Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

11667869 .. 11670056

Gene Structure 2188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G081600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGCGAAATTTGATATTCCAGAGATGAGAGAATACAAAAGAGAGTATCCACCAGAGCACTTCATCGTGGAAATAAAGCCATACTCCTTGCTATCAAACACCAAAGCAGAAAAGTACGAGTCTGGTGTCTTTGATGCTGGTGGTTACAGATGGAGGCTGTCATTTTACCCAAATTATGAAACAACAAGTAAGAAGGGTTACATCTCCCTCTTCTTGGTATTAATAGGGAGTGTGTCCGGGAAGCAGTCGCCGGCCGAAGTTTATGCCACTTTTAGATTGTTTTTATACAAGAATACACCCGAAACACAGGAATACTTGACCATAGAAGATGGTTCTGGAAAAGTAAATCACTTTCATGAGGAGATGAGGCCGGAGTTGGGTTTTGCAAAATTTCTTCTCCGTTCGACTTTCGAGAAACGGTCTGAGGGATACGTTTGGGACGATTGCTGCAGAATTGGGGCAGAGGTTTTTGTTCATAAGGGCCAAACGAAAACTCTTGACGAATATCTTCCCCCCCGGGAACTCAAAAATCCAACCTCAAGTGTCCGTAAGTTTAGGTTGGGAAGCATCTCATCAAAACGTGACCCGAAGTGTCTATCTTCAGATAAATTCCATCTTCAAGGAAGAAAATGGAAGTTAAGTGTTTGTCAGAATGGAGAACCAGAGAACAAATCACTATCATTTATGTTAGAATCGAAAGAAGATTGGAAGAGCTTTCCGAGCTTTTATGCGAAATTCAGGGTTCGGGTATTGGATCGAGTCCATGGTAAACATACTACTGAAAAAGAAGTTCAACACTGGTTCTGTTCCTCAAACCGCAAAATTGTTTTCCCAGACTTTATGCCGTGGAAAACTCTCCGTGATTCGTCGAAGGGGTTCATTAAGAATGATGTATTAACTGTTGAAGTAGAAATATGCTCGCTATCTGTGGTTGAAGCTCCTAGAATATTAAAAAAACCATTGTCTTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

325

Amino Acids

37.78

Weight (kDa)

9.13

Isoelectric Point (pI)

