Ubiquitin carboxyl-terminal hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 161 |
| AclWI | GGATC | 2 cut(s) | 356, 746 |
| AcsI | RAATTY | 1 cut(s) | 182 |
| AcuI | CTGAAG | 2 cut(s) | 141, 281 |
| AfaI | GTAC | 3 cut(s) | 631, 721, 868 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 479, 715, 716 |
| AgsI | TTSAA | 4 cut(s) | 37, 188, 383, 919 |
| AhlI | ACTAGT | 1 cut(s) | 211 |
| AjnI | CCWGG | 2 cut(s) | 372, 709 |
| AluBI | AGCT | 5 cut(s) | 191, 287, 445, 515, 545 |
| AluI | AGCT | 5 cut(s) | 191, 287, 445, 515, 545 |
| Alw21I | GWGCWC | 1 cut(s) | 219 |
| AlwI | GGATC | 2 cut(s) | 356, 746 |
| AoxI | GGCC | 1 cut(s) | 890 |
| ApeKI | GCWGC | 1 cut(s) | 639 |
| ApoI | RAATTY | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 2 cut(s) | 93, 955 |
| AsuII | TTCGAA | 1 cut(s) | 620 |
| BbsI | GAAGAC | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 219 |
| BbvCI | CCTCAGC | 1 cut(s) | 516 |
| BbvI | GCAGC | 1 cut(s) | 626 |
| BciT130I | CCWGG | 2 cut(s) | 374, 711 |
| BciVI | GTATCC | 2 cut(s) | 191, 943 |
| BcuI | ACTAGT | 1 cut(s) | 211 |
| BfaI | CTAG | 1 cut(s) | 212 |
| BfmI | CTRYAG | 1 cut(s) | 1001 |
| BfuI | GTATCC | 2 cut(s) | 191, 943 |
| BisI | GCNGC | 1 cut(s) | 640 |
| BlsI | GCNGC | 1 cut(s) | 641 |
| Bme1390I | CCNGG | 2 cut(s) | 374, 711 |
| BmiI | GGNNCC | 1 cut(s) | 772 |
| BmrFI | CCNGG | 2 cut(s) | 374, 711 |
| BmsI | GCATC | 3 cut(s) | 376, 411, 568 |
| BpiI | GAAGAC | 1 cut(s) | 258 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 548, 580 |
| BpmI | CTGGAG | 2 cut(s) | 213, 684 |
| Bpu10I | CCTNAGC | 2 cut(s) | 516, 797 |
| Bpu14I | TTCGAA | 1 cut(s) | 620 |
| Bsa29I | ATCGAT | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 3 cut(s) | 48, 696, 709 |
| BsaWI | WCCGGW | 1 cut(s) | 129 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 504, 534 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 479, 715, 716 |
| Bse1I | ACTGG | 2 cut(s) | 307, 863 |
| Bse3DI | GCAATG | 1 cut(s) | 937 |
| BseBI | CCWGG | 2 cut(s) | 374, 711 |
| BseCI | ATCGAT | 1 cut(s) | 351 |
| BseDI | CCNNGG | 3 cut(s) | 48, 696, 709 |
| BseGI | GGATG | 2 cut(s) | 583, 754 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 479, 715, 716 |
| BseMI | GCAATG | 1 cut(s) | 937 |
| BseMII | CTCAG | 3 cut(s) | 507, 624, 788 |
| BseNI | ACTGG | 2 cut(s) | 307, 863 |
| BseXI | GCAGC | 1 cut(s) | 626 |
| BsgI | GTGCAG | 1 cut(s) | 981 |
| Bsh1285I | CGRYCG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 892 |
