Ubiquitin carboxyl-terminal hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MATH_2 | PF22486 | 123 - 213 | 7.8e-14 | MATH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 59 |
| Acc16I | TGCGCA | 1 cut(s) | 338 |
| AccIII | TCCGGA | 1 cut(s) | 535 |
| AciI | CCGC | 5 cut(s) | 65, 205, 212, 311, 689 |
| AclWI | GGATC | 3 cut(s) | 416, 429, 527 |
| AcsI | RAATTY | 1 cut(s) | 597 |
| AcuI | CTGAAG | 3 cut(s) | 83, 238, 479 |
| AcyI | GRCGYC | 2 cut(s) | 56, 655 |
| AfaI | GTAC | 3 cut(s) | 104, 201, 577 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 211 |
| AgsI | TTSAA | 3 cut(s) | 396, 446, 607 |
| AjnI | CCWGG | 2 cut(s) | 155, 550 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 582, 614 |
| AluBI | AGCT | 2 cut(s) | 177, 240 |
| AluI | AGCT | 2 cut(s) | 177, 240 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| AlwI | GGATC | 3 cut(s) | 416, 429, 527 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 125 |
| Ama87I | CYCGRG | 1 cut(s) | 740 |
| Aor13HI | TCCGGA | 1 cut(s) | 535 |
| AoxI | GGCC | 2 cut(s) | 66, 736 |
| ApeKI | GCWGC | 2 cut(s) | 152, 177 |
| ApoI | RAATTY | 1 cut(s) | 597 |
| AseI | ATTAAT | 1 cut(s) | 486 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 543 |
| AspA2I | CCTAGG | 1 cut(s) | 5 |
| AspLEI | GCGC | 2 cut(s) | 152, 339 |
| AspS9I | GGNCC | 1 cut(s) | 737 |
| AsuC2I | CCSGG | 2 cut(s) | 741, 742 |
| AsuHPI | GGTGA | 1 cut(s) | 108 |
| AvaI | CYCGRG | 1 cut(s) | 740 |
| AvrII | CCTAGG | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 421 |
| BbvI | GCAGC | 2 cut(s) | 164, 164 |
| BceAI | ACGGC | 1 cut(s) | 702 |
| BciT130I | CCWGG | 2 cut(s) | 157, 552 |
| BclI | TGATCA | 1 cut(s) | 613 |
| BcnI | CCSGG | 2 cut(s) | 741, 742 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfaI | CTAG | 3 cut(s) | 6, 273, 350 |
| BisI | GCNGC | 4 cut(s) | 66, 153, 178, 213 |
| BlnI | CCTAGG | 1 cut(s) | 5 |
| BlsI | GCNGC | 4 cut(s) | 67, 154, 179, 214 |
| BmcAI | AGTACT | 2 cut(s) | 104, 201 |
| Bme1390I | CCNGG | 4 cut(s) | 157, 552, 741, 742 |
| BmeT110I | CYCGRG | 1 cut(s) | 740 |
| BmgT120I | GGNCC | 1 cut(s) | 737 |
| BmiI | GGNNCC | 2 cut(s) | 423, 739 |
| BmrFI | CCNGG | 4 cut(s) | 157, 552, 741, 742 |
| BmrI | ACTGGG | 1 cut(s) | 191 |
| BmsI | GCATC | 4 cut(s) | 118, 324, 343, 594 |
| BmuI | ACTGGG | 1 cut(s) | 191 |
| BoxI | GACNNNNGTC | 1 cut(s) | 689 |
| BpuMI | CCSGG | 2 cut(s) | 741, 742 |
| BsaHI | GRCGYC | 2 cut(s) | 56, 655 |
| BsaJI | CCNNGG | 4 cut(s) | 5, 477, 739, 740 |
| BsaWI | WCCGGW | 1 cut(s) | 535 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 532, 562 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 211 |
| Bse118I | RCCGGY | 1 cut(s) | 61 |
| Bse1I | ACTGG | 3 cut(s) | 119, 197, 531 |
| Bse3DI | GCAATG | 2 cut(s) | 164, 176 |
| BseAI | TCCGGA | 1 cut(s) | 535 |
| BseBI | CCWGG | 2 cut(s) | 157, 552 |
| BseDI | CCNNGG | 4 cut(s) | 5, 477, 739, 740 |
| BseGI | GGATG | 2 cut(s) | 339, 585 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 211 |
| BseMI | GCAATG | 2 cut(s) | 164, 176 |
| BseNI | ACTGG | 3 cut(s) | 119, 197, 531 |
