Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

11663845 .. 11666578

Gene Structure 2734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G081500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGGCGAGAAGATTTGATATTGCAGTGATGAAACCATACAGAAGCGACTCTCCACCTCTTCACTTTAAGTTGGAAATAAATTCATACTCCTCCTTATTGACGACGCTAGCAAAAAAGTACGAATCTAAAGTGTTTGAAGCTGGCGGTCACACATGGAGGTTGGCTGTTTACCCAAGTCAAATGATAAATGGAGAGAAGTACATCTCCCTCTACTTGGCAAAAGCGAAGACAAAGAATAATGGTATTATTAACTCTGTGGTGTCAGCTCTTAGGGGGCAGGCGGAGGTTTATGCTACTTTTAGATTGTCTGTATTTGATCACAACCAAAAGAATTACTTTACCGTCGAAGATAATGCTGGAGCATTAAGCCGATTTGAGAGTGGGACTGAGGTAGGTTTTGCAAAATTTCTTCCCCTTCATACTTTCCAGCGCCATTCAGAGGGATTCATTTCCAATGACTGCTGCACATTTGGGGCCGACGTTTTCGTCTCTACGAATAAAAGGACACTTCACAGGGAATCGCTTTCCCTCGAGACACCTGCCATTCGCAATCGTACTTTCCGTCGTGATTTGGGACAGTTCTCCACACAATTTGACATGGAGTACGCATTTCCACAGTTGATCATTGTTGGAGGAAGAAAATGGCAGTTATGTGTTTATCCGAAAGGTTACAGGAAAGAGAAGAACAAATCACTATCAGTTTACCTACGATCGGCCGACGATTTGGACACGCTTCCCAGTGTTTATGCAGAATTCAAGGTTCGGGTAATTGATCGAACCCTTAAGACGCACAATACTGAACGGAGAGGCAACCACTGGTTCTCGTCCTCAGACTGCATTTCTGGTTGGCCAGATTTTATGCCGTTGCGAACTCTAAAGGGGTTCCTTAAGGGTGATATATTATCTGTTGAAGTTGAAATGCTGGCTGTGTCTACGTCGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

315

Amino Acids

35.87

Weight (kDa)

9.42

Isoelectric Point (pI)

