Ubiquitin carboxyl-terminal hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 195 - 325 | 1.4e-16 | Plant transposase (Ptta/En/Spm family) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 920 |
| AciI | CCGC | 3 cut(s) | 920, 982, 1302 |
| AclWI | GGATC | 3 cut(s) | 419, 588, 1142 |
| AcoI | YGGCCR | 1 cut(s) | 269 |
| AcsI | RAATTY | 4 cut(s) | 298, 585, 1049, 1187 |
| AcuI | CTGAAG | 1 cut(s) | 464 |
| AcyI | GRCGYC | 1 cut(s) | 358 |
| AfaI | GTAC | 2 cut(s) | 178, 717 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 539 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 57, 89 |
| AluBI | AGCT | 7 cut(s) | 73, 317, 462, 1046, 1094, 1280, 1337 |
| AluI | AGCT | 7 cut(s) | 73, 317, 462, 1046, 1094, 1280, 1337 |
| Alw21I | GWGCWC | 1 cut(s) | 289 |
| Alw44I | GTGCAC | 1 cut(s) | 285 |
| AlwI | GGATC | 3 cut(s) | 419, 588, 1142 |
| AoxI | GGCC | 1 cut(s) | 269 |
| ApaLI | GTGCAC | 1 cut(s) | 285 |
| ApeKI | GCWGC | 5 cut(s) | 317, 641, 1073, 1115, 1390 |
| ApoI | RAATTY | 4 cut(s) | 298, 585, 1049, 1187 |
| AspLEI | GCGC | 2 cut(s) | 262, 945 |
| AspS9I | GGNCC | 2 cut(s) | 194, 484 |
| AsuHPI | GGTGA | 1 cut(s) | 412 |
| AvaII | GGWCC | 2 cut(s) | 194, 484 |
| BaeGI | GKGCMC | 2 cut(s) | 289, 410 |
| BalI | TGGCCA | 1 cut(s) | 271 |
| Bbv12I | GWGCWC | 1 cut(s) | 289 |
| BbvI | GCAGC | 5 cut(s) | 304, 628, 1060, 1102, 1402 |
| BccI | CCATC | 6 cut(s) | 215, 317, 835, 1174, 1225, 1390 |
| BceAI | ACGGC | 2 cut(s) | 31, 450 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 543, 577, 1382, 1416 |
| BfaI | CTAG | 1 cut(s) | 441 |
| BfoI | RGCGCY | 1 cut(s) | 263 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 268 |
| BglII | AGATCT | 2 cut(s) | 446, 1139 |
| BisI | GCNGC | 5 cut(s) | 318, 642, 1074, 1116, 1391 |
| BlsI | GCNGC | 5 cut(s) | 319, 643, 1075, 1117, 1392 |
| Bme18I | GGWCC | 2 cut(s) | 194, 484 |
| BmgT120I | GGNCC | 2 cut(s) | 194, 484 |
| BmsI | GCATC | 5 cut(s) | 505, 688, 811, 833, 1313 |
| BpuEI | CTTGAG | 1 cut(s) | 120 |
| BsaHI | GRCGYC | 1 cut(s) | 358 |
| BsaJI | CCNNGG | 2 cut(s) | 831, 858 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 957, 987 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 539 |
| Bse1I | ACTGG | 1 cut(s) | 1367 |
| Bse3DI | GCAATG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 2 cut(s) | 831, 858 |
| BseGI | GGATG | 3 cut(s) | 622, 991, 1275 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BseMI | GCAATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 644 |
| BseNI | ACTGG | 1 cut(s) | 1367 |
| BseRI | GAGGAG | 2 cut(s) | 761, 875 |
| BseSI | GKGCMC | 2 cut(s) | 289, 410 |
