Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

50563716 .. 50568447

Gene Structure 4732 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00368870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGAATTTGCAACCTGTATCAGTTCTTCTACAAAGCTGCAAGCCTCCAATGACGTACGGCTCGCCTTTTATGCCTAGGTCATTGTCTCAATTGCAACCCTTAAATAAGCACACGCTCACCATGACGTTGCCGGCGGCCTCCGAACTCTCTCCACTCAAATTGAGTCTTCAGTACTCGCATCTGTCACCAGTTCCTGCTCGGCACATAGCTCCTGTTAGCGCAGCCAGGTTGCCATTGCAATGGAGCTGCTTGGAATCACTTGTCCCAGTACTCAGCGCAGCAGCTTGGGCAGTCCAGCTGATATCGAGCTTGCTCATGTTCTTTAGGGAGTCTCATAGCCCTAGATTATTAGACCAAAGACAAAGTAGCGGCTTAGTTCCGCAAGAGGTAGGGATGTGCAAACCATTTCTAGATGCTACTCCAACTCATTACACCTTAAAAATAGAGTTATTTTCAAGGCTAAAAAATTTTTGTGAAGACGATCCATATGAATCAAGAGAGTTTGAAGCTGGAGGATACAAATGGAAACTGGTACTCTACCCAGATGGAAACAAGAGAAGAAATGTGGAAGGTCACATCTCTCTCTACTTGGAAATAGCTGGAACAAATTTATTTCAGCCTGGTTGGGAGGTACATGTTGATTTTAGATTGTTCTTGCTTGATCACCATAAAAGAGTCTACTTGGTTTTTGAAGGTAATATCTGCTTCCGTGTAACTGAATTCTCATCCAGCACGAATGTGAACCGCTTATATACTTTTTTCATATGTATGCAAAGACCATTGCTTATTTTCTTATTTTTGATTTTGGTGATGCTTTTTATAGATGCTTCTACACAGAAAATGTGCTTCAATGGGGATATGCCTTGTGCGGCTGGTTTTGATAAGCTTATCAGTGTTAAAGATTTTACTGATGACTCCAACGGATATCTAGTTGATGACACGTGCGTGTTTGGTGCTGAGGTCTTTGTCTGTAAAGAAAGGAGAACAGGCAAAGGAGAGTGTCTATCAAGGATCCAGAATCCTTTAACGTACAAGTATGTTTGGAAAATTGATAATTTTTTAAAGACAGATGCCGTATGCCATTGTTCAGAAGCATTCAGTGCTGGAAATCAGAAATGGAAGATAGAACTCTATCCCAAGGGAATTAATAAAGGAAAGGGTAGTCATGTTTCTCTGTTTTTTAAACTGGCTAATCCGACTCTTCCTCCTGGCTCTAAAATATATGCAGACTATACACTACGCATCCAAGATCAAATTCATTTCAAGCATGATCATGGAAGAGGTGAAAAAAGCGGGCCAATTTATGTGGCAATGTTGAGACATGCACATGTTTGCCCTAAGGCCCCAACAAGCAGGCCCGATCCAACTCACCCCCACCAGCGACCACTAATCCCAGCTCCAGCAACGACCTCCATTGCCACCAATCCAGAGCCACAAGTCTCCCCCGACGACACCACCCAAAGACACAGCACTTGCGTGCCCCGACGACCCTATTCACGAATCGCACAACACCCGAAGCTGCTTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

509

Amino Acids

57.68

Weight (kDa)

9.02

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	143 - 224	3.9e-20	MATH domain
MATH	PF00917	151 - 226	2.2e-06	MATH domain
MATH_2	PF22486	278 - 321	2.3e-06	MATH domain
MATH_2	PF22486	345 - 423	2.2e-17	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	678
AciI	CCGC	6 cut(s)	134, 369, 380, 745, 869, 1293
