Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009286.1

Orthogroup ID

OG0018832

Physical Location & Seq

Genomic Coordinates Reverse (-)

25002 .. 42275

Gene Structure 17274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009286.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3117 bp

atgcaggggctgcgacgacggagcgaatcgggccggacggaggccggaggcatcccagacagcttctgggcagcgatcgaggtcggaggaggtctaggttgcaggtttctgggcaacgacctcacctgcaactgcaggtttctaggtagtgctgcaaccacgtcgctccgtgcgactgcagaccgattagtgttcggcaagccccgcctctccgtcgcgtccttagcccagctgcagcgtcgacgtccgcactttagcgaaagtgcggacgtcatctttggaacggctccatgtgtttaccactacggtttggttgagaattgcggtgagggatgggaagccgagtttgagaaagggagagaggtggtgttgcatgttgatgagtctaggcgcaagcttaattctaggcttcactcagctgggcatttgctagatgtgtgtatgaagaatgtgggattgggtgatttaaagccaggcaaagcctaccatttccctcaagggtatgatttacttcattgtctaccgcctagttttagaagtcatggttatgtttcttatctttcttttattagtgaagtatctgtagatcctctcaatccggacatgtacccagattgggtaagacatgccattgatgagaaggattgcgagggggagaagttcgagtccatcaacaatttggacagaaacttgacggcgccgagttggactagtttcaccttcaggcgttctggcaccaaaacggtgatgaggcaagacaatttggcgttattagggtcgaatccttttccggtaacaccccatccctctcggcgatcaggagcttggaccctacgctcacggcgatcgattccagaactgttggagaagcagcagcagagaagccaagcattctccgccgccagcgccggtgctgttcttcttcaacatcaatctcatcaattcatcagagtctttagtatacaaattctcacaaatgggcgacgcttcgactccgattcgagcgaggagagagagattcactcggctgtcgtggtttaccactacggtttggttgagaattgcggtgagggatgggaagccgagtttgagaaagggagagaggtggtgttgcatgttgatgagtctaggcgcaagcttaattctaggcttcactcagctgggcatttgctagatgtgtgtatgaagaatgtgggattgggtgatttaaagccaggcaaagcctaccatttccctcaagggccatatgtggaatatataggcatagttccacagaaagatgtgcaaagtaagcagaaagagttggagttagaagctaatgcattgatatcgagaggagggaaggtctttgttgcatcagtaccatatgaagaagcatgtaagctgtgtggtgaatgtcttcccgattacattccaaaggacagcactcctcgtattgtgaagatggggaccaatccgggctgcccgtgtggtggtactcatgtttctgatgtttcagagatcatcagtgttacagtttaccactacggtttggttgagaattgcggtgagggatgggaagccgagtttgagaaagggagagaggtggtgttgcatgttgatgagtctaggcgcaagcttaattctaggcttcactcagctgggcatttgctagatgtgtgtatgaagaatgtgggattgggtgatttaaagccaggcaaagcctaccatttccctcaaggttgtgttgttggatacaatgttgtcatggtttgcaaatccttgtggttgaatctagcacttataaatgtacctgttgccaggccatatgtggaatatataggcatagttccacagaaagatgtgcaaagtaagcagaaagagttggagttagaagctaatgcattgatatcgagaggagggaaggtctttgttgcatcagtaccatatgaagaagcatgtaagctgtgtggtgaatgtcttcccgattacattccaaaggacagcactcctcgtattgtgaagatggggaccaatccgggctgcccgtgtggtggtactcatgtttctgatgtttcagagatcatcagtgttacagtttctcaaatacggaccaagaaaggattcacgaaggtcttttacaatgttggtgtgaatatggccttattggcggcttgccgctcaagtcactgcaaacttgctatgcatcagagagttttctacaggtacccccccttctcctcgagccgacagtcaaactccaggtcaatgctagaaggaaacttcttgattgttcccggacagctcccgctccagtccgcattcattggtgagtcaaactcctctacggaatttttcgtcgccaacaagtggcgccgtctgtgggaattgaacccacgaccacacggtaggtcagttgttttgattcgtaggagccggagctggttccttgagtatgacagttaccttaatgcttcgggtaggatggcgagcctcaccctcgccggcggcctgggtgggatgatggaccataccctcggtgcaagcggtgggggtgggatgacgtgcctcacccatcgccgcaggcaggggtgggatgatggaccacaccttcgctgcaggcaaggatgggatggtatgatggattttaaacttgcaggatctaaaggttatgcaattggtactacatctaacccccacagggaatgggggaaatcccatccccgaaagatgttaagaagcagtgcgtggagggcagaccttccaatacggtttgatgccaagggccgccaacgaggcaccgatgtcgaggatattataaagggcgcctacaccgacgtcaaggcaccctcgtcgaagtggacacgacgtcgaggcaccctcgttgaagttggagccctcgacgaactagatgcctacgccgacattaaggttggctccctgatcgaagtggacgtcgacgtcaaggttcgcactaagggtattgaggaaaacgtcaccaatgtcaaggataatatcaaggctattaaggaaaaacgtcgccgacgtcaaggatggccgcagacattgagggggacgtcatcacatttacgccgacggcgacgtcgtggtcgtcgcgaagggacatcacgacgatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0031406 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA-synt_2c tRNA_SAD