| BseXI | GCAGC | 2 cut(s) | 164, 164 |
| BsgI | GTGCAG | 1 cut(s) | 116 |
| BshFI | GGCC | 2 cut(s) | 68, 738 |
| BsiHKCI | CYCGRG | 1 cut(s) | 740 |
| BsiSI | CCGG | 3 cut(s) | 62, 536, 741 |
| BslFI | GGGAC | 1 cut(s) | 179 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 211 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| BsmFI | GGGAC | 1 cut(s) | 179 |
| BsnI | GGCC | 2 cut(s) | 68, 738 |
| BsoBI | CYCGRG | 1 cut(s) | 740 |
| Bsp13I | TCCGGA | 1 cut(s) | 535 |
| Bsp1407I | TGTACA | 1 cut(s) | 575 |
| Bsp143I | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| BspACI | CCGC | 5 cut(s) | 65, 205, 212, 311, 689 |
| BspANI | GGCC | 2 cut(s) | 68, 738 |
| BspEI | TCCGGA | 1 cut(s) | 535 |
| BspLI | GGNNCC | 2 cut(s) | 423, 739 |
| BspPI | GGATC | 3 cut(s) | 416, 429, 527 |
| BsrDI | GCAATG | 2 cut(s) | 164, 176 |
| BsrFI | RCCGGY | 1 cut(s) | 61 |
| BsrGI | TGTACA | 1 cut(s) | 575 |
| BsrI | ACTGG | 3 cut(s) | 119, 197, 531 |
| BssAI | RCCGGY | 1 cut(s) | 61 |
| BssECI | CCNNGG | 4 cut(s) | 5, 477, 739, 740 |
| BssMI | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| BssNI | GRCGYC | 2 cut(s) | 56, 655 |
| BssT1I | CCWWGG | 2 cut(s) | 5, 477 |
| Bst2UI | CCWGG | 2 cut(s) | 157, 552 |
| Bst4CI | ACNGT | 2 cut(s) | 376, 575 |
| Bst6I | CTCTTC | 2 cut(s) | 411, 616 |
| BstACI | GRCGYC | 2 cut(s) | 56, 655 |
| BstAUI | TGTACA | 1 cut(s) | 575 |
| BstC8I | GCNNGC | 2 cut(s) | 63, 242 |
| BstDEI | CTNAG | 2 cut(s) | 304, 766 |
| BstF5I | GGATG | 2 cut(s) | 339, 585 |
| BstHHI | GCGC | 2 cut(s) | 152, 339 |
| BstKTI | GATC | 5 cut(s) | 424, 535, 595, 616, 711 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMBI | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 218, 695 |
| BstNI | CCWGG | 2 cut(s) | 157, 552 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 689 |
| BstSCI | CCNGG | 4 cut(s) | 155, 550, 739, 740 |
| BstV1I | GCAGC | 2 cut(s) | 164, 164 |
| BstX2I | RGATCY | 1 cut(s) | 421 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 171 |
| BstYI | RGATCY | 1 cut(s) | 421 |
| BsuRI | GGCC | 2 cut(s) | 68, 738 |
| BtsCI | GGATG | 2 cut(s) | 339, 585 |
| BtsIMutI | CAGTG | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 2 cut(s) | 63, 242 |
| CaiI | CAGNNNCTG | 1 cut(s) | 125 |
| CfoI | GCGC | 2 cut(s) | 152, 339 |
| Cfr10I | RCCGGY | 1 cut(s) | 61 |
| Cfr13I | GGNCC | 1 cut(s) | 737 |
| Cfr9I | CCCGGG | 1 cut(s) | 740 |
| CseI | GACGC | 1 cut(s) | 644 |
| Csp6I | GTAC | 3 cut(s) | 103, 200, 576 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 72, 107 |
| CviAII | CATG | 7 cut(s) | 52, 247, 506, 611, 617, 694, 712 |
| CviQI | GTAC | 3 cut(s) | 103, 200, 576 |
| DdeI | CTNAG | 2 cut(s) | 304, 766 |
| DpnI | GATC | 5 cut(s) | 423, 534, 594, 615, 710 |
| DpnII | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| DraI | TTTAAA | 1 cut(s) | 523 |
| Eam1104I | CTCTTC | 2 cut(s) | 411, 616 |
| EarI | CTCTTC | 2 cut(s) | 411, 616 |
| Eco130I | CCWWGG | 2 cut(s) | 5, 477 |
| Eco32I | GATATC | 1 cut(s) | 234 |
| Eco57I | CTGAAG | 3 cut(s) | 83, 238, 479 |
| Eco88I | CYCGRG | 1 cut(s) | 740 |