| BshVI | ATCGAT | 1 cut(s) | 351 |
| BsiEI | CGRYCG | 1 cut(s) | 134 |
| BsiHKAI | GWGCWC | 1 cut(s) | 219 |
| BsiSI | CCGG | 1 cut(s) | 130 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 479, 715, 716 |
| BsnI | GGCC | 1 cut(s) | 892 |
| Bsp119I | TTCGAA | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 1 cut(s) | 219 |
| Bsp143I | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| Bsp19I | CCATGG | 1 cut(s) | 48 |
| BspACI | CCGC | 1 cut(s) | 161 |
| BspANI | GGCC | 1 cut(s) | 892 |
| BspCNI | CTCAG | 3 cut(s) | 508, 625, 789 |
| BspDI | ATCGAT | 1 cut(s) | 351 |
| BspLI | GGNNCC | 1 cut(s) | 772 |
| BspPI | GGATC | 2 cut(s) | 356, 746 |
| BspQI | GCTCTTC | 1 cut(s) | 535 |
| BspT104I | TTCGAA | 1 cut(s) | 620 |
| BsrDI | GCAATG | 1 cut(s) | 937 |
| BsrI | ACTGG | 2 cut(s) | 307, 863 |
| BssECI | CCNNGG | 3 cut(s) | 48, 696, 709 |
| BssMI | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| BssT1I | CCWWGG | 2 cut(s) | 48, 696 |
| Bst2UI | CCWGG | 2 cut(s) | 374, 711 |
| Bst4CI | ACNGT | 2 cut(s) | 979, 1002 |
| Bst6I | CTCTTC | 2 cut(s) | 68, 535 |
| BstBI | TTCGAA | 1 cut(s) | 620 |
| BstC8I | GCNNGC | 5 cut(s) | 547, 593, 819, 890, 928 |
| BstDEI | CTNAG | 4 cut(s) | 516, 633, 797, 894 |
| BstDSI | CCRYGG | 1 cut(s) | 48 |
| BstF5I | GGATG | 2 cut(s) | 583, 754 |
| BstKTI | GATC | 5 cut(s) | 351, 355, 573, 754, 811 |
| BstMBI | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| BstMCI | CGRYCG | 1 cut(s) | 134 |
| BstNI | CCWGG | 2 cut(s) | 374, 711 |
| BstNSI | RCATGY | 3 cut(s) | 370, 599, 821 |
| BstSCI | CCNGG | 2 cut(s) | 372, 709 |
| BstSFI | CTRYAG | 1 cut(s) | 1001 |
| BstV1I | GCAGC | 1 cut(s) | 626 |
| BstV2I | GAAGAC | 1 cut(s) | 258 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 74 |
| Bsu15I | ATCGAT | 1 cut(s) | 351 |
| BsuI | GTATCC | 2 cut(s) | 191, 943 |
| BsuRI | GGCC | 1 cut(s) | 892 |
| BsuTUI | ATCGAT | 1 cut(s) | 351 |
| BtgI | CCRYGG | 1 cut(s) | 48 |
| BtgZI | GCGATG | 1 cut(s) | 431 |
| BtsCI | GGATG | 2 cut(s) | 583, 754 |
| BtsI | GCAGTG | 2 cut(s) | 657, 792 |
| BtsIMutI | CAGTG | 5 cut(s) | 147, 657, 792, 975, 998 |
| Cac8I | GCNNGC | 5 cut(s) | 547, 593, 819, 890, 928 |
| ClaI | ATCGAT | 1 cut(s) | 351 |
| Csp6I | GTAC | 3 cut(s) | 630, 720, 867 |
| CviAII | CATG | 6 cut(s) | 49, 367, 413, 596, 818, 983 |
| CviJI | RGCY | 8 cut(s) | 53, 191, 287, 445, 515, 545, 888, 892 |
| CviKI_1 | RGCY | 8 cut(s) | 53, 191, 287, 445, 515, 545, 888, 892 |
| CviQI | GTAC | 3 cut(s) | 630, 720, 867 |
