Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009627.1

Orthogroup ID

OG0012431

Physical Location & Seq

Genomic Coordinates Forward (+)

15623 .. 17705

Gene Structure 2083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009627.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

atggagctctactctgcccaccaccaccatctccttcgtcatcaggacccaatacccagattactcctccgcacattccacagcactctgcctcctcagagatgtcaccggcggattcggcggcggtgtctctcaacaacgacggcggccctgatggaacagacgggagggaaaatggtggtggagctggttggagctttcaacgagctcacagaaaggatgggcatgctctccagcagcgggtcccacttactcttcaaagctctcaagctctcgattcccttactccgtgccttgcctgtaaccccggacggtcgttcttcactctccaaggccttgtcttgtgccttaatactcgcagaccttcagatggatgcggaggtgatttcagctgggatgctcagaccagttctggaggctggagcgatttcgatactcgaggttcgaaaccagattggtaccggcactgctcatttgttacacgagagcttgcgtgtgatgaaaatcccaactaaagttgatgtcttggatgatgatagtgctgctgcgttgagaaaattctgcttgacatattatgatatgagggctgtgattttggacttggttctcaggcttgatgtaatgaggcacctcgattatcttccgaggtatcagcagcagttggtagctctggaggtgatgaagattcatgcacctttagctcatgctgttggggctaattggttgtcattggagcttgaggatttgtcatttcagtacttgtttccgaattcgtatttgtatgtggatacatggttgaggagtcatgagactggaagtaggcctttggtggatgtgtacaaggagcagcttttgcattcgttgaaagaggatcccttgttggcggggctggttgtggatgtgtcagtgaatgggagatataagagtcggtatagcaccatgaagaagctgttgaaggatggtaggaagccggaacaggtaaatgacgtgctggggttgcgagtcatattggagccgaggtctggagaagatgaggcagaaatgggggaaagagcatgttataggactcgtcaagttgttcagtcattgtggaaagagatgcctcacaggacaaaggattacattgctaggcctaaggcgaatgggtataggagtttgcatatggcagttgatgtgagtgacggtggcaagagtagacctttaatggaaatacaaattaggactcaggagatggatatgttggcagatgctgggacagcatcccactctttgtacaagagtggtcttacagaccctgaagaggcaaagcggctcaaggccataatgatggctgcggctgaacttgcagcatttcgccttaaagatcttccatcggccaatcatgaaggcatagagactgagcaaagtaagagtgatagagtgttccgccttcttgacaagaatggtgatggaagaatcaatattgaggaacttaaggaagtgatggaagagctcggtgctccaggggaagatgcatgcgagatgatgcaactccttgatgctaatagcgatggttctcttagctcagatgaattcgatttgtttcagaaacaggtcgagtttatgcgtaattttgacgacagagatgagcagtacaaaactgaattgaatgagaaacttcagattgcagaaaacaacagcttgatccaggtatatgctgaagatcttggcggcagcattgcaaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008728 GO:0009507 GO:0009536 GO:0016740 GO:0016772 GO:0016778 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 HD_4 RelA_SpoT

Protein Analysis

575

Amino Acids

64.89

Weight (kDa)

5.92

Isoelectric Point (pI)