| EcoRII | CCWGG | 2 cut(s) | 155, 550 |
| EcoRV | GATATC | 1 cut(s) | 234 |
| EcoT14I | CCWWGG | 2 cut(s) | 5, 477 |
| ErhI | CCWWGG | 2 cut(s) | 5, 477 |
| FaeI | CATG | 7 cut(s) | 55, 250, 509, 614, 620, 697, 715 |
| FaqI | GGGAC | 1 cut(s) | 179 |
| FatI | CATG | 7 cut(s) | 51, 246, 505, 610, 616, 693, 711 |
| FauNDI | CATATG | 1 cut(s) | 427 |
| FbaI | TGATCA | 1 cut(s) | 613 |
| Fnu4HI | GCNGC | 4 cut(s) | 66, 153, 178, 213 |
| FokI | GGATG | 2 cut(s) | 346, 572 |
| Fsp4HI | GCNGC | 4 cut(s) | 66, 153, 178, 213 |
| FspBI | CTAG | 3 cut(s) | 6, 273, 350 |
| FspI | TGCGCA | 1 cut(s) | 338 |
| GlaI | GCGC | 2 cut(s) | 151, 338 |
| GluI | GCNGC | 4 cut(s) | 66, 153, 178, 213 |
| HaeIII | GGCC | 2 cut(s) | 68, 738 |
| HapII | CCGG | 3 cut(s) | 62, 536, 741 |
| HgaI | GACGC | 1 cut(s) | 644 |
| HhaI | GCGC | 2 cut(s) | 152, 339 |
| Hin1I | GRCGYC | 2 cut(s) | 56, 655 |
| Hin1II | CATG | 7 cut(s) | 55, 250, 509, 614, 620, 697, 715 |
| Hin6I | GCGC | 2 cut(s) | 150, 337 |
| HinP1I | GCGC | 2 cut(s) | 150, 337 |
| HincII | GTYRAC | 1 cut(s) | 659 |
| HindII | GTYRAC | 1 cut(s) | 659 |
| HinfI | GANTC | 3 cut(s) | 185, 260, 431 |
| HpaII | CCGG | 3 cut(s) | 62, 536, 741 |
| HphI | GGTGA | 1 cut(s) | 108 |
| Hpy166II | GTNNAC | 2 cut(s) | 578, 659 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 459 |
| Hpy188III | TCNNGA | 3 cut(s) | 350, 435, 536 |
| Hpy8I | GTNNAC | 2 cut(s) | 578, 659 |
| Hpy99I | CGWCG | 2 cut(s) | 61, 688 |
| HpyAV | CCTTC | 2 cut(s) | 107, 554 |
| HpyCH4III | ACNGT | 2 cut(s) | 376, 575 |
| HpyCH4IV | ACGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 5 cut(s) | 25, 133, 169, 569, 632 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 218, 695 |
| HpyF3I | CTNAG | 2 cut(s) | 304, 766 |
| HpySE526I | ACGT | 1 cut(s) | 56 |
| Hsp92I | GRCGYC | 2 cut(s) | 56, 655 |
| Hsp92II | CATG | 7 cut(s) | 55, 250, 509, 614, 620, 697, 715 |
| HspAI | GCGC | 2 cut(s) | 150, 337 |
| Kpn2I | TCCGGA | 1 cut(s) | 535 |
| KroI | GCCGGC | 1 cut(s) | 61 |
| KroNI | GCCGGC | 1 cut(s) | 63 |
| Ksp22I | TGATCA | 1 cut(s) | 613 |
| Kzo9I | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| LmnI | GCTCC | 1 cut(s) | 174 |
| Lsp1109I | GCAGC | 2 cut(s) | 164, 164 |
| LweI | GCATC | 4 cut(s) | 118, 324, 343, 594 |
| MaeI | CTAG | 3 cut(s) | 6, 273, 350 |
| MaeII | ACGT | 1 cut(s) | 56 |
| MaeIII | GTNAC | 1 cut(s) | 114 |
| MalI | GATC | 5 cut(s) | 423, 534, 594, 615, 710 |
| MboI | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| MboII | GAAGA | 4 cut(s) | 244, 428, 472, 633 |
| MfeI | CAATTG | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 421 |
| MluCI | AATT | 4 cut(s) | 20, 89, 483, 597 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MmeI | TCCRAC | 3 cut(s) | 250, 386, 652 |
| MnlI | CCTC | 5 cut(s) | 79, 310, 412, 558, 617 |
| MreI | CGCCGGCG | 1 cut(s) | 61 |
| MroI | TCCGGA | 1 cut(s) | 535 |
| MroNI | GCCGGC | 1 cut(s) | 61 |
| MroXI | GAANNNNTTC | 1 cut(s) | 543 |
| MseI | TTAA | 4 cut(s) | 33, 486, 522, 775 |
| MslI | CAYNNNNRTG | 2 cut(s) | 169, 615 |
| MspA1I | CMGCKG | 1 cut(s) | 212 |