| BseXI | GCAGC | 5 cut(s) | 304, 628, 1060, 1102, 1402 |
| BseYI | CCCAGC | 1 cut(s) | 1347 |
| Bsh1236I | CGCG | 1 cut(s) | 920 |
| BshFI | GGCC | 1 cut(s) | 271 |
| BsiHKAI | GWGCWC | 1 cut(s) | 289 |
| BsiSI | CCGG | 1 cut(s) | 707 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 271 |
| Bsp1286I | GDGCHC | 2 cut(s) | 289, 410 |
| Bsp1407I | TGTACA | 2 cut(s) | 176, 715 |
| Bsp143I | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| BspACI | CCGC | 3 cut(s) | 920, 982, 1302 |
| BspANI | GGCC | 1 cut(s) | 271 |
| BspCNI | CTCAG | 1 cut(s) | 643 |
| BspFNI | CGCG | 1 cut(s) | 920 |
| BspPI | GGATC | 3 cut(s) | 419, 588, 1142 |
| BsrDI | GCAATG | 1 cut(s) | 25 |
| BsrGI | TGTACA | 2 cut(s) | 176, 715 |
| BsrI | ACTGG | 1 cut(s) | 1367 |
| BssECI | CCNNGG | 2 cut(s) | 831, 858 |
| BssMI | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| BssNI | GRCGYC | 1 cut(s) | 358 |
| BssT1I | CCWWGG | 1 cut(s) | 831 |
| Bst4CI | ACNGT | 3 cut(s) | 488, 1030, 1065 |
| Bst6I | CTCTTC | 1 cut(s) | 1170 |
| BstACI | GRCGYC | 1 cut(s) | 358 |
| BstAUI | TGTACA | 2 cut(s) | 176, 715 |
| BstC8I | GCNNGC | 1 cut(s) | 1044 |
| BstDEI | CTNAG | 4 cut(s) | 630, 789, 1119, 1253 |
| BstF5I | GGATG | 3 cut(s) | 622, 991, 1275 |
| BstFNI | CGCG | 1 cut(s) | 920 |
| BstH2I | RGCGCY | 1 cut(s) | 263 |
| BstHHI | GCGC | 2 cut(s) | 262, 945 |
| BstKTI | GATC | 6 cut(s) | 427, 449, 583, 1137, 1142, 1201 |
| BstMBI | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 268, 1043, 1310 |
| BstNSI | RCATGY | 1 cut(s) | 857 |
| BstSLI | GKGCMC | 2 cut(s) | 289, 410 |
| BstUI | CGCG | 1 cut(s) | 920 |
| BstV1I | GCAGC | 5 cut(s) | 304, 628, 1060, 1102, 1402 |
| BstX2I | RGATCY | 3 cut(s) | 424, 446, 1139 |
| BstYI | RGATCY | 3 cut(s) | 424, 446, 1139 |
| BsuRI | GGCC | 1 cut(s) | 271 |
| BtsCI | GGATG | 3 cut(s) | 622, 991, 1275 |
| BtsI | GCAGTG | 1 cut(s) | 843 |
| BtsIMutI | CAGTG | 2 cut(s) | 596, 843 |
| Cac8I | GCNNGC | 1 cut(s) | 1044 |
| CfoI | GCGC | 2 cut(s) | 262, 945 |
| Cfr13I | GGNCC | 2 cut(s) | 194, 484 |
| CseI | GACGC | 1 cut(s) | 347 |
| Csp6I | GTAC | 2 cut(s) | 177, 716 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 572, 607, 1011, 1046 |
| CviAII | CATG | 4 cut(s) | 390, 719, 854, 1394 |
| CviQI | GTAC | 2 cut(s) | 177, 716 |
| DdeI | CTNAG | 4 cut(s) | 630, 789, 1119, 1253 |
| DpnI | GATC | 6 cut(s) | 426, 448, 582, 1136, 1141, 1200 |
| DpnII | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| DraI | TTTAAA | 1 cut(s) | 1192 |
| EaeI | YGGCCR | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 1170 |
| EarI | CTCTTC | 1 cut(s) | 1170 |
| Eco130I | CCWWGG | 1 cut(s) | 831 |