40.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17470 AT3G17470 AT3G17470
fragaria_vesca	FvH4_4g21520 FvH4_4g21520 FvH4_4g21520
malus_domestica	MD13G1139600.v1.1
prunus_persica	Prupe.1G105100_v2.0.a1
pyrus_communis	pycom13g12150
rosa_chinensis	RchiOBHm_Chr4g0427541
rosa_laevigata	RLG00000007228
rosa_multiflora	Rmu_sc0009627.1_g000004
rosa_roxburghii	Rroxscaffold_5G00369190
rosa_rugosa	Rorug04G0218400
rosa_samantha	Rh4AG275000 Rh4BG280800 Rh4CG296100 Rh4DG278200
rosa_wichuraiana	Rw4G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	458
AccB1I	GGYRCC	2 cut(s)	458, 627
AccI	GTMKAC	1 cut(s)	1195
AclWI	GGATC	3 cut(s)	866, 879, 1678
AcoI	YGGCCR	1 cut(s)	1374
AcsI	RAATTY	3 cut(s)	557, 769, 1571
AcuI	CTGAAG	4 cut(s)	350, 1317, 1643, 1719
AfaI	GTAC	5 cut(s)	460, 758, 839, 1274, 1634
AfiI	CCNNNNNNNGG	4 cut(s)	240, 370, 1022, 1300
AflII	CTTAAG	1 cut(s)	1472
AgsI	TTSAA	5 cut(s)	202, 259, 865, 955, 1648
AjiI	CACGTC	1 cut(s)	988
AjnI	CCWGG	2 cut(s)	1501, 1686
Alw21I	GWGCWC	4 cut(s)	9, 210, 1494, 1501
Alw26I	GTCTC	3 cut(s)	134, 803, 1388
AlwI	GGATC	3 cut(s)	866, 879, 1678
AlwNI	CAGNNNCTG	2 cut(s)	1250, 1295
Ama87I	CYCGRG	1 cut(s)	437
AoxI	GGCC	6 cut(s)	147, 333, 821, 1130, 1317, 1374
ApeKI	GCWGC	8 cut(s)	237, 542, 545, 655, 847, 1331, 1346, 1713
ApoI	RAATTY	3 cut(s)	557, 769, 1571
Asp718I	GGTACC	1 cut(s)	458
AspS9I	GGNCC	3 cut(s)	46, 148, 243
AsuC2I	CCSGG	1 cut(s)	308
AsuHPI	GGTGA	4 cut(s)	98, 394, 688, 1457
AsuII	TTCGAA	1 cut(s)	445
AvaI	CYCGRG	1 cut(s)	437
AvaII	GGWCC	2 cut(s)	46, 243
AxyI	CCTNAGG	1 cut(s)	1134
BamHI	GGATCC	1 cut(s)	871
BanI	GGYRCC	2 cut(s)	458, 627
BanII	GRGCYC	3 cut(s)	9, 210, 1494
BauI	CACGAG	1 cut(s)	482
Bbv12I	GWGCWC	4 cut(s)	9, 210, 1494, 1501
BbvI	GCAGC	7 cut(s)	249, 529, 532, 667, 859, 1318, 1358
BceAI	ACGGC	1 cut(s)	159
BciT130I	CCWGG	2 cut(s)	1503, 1688
BciVI	GTATCC	1 cut(s)	781
BcnI	CCSGG	1 cut(s)	308
BcoDI	GTCTC	3 cut(s)	134, 803, 1388
BfaI	CTAG	2 cut(s)	1128, 1726
BfrI	CTTAAG	1 cut(s)	1472
BfuI	GTATCC	1 cut(s)	781
BglII	AGATCT	2 cut(s)	1363, 1702
BmcAI	AGTACT	1 cut(s)	758
Bme1390I	CCNGG	3 cut(s)	308, 1503, 1688
Bme18I	GGWCC	2 cut(s)	46, 243