AclWI	GGATC	4 cut(s)	476, 1006, 1019, 1355
AcsI	RAATTY	5 cut(s)	4, 466, 607, 719, 1254
AcuI	CTGAAG	1 cut(s)	152
AcvI	CACGTG	1 cut(s)	942
AfaI	GTAC	6 cut(s)	56, 173, 270, 534, 633, 1031
AflIII	ACRYGT	3 cut(s)	634, 939, 1327
AgsI	TTSAA	5 cut(s)	456, 506, 692, 850, 1264
AjnI	CCWGG	3 cut(s)	224, 619, 1207
AjuI	GAANNNNNNNTTGG	2 cut(s)	1239, 1271
AleI	CACNNNNGTG	3 cut(s)	737, 944, 1475
Alw26I	GTCTC	4 cut(s)	90, 336, 1312, 1444
AlwI	GGATC	4 cut(s)	476, 1006, 1019, 1355
AlwNI	CAGNNNCTG	1 cut(s)	194
AoxI	GGCC	4 cut(s)	135, 1295, 1341, 1355
ApeKI	GCWGC	6 cut(s)	36, 221, 246, 278, 281, 1519
ApoI	RAATTY	5 cut(s)	4, 466, 607, 719, 1254
AseI	ATTAAT	1 cut(s)	1146
AspA2I	CCTAGG	1 cut(s)	74
AspLEI	GCGC	2 cut(s)	221, 278
AspS9I	GGNCC	3 cut(s)	1295, 1342, 1356
AsuHPI	GGTGA	6 cut(s)	109, 177, 656, 820, 1295, 1361
AvrII	CCTAGG	1 cut(s)	74
AxyI	CCTNAGG	1 cut(s)	1338
BaeGI	GKGCMC	1 cut(s)	1482
BamHI	GGATCC	1 cut(s)	1011
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbrPI	CACGTG	1 cut(s)	942
BbsI	GAAGAC	2 cut(s)	158, 483
BbvCI	CCTCAGC	1 cut(s)	957
BbvI	GCAGC	6 cut(s)	23, 233, 233, 290, 293, 1506
BccI	CCATC	1 cut(s)	539
BceAI	ACGGC	2 cut(s)	73, 1058
BciT130I	CCWGG	3 cut(s)	226, 621, 1209
BciVI	GTATCC	1 cut(s)	509
BclI	TGATCA	2 cut(s)	661, 1270
BcoDI	GTCTC	4 cut(s)	90, 336, 1312, 1444
BfaI	CTAG	4 cut(s)	75, 342, 410, 929
BfuI	GTATCC	1 cut(s)	509
BisI	GCNGC	9 cut(s)	37, 135, 222, 247, 279, 282, 370, 870, 1520
BlnI	CCTAGG	1 cut(s)	74
BlsI	GCNGC	9 cut(s)	38, 136, 223, 248, 280, 283, 371, 871, 1521
BmcAI	AGTACT	2 cut(s)	173, 270
Bme1390I	CCNGG	3 cut(s)	226, 621, 1209
BmgT120I	GGNCC	3 cut(s)	1295, 1342, 1356
BmiI	GGNNCC	2 cut(s)	1013, 1344
BmrFI	CCNGG	3 cut(s)	226, 621, 1209
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	6 cut(s)	187, 403, 801, 814, 1060, 1251
BmuI	ACTGGG	1 cut(s)	260
BpiI	GAAGAC	2 cut(s)	158, 483
BpmI	CTGGAG	2 cut(s)	531, 1383
Bpu10I	CCTNAGC	1 cut(s)	957
BsaAI	YACGTR	1 cut(s)	942
BsaJI	CCNNGG	2 cut(s)	74, 1137
BsaXI	ACNNNNNCTCC	2 cut(s)	1189, 1219
Bse118I	RCCGGY	1 cut(s)	130
Bse1I	ACTGG	4 cut(s)	188, 266, 534, 1191
Bse21I	CCTNAGG	1 cut(s)	1338
Bse3DI	GCAATG	5 cut(s)	233, 245, 779, 1317, 1413