| Eco32I | GATATC | 1 cut(s) | 1400 |
| Eco47I | GGWCC | 2 cut(s) | 194, 484 |
| Eco57I | CTGAAG | 1 cut(s) | 464 |
| EcoRV | GATATC | 1 cut(s) | 1400 |
| EcoT14I | CCWWGG | 1 cut(s) | 831 |
| EcoT22I | ATGCAT | 2 cut(s) | 681, 826 |
| ErhI | CCWWGG | 1 cut(s) | 831 |
| FaeI | CATG | 4 cut(s) | 393, 722, 857, 1397 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FatI | CATG | 4 cut(s) | 389, 718, 853, 1393 |
| FauI | CCCGC | 1 cut(s) | 975 |
| Fnu4HI | GCNGC | 5 cut(s) | 318, 642, 1074, 1116, 1391 |
| FokI | GGATG | 3 cut(s) | 629, 998, 1282 |
| Fsp4HI | GCNGC | 5 cut(s) | 318, 642, 1074, 1116, 1391 |
| FspBI | CTAG | 1 cut(s) | 441 |
| GlaI | GCGC | 2 cut(s) | 261, 944 |
| GluI | GCNGC | 5 cut(s) | 318, 642, 1074, 1116, 1391 |
| GsaI | CCCAGC | 1 cut(s) | 1351 |
| HaeII | RGCGCY | 1 cut(s) | 263 |
| HaeIII | GGCC | 1 cut(s) | 271 |
| HapII | CCGG | 1 cut(s) | 707 |
| HgaI | GACGC | 1 cut(s) | 347 |
| HhaI | GCGC | 2 cut(s) | 262, 945 |
| Hin1I | GRCGYC | 1 cut(s) | 358 |
| Hin1II | CATG | 4 cut(s) | 393, 722, 857, 1397 |
| Hin6I | GCGC | 2 cut(s) | 260, 943 |
| HinP1I | GCGC | 2 cut(s) | 260, 943 |
| HincII | GTYRAC | 1 cut(s) | 780 |
| HindII | GTYRAC | 1 cut(s) | 780 |
| HinfI | GANTC | 4 cut(s) | 376, 535, 781, 972 |
| HpaII | CCGG | 1 cut(s) | 707 |
| HphI | GGTGA | 1 cut(s) | 412 |
| Hpy166II | GTNNAC | 4 cut(s) | 25, 61, 287, 780 |
| Hpy188I | TCNGA | 4 cut(s) | 633, 1139, 1144, 1203 |
| Hpy188III | TCNNGA | 3 cut(s) | 189, 482, 569 |
| Hpy8I | GTNNAC | 4 cut(s) | 25, 61, 287, 780 |
| HpyAV | CCTTC | 4 cut(s) | 397, 589, 631, 1099 |
| HpyCH4III | ACNGT | 3 cut(s) | 488, 1030, 1065 |
| HpyCH4V | TGCA | 8 cut(s) | 287, 452, 564, 679, 824, 1042, 1076, 1390 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 268, 1043, 1310 |
| HpyF3I | CTNAG | 4 cut(s) | 630, 789, 1119, 1253 |
| Hsp92I | GRCGYC | 1 cut(s) | 358 |
| Hsp92II | CATG | 4 cut(s) | 393, 722, 857, 1397 |
| HspAI | GCGC | 2 cut(s) | 260, 943 |
| Kzo9I | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| LmnI | GCTCC | 5 cut(s) | 257, 748, 965, 1237, 1321 |
| Lsp1109I | GCAGC | 5 cut(s) | 304, 628, 1060, 1102, 1402 |
| LweI | GCATC | 5 cut(s) | 505, 688, 811, 833, 1313 |
| MaeI | CTAG | 1 cut(s) | 441 |
| MaeIII | GTNAC | 2 cut(s) | 359, 504 |
| MalI | GATC | 6 cut(s) | 426, 448, 582, 1136, 1141, 1200 |
| MboI | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| MboII | GAAGA | 7 cut(s) | 230, 635, 920, 1174, 1187, 1229, 1240 |
| MfeI | CAATTG | 1 cut(s) | 509 |
| MflI | RGATCY | 3 cut(s) | 424, 446, 1139 |
| MhlI | GDGCHC | 2 cut(s) | 289, 410 |
| MlsI | TGGCCA | 1 cut(s) | 271 |
| MluNI | TGGCCA | 1 cut(s) | 271 |