42.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	817
AclWI	GGATC	1 cut(s)	762
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	4 cut(s)	8, 389, 608, 734
AcuI	CTGAAG	1 cut(s)	585
AfaI	GTAC	1 cut(s)	116
AfiI	CCNNNNNNNGG	2 cut(s)	214, 377
AgsI	TTSAA	4 cut(s)	620, 794, 905, 935
AluBI	AGCT	3 cut(s)	714, 723, 938
AluI	AGCT	3 cut(s)	714, 723, 938
Alw21I	GWGCWC	1 cut(s)	60
AlwI	GGATC	1 cut(s)	762
Ama87I	CYCGRG	1 cut(s)	516
AoxI	GGCC	3 cut(s)	252, 368, 481
ApeKI	GCWGC	1 cut(s)	447
ApoI	RAATTY	4 cut(s)	8, 389, 608, 734
AseI	ATTAAT	1 cut(s)	221
Asp700I	GAANNNNTTC	2 cut(s)	507, 875
AspS9I	GGNCC	1 cut(s)	481
AsuC2I	CCSGG	3 cut(s)	238, 517, 518
AvaI	CYCGRG	1 cut(s)	516
BbsI	GAAGAC	1 cut(s)	957
Bbv12I	GWGCWC	1 cut(s)	60
BbvI	GCAGC	1 cut(s)	434
BccI	CCATC	3 cut(s)	144, 323, 621
BceAI	ACGGC	1 cut(s)	829
BcgI	CGANNNNNNTGC	2 cut(s)	245, 279
BciVI	GTATCC	2 cut(s)	57, 422
BcnI	CCSGG	3 cut(s)	238, 517, 518
BfaI	CTAG	1 cut(s)	942
BfmI	CTRYAG	1 cut(s)	448
BfuI	GTATCC	2 cut(s)	57, 422
BisI	GCNGC	1 cut(s)	448
BlsI	GCNGC	1 cut(s)	449
Bme1390I	CCNGG	3 cut(s)	238, 517, 518
BmeT110I	CYCGRG	1 cut(s)	516
BmgT120I	GGNCC	1 cut(s)	481
BmrFI	CCNGG	3 cut(s)	238, 517, 518
BmsI	GCATC	2 cut(s)	124, 576
BpiI	GAAGAC	1 cut(s)	957
BpuEI	CTTGAG	1 cut(s)	523
BpuMI	CCSGG	3 cut(s)	238, 517, 518
BsaJI	CCNNGG	4 cut(s)	515, 516, 763, 845
Bsc4I	CCNNNNNNNGG	2 cut(s)	214, 377
Bse118I	RCCGGY	1 cut(s)	250
Bse1I	ACTGG	1 cut(s)	803
BseDI	CCNNGG	4 cut(s)	515, 516, 763, 845
BseLI	CCNNNNNNNGG	2 cut(s)	214, 377
BseMII	CTCAG	1 cut(s)	414
BseNI	ACTGG	1 cut(s)	803
BseRI	GAGGAG	1 cut(s)	374
BseX3I	CGGCCG	1 cut(s)	252
BseXI	GCAGC	1 cut(s)	434
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	3 cut(s)	254, 370, 483
BsiEI	CGRYCG	1 cut(s)	255
BsiHKAI	GWGCWC	1 cut(s)	60
BsiHKCI	CYCGRG	1 cut(s)	516
BsiSI	CCGG	4 cut(s)	237, 251, 371, 517
BslFI	GGGAC	1 cut(s)	452
BslI	CCNNNNNNNGG	2 cut(s)	214, 377
BsmFI	GGGAC	1 cut(s)	452
BsnI	GGCC	3 cut(s)	254, 370, 483
BsoBI	CYCGRG	1 cut(s)	516
Bsp1286I	GDGCHC	1 cut(s)	60
Bsp143I	GATC	1 cut(s)	754
Bsp19I	CCATGG	1 cut(s)	763
BspACI	CCGC	1 cut(s)	817
BspANI	GGCC	3 cut(s)	254, 370, 483
BspCNI	CTCAG	1 cut(s)	415
BspHI	TCATGA	1 cut(s)	355
BspMAI	CTGCAG	1 cut(s)	452
BspPI	GGATC	1 cut(s)	762
BspQI	GCTCTTC	1 cut(s)	704
BsrFI	RCCGGY	1 cut(s)	250
BsrI	ACTGG	1 cut(s)	803
BssAI	RCCGGY	1 cut(s)	250
BssECI	CCNNGG	4 cut(s)	515, 516, 763, 845
BssMI	GATC	1 cut(s)	754
BssT1I	CCWWGG	1 cut(s)	763
