCTTC 3 cut(s) 300, 943, 1070
BspT107I GGYRCC 3 cut(s) 617, 826, 938
BspTI CTTAAG 1 cut(s) 806
BsrFI RCCGGY 2 cut(s) 127, 224
BsrI ACTGG 1 cut(s) 903
BssAI RCCGGY 2 cut(s) 127, 224
BssECI CCNNGG 4 cut(s) 194, 384, 840, 857
BssMI GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
BssNI GRCGYC 1 cut(s) 125
BssT1I CCWWGG 2 cut(s) 194, 840
Bst2UI CCWGG 3 cut(s) 485, 599, 858
Bst4CI ACNGT 4 cut(s) 259, 388, 443, 1186
Bst6I CTCTTC 7 cut(s) 300, 495, 943, 974, 1070, 1170, 1200
BstACI GRCGYC 1 cut(s) 125
BstAFI CTTAAG 1 cut(s) 806
BstAPI GCANNNNNTGC 2 cut(s) 868, 1136
BstC8I GCNNGC 5 cut(s) 9, 226, 538, 955, 1118
BstDEI CTNAG 3 cut(s) 396, 1122, 1140
BstDSI CCRYGG 3 cut(s) 194, 384, 840
BstENI CCTNNNNNAGG 1 cut(s) 488
BstF5I GGATG 5 cut(s) 291, 369, 476, 673, 1024
BstFNI CGCG 2 cut(s) 71, 80
BstHHI GCGC 2 cut(s) 7, 71
BstKTI GATC 9 cut(s) 135, 248, 276, 411, 507, 574, 686, 917, 964
BstMAI GTCTC 1 cut(s) 1175
BstMBI GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
BstMWI GCNNNNNNNGC 6 cut(s) 29, 77, 533, 843, 868, 1136
BstNI CCWGG 3 cut(s) 485, 599, 858
BstNSI RCATGY 2 cut(s) 11, 1120
BstSCI CCNGG 3 cut(s) 483, 597, 856
BstSFI CTRYAG 1 cut(s) 465
BstUI CGCG 2 cut(s) 71, 80
BstV1I GCAGC 3 cut(s) 70, 451, 658
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 245, 683
BstYI RGATCY 2 cut(s) 245, 683
Bsu15I ATCGAT 1 cut(s) 135
Bsu36I CCTNAGG 1 cut(s) 1122
BsuI GTATCC 1 cut(s) 331
BsuRI GGCC 2 cut(s) 224, 705
BsuTUI ATCGAT 1 cut(s) 135
BtgI CCRYGG 3 cut(s) 194, 384, 840
BtsCI GGATG 5 cut(s) 291, 369, 476, 673, 1024
BveI ACCTGC 2 cut(s) 640, 853
Cac8I GCNNGC 5 cut(s) 9, 226, 538, 955, 1118
CaiI CAGNNNCTG 2 cut(s) 50, 1004
CfoI GCGC 2 cut(s) 7, 71
Cfr10I RCCGGY 2 cut(s) 127, 224
Cfr13I GGNCC 6 cut(s) 191, 515, 595, 738, 902, 1106
ClaI ATCGAT 1 cut(s) 135
CseI GACGC 3 cut(s) 86, 133, 699
CsiI ACCWGGT 1 cut(s) 597
Csp6I GTAC 2 cut(s) 618, 939
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviQI GTAC 2 cut(s) 618, 939
DdeI CTNAG 3 cut(s) 396, 1122, 1140
DpnI GATC 9 cut(s) 134, 247, 275, 410, 506, 573, 685, 916, 963
DpnII GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
DriI GACNNNNNGTC 1 cut(s) 115
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 7 cut(s) 300, 495, 943, 974, 1070, 1170, 1200
Eam1105I GACNNNNNGTC 1 cut(s) 115
EarI CTCTTC 7 cut(s) 300, 495, 943, 974, 1070, 1170, 1200
EciI GGCGGA 1 cut(s) 608
Eco130I CCWWGG 2 cut(s) 194, 840
Eco47I GGWCC 6 cut(s) 191, 515, 595, 738, 902, 1106
Eco57I CTGAAG 2 cut(s) 804, 1024
Eco81I CCTNAGG 1 cut(s) 1122
Eco88I CYCGRG 1 cut(s) 33
