Ubiquitin carboxyl-terminal hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MATH_2 | PF22486 | 131 - 231 | 1.6e-11 | MATH domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 287 |
| Acc36I | ACCTGC | 2 cut(s) | 287, 364 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 421 |
| AciI | CCGC | 1 cut(s) | 644 |
| AclWI | GGATC | 1 cut(s) | 58 |
| AcoI | YGGCCR | 1 cut(s) | 141 |
| AcsI | RAATTY | 1 cut(s) | 130 |
| AfaI | GTAC | 3 cut(s) | 254, 368, 717 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 421 |
| AgeI | ACCGGT | 1 cut(s) | 616 |
| AgsI | TTSAA | 2 cut(s) | 266, 484 |
| AjiI | CACGTC | 2 cut(s) | 147, 573 |
| AleI | CACNNNNGTG | 2 cut(s) | 189, 281 |
| Alw26I | GTCTC | 2 cut(s) | 101, 156 |
| AlwI | GGATC | 1 cut(s) | 58 |
| AoxI | GGCC | 1 cut(s) | 141 |
| ApoI | RAATTY | 1 cut(s) | 130 |
| AsiGI | ACCGGT | 1 cut(s) | 616 |
| AsuHPI | GGTGA | 3 cut(s) | 69, 203, 606 |
| BalI | TGGCCA | 1 cut(s) | 143 |
| BbsI | GAAGAC | 1 cut(s) | 567 |
| BbvCI | CCTCAGC | 2 cut(s) | 294, 687 |
| BccI | CCATC | 1 cut(s) | 133 |
| BclI | TGATCA | 2 cut(s) | 235, 660 |
| BcoDI | GTCTC | 2 cut(s) | 101, 156 |
| BfmI | CTRYAG | 1 cut(s) | 719 |
| BfuAI | ACCTGC | 2 cut(s) | 287, 364 |
| BmcAI | AGTACT | 2 cut(s) | 254, 717 |
| BmgBI | CACGTC | 2 cut(s) | 147, 573 |
| BpiI | GAAGAC | 1 cut(s) | 567 |
| BpmI | CTGGAG | 1 cut(s) | 701 |
| Bpu10I | CCTNAGC | 2 cut(s) | 294, 687 |
| BsaBI | GATNNNNATC | 1 cut(s) | 659 |
| BsaJI | CCNNGG | 4 cut(s) | 10, 402, 415, 700 |
| BsaWI | WCCGGW | 1 cut(s) | 616 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 378, 408 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 421 |
| Bse118I | RCCGGY | 1 cut(s) | 616 |
| Bse1I | ACTGG | 1 cut(s) | 174 |
| Bse8I | GATNNNNATC | 1 cut(s) | 659 |
| BseDI | CCNNGG | 4 cut(s) | 10, 402, 415, 700 |
| BseGI | GGATG | 3 cut(s) | 20, 144, 660 |
| BseJI | GATNNNNATC | 1 cut(s) | 659 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BseMII | CTCAG | 3 cut(s) | 51, 285, 678 |
| BseNI | ACTGG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 1 cut(s) | 462 |
| BshFI | GGCC | 1 cut(s) | 143 |
| BshTI | ACCGGT | 1 cut(s) | 616 |
| BsiSI | CCGG | 1 cut(s) | 617 |
| BslFI | GGGAC | 1 cut(s) | 439 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 421 |
| BsmAI | GTCTC | 2 cut(s) | 101, 156 |
| BsmBI | CGTCTC | 1 cut(s) | 156 |
| BsmFI | GGGAC | 1 cut(s) | 439 |
| BsmI | GAATGC | 1 cut(s) | 675 |
| BsnI | GGCC | 1 cut(s) | 143 |
| Bsp1407I | TGTACA | 1 cut(s) | 366 |
| Bsp143I | GATC | 4 cut(s) | 63, 235, 517, 660 |
| Bsp19I | CCATGG | 2 cut(s) | 10, 700 |
| BspACI | CCGC | 1 cut(s) | 644 |
| BspANI | GGCC | 1 cut(s) | 143 |
| BspCNI | CTCAG | 3 cut(s) | 52, 286, 679 |
| BspHI | TCATGA | 1 cut(s) | 120 |
| BspMI | ACCTGC | 2 cut(s) | 287, 364 |
| BspPI | GGATC | 1 cut(s) | 58 |
| BsrFI | RCCGGY | 1 cut(s) | 616 |
| BsrGI | TGTACA | 1 cut(s) | 366 |
| BsrI | ACTGG | 1 cut(s) | 174 |