Bst4CI	ACNGT	2 cut(s)	420, 901
Bst6I	CTCTTC	2 cut(s)	215, 704
BstC8I	GCNNGC	2 cut(s)	252, 920
BstDEI	CTNAG	1 cut(s)	423
BstDSI	CCRYGG	2 cut(s)	763, 845
BstKTI	GATC	1 cut(s)	757
BstMBI	GATC	1 cut(s)	754
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	1 cut(s)	720
BstSCI	CCNGG	3 cut(s)	236, 515, 516
BstSFI	CTRYAG	1 cut(s)	448
BstV1I	GCAGC	1 cut(s)	434
BstV2I	GAAGAC	1 cut(s)	957
BstZI	CGGCCG	1 cut(s)	252
BsuI	GTATCC	2 cut(s)	57, 422
BsuRI	GGCC	3 cut(s)	254, 370, 483
BtgI	CCRYGG	2 cut(s)	763, 845
BtsIMutI	CAGTG	1 cut(s)	796
Cac8I	GCNNGC	2 cut(s)	252, 920
CciI	TCATGA	1 cut(s)	355
Cfr10I	RCCGGY	1 cut(s)	250
Cfr13I	GGNCC	1 cut(s)	481
Cfr9I	CCCGGG	1 cut(s)	516
Csp6I	GTAC	1 cut(s)	115
CviAII	CATG	2 cut(s)	356, 764
CviJI	RGCY	8 cut(s)	79, 157, 254, 370, 483, 714, 723, 938
CviKI_1	RGCY	8 cut(s)	79, 157, 254, 370, 483, 714, 723, 938
CviQI	GTAC	1 cut(s)	115
DdeI	CTNAG	1 cut(s)	423
DpnI	GATC	1 cut(s)	756
DpnII	GATC	1 cut(s)	754
EaeI	YGGCCR	1 cut(s)	252
EagI	CGGCCG	1 cut(s)	252
Eam1104I	CTCTTC	2 cut(s)	215, 704
EarI	CTCTTC	2 cut(s)	215, 704
EclXI	CGGCCG	1 cut(s)	252
Eco130I	CCWWGG	1 cut(s)	763
Eco52I	CGGCCG	1 cut(s)	252
Eco57I	CTGAAG	1 cut(s)	585
Eco88I	CYCGRG	1 cut(s)	516
EcoT14I	CCWWGG	1 cut(s)	763
ErhI	CCWWGG	1 cut(s)	763
FaeI	CATG	2 cut(s)	359, 767
FaqI	GGGAC	1 cut(s)	452
FatI	CATG	2 cut(s)	355, 763
Fnu4HI	GCNGC	1 cut(s)	448
Fsp4HI	GCNGC	1 cut(s)	448
FspBI	CTAG	1 cut(s)	942
GluI	GCNGC	1 cut(s)	448
HaeIII	GGCC	3 cut(s)	254, 370, 483
HapII	CCGG	4 cut(s)	237, 251, 371, 517
Hin1II	CATG	2 cut(s)	359, 767
HinfI	GANTC	4 cut(s)	119, 692, 759, 863
HpaII	CCGG	4 cut(s)	237, 251, 371, 517
Hpy166II	GTNNAC	1 cut(s)	770
Hpy188I	TCNGA	5 cut(s)	424, 604, 651, 720, 970
Hpy188III	TCNNGA	5 cut(s)	20, 336, 356, 412, 497
Hpy8I	GTNNAC	1 cut(s)	770
Hpy99I	CGWCG	1 cut(s)	871
HpyAV	CCTTC	2 cut(s)	187, 865
HpyCH4III	ACNGT	2 cut(s)	420, 901
HpyCH4IV	ACGT	2 cut(s)	432, 580
HpyCH4V	TGCA	2 cut(s)	386, 450
HpyF10VI	GCNNNNNNNGC	1 cut(s)	720
HpyF3I	CTNAG	1 cut(s)	423
HpySE526I	ACGT	2 cut(s)	432, 580
Hsp92II	CATG	2 cut(s)	359, 767
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Kzo9I	GATC	1 cut(s)	754
LguI	GCTCTTC	1 cut(s)	704
LmnI	GCTCC	1 cut(s)	943
Lsp1109I	GCAGC	1 cut(s)	434
LweI	GCATC	2 cut(s)	124, 576
MaeI	CTAG	1 cut(s)	942
MaeII	ACGT	2 cut(s)	432, 580
MaeIII	GTNAC	3 cut(s)	143, 197, 581
MalI	GATC	1 cut(s)	756
MboI	GATC	1 cut(s)	754
MhlI	GDGCHC	1 cut(s)	60