BseBI	CCWGG	3 cut(s)	226, 621, 1209
BseDI	CCNNGG	2 cut(s)	74, 1137
BseGI	GGATG	3 cut(s)	399, 725, 1242
BseMI	GCAATG	5 cut(s)	233, 245, 779, 1317, 1413
BseMII	CTCAG	2 cut(s)	286, 948
BseNI	ACTGG	4 cut(s)	188, 266, 534, 1191
BseSI	GKGCMC	1 cut(s)	1482
BseXI	GCAGC	6 cut(s)	23, 233, 233, 290, 293, 1506
BseYI	CCCAGC	1 cut(s)	1393
BshFI	GGCC	4 cut(s)	137, 1297, 1343, 1357
BsiSI	CCGG	1 cut(s)	131
BsiWI	CGTACG	1 cut(s)	54
BslFI	GGGAC	1 cut(s)	248
BsmAI	GTCTC	4 cut(s)	90, 336, 1312, 1444
BsmFI	GGGAC	1 cut(s)	248
BsmI	GAATGC	1 cut(s)	1094
BsnI	GGCC	4 cut(s)	137, 1297, 1343, 1357
Bsp1286I	GDGCHC	1 cut(s)	1482
Bsp143I	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
BspACI	CCGC	6 cut(s)	134, 369, 380, 745, 869, 1293
BspANI	GGCC	4 cut(s)	137, 1297, 1343, 1357
BspCNI	CTCAG	2 cut(s)	285, 949
BspLI	GGNNCC	2 cut(s)	1013, 1344
BspPI	GGATC	4 cut(s)	476, 1006, 1019, 1355
BsrDI	GCAATG	5 cut(s)	233, 245, 779, 1317, 1413
BsrFI	RCCGGY	1 cut(s)	130
BsrI	ACTGG	4 cut(s)	188, 266, 534, 1191
BssAI	RCCGGY	1 cut(s)	130
BssECI	CCNNGG	2 cut(s)	74, 1137
BssMI	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
BssT1I	CCWWGG	2 cut(s)	74, 1137
Bst2UI	CCWGG	3 cut(s)	226, 621, 1209
Bst6I	CTCTTC	2 cut(s)	1206, 1273
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBAI	YACGTR	1 cut(s)	942
BstC8I	GCNNGC	7 cut(s)	41, 62, 132, 311, 1295, 1355, 1478
BstDEI	CTNAG	4 cut(s)	272, 373, 957, 1338
BstF5I	GGATG	3 cut(s)	399, 725, 1242
BstHHI	GCGC	2 cut(s)	221, 278
BstKTI	GATC	6 cut(s)	484, 664, 1014, 1252, 1273, 1363
BstMAI	GTCTC	4 cut(s)	90, 336, 1312, 1444
BstMBI	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
BstMWI	GCNNNNNNNGC	3 cut(s)	70, 287, 1100
BstNI	CCWGG	3 cut(s)	226, 621, 1209
BstNSI	RCATGY	3 cut(s)	638, 1325, 1331
BstSCI	CCNGG	3 cut(s)	224, 619, 1207
BstSLI	GKGCMC	1 cut(s)	1482
BstV1I	GCAGC	6 cut(s)	23, 233, 233, 290, 293, 1506
BstV2I	GAAGAC	2 cut(s)	158, 483
BstX2I	RGATCY	1 cut(s)	1011
BstXI	CCANNNNNNTGG	1 cut(s)	240
BstYI	RGATCY	1 cut(s)	1011
Bsu36I	CCTNAGG	1 cut(s)	1338
BsuI	GTATCC	1 cut(s)	509
BsuRI	GGCC	4 cut(s)	137, 1297, 1343, 1357
BtsCI	GGATG	3 cut(s)	399, 725, 1242
BtsIMutI	CAGTG	2 cut(s)	898, 1105