Protein Analysis

1038

Amino Acids

115.82

Weight (kDa)

9.25

Isoelectric Point (pI)

55.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018832)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g13970
pyrus_communis	pycom15g01340
rosa_chinensis	RchiOBHm_Chr7g0210031
rosa_laevigata	RLG00000018273
rosa_multiflora	Rmu_sc0003581.1_g000002 Rmu_sc0004168.1_g000055 Rmu_sc0009286.1_g000007
rosa_samantha	Rh2DG270300 Rh2DG288600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1784, 2798
AarI	CACCTGC	1 cut(s)	134
AasI	GACNNNNNNGTC	3 cut(s)	2939, 3081, 3087
AatII	GACGTC	9 cut(s)	247, 273, 2820, 2851, 2937, 2943, 3028, 3059, 3085
Acc36I	ACCTGC	3 cut(s)	93, 126, 134
Acc65I	GGTACC	1 cut(s)	2205
AccB1I	GGYRCC	8 cut(s)	697, 734, 2205, 2352, 2777, 2804, 2824, 2855
AccB7I	CCANNNNNTGG	1 cut(s)	2349
AccBSI	CCGCTC	2 cut(s)	2160, 2290
AccI	GTMKAC	4 cut(s)	241, 520, 961, 2937
AccII	CGCG	2 cut(s)	218, 3096
AccIII	TCCGGA	1 cut(s)	598
AclWI	GGATC	2 cut(s)	581, 2647
AcoI	YGGCCR	1 cut(s)	3035
AcsI	RAATTY	2 cut(s)	966, 2330
AcuI	CTGAAG	1 cut(s)	706
AfaI	GTAC	8 cut(s)	608, 1362, 1477, 1791, 1923, 2038, 2207, 2662
AfiI	CCNNNNNNNGG	8 cut(s)	40, 616, 1472, 2033, 2349, 2362, 2566, 2680
AflIII	ACRYGT	1 cut(s)	603
AgsI	TTSAA	4 cut(s)	926, 1771, 2371, 2867
AhdI	GACNNNNNGTC	1 cut(s)	2847
AhlI	ACTAGT	1 cut(s)	710
AjiI	CACGTC	2 cut(s)	162, 2544
AjnI	CCWGG	6 cut(s)	472, 1213, 1693, 1799, 2240, 2490
AjuI	GAANNNNNNNTTGG	8 cut(s)	440, 472, 1181, 1213, 1661, 1693, 2087, 2119
AlwI	GGATC	2 cut(s)	581, 2647
AlwNI	CAGNNNCTG	2 cut(s)	10, 66
Ama87I	CYCGRG	1 cut(s)	2221
Aor13HI	TCCGGA	1 cut(s)	598
AoxI	GGCC	8 cut(s)	31, 42, 1241, 1802, 2139, 2488, 2764, 3035
ApoI	RAATTY	2 cut(s)	966, 2330
ArsI	GACNNNNNNTTYG	8 cut(s)	260, 292, 2228, 2260, 2574, 2606, 2919, 2951
Asp700I	GAANNNNTTC	3 cut(s)	1398, 1959, 2102
Asp718I	GGTACC	1 cut(s)	2205
AspLEI	GCGC	7 cut(s)	393, 700, 908, 1134, 1614, 2355, 2807
AspS9I	GGNCC	9 cut(s)	31, 828, 1241, 1449, 2010, 2091, 2506, 2582, 2764
AsuC2I	CCSGG	3 cut(s)	1458, 2019, 2277
