DNA polymerase processivity factor activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g20850 |
| rosa_chinensis | RchiOBHm_Chr1g0365091 |
| rosa_laevigata | RLG00000027445 |
| rosa_multiflora | Rmu_sc0008025.1_g000005 Rmu_ssc0000112.1_g000005 |
| rosa_rugosa | Rorug01G0319500 |
| rosa_samantha | Rh1BG289900 Rh1CG306600 Rh1DG321500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 305, 308 |
| AatII | GACGTC | 2 cut(s) | 213, 309 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 163 |
| AccII | CGCG | 1 cut(s) | 91 |
| AciI | CCGC | 4 cut(s) | 196, 226, 291, 479 |
| AclWI | GGATC | 3 cut(s) | 161, 174, 271 |
| AcoI | YGGCCR | 2 cut(s) | 113, 270 |
| AcsI | RAATTY | 1 cut(s) | 39 |
| AcuI | CTGAAG | 1 cut(s) | 405 |
| AcyI | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| AfaI | GTAC | 1 cut(s) | 536 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 268 |
| AgsI | TTSAA | 3 cut(s) | 20, 217, 457 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 209 |
| AluBI | AGCT | 7 cut(s) | 100, 124, 148, 174, 450, 473, 517 |
| AluI | AGCT | 7 cut(s) | 100, 124, 148, 174, 450, 473, 517 |
| Alw21I | GWGCWC | 3 cut(s) | 102, 126, 150 |
| Alw26I | GTCTC | 3 cut(s) | 50, 186, 513 |
| AlwI | GGATC | 3 cut(s) | 161, 174, 271 |
| AoxI | GGCC | 4 cut(s) | 113, 189, 236, 270 |
| ApeKI | GCWGC | 4 cut(s) | 228, 450, 514, 517 |
| ApoI | RAATTY | 1 cut(s) | 39 |
| AspS9I | GGNCC | 2 cut(s) | 28, 237 |
| AsuHPI | GGTGA | 1 cut(s) | 304 |
| AsuNHI | GCTAGC | 1 cut(s) | 473 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BalI | TGGCCA | 2 cut(s) | 115, 272 |
| BamHI | GGATCC | 1 cut(s) | 166 |
| BanII | GRGCYC | 3 cut(s) | 102, 126, 150 |
| BbsI | GAAGAC | 1 cut(s) | 205 |
| Bbv12I | GWGCWC | 3 cut(s) | 102, 126, 150 |
| BbvI | GCAGC | 4 cut(s) | 215, 437, 504, 526 |
| BccI | CCATC | 3 cut(s) | 248, 322, 323 |
| BceAI | ACGGC | 1 cut(s) | 445 |
| BcoDI | GTCTC | 3 cut(s) | 50, 186, 513 |
| BfaI | CTAG | 3 cut(s) | 366, 474, 610 |
| BfmI | CTRYAG | 1 cut(s) | 579 |
| BisI | GCNGC | 6 cut(s) | 197, 229, 291, 451, 515, 518 |
| BlsI | GCNGC | 6 cut(s) | 198, 230, 292, 452, 516, 519 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 209 |
| BmgT120I | GGNCC | 2 cut(s) | 28, 237 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| BmtI | GCTAGC | 1 cut(s) | 477 |
| BpiI | GAAGAC | 1 cut(s) | 205 |
| BpuEI | CTTGAG | 1 cut(s) | 17 |
| BsaHI | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| BsaJI | CCNNGG | 1 cut(s) | 162 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 268 |
| Bse118I | RCCGGY | 1 cut(s) | 424 |
| Bse1I | ACTGG | 1 cut(s) | 521 |
| BseDI | CCNNGG | 1 cut(s) | 162 |
| BseGI | GGATG | 1 cut(s) | 379 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 268 |
| BseMII | CTCAG | 2 cut(s) | 25, 214 |
| BseNI | ACTGG | 1 cut(s) | 521 |
| BseXI | GCAGC | 4 cut(s) | 215, 437, 504, 526 |
| BseYI | CCCAGC | 1 cut(s) | 170 |