Cac8I	GCNNGC	7 cut(s)	41, 62, 132, 311, 1295, 1355, 1478
CaiI	CAGNNNCTG	1 cut(s)	194
CfoI	GCGC	2 cut(s)	221, 278
Cfr10I	RCCGGY	1 cut(s)	130
Cfr13I	GGNCC	3 cut(s)	1295, 1342, 1356
Csp6I	GTAC	6 cut(s)	55, 172, 269, 533, 632, 1030
CspCI	CAANNNNNGTGG	4 cut(s)	141, 176, 1287, 1322
CviAII	CATG	8 cut(s)	121, 316, 635, 1166, 1268, 1274, 1322, 1328
CviQI	GTAC	6 cut(s)	55, 172, 269, 533, 632, 1030
DdeI	CTNAG	4 cut(s)	272, 373, 957, 1338
DpnI	GATC	6 cut(s)	483, 663, 1013, 1251, 1272, 1362
DpnII	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
DraI	TTTAAA	2 cut(s)	1062, 1183
Eam1104I	CTCTTC	2 cut(s)	1206, 1273
EarI	CTCTTC	2 cut(s)	1206, 1273
Eco130I	CCWWGG	2 cut(s)	74, 1137
Eco32I	GATATC	2 cut(s)	303, 926
Eco57I	CTGAAG	1 cut(s)	152
Eco72I	CACGTG	1 cut(s)	942
Eco81I	CCTNAGG	1 cut(s)	1338
EcoO109I	RGGNCCY	1 cut(s)	1342
EcoRI	GAATTC	1 cut(s)	719
EcoRII	CCWGG	3 cut(s)	224, 619, 1207
EcoRV	GATATC	2 cut(s)	303, 926
EcoT14I	CCWWGG	2 cut(s)	74, 1137
ErhI	CCWWGG	2 cut(s)	74, 1137
FaeI	CATG	8 cut(s)	124, 319, 638, 1169, 1271, 1277, 1325, 1331
FaqI	GGGAC	1 cut(s)	248
FatI	CATG	8 cut(s)	120, 315, 634, 1165, 1267, 1273, 1321, 1327
FauI	CCCGC	1 cut(s)	1286
FauNDI	CATATG	2 cut(s)	487, 764
FbaI	TGATCA	2 cut(s)	661, 1270
FblI	GTMKAC	1 cut(s)	678
Fnu4HI	GCNGC	9 cut(s)	37, 135, 222, 247, 279, 282, 370, 870, 1520
FokI	GGATG	3 cut(s)	406, 712, 1229
Fsp4HI	GCNGC	9 cut(s)	37, 135, 222, 247, 279, 282, 370, 870, 1520
FspBI	CTAG	4 cut(s)	75, 342, 410, 929
GlaI	GCGC	2 cut(s)	220, 277
GluI	GCNGC	9 cut(s)	37, 135, 222, 247, 279, 282, 370, 870, 1520
GsaI	CCCAGC	1 cut(s)	1397
GsuI	CTGGAG	2 cut(s)	531, 1383
HaeIII	GGCC	4 cut(s)	137, 1297, 1343, 1357
HapII	CCGG	1 cut(s)	131
HhaI	GCGC	2 cut(s)	221, 278
Hin1II	CATG	8 cut(s)	124, 319, 638, 1169, 1271, 1277, 1325, 1331
Hin6I	GCGC	2 cut(s)	219, 276
HinP1I	GCGC	2 cut(s)	219, 276
HindIII	AAGCTT	1 cut(s)	884
HinfI	GANTC	9 cut(s)	163, 254, 329, 491, 675, 914, 1018, 1198, 1500
HpaII	CCGG	1 cut(s)	131
HphI	GGTGA	6 cut(s)	109, 177, 656, 820, 1295, 1361
Hpy166II	GTNNAC	2 cut(s)	679, 742
Hpy188I	TCNGA	4 cut(s)	142, 1090, 1113, 1197
Hpy188III	TCNNGA	5 cut(s)	410, 495, 1015, 1427, 1497
Hpy8I	GTNNAC	2 cut(s)	679, 742
Hpy99I	CGWCG	2 cut(s)	1451, 1488