AvaI	CYCGRG	1 cut(s)	2221
AvaII	GGWCC	6 cut(s)	828, 1449, 2010, 2091, 2506, 2582
BaeI	ACNNNNGTAYC	4 cut(s)	1467, 1500, 2028, 2061
BanI	GGYRCC	8 cut(s)	697, 734, 2205, 2352, 2777, 2804, 2824, 2855
BanII	GRGCYC	1 cut(s)	2878
BarI	GAAGNNNNNNTAC	4 cut(s)	2102, 2134, 2198, 2230
BbsI	GAAGAC	2 cut(s)	1391, 1952
BbvI	GCAGC	9 cut(s)	83, 139, 219, 247, 883, 886, 1448, 2009, 2582
BceAI	ACGGC	5 cut(s)	300, 711, 857, 2340, 3092
BciT130I	CCWGG	6 cut(s)	474, 1215, 1695, 1801, 2242, 2492
BciVI	GTATCC	1 cut(s)	1727
BcnI	CCSGG	3 cut(s)	1458, 2019, 2277
BcuI	ACTAGT	1 cut(s)	710
BfmI	CTRYAG	6 cut(s)	133, 177, 233, 582, 2200, 2596
BfoI	RGCGCY	4 cut(s)	701, 909, 2356, 2808
BfuAI	ACCTGC	3 cut(s)	93, 126, 134
BfuI	GTATCC	1 cut(s)	1727
BglI	GCCNNNNNGGC	2 cut(s)	2147, 2775
Bme1390I	CCNGG	9 cut(s)	474, 1215, 1458, 1695, 1801, 2019, 2242, 2277, 2492
Bme18I	GGWCC	6 cut(s)	828, 1449, 2010, 2091, 2506, 2582
BmeRI	GACNNNNNGTC	1 cut(s)	2847
BmeT110I	CYCGRG	1 cut(s)	2221
BmgBI	CACGTC	2 cut(s)	162, 2544
BmgT120I	GGNCC	9 cut(s)	31, 828, 1241, 1449, 2010, 2091, 2506, 2582, 2764
BmrFI	CCNGG	9 cut(s)	474, 1215, 1458, 1695, 1801, 2019, 2242, 2277, 2492
BmsI	GCATC	6 cut(s)	60, 1364, 1925, 2194, 2746, 2881
BpiI	GAAGAC	2 cut(s)	1391, 1952
BplI	GAGNNNNNCTC	6 cut(s)	1007, 1039, 2303, 2335, 2844, 2876
BpmI	CTGGAG	2 cut(s)	2224, 2276
Bpu10I	CCTNAGC	1 cut(s)	223
BpuEI	CTTGAG	5 cut(s)	480, 1221, 1701, 2146, 2450
BpuMI	CCSGG	3 cut(s)	1458, 2019, 2277
Bsa29I	ATCGAT	1 cut(s)	848
BsaJI	CCNNGG	3 cut(s)	2491, 2515, 2760
BsaWI	WCCGGW	2 cut(s)	598, 790
BsaXI	ACNNNNNCTCC	4 cut(s)	1329, 1359, 1890, 1920
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 616, 1472, 2033, 2349, 2362, 2566, 2680
Bse118I	RCCGGY	2 cut(s)	908, 2483
Bse1I	ACTGG	1 cut(s)	2293
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	6 cut(s)	474, 1215, 1695, 1801, 2242, 2492
BseCI	ATCGAT	1 cut(s)	848
BseDI	CCNNGG	3 cut(s)	2491, 2515, 2760
BseLI	CCNNNNNNNGG	8 cut(s)	40, 616, 1472, 2033, 2349, 2362, 2566, 2680
BseMII	CTCAG	3 cut(s)	429, 1170, 1650