| BssAI | RCCGGY | 1 cut(s) | 616 |
| BssECI | CCNNGG | 4 cut(s) | 10, 402, 415, 700 |
| BssMI | GATC | 4 cut(s) | 63, 235, 517, 660 |
| BssT1I | CCWWGG | 3 cut(s) | 10, 402, 700 |
| Bst4CI | ACNGT | 3 cut(s) | 95, 560, 697 |
| BstAUI | TGTACA | 1 cut(s) | 366 |
| BstC8I | GCNNGC | 2 cut(s) | 506, 528 |
| BstDEI | CTNAG | 4 cut(s) | 60, 294, 594, 687 |
| BstDSI | CCRYGG | 3 cut(s) | 10, 415, 700 |
| BstF5I | GGATG | 3 cut(s) | 20, 144, 660 |
| BstKTI | GATC | 4 cut(s) | 66, 238, 520, 663 |
| BstMAI | GTCTC | 2 cut(s) | 101, 156 |
| BstMBI | GATC | 4 cut(s) | 63, 235, 517, 660 |
| BstNSI | RCATGY | 1 cut(s) | 530 |
| BstSFI | CTRYAG | 1 cut(s) | 719 |
| BstV2I | GAAGAC | 1 cut(s) | 567 |
| BstX2I | RGATCY | 1 cut(s) | 63 |
| BstYI | RGATCY | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 143 |
| BtgI | CCRYGG | 3 cut(s) | 10, 415, 700 |
| BtrI | CACGTC | 2 cut(s) | 147, 573 |
| BtsCI | GGATG | 3 cut(s) | 20, 144, 660 |
| BtsIMutI | CAGTG | 4 cut(s) | 556, 571, 643, 693 |
| BveI | ACCTGC | 2 cut(s) | 287, 364 |
| Cac8I | GCNNGC | 2 cut(s) | 506, 528 |
| CciI | TCATGA | 1 cut(s) | 120 |
| Cfr10I | RCCGGY | 1 cut(s) | 616 |
| Csp6I | GTAC | 3 cut(s) | 253, 367, 716 |
| CspAI | ACCGGT | 1 cut(s) | 616 |
| CviAII | CATG | 5 cut(s) | 11, 121, 527, 543, 701 |
| CviJI | RGCY | 4 cut(s) | 9, 87, 143, 686 |
| CviKI_1 | RGCY | 4 cut(s) | 9, 87, 143, 686 |
| CviQI | GTAC | 3 cut(s) | 253, 367, 716 |
| DdeI | CTNAG | 4 cut(s) | 60, 294, 594, 687 |
| DpnI | GATC | 4 cut(s) | 65, 237, 519, 662 |
| DpnII | GATC | 4 cut(s) | 63, 235, 517, 660 |
| DraI | TTTAAA | 1 cut(s) | 463 |
| EaeI | YGGCCR | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 3 cut(s) | 10, 402, 700 |
| EcoT14I | CCWWGG | 3 cut(s) | 10, 402, 700 |
| ErhI | CCWWGG | 3 cut(s) | 10, 402, 700 |
| Esp3I | CGTCTC | 1 cut(s) | 156 |
| FaeI | CATG | 5 cut(s) | 14, 124, 530, 546, 704 |
| FaqI | GGGAC | 1 cut(s) | 439 |
| FatI | CATG | 5 cut(s) | 10, 120, 526, 542, 700 |
| FbaI | TGATCA | 2 cut(s) | 235, 660 |
| FokI | GGATG | 3 cut(s) | 27, 151, 667 |
| GsuI | CTGGAG | 1 cut(s) | 701 |
| HaeIII | GGCC | 1 cut(s) | 143 |
| HapII | CCGG | 1 cut(s) | 617 |
| Hin1II | CATG | 5 cut(s) | 14, 124, 530, 546, 704 |
| HinfI | GANTC | 1 cut(s) | 427 |
| HpaII | CCGG | 1 cut(s) | 617 |
| HphI | GGTGA | 3 cut(s) | 69, 203, 606 |
| Hpy166II | GTNNAC | 3 cut(s) | 77, 554, 614 |
| Hpy188I | TCNGA | 2 cut(s) | 61, 240 |
| Hpy188III | TCNNGA | 5 cut(s) | 121, 263, 484, 664, 680 |
| Hpy8I | GTNNAC | 3 cut(s) | 77, 554, 614 |
| Hpy99I | CGWCG | 1 cut(s) | 151 |
| HpyAV | CCTTC | 1 cut(s) | 376 |
| HpyCH4III | ACNGT | 3 cut(s) | 95, 560, 697 |
| HpyCH4IV | ACGT | 2 cut(s) | 146, 572 |
| HpyCH4V | TGCA | 3 cut(s) | 359, 494, 675 |
| HpyF3I | CTNAG | 4 cut(s) | 60, 294, 594, 687 |
| HpySE526I | ACGT | 2 cut(s) | 146, 572 |
| Hsp92II | CATG | 5 cut(s) | 14, 124, 530, 546, 704 |
| Ksp22I | TGATCA | 2 cut(s) | 235, 660 |
| Kzo9I | GATC | 4 cut(s) | 63, 235, 517, 660 |