EcoNI CCTNNNNNAGG 1 cut(s) 488
EcoRII CCWGG 3 cut(s) 483, 597, 856
EcoT14I CCWWGG 2 cut(s) 194, 840
ErhI CCWWGG 2 cut(s) 194, 840
Esp3I CGTCTC 1 cut(s) 1175
FaqI GGGAC 5 cut(s) 122, 204, 452, 915, 976
FauI CCCGC 1 cut(s) 99
Fnu4HI GCNGC 5 cut(s) 81, 84, 162, 465, 647
FokI GGATG 5 cut(s) 298, 376, 483, 680, 1031
Fsp4HI GCNGC 5 cut(s) 81, 84, 162, 465, 647
FspBI CTAG 4 cut(s) 18, 329, 548, 954
GlaI GCGC 2 cut(s) 6, 70
GluI GCNGC 5 cut(s) 81, 84, 162, 465, 647
GsaI CCCAGC 1 cut(s) 978
GsuI CTGGAG 1 cut(s) 840
HaeIII GGCC 2 cut(s) 224, 705
HapII CCGG 6 cut(s) 128, 225, 521, 659, 905, 1199
HgaI GACGC 3 cut(s) 86, 133, 699
HhaI GCGC 2 cut(s) 7, 71
Hin1I GRCGYC 1 cut(s) 125
Hin6I GCGC 2 cut(s) 5, 69
HinP1I GCGC 2 cut(s) 5, 69
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HindIII AAGCTT 1 cut(s) 743
HinfI GANTC 5 cut(s) 47, 61, 110, 655, 1088
HpaII CCGG 6 cut(s) 128, 225, 521, 659, 905, 1199
HphI GGTGA 5 cut(s) 70, 142, 613, 664, 1157
Hpy166II GTNNAC 5 cut(s) 120, 752, 767, 1087, 1148
Hpy188I TCNGA 4 cut(s) 46, 357, 571, 613
Hpy188III TCNNGA 5 cut(s) 283, 508, 521, 691, 1199
Hpy8I GTNNAC 5 cut(s) 120, 752, 767, 1087, 1148
Hpy99I CGWCG 2 cut(s) 127, 303
HpyAV CCTTC 6 cut(s) 418, 484, 617, 695, 811, 1004
HpyCH4III ACNGT 4 cut(s) 259, 388, 443, 1186
HpyCH4IV ACGT 1 cut(s) 696
HpyCH4V TGCA 7 cut(s) 53, 91, 184, 391, 467, 646, 837
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 77, 533, 843, 868, 1136
HpyF3I CTNAG 3 cut(s) 396, 1122, 1140
HpySE526I ACGT 1 cut(s) 696
Hsp92I GRCGYC 1 cut(s) 125
HspAI GCGC 2 cut(s) 5, 69
Kpn2I TCCGGA 2 cut(s) 520, 1198
KpnI GGTACC 2 cut(s) 621, 942
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Kzo9I GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
LguI GCTCTTC 3 cut(s) 300, 943, 1070
LmnI GCTCC 2 cut(s) 313, 1006
Lsp1109I GCAGC 3 cut(s) 70, 451, 658
LweI GCATC 3 cut(s) 204, 352, 354
MabI ACCWGGT 1 cut(s) 597
MaeI CTAG 4 cut(s) 18, 329, 548, 954
MaeII ACGT 1 cut(s) 696
MaeIII GTNAC 3 cut(s) 58, 253, 711
MalI GATC 9 cut(s) 134, 247, 275, 410, 506, 573, 685, 916, 963
MboI GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
MflI RGATCY 2 cut(s) 245, 683
MluCI AATT 3 cut(s) 374, 582, 811
MlyI GAGTC 3 cut(s) 55, 104, 1082
MmeI TCCRAC 1 cut(s) 223
MroI TCCGGA 2 cut(s) 520, 1198
MroNI GCCGGC 1 cut(s) 224
MseI TTAA 4 cut(s) 581, 807, 878, 969
MslI CAYNNNNRTG 1 cut(s) 1049
MspCI CTTAAG 1 cut(s) 806
MspI CCGG 6 cut(s) 128, 225, 521, 659, 905, 1199
MspR9I CCNGG 3 cut(s) 485, 599, 858
MvaI CCWGG 3 cut(s) 485, 599, 858
MvnI CGCG 2 cut(s) 71, 80
MwoI GCNNNNNNNGC 6 cut(s) 29, 77, 533, 843, 868, 1136