35.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	547
AasI	GACNNNNNNGTC	1 cut(s)	485
Acc36I	ACCTGC	1 cut(s)	547
AccI	GTMKAC	1 cut(s)	932
AciI	CCGC	2 cut(s)	144, 281
AcoI	YGGCCR	2 cut(s)	714, 848
AcsI	RAATTY	3 cut(s)	79, 404, 752
AfaI	GTAC	4 cut(s)	119, 200, 556, 605
AfiI	CCNNNNNNNGG	3 cut(s)	214, 439, 712
AflII	CTTAAG	2 cut(s)	782, 887
AgsI	TTSAA	4 cut(s)	137, 757, 911, 917
AluBI	AGCT	2 cut(s)	140, 266
AluI	AGCT	2 cut(s)	140, 266
Alw26I	GTCTC	2 cut(s)	493, 527
Ama87I	CYCGRG	1 cut(s)	530
AoxI	GGCC	3 cut(s)	474, 714, 848
ApeKI	GCWGC	1 cut(s)	462
ApoI	RAATTY	3 cut(s)	79, 404, 752
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	1 cut(s)	474
AsuHPI	GGTGA	1 cut(s)	905
AsuNHI	GCTAGC	1 cut(s)	106
AvaI	CYCGRG	1 cut(s)	530
BalI	TGGCCA	1 cut(s)	850
BbsI	GAAGAC	1 cut(s)	233
BbvI	GCAGC	1 cut(s)	449
BceAI	ACGGC	1 cut(s)	847
BcgI	CGANNNNNNTGC	4 cut(s)	335, 369, 521, 555
BclI	TGATCA	2 cut(s)	316, 621
BcoDI	GTCTC	2 cut(s)	493, 527
BfaI	CTAG	1 cut(s)	107
BfoI	RGCGCY	1 cut(s)	433
BfrI	CTTAAG	2 cut(s)	782, 887
BfuAI	ACCTGC	1 cut(s)	547
BisI	GCNGC	1 cut(s)	463
BlsI	GCNGC	1 cut(s)	464
BmeT110I	CYCGRG	1 cut(s)	530
BmgT120I	GGNCC	1 cut(s)	474
BmiI	GGNNCC	2 cut(s)	475, 884
BmrI	ACTGGG	1 cut(s)	732
BmtI	GCTAGC	1 cut(s)	110
BmuI	ACTGGG	1 cut(s)	732
BpiI	GAAGAC	1 cut(s)	233
BpmI	CTGGAG	1 cut(s)	378
Bsc4I	CCNNNNNNNGG	3 cut(s)	214, 439, 712
Bse1I	ACTGG	2 cut(s)	738, 821
BseLI	CCNNNNNNNGG	3 cut(s)	214, 439, 712
BseMII	CTCAG	2 cut(s)	378, 843
BseNI	ACTGG	2 cut(s)	738, 821
BseRI	GAGGAG	1 cut(s)	79
BseX3I	CGGCCG	1 cut(s)	714
BseXI	GCAGC	1 cut(s)	449
BsgI	GTGCAG	1 cut(s)	448
Bsh1285I	CGRYCG	2 cut(s)	713, 717
BshFI	GGCC	3 cut(s)	476, 716, 850
BsiEI	CGRYCG	2 cut(s)	713, 717
BsiHKCI	CYCGRG	1 cut(s)	530
BslFI	GGGAC	2 cut(s)	397, 588
BslI	CCNNNNNNNGG	3 cut(s)	214, 439, 712
BsmAI	GTCTC	2 cut(s)	493, 527
BsmBI	CGTCTC	1 cut(s)	493
BsmFI	GGGAC	2 cut(s)	397, 588
BsnI	GGCC	3 cut(s)	476, 716, 850
BsoBI	CYCGRG	1 cut(s)	530
Bsp143I	GATC	4 cut(s)	316, 621, 710, 772
BspACI	CCGC	2 cut(s)	144, 281
BspANI	GGCC	3 cut(s)	476, 716, 850
BspCNI	CTCAG	2 cut(s)	379, 842
BspLI	GGNNCC	2 cut(s)	475, 884
BspMI	ACCTGC	1 cut(s)	547
BspOI	GCTAGC	1 cut(s)	110
BspTI	CTTAAG	2 cut(s)	782, 887
BsrI	ACTGG	2 cut(s)	738, 821
BssMI	GATC	4 cut(s)	316, 621, 710, 772
Bst4CI	ACNGT	3 cut(s)	343, 579, 618
Bst6I	CTCTTC	1 cut(s)	63