| MaeII | ACGT | 2 cut(s) | 146, 572 |
| MaeIII | GTNAC | 2 cut(s) | 17, 691 |
| MalI | GATC | 4 cut(s) | 65, 237, 519, 662 |
| MboI | GATC | 4 cut(s) | 63, 235, 517, 660 |
| MboII | GAAGA | 1 cut(s) | 567 |
| MflI | RGATCY | 1 cut(s) | 63 |
| MlsI | TGGCCA | 1 cut(s) | 143 |
| MluCI | AATT | 3 cut(s) | 130, 408, 705 |
| MluNI | TGGCCA | 1 cut(s) | 143 |
| MlyI | GAGTC | 1 cut(s) | 421 |
| MnlI | CCTC | 6 cut(s) | 193, 289, 483, 589, 676, 682 |
| Mox20I | TGGCCA | 1 cut(s) | 143 |
| MscI | TGGCCA | 1 cut(s) | 143 |
| MseI | TTAA | 3 cut(s) | 344, 462, 626 |
| MslI | CAYNNNNRTG | 3 cut(s) | 15, 189, 281 |
| Msp20I | TGGCCA | 1 cut(s) | 143 |
| MspI | CCGG | 1 cut(s) | 617 |
| Mva1269I | GAATGC | 1 cut(s) | 675 |
| NcoI | CCATGG | 2 cut(s) | 10, 700 |
| NdeII | GATC | 4 cut(s) | 63, 235, 517, 660 |
| NlaIII | CATG | 5 cut(s) | 14, 124, 530, 546, 704 |
| NmuCI | GTSAC | 2 cut(s) | 17, 691 |
| NspI | RCATGY | 1 cut(s) | 530 |
| OliI | CACNNNNGTG | 2 cut(s) | 189, 281 |
| PaeI | GCATGC | 1 cut(s) | 530 |
| PagI | TCATGA | 1 cut(s) | 120 |
| PaqCI | CACCTGC | 1 cut(s) | 287 |
| PctI | GAATGC | 1 cut(s) | 675 |
| PflFI | GACNNNGTC | 1 cut(s) | 544 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 421 |
| PinAI | ACCGGT | 1 cut(s) | 616 |
| PleI | GAGTC | 1 cut(s) | 421 |
| PpsI | GAGTC | 1 cut(s) | 421 |
| PsuI | RGATCY | 1 cut(s) | 63 |
| PsyI | GACNNNGTC | 1 cut(s) | 544 |
| RsaI | GTAC | 3 cut(s) | 254, 368, 717 |
| RsaNI | GTAC | 3 cut(s) | 253, 367, 716 |
| RseI | CAYNNNNRTG | 3 cut(s) | 15, 189, 281 |
| SaqAI | TTAA | 3 cut(s) | 344, 462, 626 |
| Sau3AI | GATC | 4 cut(s) | 63, 235, 517, 660 |
| ScaI | AGTACT | 2 cut(s) | 254, 717 |
| SchI | GAGTC | 1 cut(s) | 421 |
| SetI | ASST | 9 cut(s) | 76, 149, 223, 281, 300, 378, 553, 575, 693 |
| SfcI | CTRYAG | 1 cut(s) | 719 |
| SgrAI | CRCCGGYG | 1 cut(s) | 616 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 15, 189, 281 |
| SphI | GCATGC | 1 cut(s) | 530 |
| Sse9I | AATT | 3 cut(s) | 130, 408, 705 |
| SsiI | CCGC | 1 cut(s) | 644 |
| SspI | AATATT | 1 cut(s) | 181 |
| StyI | CCWWGG | 3 cut(s) | 10, 402, 700 |
| TaaI | ACNGT | 3 cut(s) | 95, 560, 697 |
| TaiI | ACGT | 2 cut(s) | 149, 575 |
| TaqI | TCGA | 1 cut(s) | 520 |
| TasI | AATT | 3 cut(s) | 130, 408, 705 |
| TatI | WGTACW | 3 cut(s) | 252, 366, 715 |
| Tru1I | TTAA | 3 cut(s) | 344, 462, 626 |
| Tru9I | TTAA | 3 cut(s) | 344, 462, 626 |
| TscAI | CASTG | 4 cut(s) | 563, 571, 643, 700 |
| TseFI | GTSAC | 2 cut(s) | 17, 691 |
| Tsp45I | GTSAC | 2 cut(s) | 17, 691 |
| TspDTI | ATGAA | 3 cut(s) | 105, 109, 589 |
| TspGWI | ACGGA | 1 cut(s) | 432 |
| TspRI | CASTG | 4 cut(s) | 563, 571, 643, 700 |
| Tth111I | GACNNNGTC | 1 cut(s) | 544 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 421 |
| XapI | RAATTY | 1 cut(s) | 130 |
| XceI | RCATGY | 1 cut(s) | 530 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 707 |
| ZrmI | AGTACT | 2 cut(s) | 254, 717 |