MluCI	AATT	7 cut(s)	8, 172, 389, 453, 608, 734, 822
MlyI	GAGTC	2 cut(s)	128, 768
MmeI	TCCRAC	1 cut(s)	557
MnlI	CCTC	8 cut(s)	147, 218, 352, 360, 418, 457, 547, 820
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	507, 875
MseI	TTAA	6 cut(s)	221, 638, 882, 896, 950, 973
MslI	CAYNNNNRTG	1 cut(s)	354
MspI	CCGG	4 cut(s)	237, 251, 371, 517
MspR9I	CCNGG	3 cut(s)	238, 517, 518
MwoI	GCNNNNNNNGC	1 cut(s)	720
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	3 cut(s)	238, 517, 518
NcoI	CCATGG	1 cut(s)	763
NdeII	GATC	1 cut(s)	754
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	2 cut(s)	359, 767
NmuCI	GTSAC	1 cut(s)	581
PagI	TCATGA	1 cut(s)	355
PciSI	GCTCTTC	1 cut(s)	704
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	2 cut(s)	507, 875
PfeI	GAWTC	2 cut(s)	692, 863
PfoI	TCCNGGA	1 cut(s)	236
PkrI	GCNGC	1 cut(s)	449
PleI	GAGTC	2 cut(s)	127, 767
PpsI	GAGTC	2 cut(s)	127, 767
PshBI	ATTAAT	1 cut(s)	221
PspPI	GGNCC	1 cut(s)	481
PstI	CTGCAG	1 cut(s)	452
RsaI	GTAC	1 cut(s)	116
RsaNI	GTAC	1 cut(s)	115
RseI	CAYNNNNRTG	1 cut(s)	354
SapI	GCTCTTC	1 cut(s)	704
SaqAI	TTAA	6 cut(s)	221, 638, 882, 896, 950, 973
SatI	GCNGC	1 cut(s)	448
Sau3AI	GATC	1 cut(s)	754
Sau96I	GGNCC	1 cut(s)	481
SchI	GAGTC	2 cut(s)	128, 768
ScrFI	CCNGG	3 cut(s)	238, 517, 518
SduI	GDGCHC	1 cut(s)	60
SetI	ASST	8 cut(s)	435, 468, 539, 560, 583, 716, 725, 940
SfaNI	GCATC	2 cut(s)	124, 576
SfcI	CTRYAG	1 cut(s)	448
SmaI	CCCGGG	1 cut(s)	518
SmiMI	CAYNNNNRTG	1 cut(s)	354
SmlI	CTYRAG	1 cut(s)	538
SmoI	CTYRAG	1 cut(s)	538
Sse9I	AATT	7 cut(s)	8, 172, 389, 453, 608, 734, 822
SsiI	CCGC	1 cut(s)	817
SspI	AATATT	1 cut(s)	948
SspMI	CTAG	1 cut(s)	942
StyD4I	CCNGG	3 cut(s)	236, 515, 516
StyI	CCWWGG	1 cut(s)	763
TaaI	ACNGT	2 cut(s)	420, 901
TaiI	ACGT	2 cut(s)	435, 583
TaqI	TCGA	5 cut(s)	404, 411, 695, 757, 869
TasI	AATT	7 cut(s)	8, 172, 389, 453, 608, 734, 822
TfiI	GAWTC	2 cut(s)	692, 863
Tru1I	TTAA	6 cut(s)	221, 638, 882, 896, 950, 973
Tru9I	TTAA	6 cut(s)	221, 638, 882, 896, 950, 973
TscAI	CASTG	1 cut(s)	803
TseFI	GTSAC	1 cut(s)	581
TseI	GCWGC	1 cut(s)	447
Tsp45I	GTSAC	1 cut(s)	581
TspDTI	ATGAA	5 cut(s)	52, 192, 344, 464, 868
TspGWI	ACGGA	3 cut(s)	389, 536, 848
TspMI	CCCGGG	1 cut(s)	516
TspRI	CASTG	1 cut(s)	803
VspI	ATTAAT	1 cut(s)	221
XapI	RAATTY	4 cut(s)	8, 389, 608, 734
XmaI	CCCGGG	1 cut(s)	516
XmnI	GAANNNNTTC	2 cut(s)	507, 875
XspI	CTAG	1 cut(s)	942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.