BseNI	ACTGG	1 cut(s)	2293
BseRI	GAGGAG	8 cut(s)	102, 1022, 1350, 1419, 1911, 1980, 2209, 2311
BseXI	GCAGC	9 cut(s)	83, 139, 219, 247, 883, 886, 1448, 2009, 2582
BseYI	CCCAGC	4 cut(s)	228, 419, 1160, 1640
Bsh1236I	CGCG	2 cut(s)	218, 3096
Bsh1285I	CGRYCG	2 cut(s)	78, 848
BshFI	GGCC	8 cut(s)	33, 44, 1243, 1804, 2141, 2490, 2766, 3037
BshNI	GGYRCC	8 cut(s)	697, 734, 2205, 2352, 2777, 2804, 2824, 2855
BshVI	ATCGAT	1 cut(s)	848
BsiEI	CGRYCG	2 cut(s)	78, 848
BsiHKCI	CYCGRG	1 cut(s)	2221
BslFI	GGGAC	3 cut(s)	1462, 2023, 3067
BslI	CCNNNNNNNGG	8 cut(s)	40, 616, 1472, 2033, 2349, 2362, 2566, 2680
BsmFI	GGGAC	3 cut(s)	1462, 2023, 3067
BsmI	GAATGC	2 cut(s)	890, 2300
BsnI	GGCC	8 cut(s)	33, 44, 1243, 1804, 2141, 2490, 2766, 3037
BsoBI	CYCGRG	1 cut(s)	2221
Bsp1286I	GDGCHC	1 cut(s)	2878
Bsp13I	TCCGGA	1 cut(s)	598
Bsp143I	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
Bsp68I	TCGCGA	1 cut(s)	3096
BspANI	GGCC	8 cut(s)	33, 44, 1243, 1804, 2141, 2490, 2766, 3037
BspCNI	CTCAG	3 cut(s)	428, 1169, 1649
BspDI	ATCGAT	1 cut(s)	848
BspEI	TCCGGA	1 cut(s)	598
BspFNI	CGCG	2 cut(s)	218, 3096
BspMAI	CTGCAG	4 cut(s)	137, 181, 237, 2600
BspMI	ACCTGC	3 cut(s)	93, 126, 134
BspPI	GGATC	2 cut(s)	581, 2647
BspT107I	GGYRCC	8 cut(s)	697, 734, 2205, 2352, 2777, 2804, 2824, 2855
BsrBI	CCGCTC	2 cut(s)	2160, 2290
BsrFI	RCCGGY	2 cut(s)	908, 2483
BsrI	ACTGG	1 cut(s)	2293
BssAI	RCCGGY	2 cut(s)	908, 2483
BssECI	CCNNGG	3 cut(s)	2491, 2515, 2760
BssMI	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
BssNAI	GTATAC	1 cut(s)	962
BssT1I	CCWWGG	1 cut(s)	2760
Bst1107I	GTATAC	1 cut(s)	962
Bst2UI	CCWGG	6 cut(s)	474, 1215, 1695, 1801, 2242, 2492
BstAPI	GCANNNNNTGC	1 cut(s)	10
BstDEI	CTNAG	5 cut(s)	223, 415, 1156, 1636, 2955
BstFNI	CGCG	2 cut(s)	218, 3096
BstH2I	RGCGCY	4 cut(s)	701, 909, 2356, 2808
BstHHI	GCGC	7 cut(s)	393, 700, 908, 1134, 1614, 2355, 2807
BstKTI	GATC	8 cut(s)	78, 589, 818, 848, 1503, 2064, 2642, 2925
BstMBI	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
BstMCI	CGRYCG	2 cut(s)	78, 848
