Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000953.1

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

79710 .. 84716

Gene Structure 5007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000953.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

atgttaacactagaaaacgacgatactgcaggccgaatcctattgtcgtcctatgaccttccatctcttctggcggcctcttctccttctctctttcacgatctgagatcgggaatgtggagcttgcaagcccgaagaagatggttgaaagtcaaggatacccaaaaggacaacaatctgccaaggatccaggtcaattatgcattgactcttccatcactttttgttttttccccgcggcatcaacaccttgaaggcttgacggagccaatactggaacctgttccaatcctgaaccaagcgcgctctcgcgcaccaaaaccaactccaatgaatttgcaacctgtatcagttcttctacaaagctggaagcctccaatgacgttaggctcgccgtttatgcctaggtcatcgtcccaattgcaacccttaaataagcacacgctcaccatgacgttgccggcggcctccgaactctctcaaagcaaatggagccttcagtactcgcatctgtcaccagttcctgctcggcacatagctcctgttagcgcagccaggttgccattgcaatggagctgcttggaatcacttgtcccagtactcagcgcagcagcttgggctgtccaactgatatcgagcttgctcatgttcttcagggagtctcaaagccctagattattagaccaaagacaaagtagcggcttagttccgcaagatgcttctacacagaaaatgtgcttcaatggggatatgccttgtgcggccggttttgataagcttatccgcgttaaagattttactgatgactccaacggatatctagttgatgacacgtgcatgtttggtgctgatgtctttgtctgtaaagaaaggagaacaggcaaaggggagtgtctatcaaggatccagaatccttcaacgtacaattccgcccctgagcatcacactcaaaatcaattggtgtggaggcccaggcattttgaggactggcttggtgcgttgtacggtttgttctggtctggattgggtcggaagggtatgcaagtgcgttgtcttgggtggtggcgtcaacgggatattgttggtggctctggaatggtggcgacggtggtcaactggtcatggccagtgttgagatcatggttctggtggtggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

385

Amino Acids

43.61

Weight (kDa)

9.41

Isoelectric Point (pI)