HpyAV	CCTTC	2 cut(s)	563, 686
HpyCH4IV	ACGT	4 cut(s)	53, 125, 941, 1028
HpyCH4V	TGCA	8 cut(s)	10, 39, 94, 238, 399, 772, 1226, 1325
HpyF10VI	GCNNNNNNNGC	3 cut(s)	70, 287, 1100
HpyF3I	CTNAG	4 cut(s)	272, 373, 957, 1338
HpySE526I	ACGT	4 cut(s)	53, 125, 941, 1028
Hsp92II	CATG	8 cut(s)	124, 319, 638, 1169, 1271, 1277, 1325, 1331
HspAI	GCGC	2 cut(s)	219, 276
KroI	GCCGGC	1 cut(s)	130
KroNI	GCCGGC	1 cut(s)	132
Ksp22I	TGATCA	2 cut(s)	661, 1270
Kzo9I	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
LmnI	GCTCC	3 cut(s)	214, 243, 1402
Lsp1109I	GCAGC	6 cut(s)	23, 233, 233, 290, 293, 1506
LweI	GCATC	6 cut(s)	187, 403, 801, 814, 1060, 1251
MaeI	CTAG	4 cut(s)	75, 342, 410, 929
MaeII	ACGT	4 cut(s)	53, 125, 941, 1028
MaeIII	GTNAC	3 cut(s)	183, 572, 712
MalI	GATC	6 cut(s)	483, 663, 1013, 1251, 1272, 1362
MboI	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
MboII	GAAGA	7 cut(s)	17, 158, 488, 570, 1132, 1193, 1290
MfeI	CAATTG	1 cut(s)	89
MflI	RGATCY	1 cut(s)	1011
MhlI	GDGCHC	1 cut(s)	1482
MlyI	GAGTC	5 cut(s)	172, 338, 684, 908, 1192
MmeI	TCCRAC	4 cut(s)	446, 942, 1220, 1388
MnlI	CCTC	9 cut(s)	54, 148, 379, 506, 622, 952, 1215, 1274, 1420
MroNI	GCCGGC	1 cut(s)	130
MseI	TTAA	7 cut(s)	101, 437, 897, 1025, 1061, 1146, 1182
MslI	CAYNNNNRTG	7 cut(s)	238, 737, 767, 944, 1272, 1326, 1475
MspA1I	CMGCKG	1 cut(s)	298
MspI	CCGG	1 cut(s)	131
MspR9I	CCNGG	3 cut(s)	226, 621, 1209
MunI	CAATTG	1 cut(s)	89
Mva1269I	GAATGC	1 cut(s)	1094
MvaI	CCWGG	3 cut(s)	226, 621, 1209
MwoI	GCNNNNNNNGC	3 cut(s)	70, 287, 1100
NaeI	GCCGGC	1 cut(s)	132
NdeI	CATATG	2 cut(s)	487, 764
NdeII	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
NgoMIV	GCCGGC	1 cut(s)	130
NlaIII	CATG	8 cut(s)	124, 319, 638, 1169, 1271, 1277, 1325, 1331
NlaIV	GGNNCC	2 cut(s)	1013, 1344
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	2 cut(s)	183, 572
NspI	RCATGY	3 cut(s)	638, 1325, 1331
OliI	CACNNNNGTG	3 cut(s)	737, 944, 1475
PciI	ACATGT	2 cut(s)	634, 1327
PctI	GAATGC	1 cut(s)	1094
PdiI	GCCGGC	1 cut(s)	132
PfeI	GAWTC	4 cut(s)	254, 491, 1018, 1500
Pfl23II	CGTACG	1 cut(s)	54
PkrI	GCNGC	9 cut(s)	38, 136, 223, 248, 280, 283, 371, 871, 1521