BmeT110I	CYCGRG	1 cut(s)	437
BmgBI	CACGTC	1 cut(s)	988
BmgT120I	GGNCC	3 cut(s)	46, 148, 243
BmiI	GGNNCC	7 cut(s)	48, 244, 245, 460, 629, 873, 1014
BmrFI	CCNGG	3 cut(s)	308, 1503, 1688
BmsI	GCATC	8 cut(s)	364, 387, 1089, 1237, 1268, 1501, 1515, 1528
BplI	GAGNNNNNCTC	1 cut(s)	28
BpmI	CTGGAG	6 cut(s)	217, 434, 441, 692, 1044, 1485
Bpu14I	TTCGAA	1 cut(s)	445
BpuEI	CTTGAG	3 cut(s)	251, 758, 1298
BpuMI	CCSGG	1 cut(s)	308
BsaBI	GATNNNNATC	1 cut(s)	503
BsaJI	CCNNGG	5 cut(s)	306, 330, 644, 1016, 1502
BsaXI	ACNNNNNCTCC	4 cut(s)	76, 106, 1004, 1034
Bsc4I	CCNNNNNNNGG	4 cut(s)	240, 370, 1022, 1300
Bse118I	RCCGGY	2 cut(s)	108, 461
Bse1I	ACTGG	2 cut(s)	407, 817
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	2 cut(s)	1122, 1716
Bse8I	GATNNNNATC	1 cut(s)	503
BseBI	CCWGG	2 cut(s)	1503, 1688
BseDI	CCNNGG	5 cut(s)	306, 330, 644, 1016, 1502
BseGI	GGATG	8 cut(s)	225, 379, 402, 535, 838, 904, 964, 1259
BseJI	GATNNNNATC	1 cut(s)	503
BseLI	CCNNNNNNNGG	4 cut(s)	240, 370, 1022, 1300
BseMI	GCAATG	2 cut(s)	1122, 1716
BseMII	CTCAG	6 cut(s)	110, 415, 622, 1238, 1389, 1578
BseNI	ACTGG	2 cut(s)	407, 817
BseRI	GAGGAG	3 cut(s)	56, 84, 814
BseXI	GCAGC	7 cut(s)	249, 529, 532, 667, 859, 1318, 1358
BseYI	CCCAGC	3 cut(s)	392, 991, 1250
Bsh1285I	CGRYCG	1 cut(s)	316
BshFI	GGCC	6 cut(s)	149, 335, 823, 1132, 1319, 1376
BshNI	GGYRCC	2 cut(s)	458, 627
BsiEI	CGRYCG	1 cut(s)	316
BsiHKAI	GWGCWC	4 cut(s)	9, 210, 1494, 1501
BsiHKCI	CYCGRG	1 cut(s)	437
BsiSI	CCGG	4 cut(s)	109, 308, 462, 971
BslFI	GGGAC	2 cut(s)	229, 1267
BslI	CCNNNNNNNGG	4 cut(s)	240, 370, 1022, 1300
BsmAI	GTCTC	3 cut(s)	134, 803, 1388
BsmFI	GGGAC	2 cut(s)	229, 1267
BsmI	GAATGC	1 cut(s)	856
BsnI	GGCC	6 cut(s)	149, 335, 823, 1132, 1319, 1376
BsoBI	CYCGRG	1 cut(s)	437
Bsp119I	TTCGAA	1 cut(s)	445
Bsp1286I	GDGCHC	4 cut(s)	9, 210, 1494, 1501
Bsp1407I	TGTACA	2 cut(s)	837, 1272
Bsp143I	GATC	4 cut(s)	871, 1363, 1683, 1702
BspANI	GGCC	6 cut(s)	149, 335, 823, 1132, 1319, 1376
BspCNI	CTCAG	6 cut(s)	109, 414, 621, 1237, 1390, 1577
BspHI	TCATGA	2 cut(s)	805, 1381
BspLI	GGNNCC	7 cut(s)	48, 244, 245, 460, 629, 873, 1014
BspPI	GGATC	3 cut(s)	866, 879, 1678
BspQI	GCTCTTC	1 cut(s)	1482