| MspI | CCGG | 3 cut(s) | 62, 536, 741 |
| MspR9I | CCNGG | 4 cut(s) | 157, 552, 741, 742 |
| MunI | CAATTG | 1 cut(s) | 20 |
| MvaI | CCWGG | 2 cut(s) | 157, 552 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 218, 695 |
| NaeI | GCCGGC | 1 cut(s) | 63 |
| NciI | CCSGG | 2 cut(s) | 741, 742 |
| NdeI | CATATG | 1 cut(s) | 427 |
| NdeII | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| NgoMIV | GCCGGC | 1 cut(s) | 61 |
| NlaIII | CATG | 7 cut(s) | 55, 250, 509, 614, 620, 697, 715 |
| NlaIV | GGNNCC | 2 cut(s) | 423, 739 |
| NmuCI | GTSAC | 1 cut(s) | 114 |
| NsbI | TGCGCA | 1 cut(s) | 338 |
| PdiI | GCCGGC | 1 cut(s) | 63 |
| PdmI | GAANNNNTTC | 1 cut(s) | 543 |
| PfeI | GAWTC | 2 cut(s) | 185, 431 |
| PkrI | GCNGC | 4 cut(s) | 67, 154, 179, 214 |
| PleI | GAGTC | 1 cut(s) | 268 |
| PpsI | GAGTC | 1 cut(s) | 268 |
| PshAI | GACNNNNGTC | 1 cut(s) | 689 |
| PshBI | ATTAAT | 1 cut(s) | 486 |
| Psp6I | CCWGG | 2 cut(s) | 155, 550 |
| PspGI | CCWGG | 2 cut(s) | 155, 550 |
| PspN4I | GGNNCC | 2 cut(s) | 423, 739 |
| PspPI | GGNCC | 1 cut(s) | 737 |
| PstNI | CAGNNNCTG | 1 cut(s) | 125 |
| PsuI | RGATCY | 1 cut(s) | 421 |
| RsaI | GTAC | 3 cut(s) | 104, 201, 577 |
| RsaNI | GTAC | 3 cut(s) | 103, 200, 576 |
| RseI | CAYNNNNRTG | 2 cut(s) | 169, 615 |
| SaqAI | TTAA | 4 cut(s) | 33, 486, 522, 775 |
| SatI | GCNGC | 4 cut(s) | 66, 153, 178, 213 |
| Sau3AI | GATC | 5 cut(s) | 421, 532, 592, 613, 708 |
| Sau96I | GGNCC | 1 cut(s) | 737 |
| ScaI | AGTACT | 2 cut(s) | 104, 201 |
| SchI | GAGTC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 4 cut(s) | 157, 552, 741, 742 |
| SetI | ASST | 6 cut(s) | 11, 59, 161, 179, 242, 321 |
| SfaNI | GCATC | 4 cut(s) | 118, 324, 343, 594 |
| SgrAI | CRCCGGYG | 1 cut(s) | 61 |
| SmaI | CCCGGG | 1 cut(s) | 742 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 169, 615 |
| Sse9I | AATT | 4 cut(s) | 20, 89, 483, 597 |
| SsiI | CCGC | 5 cut(s) | 65, 205, 212, 311, 689 |
| SspMI | CTAG | 3 cut(s) | 6, 273, 350 |
| StyD4I | CCNGG | 4 cut(s) | 155, 550, 739, 740 |
| StyI | CCWWGG | 2 cut(s) | 5, 477 |
| TaaI | ACNGT | 2 cut(s) | 376, 575 |
| TaiI | ACGT | 1 cut(s) | 59 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TasI | AATT | 4 cut(s) | 20, 89, 483, 597 |
| TatI | WGTACW | 3 cut(s) | 102, 199, 575 |
| TauI | GCSGC | 2 cut(s) | 68, 215 |
| TfiI | GAWTC | 2 cut(s) | 185, 431 |
| Tru1I | TTAA | 4 cut(s) | 33, 486, 522, 775 |
| Tru9I | TTAA | 4 cut(s) | 33, 486, 522, 775 |
| TscAI | CASTG | 1 cut(s) | 379 |
| TseFI | GTSAC | 1 cut(s) | 114 |
| TseI | GCWGC | 2 cut(s) | 152, 177 |
| Tsp45I | GTSAC | 1 cut(s) | 114 |
| TspDTI | ATGAA | 2 cut(s) | 444, 590 |
| TspMI | CCCGGG | 1 cut(s) | 740 |
| TspRI | CASTG | 1 cut(s) | 379 |
| VspI | ATTAAT | 1 cut(s) | 486 |
| XapI | RAATTY | 1 cut(s) | 597 |
| XbaI | TCTAGA | 1 cut(s) | 349 |
| XmaI | CCCGGG | 1 cut(s) | 740 |
| XmaJI | CCTAGG | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 1 cut(s) | 543 |
| XspI | CTAG | 3 cut(s) | 6, 273, 350 |
| ZraI | GACGTC | 1 cut(s) | 57 |
| ZrmI | AGTACT | 2 cut(s) | 104, 201 |