BstNI	CCWGG	6 cut(s)	474, 1215, 1695, 1801, 2242, 2492
BstNSI	RCATGY	7 cut(s)	377, 607, 629, 1118, 1380, 1598, 1941
BstSCI	CCNGG	9 cut(s)	472, 1213, 1456, 1693, 1799, 2017, 2240, 2275, 2490
BstSFI	CTRYAG	6 cut(s)	133, 177, 233, 582, 2200, 2596
BstUI	CGCG	2 cut(s)	218, 3096
BstV1I	GCAGC	9 cut(s)	83, 139, 219, 247, 883, 886, 1448, 2009, 2582
BstV2I	GAAGAC	2 cut(s)	1391, 1952
BstX2I	RGATCY	2 cut(s)	586, 2639
BstYI	RGATCY	2 cut(s)	586, 2639
BstZ17I	GTATAC	1 cut(s)	962
Bsu15I	ATCGAT	1 cut(s)	848
BsuI	GTATCC	1 cut(s)	1727
BsuRI	GGCC	8 cut(s)	33, 44, 1243, 1804, 2141, 2490, 2766, 3037
BsuTUI	ATCGAT	1 cut(s)	848
BtgZI	GCGATG	1 cut(s)	2540
BtrI	CACGTC	2 cut(s)	162, 2544
BtsI	GCAGTG	2 cut(s)	2167, 2728
BtsIMutI	CAGTG	4 cut(s)	1513, 2074, 2167, 2728
BtuMI	TCGCGA	1 cut(s)	3096
BveI	ACCTGC	3 cut(s)	93, 126, 134
CaiI	CAGNNNCTG	2 cut(s)	10, 66
CfoI	GCGC	7 cut(s)	393, 700, 908, 1134, 1614, 2355, 2807
Cfr10I	RCCGGY	2 cut(s)	908, 2483
Cfr13I	GGNCC	9 cut(s)	31, 828, 1241, 1449, 2010, 2091, 2506, 2582, 2764
ClaI	ATCGAT	1 cut(s)	848
CseI	GACGC	3 cut(s)	207, 227, 993
Csp6I	GTAC	8 cut(s)	607, 1361, 1476, 1790, 1922, 2037, 2206, 2661
CviQI	GTAC	8 cut(s)	607, 1361, 1476, 1790, 1922, 2037, 2206, 2661
DdeI	CTNAG	5 cut(s)	223, 415, 1156, 1636, 2955
DinI	GGCGCC	3 cut(s)	699, 2354, 2806
DpnI	GATC	8 cut(s)	77, 588, 817, 847, 1502, 2063, 2641, 2924
DpnII	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
DraI	TTTAAA	4 cut(s)	468, 1209, 1689, 2629
DrdI	GACNNNNNNGTC	3 cut(s)	2939, 3081, 3087
DriI	GACNNNNNGTC	1 cut(s)	2847
DseDI	GACNNNNNNGTC	3 cut(s)	2939, 3081, 3087
EaeI	YGGCCR	1 cut(s)	3035
Eam1105I	GACNNNNNGTC	1 cut(s)	2847
EciI	GGCGGA	1 cut(s)	886
Eco130I	CCWWGG	1 cut(s)	2760
Eco24I	GRGCYC	1 cut(s)	2878
Eco32I	GATATC	2 cut(s)	1329, 1890
Eco47I	GGWCC	6 cut(s)	828, 1449, 2010, 2091, 2506, 2582
Eco57I	CTGAAG	1 cut(s)	706
Eco88I	CYCGRG	1 cut(s)	2221
EcoRII	CCWGG	6 cut(s)	472, 1213, 1693, 1799, 2240, 2490
EcoRV	GATATC	2 cut(s)	1329, 1890
EcoT14I	CCWWGG	1 cut(s)	2760
EcoT22I	ATGCAT	3 cut(s)	1324, 1885, 2187
EcoT38I	GRGCYC	1 cut(s)	2878