66.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	4 cut(s)	238, 304, 312, 786
AciI	CCGC	9 cut(s)	74, 236, 238, 464, 699, 710, 761, 784, 930
AclWI	GGATC	4 cut(s)	181, 194, 898, 911
AcoI	YGGCCR	2 cut(s)	762, 1124
AcsI	RAATTY	1 cut(s)	334
AcuI	CTGAAG	2 cut(s)	482, 637
AcvI	CACGTG	1 cut(s)	834
AcyI	GRCGYC	1 cut(s)	1066
AfaI	GTAC	4 cut(s)	503, 600, 923, 1004
AflIII	ACRYGT	1 cut(s)	831
AgsI	TTSAA	4 cut(s)	148, 254, 742, 918
AjnI	CCWGG	3 cut(s)	189, 554, 971
AluBI	AGCT	7 cut(s)	123, 366, 539, 576, 614, 639, 778
AluI	AGCT	7 cut(s)	123, 366, 539, 576, 614, 639, 778
Alw26I	GTCTC	1 cut(s)	666
AlwI	GGATC	4 cut(s)	181, 194, 898, 911
AlwNI	CAGNNNCTG	1 cut(s)	524
AoxI	GGCC	6 cut(s)	31, 75, 465, 762, 968, 1124
ApeKI	GCWGC	4 cut(s)	551, 576, 608, 611
ApoI	RAATTY	1 cut(s)	334
Asp700I	GAANNNNTTC	1 cut(s)	282
AspA2I	CCTAGG	1 cut(s)	404
AspLEI	GCGC	5 cut(s)	304, 306, 314, 551, 608
AspS9I	GGNCC	1 cut(s)	969
AsuHPI	GGTGA	2 cut(s)	439, 507
AvrII	CCTAGG	1 cut(s)	404
BalI	TGGCCA	1 cut(s)	1126
BamHI	GGATCC	2 cut(s)	186, 903
BarI	GAAGNNNNNNTAC	2 cut(s)	339, 371
BbrPI	CACGTG	1 cut(s)	834
BbvI	GCAGC	4 cut(s)	563, 563, 620, 623
BccI	CCATC	3 cut(s)	70, 135, 223
BceAI	ACGGC	1 cut(s)	379
BcgI	CGANNNNNNTGC	2 cut(s)	8, 42
BciT130I	CCWGG	3 cut(s)	191, 556, 973
BciVI	GTATCC	1 cut(s)	151
BcoDI	GTCTC	1 cut(s)	666
BfaI	CTAG	4 cut(s)	11, 405, 672, 821
BfmI	CTRYAG	1 cut(s)	27
BfuI	GTATCC	1 cut(s)	151
BisI	GCNGC	9 cut(s)	75, 239, 465, 552, 577, 609, 612, 700, 762
BlnI	CCTAGG	1 cut(s)	404
BlsI	GCNGC	9 cut(s)	76, 240, 466, 553, 578, 610, 613, 701, 763
BmcAI	AGTACT	2 cut(s)	503, 600
Bme1390I	CCNGG	3 cut(s)	191, 556, 973
BmgT120I	GGNCC	1 cut(s)	969
BmiI	GGNNCC	5 cut(s)	188, 267, 279, 494, 905
BmrFI	CCNGG	3 cut(s)	191, 556, 973
BmrI	ACTGGG	1 cut(s)	590
BmsI	GCATC	4 cut(s)	250, 517, 706, 949
BmuI	ACTGGG	1 cut(s)	590
BoxI	GACNNNNGTC	1 cut(s)	1109
Bpu10I	CCTNAGC	1 cut(s)	936
BsaAI	YACGTR	1 cut(s)	834
BsaHI	GRCGYC	1 cut(s)	1066
BsaJI	CCNNGG	4 cut(s)	182, 236, 404, 971
Bse118I	RCCGGY	2 cut(s)	460, 764
Bse1I	ACTGG	6 cut(s)	279, 518, 596, 992, 1121, 1127
Bse3DI	GCAATG	2 cut(s)	563, 575
BseBI	CCWGG	3 cut(s)	191, 556, 973
BseDI	CCNNGG	4 cut(s)	182, 236, 404, 971
BseMI	GCAATG	2 cut(s)	563, 575
BseMII	CTCAG	3 cut(s)	95, 616, 927
BseNI	ACTGG	6 cut(s)	279, 518, 596, 992, 1121, 1127
BsePI	GCGCGC	1 cut(s)	302
BseX3I	CGGCCG	1 cut(s)	762
BseXI	GCAGC	4 cut(s)	563, 563, 620, 623
Bsh1236I	CGCG	4 cut(s)	238, 304, 312, 786
Bsh1285I	CGRYCG	1 cut(s)	765
BshFI	GGCC	6 cut(s)	33, 77, 467, 764, 970, 1126
BsiEI	CGRYCG	1 cut(s)	765
BsiSI	CCGG	2 cut(s)	461, 765
BslFI	GGGAC	2 cut(s)	400, 578
BsmAI	GTCTC	1 cut(s)	666
BsmFI	GGGAC	2 cut(s)	400, 578