| Bsh1236I | CGCG | 1 cut(s) | 91 |
| Bsh1285I | CGRYCG | 2 cut(s) | 235, 435 |
| BshFI | GGCC | 4 cut(s) | 115, 191, 238, 272 |
| BsiEI | CGRYCG | 2 cut(s) | 235, 435 |
| BsiHKAI | GWGCWC | 3 cut(s) | 102, 126, 150 |
| BsiSI | CCGG | 1 cut(s) | 425 |
| BslFI | GGGAC | 1 cut(s) | 591 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 268 |
| BsmAI | GTCTC | 3 cut(s) | 50, 186, 513 |
| BsmBI | CGTCTC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 591 |
| BsnI | GGCC | 4 cut(s) | 115, 191, 238, 272 |
| Bsp1286I | GDGCHC | 3 cut(s) | 102, 126, 150 |
| Bsp143I | GATC | 4 cut(s) | 166, 232, 276, 432 |
| Bsp68I | TCGCGA | 1 cut(s) | 91 |
| BspACI | CCGC | 4 cut(s) | 196, 226, 291, 479 |
| BspANI | GGCC | 4 cut(s) | 115, 191, 238, 272 |
| BspCNI | CTCAG | 2 cut(s) | 24, 213 |
| BspFNI | CGCG | 1 cut(s) | 91 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BspOI | GCTAGC | 1 cut(s) | 477 |
| BspPI | GGATC | 3 cut(s) | 161, 174, 271 |
| BspQI | GCTCTTC | 1 cut(s) | 131 |
| BsrFI | RCCGGY | 1 cut(s) | 424 |
| BsrI | ACTGG | 1 cut(s) | 521 |
| BssAI | RCCGGY | 1 cut(s) | 424 |
| BssECI | CCNNGG | 1 cut(s) | 162 |
| BssMI | GATC | 4 cut(s) | 166, 232, 276, 432 |
| BssNI | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| BssT1I | CCWWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 406 |
| Bst6I | CTCTTC | 1 cut(s) | 131 |
| BstACI | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| BstC8I | GCNNGC | 5 cut(s) | 89, 113, 137, 475, 479 |
| BstDEI | CTNAG | 2 cut(s) | 11, 200 |
| BstF5I | GGATG | 1 cut(s) | 379 |
| BstFNI | CGCG | 1 cut(s) | 91 |
| BstKTI | GATC | 4 cut(s) | 169, 235, 279, 435 |
| BstMAI | GTCTC | 3 cut(s) | 50, 186, 513 |
| BstMBI | GATC | 4 cut(s) | 166, 232, 276, 432 |
| BstMCI | CGRYCG | 2 cut(s) | 235, 435 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 145 |
| BstSFI | CTRYAG | 1 cut(s) | 579 |
| BstUI | CGCG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 4 cut(s) | 215, 437, 504, 526 |
| BstV2I | GAAGAC | 1 cut(s) | 205 |
| BstX2I | RGATCY | 2 cut(s) | 166, 276 |
| BstYI | RGATCY | 2 cut(s) | 166, 276 |
| BsuRI | GGCC | 4 cut(s) | 115, 191, 238, 272 |
| BtsCI | GGATG | 1 cut(s) | 379 |
| BtuMI | TCGCGA | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 5 cut(s) | 89, 113, 137, 475, 479 |
| Cfr10I | RCCGGY | 1 cut(s) | 424 |
| Cfr13I | GGNCC | 2 cut(s) | 28, 237 |
| CseI | GACGC | 3 cut(s) | 12, 64, 593 |
| Csp6I | GTAC | 1 cut(s) | 535 |
| CviAII | CATG | 2 cut(s) | 52, 268 |
| CviQI | GTAC | 1 cut(s) | 535 |
| DdeI | CTNAG | 2 cut(s) | 11, 200 |
| DpnI | GATC | 4 cut(s) | 168, 234, 278, 434 |
| DpnII | GATC | 4 cut(s) | 166, 232, 276, 432 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 305, 308 |
| DriI | GACNNNNNGTC | 1 cut(s) | 209 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 305, 308 |
| EaeI | YGGCCR | 2 cut(s) | 113, 270 |