| MlyI | GAGTC | 3 cut(s) | 385, 775, 981 |
| MmeI | TCCRAC | 3 cut(s) | 470, 1047, 1400 |
| Mox20I | TGGCCA | 1 cut(s) | 271 |
| Mph1103I | ATGCAT | 2 cut(s) | 681, 826 |
| MscI | TGGCCA | 1 cut(s) | 271 |
| MseI | TTAA | 6 cut(s) | 30, 240, 471, 558, 1082, 1191 |
| Msp20I | TGGCCA | 1 cut(s) | 271 |
| MspI | CCGG | 1 cut(s) | 707 |
| MunI | CAATTG | 1 cut(s) | 509 |
| MvnI | CGCG | 1 cut(s) | 920 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 268, 1043, 1310 |
| NdeII | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| NlaIII | CATG | 4 cut(s) | 393, 722, 857, 1397 |
| NmeAIII | GCCGAG | 1 cut(s) | 883 |
| NmuCI | GTSAC | 2 cut(s) | 359, 504 |
| NsiI | ATGCAT | 2 cut(s) | 681, 826 |
| NspI | RCATGY | 1 cut(s) | 857 |
| PfeI | GAWTC | 1 cut(s) | 535 |
| PkrI | GCNGC | 5 cut(s) | 319, 643, 1075, 1117, 1392 |
| PleI | GAGTC | 3 cut(s) | 384, 775, 980 |
| PpsI | GAGTC | 3 cut(s) | 384, 775, 980 |
| PspFI | CCCAGC | 1 cut(s) | 1347 |
| PspPI | GGNCC | 2 cut(s) | 194, 484 |
| PsuI | RGATCY | 3 cut(s) | 424, 446, 1139 |
| RsaI | GTAC | 2 cut(s) | 178, 717 |
| RsaNI | GTAC | 2 cut(s) | 177, 716 |
| SaqAI | TTAA | 6 cut(s) | 30, 240, 471, 558, 1082, 1191 |
| SatI | GCNGC | 5 cut(s) | 318, 642, 1074, 1116, 1391 |
| Sau3AI | GATC | 6 cut(s) | 424, 446, 580, 1134, 1139, 1198 |
| Sau96I | GGNCC | 2 cut(s) | 194, 484 |
| SchI | GAGTC | 3 cut(s) | 385, 775, 981 |
| SduI | GDGCHC | 2 cut(s) | 289, 410 |
| SfaNI | GCATC | 5 cut(s) | 505, 688, 811, 833, 1313 |
| SinI | GGWCC | 2 cut(s) | 194, 484 |
| SmlI | CTYRAG | 1 cut(s) | 135 |
| SmoI | CTYRAG | 1 cut(s) | 135 |
| SsiI | CCGC | 3 cut(s) | 920, 982, 1302 |
| SspI | AATATT | 6 cut(s) | 202, 346, 524, 611, 883, 1363 |
| SspMI | CTAG | 1 cut(s) | 441 |
| StyI | CCWWGG | 1 cut(s) | 831 |
| TaaI | ACNGT | 3 cut(s) | 488, 1030, 1065 |
| TaqI | TCGA | 1 cut(s) | 1053 |
| TatI | WGTACW | 2 cut(s) | 176, 715 |
| TfiI | GAWTC | 1 cut(s) | 535 |
| Tru1I | TTAA | 6 cut(s) | 30, 240, 471, 558, 1082, 1191 |
| Tru9I | TTAA | 6 cut(s) | 30, 240, 471, 558, 1082, 1191 |
| TscAI | CASTG | 2 cut(s) | 596, 843 |
| TseFI | GTSAC | 2 cut(s) | 359, 504 |
| TseI | GCWGC | 5 cut(s) | 317, 641, 1073, 1115, 1390 |
| Tsp45I | GTSAC | 2 cut(s) | 359, 504 |
| TspDTI | ATGAA | 6 cut(s) | 165, 197, 735, 864, 989, 1286 |
| TspRI | CASTG | 2 cut(s) | 596, 843 |
| VneI | GTGCAC | 1 cut(s) | 285 |
| VpaK11BI | GGWCC | 2 cut(s) | 194, 484 |
| XapI | RAATTY | 4 cut(s) | 298, 585, 1049, 1187 |
| XceI | RCATGY | 1 cut(s) | 857 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 838 |
| XspI | CTAG | 1 cut(s) | 441 |
| Zsp2I | ATGCAT | 2 cut(s) | 681, 826 |