NaeI GCCGGC 1 cut(s) 226
NcoI CCATGG 2 cut(s) 194, 840
NdeII GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
NgoMIV GCCGGC 1 cut(s) 224
NheI GCTAGC 1 cut(s) 953
NlaIV GGNNCC 8 cut(s) 192, 619, 685, 739, 828, 903, 940, 1108
NmuCI GTSAC 3 cut(s) 58, 253, 711
NspI RCATGY 2 cut(s) 11, 1120
PaeI GCATGC 2 cut(s) 11, 1120
PaqCI CACCTGC 2 cut(s) 640, 853
PciSI GCTCTTC 3 cut(s) 300, 943, 1070
PdiI GCCGGC 1 cut(s) 226
PfeI GAWTC 2 cut(s) 47, 655
PkrI GCNGC 5 cut(s) 82, 85, 163, 466, 648
PleI GAGTC 3 cut(s) 55, 104, 1082
PpsI GAGTC 3 cut(s) 55, 104, 1082
PshBI ATTAAT 1 cut(s) 969
Psp6I CCWGG 3 cut(s) 483, 597, 856
PspFI CCCAGC 1 cut(s) 974
PspGI CCWGG 3 cut(s) 483, 597, 856
PspN4I GGNNCC 8 cut(s) 192, 619, 685, 739, 828, 903, 940, 1108
PspPI GGNCC 6 cut(s) 191, 515, 595, 738, 902, 1106
PstI CTGCAG 1 cut(s) 469
PstNI CAGNNNCTG 2 cut(s) 50, 1004
PsuI RGATCY 2 cut(s) 245, 683
RsaI GTAC 2 cut(s) 619, 940
RsaNI GTAC 2 cut(s) 618, 939
RseI CAYNNNNRTG 1 cut(s) 1049
SapI GCTCTTC 3 cut(s) 300, 943, 1070
SaqAI TTAA 4 cut(s) 581, 807, 878, 969
SatI GCNGC 5 cut(s) 81, 84, 162, 465, 647
Sau3AI GATC 9 cut(s) 132, 245, 273, 408, 504, 571, 683, 914, 961
Sau96I GGNCC 6 cut(s) 191, 515, 595, 738, 902, 1106
SchI GAGTC 3 cut(s) 55, 104, 1082
ScrFI CCNGG 3 cut(s) 485, 599, 858
SexAI ACCWGGT 1 cut(s) 597
SfaNI GCATC 3 cut(s) 204, 352, 354
SfcI CTRYAG 1 cut(s) 465
SgrAI CRCCGGYG 1 cut(s) 127
SinI GGWCC 6 cut(s) 191, 515, 595, 738, 902, 1106
SmiMI CAYNNNNRTG 1 cut(s) 1049
SmlI CTYRAG 2 cut(s) 806, 1010
SmoI CTYRAG 2 cut(s) 806, 1010
SpeI ACTAGT 1 cut(s) 17
SphI GCATGC 2 cut(s) 11, 1120
Sse9I AATT 3 cut(s) 374, 582, 811
SsiI CCGC 6 cut(s) 71, 80, 106, 161, 527, 593
SspMI CTAG 4 cut(s) 18, 329, 548, 954
StyD4I CCNGG 3 cut(s) 483, 597, 856
StyI CCWWGG 2 cut(s) 194, 840
TaaI ACNGT 4 cut(s) 259, 388, 443, 1186
TaiI ACGT 1 cut(s) 699
TaqI TCGA 3 cut(s) 135, 276, 298
TasI AATT 3 cut(s) 374, 582, 811
TauI GCSGC 2 cut(s) 83, 164
TfiI GAWTC 2 cut(s) 47, 655
Tru1I TTAA 4 cut(s) 581, 807, 878, 969
Tru9I TTAA 4 cut(s) 581, 807, 878, 969
TseFI GTSAC 3 cut(s) 58, 253, 711
TseI GCWGC 3 cut(s) 83, 464, 646
Tsp45I GTSAC 3 cut(s) 58, 253, 711
TspDTI ATGAA 1 cut(s) 474
TspGWI ACGGA 1 cut(s) 252
Vha464I CTTAAG 1 cut(s) 806
VpaK11BI GGWCC 6 cut(s) 191, 515, 595, 738, 902, 1106
VspI ATTAAT 1 cut(s) 969
XagI CCTNNNNNAGG 1 cut(s) 488
XapI RAATTY 1 cut(s) 374
XceI RCATGY 2 cut(s) 11, 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 694
XspI CTAG 4 cut(s) 18, 329, 548, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.