| DdeI | CTNAG | 4 cut(s) | 516, 633, 797, 894 |
| DpnI | GATC | 5 cut(s) | 350, 354, 572, 753, 810 |
| DpnII | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| Eam1104I | CTCTTC | 2 cut(s) | 68, 535 |
| EarI | CTCTTC | 2 cut(s) | 68, 535 |
| Eco130I | CCWWGG | 2 cut(s) | 48, 696 |
| Eco57I | CTGAAG | 2 cut(s) | 141, 281 |
| EcoRII | CCWGG | 2 cut(s) | 372, 709 |
| EcoT14I | CCWWGG | 2 cut(s) | 48, 696 |
| EcoT22I | ATGCAT | 1 cut(s) | 819 |
| ErhI | CCWWGG | 2 cut(s) | 48, 696 |
| FaeI | CATG | 6 cut(s) | 52, 370, 416, 599, 821, 986 |
| FatI | CATG | 6 cut(s) | 48, 366, 412, 595, 817, 982 |
| Fnu4HI | GCNGC | 1 cut(s) | 640 |
| FokI | GGATG | 2 cut(s) | 590, 761 |
| Fsp4HI | GCNGC | 1 cut(s) | 640 |
| FspBI | CTAG | 1 cut(s) | 212 |
| GluI | GCNGC | 1 cut(s) | 640 |
| GsuI | CTGGAG | 2 cut(s) | 213, 684 |
| HaeIII | GGCC | 1 cut(s) | 892 |
| HapII | CCGG | 1 cut(s) | 130 |
| Hin1II | CATG | 6 cut(s) | 52, 370, 416, 599, 821, 986 |
| HincII | GTYRAC | 1 cut(s) | 27 |
| HindII | GTYRAC | 1 cut(s) | 27 |
| HindIII | AAGCTT | 1 cut(s) | 443 |
| HinfI | GANTC | 5 cut(s) | 98, 173, 290, 557, 919 |
| HpaI | GTTAAC | 1 cut(s) | 27 |
| HpaII | CCGG | 1 cut(s) | 130 |
| HphI | GGTGA | 2 cut(s) | 93, 955 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 268 |
| Hpy188I | TCNGA | 5 cut(s) | 97, 300, 649, 756, 879 |
| Hpy188III | TCNNGA | 4 cut(s) | 177, 383, 432, 565 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 268 |
| HpyAV | CCTTC | 3 cut(s) | 483, 598, 940 |
| HpyCH4III | ACNGT | 2 cut(s) | 979, 1002 |
| HpyCH4IV | ACGT | 1 cut(s) | 763 |
| HpyCH4V | TGCA | 7 cut(s) | 340, 591, 642, 785, 817, 957, 998 |
| HpyF3I | CTNAG | 4 cut(s) | 516, 633, 797, 894 |
| HpySE526I | ACGT | 1 cut(s) | 763 |
| Hsp92II | CATG | 6 cut(s) | 52, 370, 416, 599, 821, 986 |
| KspAI | GTTAAC | 1 cut(s) | 27 |
| Kzo9I | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| LguI | GCTCTTC | 1 cut(s) | 535 |
| LmnI | GCTCC | 2 cut(s) | 284, 512 |
| Lsp1109I | GCAGC | 1 cut(s) | 626 |
| LweI | GCATC | 3 cut(s) | 376, 411, 568 |
| MaeI | CTAG | 1 cut(s) | 212 |
| MaeII | ACGT | 1 cut(s) | 763 |
| MaeIII | GTNAC | 3 cut(s) | 851, 973, 991 |
| MalI | GATC | 5 cut(s) | 350, 354, 572, 753, 810 |
| MboI | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| MboII | GAAGA | 7 cut(s) | 55, 250, 263, 371, 552, 580, 691 |
| MhlI | GDGCHC | 1 cut(s) | 219 |
| MluCI | AATT | 7 cut(s) | 19, 31, 37, 182, 499, 743, 987 |
| MlyI | GAGTC | 2 cut(s) | 182, 566 |
| MmeI | TCCRAC | 4 cut(s) | 91, 131, 262, 501 |