BspT104I	TTCGAA	1 cut(s)	445
BspT107I	GGYRCC	2 cut(s)	458, 627
BspTI	CTTAAG	1 cut(s)	1472
BsrDI	GCAATG	2 cut(s)	1122, 1716
BsrFI	RCCGGY	2 cut(s)	108, 461
BsrGI	TGTACA	2 cut(s)	837, 1272
BsrI	ACTGG	2 cut(s)	407, 817
BssAI	RCCGGY	2 cut(s)	108, 461
BssECI	CCNNGG	5 cut(s)	306, 330, 644, 1016, 1502
BssMI	GATC	4 cut(s)	871, 1363, 1683, 1702
BssSI	CACGAG	1 cut(s)	482
BssT1I	CCWWGG	1 cut(s)	330
Bst2BI	CACGAG	1 cut(s)	482
Bst2UI	CCWGG	2 cut(s)	1503, 1688
Bst4CI	ACNGT	2 cut(s)	314, 1184
Bst6I	CTCTTC	3 cut(s)	260, 1293, 1482
BstAFI	CTTAAG	1 cut(s)	1472
BstAPI	GCANNNNNTGC	1 cut(s)	853
BstAUI	TGTACA	2 cut(s)	837, 1272
BstBI	TTCGAA	1 cut(s)	445
BstC8I	GCNNGC	3 cut(s)	227, 491, 1516
BstDEI	CTNAG	8 cut(s)	96, 401, 608, 1134, 1224, 1398, 1559, 1564
BstF5I	GGATG	8 cut(s)	225, 379, 402, 535, 838, 904, 964, 1259
BstKTI	GATC	4 cut(s)	874, 1366, 1686, 1705
BstMAI	GTCTC	3 cut(s)	134, 803, 1388
BstMBI	GATC	4 cut(s)	871, 1363, 1683, 1702
BstMCI	CGRYCG	1 cut(s)	316
BstMWI	GCNNNNNNNGC	7 cut(s)	118, 698, 713, 853, 997, 1256, 1343
BstNI	CCWGG	2 cut(s)	1503, 1688
BstNSI	RCATGY	3 cut(s)	229, 1059, 1518
BstSCI	CCNGG	3 cut(s)	306, 1501, 1686
BstV1I	GCAGC	7 cut(s)	249, 529, 532, 667, 859, 1318, 1358
BstX2I	RGATCY	3 cut(s)	871, 1363, 1702
BstXI	CCANNNNNNTGG	1 cut(s)	1327
BstYI	RGATCY	3 cut(s)	871, 1363, 1702
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	781
BsuRI	GGCC	6 cut(s)	149, 335, 823, 1132, 1319, 1376
BtgZI	GCGATG	1 cut(s)	1563
BtrI	CACGTC	1 cut(s)	988
BtsCI	GGATG	8 cut(s)	225, 379, 402, 535, 838, 904, 964, 1259
BtsI	GCAGTG	1 cut(s)	465
BtsIMutI	CAGTG	2 cut(s)	465, 912
Cac8I	GCNNGC	3 cut(s)	227, 491, 1516
CaiI	CAGNNNCTG	2 cut(s)	1250, 1295
CciI	TCATGA	2 cut(s)	805, 1381
Cfr10I	RCCGGY	2 cut(s)	108, 461
Cfr13I	GGNCC	3 cut(s)	46, 148, 243
Csp6I	GTAC	5 cut(s)	459, 757, 838, 1273, 1633
CviAII	CATG	9 cut(s)	226, 689, 704, 792, 806, 940, 1056, 1382, 1515
CviQI	GTAC	5 cut(s)	459, 757, 838, 1273, 1633
DdeI	CTNAG	8 cut(s)	96, 401, 608, 1134, 1224, 1398, 1559, 1564
DpnI	GATC	4 cut(s)	873, 1365, 1685, 1704
DpnII	GATC	4 cut(s)	871, 1363, 1683, 1702
EaeI	YGGCCR	1 cut(s)	1374