EgeI	GGCGCC	3 cut(s)	699, 2354, 2806
EheI	GGCGCC	3 cut(s)	699, 2354, 2806
ErhI	CCWWGG	1 cut(s)	2760
FaqI	GGGAC	3 cut(s)	1462, 2023, 3067
FauI	CCCGC	2 cut(s)	212, 2295
FauNDI	CATATG	4 cut(s)	1246, 1366, 1807, 1927
FblI	GTMKAC	4 cut(s)	241, 520, 961, 2937
FriOI	GRGCYC	1 cut(s)	2878
GlaI	GCGC	7 cut(s)	392, 699, 907, 1133, 1613, 2354, 2806
GsaI	CCCAGC	4 cut(s)	232, 423, 1164, 1644
GsuI	CTGGAG	2 cut(s)	2224, 2276
HaeII	RGCGCY	4 cut(s)	701, 909, 2356, 2808
HaeIII	GGCC	8 cut(s)	33, 44, 1243, 1804, 2141, 2490, 2766, 3037
HgaI	GACGC	3 cut(s)	207, 227, 993
HhaI	GCGC	7 cut(s)	393, 700, 908, 1134, 1614, 2355, 2807
Hin6I	GCGC	7 cut(s)	391, 698, 906, 1132, 1612, 2353, 2805
HinP1I	GCGC	7 cut(s)	391, 698, 906, 1132, 1612, 2353, 2805
HincII	GTYRAC	2 cut(s)	242, 2938
HindII	GTYRAC	2 cut(s)	242, 2938
HindIII	AAGCTT	3 cut(s)	395, 1136, 1616
Hpy166II	GTNNAC	9 cut(s)	242, 298, 521, 962, 1039, 1519, 2841, 2932, 2938
Hpy188I	TCNGA	8 cut(s)	86, 950, 997, 1489, 1498, 2050, 2059, 2190
Hpy8I	GTNNAC	9 cut(s)	242, 298, 521, 962, 1039, 1519, 2841, 2932, 2938
HpyF3I	CTNAG	5 cut(s)	223, 415, 1156, 1636, 2955
HspAI	GCGC	7 cut(s)	391, 698, 906, 1132, 1612, 2353, 2805
KasI	GGCGCC	3 cut(s)	697, 2352, 2804
Kpn2I	TCCGGA	1 cut(s)	598
KpnI	GGTACC	1 cut(s)	2209
KroI	GCCGGC	1 cut(s)	2483
KroNI	GCCGGC	1 cut(s)	2485
Kzo9I	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
Lsp1109I	GCAGC	9 cut(s)	83, 139, 219, 247, 883, 886, 1448, 2009, 2582
LweI	GCATC	6 cut(s)	60, 1364, 1925, 2194, 2746, 2881
MaeIII	GTNAC	6 cut(s)	793, 1510, 2071, 2165, 2441, 2974
MalI	GATC	8 cut(s)	77, 588, 817, 847, 1502, 2063, 2641, 2924
MbiI	CCGCTC	2 cut(s)	2160, 2290
MboI	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
MfeI	CAATTG	1 cut(s)	2655
MflI	RGATCY	2 cut(s)	586, 2639
MhlI	GDGCHC	1 cut(s)	2878
Mly113I	GGCGCC	3 cut(s)	698, 2353, 2805
MlyI	GAGTC	7 cut(s)	392, 674, 960, 986, 1133, 1613, 2321
MmeI	TCCRAC	7 cut(s)	64, 686, 843, 1284, 1711, 1845, 2851
Mph1103I	ATGCAT	3 cut(s)	1324, 1885, 2187
MreI	CGCCGGCG	1 cut(s)	2483