| Eam1104I | CTCTTC | 1 cut(s) | 131 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 209 |
| EarI | CTCTTC | 1 cut(s) | 131 |
| Ecl136II | GAGCTC | 3 cut(s) | 100, 124, 148 |
| Eco130I | CCWWGG | 1 cut(s) | 162 |
| Eco24I | GRGCYC | 3 cut(s) | 102, 126, 150 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 3 cut(s) | 100, 124, 148 |
| Eco57I | CTGAAG | 1 cut(s) | 405 |
| EcoICRI | GAGCTC | 3 cut(s) | 100, 124, 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 162 |
| EcoT38I | GRGCYC | 3 cut(s) | 102, 126, 150 |
| ErhI | CCWWGG | 1 cut(s) | 162 |
| Esp3I | CGTCTC | 1 cut(s) | 50 |
| FaeI | CATG | 2 cut(s) | 55, 271 |
| FaiI | YATR | 5 cut(s) | 53, 72, 269, 410, 581 |
| FaqI | GGGAC | 1 cut(s) | 591 |
| FatI | CATG | 2 cut(s) | 51, 267 |
| FauI | CCCGC | 1 cut(s) | 486 |
| Fnu4HI | GCNGC | 6 cut(s) | 197, 229, 291, 451, 515, 518 |
| FokI | GGATG | 1 cut(s) | 386 |
| FriOI | GRGCYC | 3 cut(s) | 102, 126, 150 |
| Fsp4HI | GCNGC | 6 cut(s) | 197, 229, 291, 451, 515, 518 |
| FspBI | CTAG | 3 cut(s) | 366, 474, 610 |
| GluI | GCNGC | 6 cut(s) | 197, 229, 291, 451, 515, 518 |
| GsaI | CCCAGC | 1 cut(s) | 174 |
| HaeIII | GGCC | 4 cut(s) | 115, 191, 238, 272 |
| HapII | CCGG | 1 cut(s) | 425 |
| HgaI | GACGC | 3 cut(s) | 12, 64, 593 |
| Hin1I | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| Hin1II | CATG | 2 cut(s) | 55, 271 |
| HincII | GTYRAC | 1 cut(s) | 79 |
| HindII | GTYRAC | 1 cut(s) | 79 |
| HinfI | GANTC | 1 cut(s) | 574 |
| HpaII | CCGG | 1 cut(s) | 425 |
| HphI | GGTGA | 1 cut(s) | 304 |
| Hpy166II | GTNNAC | 3 cut(s) | 79, 343, 465 |
| Hpy188I | TCNGA | 2 cut(s) | 14, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 90 |
| Hpy8I | GTNNAC | 3 cut(s) | 79, 343, 465 |
| Hpy99I | CGWCG | 6 cut(s) | 28, 107, 302, 305, 308, 311 |
| HpyAV | CCTTC | 1 cut(s) | 58 |
| HpyCH4III | ACNGT | 1 cut(s) | 406 |
| HpyCH4IV | ACGT | 2 cut(s) | 210, 306 |
| HpyCH4V | TGCA | 1 cut(s) | 545 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 145 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 200 |
| HpySE526I | ACGT | 2 cut(s) | 210, 306 |
| Hsp92I | GRCGYC | 4 cut(s) | 75, 210, 306, 604 |
| Hsp92II | CATG | 2 cut(s) | 55, 271 |
| Kzo9I | GATC | 4 cut(s) | 166, 232, 276, 432 |
| LguI | GCTCTTC | 1 cut(s) | 131 |
| LpnPI | CCDG | 9 cut(s) | 29, 97, 170, 184, 219, 304, 396, 438, 534 |
| Lsp1109I | GCAGC | 4 cut(s) | 215, 437, 504, 526 |
| MaeI | CTAG | 3 cut(s) | 366, 474, 610 |
| MaeII | ACGT | 2 cut(s) | 210, 306 |
| MaeIII | GTNAC | 2 cut(s) | 310, 400 |
| MalI | GATC | 4 cut(s) | 168, 234, 278, 434 |
| MboI | GATC | 4 cut(s) | 166, 232, 276, 432 |
| MboII | GAAGA | 6 cut(s) | 118, 205, 398, 401, 404, 407 |
| MflI | RGATCY | 2 cut(s) | 166, 276 |
| MhlI | GDGCHC | 3 cut(s) | 102, 126, 150 |
| MlsI | TGGCCA | 2 cut(s) | 115, 272 |
| MluCI | AATT | 3 cut(s) | 39, 252, 540 |
| MluNI | TGGCCA | 2 cut(s) | 115, 272 |
| MlyI | GAGTC | 1 cut(s) | 568 |