| MnlI | CCTC | 6 cut(s) | 114, 188, 339, 511, 880, 964 |
| Mph1103I | ATGCAT | 1 cut(s) | 819 |
| MseI | TTAA | 2 cut(s) | 26, 585 |
| MspA1I | CMGCKG | 1 cut(s) | 161 |
| MspI | CCGG | 1 cut(s) | 130 |
| MspR9I | CCNGG | 2 cut(s) | 374, 711 |
| MvaI | CCWGG | 2 cut(s) | 374, 711 |
| NcoI | CCATGG | 1 cut(s) | 48 |
| NdeII | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| NlaIII | CATG | 6 cut(s) | 52, 370, 416, 599, 821, 986 |
| NlaIV | GGNNCC | 1 cut(s) | 772 |
| NmuCI | GTSAC | 2 cut(s) | 851, 973 |
| NsiI | ATGCAT | 1 cut(s) | 819 |
| NspI | RCATGY | 3 cut(s) | 370, 599, 821 |
| NspV | TTCGAA | 1 cut(s) | 620 |
| PaeI | GCATGC | 1 cut(s) | 821 |
| PciSI | GCTCTTC | 1 cut(s) | 535 |
| PfeI | GAWTC | 3 cut(s) | 98, 290, 919 |
| PkrI | GCNGC | 1 cut(s) | 641 |
| PleI | GAGTC | 2 cut(s) | 181, 565 |
| PpsI | GAGTC | 2 cut(s) | 181, 565 |
| Psp6I | CCWGG | 2 cut(s) | 372, 709 |
| PspGI | CCWGG | 2 cut(s) | 372, 709 |
| PspN4I | GGNNCC | 1 cut(s) | 772 |
| RsaI | GTAC | 3 cut(s) | 631, 721, 868 |
| RsaNI | GTAC | 3 cut(s) | 630, 720, 867 |
| SapI | GCTCTTC | 1 cut(s) | 535 |
| SaqAI | TTAA | 2 cut(s) | 26, 585 |
| SatI | GCNGC | 1 cut(s) | 640 |
| Sau3AI | GATC | 5 cut(s) | 348, 352, 570, 751, 808 |
| SchI | GAGTC | 2 cut(s) | 182, 566 |
| ScrFI | CCNGG | 2 cut(s) | 374, 711 |
| SduI | GDGCHC | 1 cut(s) | 219 |
| SfaNI | GCATC | 3 cut(s) | 376, 411, 568 |
| SfcI | CTRYAG | 1 cut(s) | 1001 |
| SfuI | TTCGAA | 1 cut(s) | 620 |
| SpeI | ACTAGT | 1 cut(s) | 211 |
| SphI | GCATGC | 1 cut(s) | 821 |
| Sse9I | AATT | 7 cut(s) | 19, 31, 37, 182, 499, 743, 987 |
| SsiI | CCGC | 1 cut(s) | 161 |
| SspMI | CTAG | 1 cut(s) | 212 |
| StyD4I | CCNGG | 2 cut(s) | 372, 709 |
| StyI | CCWWGG | 2 cut(s) | 48, 696 |
| TaaI | ACNGT | 2 cut(s) | 979, 1002 |
| TaiI | ACGT | 1 cut(s) | 766 |
| TaqI | TCGA | 4 cut(s) | 83, 351, 566, 620 |
| TasI | AATT | 7 cut(s) | 19, 31, 37, 182, 499, 743, 987 |
| TfiI | GAWTC | 3 cut(s) | 98, 290, 919 |
| Tru1I | TTAA | 2 cut(s) | 26, 585 |
| Tru9I | TTAA | 2 cut(s) | 26, 585 |
| TscAI | CASTG | 5 cut(s) | 147, 664, 792, 982, 1005 |
| TseFI | GTSAC | 2 cut(s) | 851, 973 |
| TseI | GCWGC | 1 cut(s) | 639 |
| Tsp45I | GTSAC | 2 cut(s) | 851, 973 |
| TspDTI | ATGAA | 3 cut(s) | 324, 889, 971 |
| TspGWI | ACGGA | 3 cut(s) | 358, 495, 685 |
| TspRI | CASTG | 5 cut(s) | 147, 664, 792, 982, 1005 |
| XapI | RAATTY | 1 cut(s) | 182 |
| XceI | RCATGY | 3 cut(s) | 370, 599, 821 |
| XspI | CTAG | 1 cut(s) | 212 |
| Zsp2I | ATGCAT | 1 cut(s) | 819 |