MroI	TCCGGA	1 cut(s)	598
MroNI	GCCGGC	1 cut(s)	2483
MroXI	GAANNNNTTC	3 cut(s)	1398, 1959, 2102
MslI	CAYNNNNRTG	5 cut(s)	378, 546, 1119, 1599, 3112
MspA1I	CMGCKG	4 cut(s)	232, 419, 1160, 1640
MspR9I	CCNGG	9 cut(s)	474, 1215, 1458, 1695, 1801, 2019, 2242, 2277, 2492
MunI	CAATTG	1 cut(s)	2655
Mva1269I	GAATGC	2 cut(s)	890, 2300
MvaI	CCWGG	6 cut(s)	474, 1215, 1695, 1801, 2242, 2492
MvnI	CGCG	2 cut(s)	218, 3096
NaeI	GCCGGC	1 cut(s)	2485
NarI	GGCGCC	3 cut(s)	698, 2353, 2805
NciI	CCSGG	3 cut(s)	1458, 2019, 2277
NdeI	CATATG	4 cut(s)	1246, 1366, 1807, 1927
NdeII	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
NgoMIV	GCCGGC	1 cut(s)	2483
NmeAIII	GCCGAG	6 cut(s)	367, 726, 790, 1004, 1108, 1588
NmuCI	GTSAC	2 cut(s)	2165, 2974
NruI	TCGCGA	1 cut(s)	3096
NsiI	ATGCAT	3 cut(s)	1324, 1885, 2187
NspI	RCATGY	7 cut(s)	377, 607, 629, 1118, 1380, 1598, 1941
PaeR7I	CTCGAG	1 cut(s)	2221
PaqCI	CACCTGC	1 cut(s)	134
PciI	ACATGT	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	7 cut(s)	170, 841, 2931, 3022, 3076, 3082, 3088
PctI	GAATGC	2 cut(s)	890, 2300
PdiI	GCCGGC	1 cut(s)	2485
PdmI	GAANNNNTTC	3 cut(s)	1398, 1959, 2102
PfeI	GAWTC	8 cut(s)	26, 781, 850, 998, 1018, 1771, 2103, 2404
PflMI	CCANNNNNTGG	1 cut(s)	2349
PfoI	TCCNGGA	1 cut(s)	2275
Ple19I	CGATCG	2 cut(s)	78, 848
PleI	GAGTC	7 cut(s)	391, 673, 959, 986, 1132, 1612, 2320
PluTI	GGCGCC	3 cut(s)	701, 2356, 2808
PpsI	GAGTC	7 cut(s)	391, 673, 959, 986, 1132, 1612, 2320
PscI	ACATGT	1 cut(s)	603
PsiI	TTATAA	2 cut(s)	1784, 2798
Psp6I	CCWGG	6 cut(s)	472, 1213, 1693, 1799, 2240, 2490
PspFI	CCCAGC	4 cut(s)	228, 419, 1160, 1640
PspGI	CCWGG	6 cut(s)	472, 1213, 1693, 1799, 2240, 2490
PspPI	GGNCC	9 cut(s)	31, 828, 1241, 1449, 2010, 2091, 2506, 2582, 2764
PspXI	VCTCGAGB	1 cut(s)	2221
PstI	CTGCAG	4 cut(s)	137, 181, 237, 2600
PstNI	CAGNNNCTG	2 cut(s)	10, 66
PsuI	RGATCY	2 cut(s)	586, 2639
PvuI	CGATCG	2 cut(s)	78, 848
PvuII	CAGCTG	4 cut(s)	232, 419, 1160, 1640
RruI	TCGCGA	1 cut(s)	3096
RsaI	GTAC	8 cut(s)	608, 1362, 1477, 1791, 1923, 2038, 2207, 2662