| MnlI | CCTC | 5 cut(s) | 41, 164, 269, 290, 586 |
| Mox20I | TGGCCA | 2 cut(s) | 115, 272 |
| MscI | TGGCCA | 2 cut(s) | 115, 272 |
| MseI | TTAA | 1 cut(s) | 501 |
| Msp20I | TGGCCA | 2 cut(s) | 115, 272 |
| MspA1I | CMGCKG | 3 cut(s) | 228, 481, 517 |
| MspI | CCGG | 1 cut(s) | 425 |
| MvnI | CGCG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 97, 121, 145 |
| NdeII | GATC | 4 cut(s) | 166, 232, 276, 432 |
| NheI | GCTAGC | 1 cut(s) | 473 |
| NlaIII | CATG | 2 cut(s) | 55, 271 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| NmeAIII | GCCGAG | 1 cut(s) | 490 |
| NmuCI | GTSAC | 1 cut(s) | 310 |
| NruI | TCGCGA | 1 cut(s) | 91 |
| PciSI | GCTCTTC | 1 cut(s) | 131 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 303, 306 |
| PflFI | GACNNNGTC | 3 cut(s) | 305, 308, 603 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 163 |
| PkrI | GCNGC | 6 cut(s) | 198, 230, 292, 452, 516, 519 |
| Ple19I | CGATCG | 2 cut(s) | 235, 435 |
| PleI | GAGTC | 1 cut(s) | 568 |
| PpsI | GAGTC | 1 cut(s) | 568 |
| Psp124BI | GAGCTC | 3 cut(s) | 102, 126, 150 |
| PspFI | CCCAGC | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 2 cut(s) | 28, 237 |
| PsuI | RGATCY | 2 cut(s) | 166, 276 |
| PsyI | GACNNNGTC | 3 cut(s) | 305, 308, 603 |
| PvuI | CGATCG | 2 cut(s) | 235, 435 |
| PvuII | CAGCTG | 1 cut(s) | 517 |
| RruI | TCGCGA | 1 cut(s) | 91 |
| RsaI | GTAC | 1 cut(s) | 536 |
| RsaNI | GTAC | 1 cut(s) | 535 |
| SacI | GAGCTC | 3 cut(s) | 102, 126, 150 |
| SapI | GCTCTTC | 1 cut(s) | 131 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| SatI | GCNGC | 6 cut(s) | 197, 229, 291, 451, 515, 518 |
| Sau3AI | GATC | 4 cut(s) | 166, 232, 276, 432 |
| Sau96I | GGNCC | 2 cut(s) | 28, 237 |
| SchI | GAGTC | 1 cut(s) | 568 |
| SduI | GDGCHC | 3 cut(s) | 102, 126, 150 |
| SfcI | CTRYAG | 1 cut(s) | 579 |
| SinI | GGWCC | 1 cut(s) | 28 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| Sse9I | AATT | 3 cut(s) | 39, 252, 540 |
| SsiI | CCGC | 4 cut(s) | 196, 226, 291, 479 |
| SspMI | CTAG | 3 cut(s) | 366, 474, 610 |
| SstI | GAGCTC | 3 cut(s) | 102, 126, 150 |
| StyI | CCWWGG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 406 |
| TaiI | ACGT | 2 cut(s) | 213, 309 |
| TaqI | TCGA | 3 cut(s) | 129, 431, 435 |
| TaqII | GACCGA | 1 cut(s) | 16 |
| TasI | AATT | 3 cut(s) | 39, 252, 540 |
| TatI | WGTACW | 1 cut(s) | 534 |
| TauI | GCSGC | 2 cut(s) | 199, 293 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TseFI | GTSAC | 1 cut(s) | 310 |
| TseI | GCWGC | 4 cut(s) | 228, 450, 514, 517 |
| Tsp45I | GTSAC | 1 cut(s) | 310 |
| TspDTI | ATGAA | 3 cut(s) | 40, 77, 431 |
| TspGWI | ACGGA | 1 cut(s) | 612 |
| Tth111I | GACNNNGTC | 3 cut(s) | 305, 308, 603 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 163 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 39 |
| XspI | CTAG | 3 cut(s) | 366, 474, 610 |
| ZraI | GACGTC | 2 cut(s) | 211, 307 |