Eam1104I	CTCTTC	3 cut(s)	260, 1293, 1482
EarI	CTCTTC	3 cut(s)	260, 1293, 1482
EciI	GGCGGA	2 cut(s)	127, 1415
Ecl136II	GAGCTC	3 cut(s)	7, 208, 1492
Eco130I	CCWWGG	1 cut(s)	330
Eco147I	AGGCCT	3 cut(s)	335, 823, 1132
Eco24I	GRGCYC	3 cut(s)	9, 210, 1494
Eco47I	GGWCC	2 cut(s)	46, 243
Eco53kI	GAGCTC	3 cut(s)	7, 208, 1492
Eco57I	CTGAAG	4 cut(s)	350, 1317, 1643, 1719
Eco81I	CCTNAGG	1 cut(s)	1134
Eco88I	CYCGRG	1 cut(s)	437
EcoICRI	GAGCTC	3 cut(s)	7, 208, 1492
EcoO109I	RGGNCCY	2 cut(s)	46, 243
EcoRI	GAATTC	2 cut(s)	769, 1571
EcoRII	CCWGG	2 cut(s)	1501, 1686
EcoT14I	CCWWGG	1 cut(s)	330
EcoT22I	ATGCAT	1 cut(s)	1516
EcoT38I	GRGCYC	3 cut(s)	9, 210, 1494
ErhI	CCWWGG	1 cut(s)	330
FaeI	CATG	9 cut(s)	229, 692, 707, 795, 809, 943, 1059, 1385, 1518
FalI	AAGNNNNNCTT	2 cut(s)	808, 840
FaqI	GGGAC	2 cut(s)	229, 1267
FatI	CATG	9 cut(s)	225, 688, 703, 791, 805, 939, 1055, 1381, 1514
FauI	CCCGC	2 cut(s)	233, 877
FauNDI	CATATG	1 cut(s)	1161
FblI	GTMKAC	1 cut(s)	1195
FokI	GGATG	8 cut(s)	232, 386, 409, 542, 845, 911, 971, 1246
FriOI	GRGCYC	3 cut(s)	9, 210, 1494
FspBI	CTAG	2 cut(s)	1128, 1726
GsaI	CCCAGC	3 cut(s)	396, 995, 1254
GsuI	CTGGAG	6 cut(s)	217, 434, 441, 692, 1044, 1485
HaeIII	GGCC	6 cut(s)	149, 335, 823, 1132, 1319, 1376
HapII	CCGG	4 cut(s)	109, 308, 462, 971
Hin1II	CATG	9 cut(s)	229, 692, 707, 795, 809, 943, 1059, 1385, 1518
HinfI	GANTC	9 cut(s)	115, 277, 685, 802, 925, 1002, 1066, 1222, 1455
HpaII	CCGG	4 cut(s)	109, 308, 462, 971
HphI	GGTGA	4 cut(s)	98, 394, 688, 1457
Hpy166II	GTNNAC	2 cut(s)	838, 1196
Hpy188I	TCNGA	8 cut(s)	99, 369, 404, 645, 768, 1567, 1587, 1662
Hpy188III	TCNNGA	9 cut(s)	44, 274, 413, 671, 806, 1023, 1226, 1382, 1433
Hpy8I	GTNNAC	2 cut(s)	838, 1196
Hpy99I	CGWCG	1 cut(s)	145
HpyAV	CCTTC	5 cut(s)	44, 374, 949, 1379, 1439
HpyCH4III	ACNGT	2 cut(s)	314, 1184
HpyCH4IV	ACGT	1 cut(s)	987
HpyCH4V	TGCA	8 cut(s)	692, 856, 1159, 1346, 1514, 1528, 1667, 1721
HpyF10VI	GCNNNNNNNGC	7 cut(s)	118, 698, 713, 853, 997, 1256, 1343
HpyF3I	CTNAG	8 cut(s)	96, 401, 608, 1134, 1224, 1398, 1559, 1564
HpySE526I	ACGT	1 cut(s)	987
Hsp92II	CATG	9 cut(s)	229, 692, 707, 795, 809, 943, 1059, 1385, 1518
KflI	GGGWCCC	1 cut(s)	243