RsaNI	GTAC	8 cut(s)	607, 1361, 1476, 1790, 1922, 2037, 2206, 2661
RseI	CAYNNNNRTG	5 cut(s)	378, 546, 1119, 1599, 3112
SalI	GTCGAC	2 cut(s)	240, 2936
Sau3AI	GATC	8 cut(s)	75, 586, 815, 845, 1500, 2061, 2639, 2922
Sau96I	GGNCC	9 cut(s)	31, 828, 1241, 1449, 2010, 2091, 2506, 2582, 2764
SchI	GAGTC	7 cut(s)	392, 674, 960, 986, 1133, 1613, 2321
ScrFI	CCNGG	9 cut(s)	474, 1215, 1458, 1695, 1801, 2019, 2242, 2277, 2492
SduI	GDGCHC	1 cut(s)	2878
SfaNI	GCATC	6 cut(s)	60, 1364, 1925, 2194, 2746, 2881
SfcI	CTRYAG	6 cut(s)	133, 177, 233, 582, 2200, 2596
SfoI	GGCGCC	3 cut(s)	699, 2354, 2806
Sfr274I	CTCGAG	1 cut(s)	2221
SgrAI	CRCCGGYG	2 cut(s)	908, 2483
SgrDI	CGTCGACG	2 cut(s)	240, 2936
SinI	GGWCC	6 cut(s)	828, 1449, 2010, 2091, 2506, 2582
SlaI	CTCGAG	1 cut(s)	2221
SmiMI	CAYNNNNRTG	5 cut(s)	378, 546, 1119, 1599, 3112
SmlI	CTYRAG	6 cut(s)	495, 1236, 1716, 2161, 2221, 2429
SmoI	CTYRAG	6 cut(s)	495, 1236, 1716, 2161, 2221, 2429
SpeI	ACTAGT	1 cut(s)	710
SspDI	GGCGCC	3 cut(s)	697, 2352, 2804
StyD4I	CCNGG	9 cut(s)	472, 1213, 1456, 1693, 1799, 2017, 2240, 2275, 2490
StyI	CCWWGG	1 cut(s)	2760
TaqII	GACCGA	1 cut(s)	198
TauI	GCSGC	7 cut(s)	902, 2153, 2160, 2490, 2562, 2769, 3040
TfiI	GAWTC	8 cut(s)	26, 781, 850, 998, 1018, 1771, 2103, 2404
TscAI	CASTG	4 cut(s)	1513, 2074, 2174, 2728
TseFI	GTSAC	2 cut(s)	2165, 2974
Tsp45I	GTSAC	2 cut(s)	2165, 2974
TspDTI	ATGAA	8 cut(s)	458, 503, 934, 1199, 1383, 1679, 1944, 2293
TspGWI	ACGGA	6 cut(s)	34, 53, 158, 202, 2104, 2342
TspRI	CASTG	4 cut(s)	1513, 2074, 2174, 2728
Van91I	CCANNNNNTGG	1 cut(s)	2349
VpaK11BI	GGWCC	6 cut(s)	828, 1449, 2010, 2091, 2506, 2582
XapI	RAATTY	2 cut(s)	966, 2330
XceI	RCATGY	7 cut(s)	377, 607, 629, 1118, 1380, 1598, 1941
XcmI	CCANNNNNNNNNTGG	3 cut(s)	63, 676, 1807
XhoI	CTCGAG	1 cut(s)	2221
XmiI	GTMKAC	4 cut(s)	241, 520, 961, 2937
XmnI	GAANNNNTTC	3 cut(s)	1398, 1959, 2102
ZraI	GACGTC	9 cut(s)	245, 271, 2818, 2849, 2935, 2941, 3026, 3057, 3083
Zsp2I	ATGCAT	3 cut(s)	1324, 1885, 2187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.