BstAFI	CTTAAG	2 cut(s)	782, 887
BstC8I	GCNNGC	4 cut(s)	108, 142, 279, 924
BstDEI	CTNAG	3 cut(s)	269, 387, 829
BstH2I	RGCGCY	1 cut(s)	433
BstHHI	GCGC	1 cut(s)	432
BstKTI	GATC	4 cut(s)	319, 624, 713, 775
BstMAI	GTCTC	2 cut(s)	493, 527
BstMBI	GATC	4 cut(s)	316, 621, 710, 772
BstMCI	CGRYCG	2 cut(s)	713, 717
BstV1I	GCAGC	1 cut(s)	449
BstV2I	GAAGAC	1 cut(s)	233
BstZI	CGGCCG	1 cut(s)	714
BsuRI	GGCC	3 cut(s)	476, 716, 850
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	3 cut(s)	30, 745, 814
BveI	ACCTGC	1 cut(s)	547
Cac8I	GCNNGC	4 cut(s)	108, 142, 279, 924
CfoI	GCGC	1 cut(s)	432
Cfr13I	GGNCC	1 cut(s)	474
CseI	GACGC	2 cut(s)	112, 796
Csp6I	GTAC	4 cut(s)	118, 199, 555, 604
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CviAII	CATG	2 cut(s)	153, 598
CviJI	RGCY	8 cut(s)	140, 164, 266, 369, 476, 716, 850, 926
CviKI_1	RGCY	8 cut(s)	140, 164, 266, 369, 476, 716, 850, 926
CviQI	GTAC	4 cut(s)	118, 199, 555, 604
DdeI	CTNAG	3 cut(s)	269, 387, 829
DpnI	GATC	4 cut(s)	318, 623, 712, 774
DpnII	GATC	4 cut(s)	316, 621, 710, 772
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	2 cut(s)	714, 848
EagI	CGGCCG	1 cut(s)	714
Eam1104I	CTCTTC	1 cut(s)	63
EarI	CTCTTC	1 cut(s)	63
EciI	GGCGGA	1 cut(s)	296
EclXI	CGGCCG	1 cut(s)	714
Eco52I	CGGCCG	1 cut(s)	714
Eco88I	CYCGRG	1 cut(s)	530
EcoRI	GAATTC	1 cut(s)	752
Esp3I	CGTCTC	1 cut(s)	493
FaeI	CATG	2 cut(s)	156, 601
FalI	AAGNNNNNCTT	2 cut(s)	320, 352
FaqI	GGGAC	2 cut(s)	397, 588
FatI	CATG	2 cut(s)	152, 597
FbaI	TGATCA	2 cut(s)	316, 621
FblI	GTMKAC	1 cut(s)	932
Fnu4HI	GCNGC	1 cut(s)	463
Fsp4HI	GCNGC	1 cut(s)	463
FspBI	CTAG	1 cut(s)	107
GlaI	GCGC	1 cut(s)	431
GluI	GCNGC	1 cut(s)	463
GsuI	CTGGAG	1 cut(s)	378
HaeII	RGCGCY	1 cut(s)	433
HaeIII	GGCC	3 cut(s)	476, 716, 850
HgaI	GACGC	2 cut(s)	112, 796
HhaI	GCGC	1 cut(s)	432
Hin1II	CATG	2 cut(s)	156, 601
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HinfI	GANTC	4 cut(s)	47, 122, 444, 518
HphI	GGTGA	1 cut(s)	905
Hpy166II	GTNNAC	3 cut(s)	169, 703, 933
Hpy188I	TCNGA	3 cut(s)	439, 663, 832
Hpy188III	TCNNGA	2 cut(s)	532, 566
Hpy8I	GTNNAC	3 cut(s)	169, 703, 933
Hpy99I	CGWCG	6 cut(s)	106, 347, 482, 567, 722, 940
HpyAV	CCTTC	1 cut(s)	425
HpyCH4III	ACNGT	3 cut(s)	343, 579, 618
HpyCH4IV	ACGT	2 cut(s)	480, 935
HpyCH4V	TGCA	5 cut(s)	23, 401, 465, 749, 837
HpyF3I	CTNAG	3 cut(s)	269, 387, 829
HpySE526I	ACGT	2 cut(s)	480, 935