KpnI	GGTACC	1 cut(s)	462
Kzo9I	GATC	4 cut(s)	871, 1363, 1683, 1702
LguI	GCTCTTC	1 cut(s)	1482
LmnI	GCTCC	8 cut(s)	4, 184, 194, 422, 733, 844, 1012, 1504
Lsp1109I	GCAGC	7 cut(s)	249, 529, 532, 667, 859, 1318, 1358
LweI	GCATC	8 cut(s)	364, 387, 1089, 1237, 1268, 1501, 1515, 1528
MaeI	CTAG	2 cut(s)	1128, 1726
MaeII	ACGT	1 cut(s)	987
MaeIII	GTNAC	4 cut(s)	104, 301, 477, 1178
MalI	GATC	4 cut(s)	873, 1365, 1685, 1704
MboI	GATC	4 cut(s)	871, 1363, 1683, 1702
MflI	RGATCY	3 cut(s)	871, 1363, 1702
MhlI	GDGCHC	4 cut(s)	9, 210, 1494, 1501
MluCI	AATT	7 cut(s)	557, 718, 769, 1215, 1571, 1609, 1643
MlyI	GAGTC	5 cut(s)	811, 934, 1011, 1060, 1216
MmeI	TCCRAC	1 cut(s)	172
Mph1103I	ATGCAT	1 cut(s)	1516
MseI	TTAA	4 cut(s)	350, 1202, 1359, 1473
MslI	CAYNNNNRTG	1 cut(s)	1325
MspA1I	CMGCKG	2 cut(s)	240, 392
MspCI	CTTAAG	1 cut(s)	1472
MspI	CCGG	4 cut(s)	109, 308, 462, 971
MspR9I	CCNGG	3 cut(s)	308, 1503, 1688
Mva1269I	GAATGC	1 cut(s)	856
MvaI	CCWGG	2 cut(s)	1503, 1688
MwoI	GCNNNNNNNGC	7 cut(s)	118, 698, 713, 853, 997, 1256, 1343
NciI	CCSGG	1 cut(s)	308
NdeI	CATATG	1 cut(s)	1161
NdeII	GATC	4 cut(s)	871, 1363, 1683, 1702
NlaIII	CATG	9 cut(s)	229, 692, 707, 795, 809, 943, 1059, 1385, 1518
NlaIV	GGNNCC	7 cut(s)	48, 244, 245, 460, 629, 873, 1014
NmeAIII	GCCGAG	1 cut(s)	1041
NmuCI	GTSAC	2 cut(s)	104, 1178
NsiI	ATGCAT	1 cut(s)	1516
NspI	RCATGY	3 cut(s)	229, 1059, 1518
NspV	TTCGAA	1 cut(s)	445
PaeI	GCATGC	2 cut(s)	229, 1518
PaeR7I	CTCGAG	1 cut(s)	437
PagI	TCATGA	2 cut(s)	805, 1381
PceI	AGGCCT	3 cut(s)	335, 823, 1132
PciSI	GCTCTTC	1 cut(s)	1482
PctI	GAATGC	1 cut(s)	856
PfeI	GAWTC	4 cut(s)	115, 277, 685, 1455
PleI	GAGTC	5 cut(s)	810, 933, 1010, 1060, 1216
PpsI	GAGTC	5 cut(s)	810, 933, 1010, 1060, 1216
PpuMI	RGGWCCY	2 cut(s)	46, 243
Psp124BI	GAGCTC	3 cut(s)	9, 210, 1494
Psp5II	RGGWCCY	2 cut(s)	46, 243
Psp6I	CCWGG	2 cut(s)	1501, 1686
PspFI	CCCAGC	3 cut(s)	392, 991, 1250
PspGI	CCWGG	2 cut(s)	1501, 1686
PspN4I	GGNNCC	7 cut(s)	48, 244, 245, 460, 629, 873, 1014
PspPI	GGNCC	3 cut(s)	46, 148, 243
PspPPI	RGGWCCY	2 cut(s)	46, 243
PspXI	VCTCGAGB	1 cut(s)	437
PstNI	CAGNNNCTG	2 cut(s)	1250, 1295
PsuI	RGATCY	3 cut(s)	871, 1363, 1702