PleI	GAGTC	5 cut(s)	171, 337, 683, 908, 1192
PmaCI	CACGTG	1 cut(s)	942
PmlI	CACGTG	1 cut(s)	942
PpsI	GAGTC	5 cut(s)	171, 337, 683, 908, 1192
Ppu21I	YACGTR	1 cut(s)	942
PscI	ACATGT	2 cut(s)	634, 1327
PshBI	ATTAAT	1 cut(s)	1146
Psp6I	CCWGG	3 cut(s)	224, 619, 1207
PspCI	CACGTG	1 cut(s)	942
PspFI	CCCAGC	1 cut(s)	1393
PspGI	CCWGG	3 cut(s)	224, 619, 1207
PspLI	CGTACG	1 cut(s)	54
PspN4I	GGNNCC	2 cut(s)	1013, 1344
PspPI	GGNCC	3 cut(s)	1295, 1342, 1356
PstNI	CAGNNNCTG	1 cut(s)	194
PsuI	RGATCY	1 cut(s)	1011
PvuII	CAGCTG	1 cut(s)	298
RsaI	GTAC	6 cut(s)	56, 173, 270, 534, 633, 1031
RsaNI	GTAC	6 cut(s)	55, 172, 269, 533, 632, 1030
RseI	CAYNNNNRTG	7 cut(s)	238, 737, 767, 944, 1272, 1326, 1475
SaqAI	TTAA	7 cut(s)	101, 437, 897, 1025, 1061, 1146, 1182
SatI	GCNGC	9 cut(s)	37, 135, 222, 247, 279, 282, 370, 870, 1520
Sau3AI	GATC	6 cut(s)	481, 661, 1011, 1249, 1270, 1360
Sau96I	GGNCC	3 cut(s)	1295, 1342, 1356
ScaI	AGTACT	2 cut(s)	173, 270
SchI	GAGTC	5 cut(s)	172, 338, 684, 908, 1192
ScrFI	CCNGG	3 cut(s)	226, 621, 1209
SduI	GDGCHC	1 cut(s)	1482
SfaNI	GCATC	6 cut(s)	187, 403, 801, 814, 1060, 1251
SmiMI	CAYNNNNRTG	7 cut(s)	238, 737, 767, 944, 1272, 1326, 1475
SsiI	CCGC	6 cut(s)	134, 369, 380, 745, 869, 1293
SspMI	CTAG	4 cut(s)	75, 342, 410, 929
StyD4I	CCNGG	3 cut(s)	224, 619, 1207
StyI	CCWWGG	2 cut(s)	74, 1137
TaiI	ACGT	4 cut(s)	56, 128, 944, 1031
TaqI	TCGA	1 cut(s)	305
TatI	WGTACW	2 cut(s)	171, 268
TauI	GCSGC	3 cut(s)	137, 372, 872
TfiI	GAWTC	4 cut(s)	254, 491, 1018, 1500
Tru1I	TTAA	7 cut(s)	101, 437, 897, 1025, 1061, 1146, 1182
Tru9I	TTAA	7 cut(s)	101, 437, 897, 1025, 1061, 1146, 1182
TscAI	CASTG	2 cut(s)	898, 1105
TseFI	GTSAC	2 cut(s)	183, 572
TseI	GCWGC	6 cut(s)	36, 221, 246, 278, 281, 1519
Tsp45I	GTSAC	2 cut(s)	183, 572
TspDTI	ATGAA	4 cut(s)	17, 504, 751, 1247
TspGWI	ACGGA	2 cut(s)	698, 936
TspRI	CASTG	2 cut(s)	898, 1105
VspI	ATTAAT	1 cut(s)	1146
XapI	RAATTY	5 cut(s)	4, 466, 607, 719, 1254
XbaI	TCTAGA	1 cut(s)	409
XceI	RCATGY	3 cut(s)	638, 1325, 1331
XmaJI	CCTAGG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	678
XspI	CTAG	4 cut(s)	75, 342, 410, 929
ZrmI	AGTACT	2 cut(s)	173, 270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.