Hsp92II	CATG	2 cut(s)	156, 601
HspAI	GCGC	1 cut(s)	430
Ksp22I	TGATCA	2 cut(s)	316, 621
Kzo9I	GATC	4 cut(s)	316, 621, 710, 772
LmnI	GCTCC	1 cut(s)	359
Lsp1109I	GCAGC	1 cut(s)	449
MaeI	CTAG	1 cut(s)	107
MaeII	ACGT	2 cut(s)	480, 935
MaeIII	GTNAC	2 cut(s)	146, 668
MalI	GATC	4 cut(s)	318, 623, 712, 774
MboI	GATC	4 cut(s)	316, 621, 710, 772
MboII	GAAGA	7 cut(s)	21, 50, 238, 359, 401, 648, 694
MlsI	TGGCCA	1 cut(s)	850
MluCI	AATT	6 cut(s)	79, 331, 404, 590, 752, 768
MluNI	TGGCCA	1 cut(s)	850
MlyI	GAGTC	1 cut(s)	41
MmeI	TCCRAC	2 cut(s)	51, 610
Mox20I	TGGCCA	1 cut(s)	850
MscI	TGGCCA	1 cut(s)	850
MseI	TTAA	5 cut(s)	66, 249, 365, 783, 888
Msp20I	TGGCCA	1 cut(s)	850
MspCI	CTTAAG	2 cut(s)	782, 887
NdeII	GATC	4 cut(s)	316, 621, 710, 772
NheI	GCTAGC	1 cut(s)	106
NlaIII	CATG	2 cut(s)	156, 601
NlaIV	GGNNCC	2 cut(s)	475, 884
NmuCI	GTSAC	1 cut(s)	146
PaeR7I	CTCGAG	1 cut(s)	530
PaqCI	CACCTGC	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	1 cut(s)	559
PfeI	GAWTC	3 cut(s)	122, 444, 518
PkrI	GCNGC	1 cut(s)	464
Ple19I	CGATCG	1 cut(s)	713
PleI	GAGTC	1 cut(s)	41
PpsI	GAGTC	1 cut(s)	41
PspN4I	GGNNCC	2 cut(s)	475, 884
PspPI	GGNCC	1 cut(s)	474
PvuI	CGATCG	1 cut(s)	713
RsaI	GTAC	4 cut(s)	119, 200, 556, 605
RsaNI	GTAC	4 cut(s)	118, 199, 555, 604
SaqAI	TTAA	5 cut(s)	66, 249, 365, 783, 888
SatI	GCNGC	1 cut(s)	463
Sau3AI	GATC	4 cut(s)	316, 621, 710, 772
Sau96I	GGNCC	1 cut(s)	474
SchI	GAGTC	1 cut(s)	41
Sfr274I	CTCGAG	1 cut(s)	530
SlaI	CTCGAG	1 cut(s)	530
SmlI	CTYRAG	3 cut(s)	530, 782, 887
SmoI	CTYRAG	3 cut(s)	530, 782, 887
Sse9I	AATT	6 cut(s)	79, 331, 404, 590, 752, 768
SsiI	CCGC	2 cut(s)	144, 281
SspMI	CTAG	1 cut(s)	107
TaaI	ACNGT	3 cut(s)	343, 579, 618
TaiI	ACGT	2 cut(s)	483, 938
TaqI	TCGA	3 cut(s)	345, 531, 775
TasI	AATT	6 cut(s)	79, 331, 404, 590, 752, 768
TatI	WGTACW	1 cut(s)	198
TfiI	GAWTC	3 cut(s)	122, 444, 518
Tru1I	TTAA	5 cut(s)	66, 249, 365, 783, 888
Tru9I	TTAA	5 cut(s)	66, 249, 365, 783, 888
TscAI	CASTG	3 cut(s)	30, 745, 821
TseFI	GTSAC	1 cut(s)	146
TseI	GCWGC	1 cut(s)	462
Tsp45I	GTSAC	1 cut(s)	146
TspDTI	ATGAA	4 cut(s)	44, 72, 407, 436
TspGWI	ACGGA	2 cut(s)	551, 817
TspRI	CASTG	3 cut(s)	30, 745, 821
Vha464I	CTTAAG	2 cut(s)	782, 887
XapI	RAATTY	3 cut(s)	79, 404, 752
XhoI	CTCGAG	1 cut(s)	530
XmiI	GTMKAC	1 cut(s)	932
XspI	CTAG	1 cut(s)	107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.