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	5 cut(s)	460, 758, 839, 1274, 1634
RsaNI	GTAC	5 cut(s)	459, 757, 838, 1273, 1633
RseI	CAYNNNNRTG	1 cut(s)	1325
SacI	GAGCTC	3 cut(s)	9, 210, 1494
SapI	GCTCTTC	1 cut(s)	1482
SaqAI	TTAA	4 cut(s)	350, 1202, 1359, 1473
Sau3AI	GATC	4 cut(s)	871, 1363, 1683, 1702
Sau96I	GGNCC	3 cut(s)	46, 148, 243
ScaI	AGTACT	1 cut(s)	758
SchI	GAGTC	5 cut(s)	811, 934, 1011, 1060, 1216
ScrFI	CCNGG	3 cut(s)	308, 1503, 1688
SduI	GDGCHC	4 cut(s)	9, 210, 1494, 1501
SfaNI	GCATC	8 cut(s)	364, 387, 1089, 1237, 1268, 1501, 1515, 1528
Sfr274I	CTCGAG	1 cut(s)	437
SfuI	TTCGAA	1 cut(s)	445
SgrAI	CRCCGGYG	1 cut(s)	108
SinI	GGWCC	2 cut(s)	46, 243
SlaI	CTCGAG	1 cut(s)	437
SmiMI	CAYNNNNRTG	1 cut(s)	1325
SmlI	CTYRAG	5 cut(s)	266, 437, 737, 1313, 1472
SmoI	CTYRAG	5 cut(s)	266, 437, 737, 1313, 1472
SphI	GCATGC	2 cut(s)	229, 1518
Sse9I	AATT	7 cut(s)	557, 718, 769, 1215, 1571, 1609, 1643
SseBI	AGGCCT	3 cut(s)	335, 823, 1132
SspI	AATATT	1 cut(s)	1462
SspMI	CTAG	2 cut(s)	1128, 1726
SstI	GAGCTC	3 cut(s)	9, 210, 1494
StuI	AGGCCT	3 cut(s)	335, 823, 1132
StyD4I	CCNGG	3 cut(s)	306, 1501, 1686
StyI	CCWWGG	1 cut(s)	330
TaaI	ACNGT	2 cut(s)	314, 1184
TaiI	ACGT	1 cut(s)	990
TaqI	TCGA	7 cut(s)	275, 431, 438, 445, 633, 1575, 1596
TasI	AATT	7 cut(s)	557, 718, 769, 1215, 1571, 1609, 1643
TatI	WGTACW	4 cut(s)	756, 837, 1272, 1632
TauI	GCSGC	5 cut(s)	124, 149, 1312, 1337, 1713
TfiI	GAWTC	4 cut(s)	115, 277, 685, 1455
Tru1I	TTAA	4 cut(s)	350, 1202, 1359, 1473
Tru9I	TTAA	4 cut(s)	350, 1202, 1359, 1473
TscAI	CASTG	2 cut(s)	472, 912
TseFI	GTSAC	2 cut(s)	104, 1178
TseI	GCWGC	8 cut(s)	237, 542, 545, 655, 847, 1331, 1346, 1713
Tsp45I	GTSAC	2 cut(s)	104, 1178
TspDTI	ATGAA	6 cut(s)	515, 677, 695, 956, 1398, 1584
TspGWI	ACGGA	1 cut(s)	278
TspRI	CASTG	2 cut(s)	472, 912
Vha464I	CTTAAG	1 cut(s)	1472
VpaK11BI	GGWCC	2 cut(s)	46, 243
XapI	RAATTY	3 cut(s)	557, 769, 1571
XceI	RCATGY	3 cut(s)	229, 1059, 1518
XhoI	CTCGAG	1 cut(s)	437
XmiI	GTMKAC	1 cut(s)	1195
XspI	CTAG	2 cut(s)	1128, 1726
ZrmI	AGTACT	1 cut(s)	758
Zsp2I	ATGCAT	1 cut(s)	1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.