BsnI	GGCC	6 cut(s)	33, 77, 467, 764, 970, 1126
Bsp143I	GATC	5 cut(s)	100, 107, 186, 903, 1136
BspACI	CCGC	9 cut(s)	74, 236, 238, 464, 699, 710, 761, 784, 930
BspANI	GGCC	6 cut(s)	33, 77, 467, 764, 970, 1126
BspCNI	CTCAG	3 cut(s)	96, 615, 928
BspFNI	CGCG	4 cut(s)	238, 304, 312, 786
BspLI	GGNNCC	5 cut(s)	188, 267, 279, 494, 905
BspMAI	CTGCAG	1 cut(s)	31
BspPI	GGATC	4 cut(s)	181, 194, 898, 911
BsrDI	GCAATG	2 cut(s)	563, 575
BsrFI	RCCGGY	2 cut(s)	460, 764
BsrI	ACTGG	6 cut(s)	279, 518, 596, 992, 1121, 1127
BssAI	RCCGGY	2 cut(s)	460, 764
BssECI	CCNNGG	4 cut(s)	182, 236, 404, 971
BssHII	GCGCGC	1 cut(s)	302
BssMI	GATC	5 cut(s)	100, 107, 186, 903, 1136
BssNI	GRCGYC	1 cut(s)	1066
BssT1I	CCWWGG	2 cut(s)	182, 404
Bst2UI	CCWGG	3 cut(s)	191, 556, 973
Bst4CI	ACNGT	2 cut(s)	1007, 1108
Bst6I	CTCTTC	3 cut(s)	72, 85, 216
BstACI	GRCGYC	1 cut(s)	1066
BstBAI	YACGTR	1 cut(s)	834
BstC8I	GCNNGC	7 cut(s)	31, 125, 129, 304, 392, 462, 641
BstDEI	CTNAG	4 cut(s)	104, 602, 703, 936
BstDSI	CCRYGG	1 cut(s)	236
BstFNI	CGCG	4 cut(s)	238, 304, 312, 786
BstHHI	GCGC	5 cut(s)	304, 306, 314, 551, 608
BstKTI	GATC	5 cut(s)	103, 110, 189, 906, 1139
BstMAI	GTCTC	1 cut(s)	666
BstMBI	GATC	5 cut(s)	100, 107, 186, 903, 1136
BstMCI	CGRYCG	1 cut(s)	765
BstMWI	GCNNNNNNNGC	3 cut(s)	400, 492, 617
BstNI	CCWGG	3 cut(s)	191, 556, 973
BstNSI	RCATGY	1 cut(s)	841
BstPAI	GACNNNNGTC	1 cut(s)	1109
BstSCI	CCNGG	3 cut(s)	189, 554, 971
BstSFI	CTRYAG	1 cut(s)	27
BstUI	CGCG	4 cut(s)	238, 304, 312, 786
BstV1I	GCAGC	4 cut(s)	563, 563, 620, 623
BstX2I	RGATCY	2 cut(s)	186, 903
BstXI	CCANNNNNNTGG	1 cut(s)	570
BstYI	RGATCY	2 cut(s)	186, 903
BstZI	CGGCCG	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	151
BsuRI	GGCC	6 cut(s)	33, 77, 467, 764, 970, 1126
BtgI	CCRYGG	1 cut(s)	236
BtsIMutI	CAGTG	1 cut(s)	1134
Cac8I	GCNNGC	7 cut(s)	31, 125, 129, 304, 392, 462, 641
CaiI	CAGNNNCTG	1 cut(s)	524
CfoI	GCGC	5 cut(s)	304, 306, 314, 551, 608
Cfr10I	RCCGGY	2 cut(s)	460, 764
Cfr13I	GGNCC	1 cut(s)	969
Cfr42I	CCGCGG	1 cut(s)	239
CseI	GACGC	1 cut(s)	1055
Csp6I	GTAC	4 cut(s)	502, 599, 922, 1003
CspCI	CAANNNNNGTGG	2 cut(s)	944, 979
CviAII	CATG	5 cut(s)	451, 646, 838, 1122, 1140
CviQI	GTAC	4 cut(s)	502, 599, 922, 1003
DdeI	CTNAG	4 cut(s)	104, 602, 703, 936
DpnI	GATC	5 cut(s)	102, 109, 188, 905, 1138
DpnII	GATC	5 cut(s)	100, 107, 186, 903, 1136
EaeI	YGGCCR	2 cut(s)	762, 1124
EagI	CGGCCG	1 cut(s)	762
Eam1104I	CTCTTC	3 cut(s)	72, 85, 216
EarI	CTCTTC	3 cut(s)	72, 85, 216
EciI	GGCGGA	1 cut(s)	919
EclXI	CGGCCG	1 cut(s)	762
Eco130I	CCWWGG	2 cut(s)	182, 404
Eco32I	GATATC	2 cut(s)	633, 818
Eco52I	CGGCCG	1 cut(s)	762
Eco57I	CTGAAG	2 cut(s)	482, 637
Eco72I	CACGTG	1 cut(s)	834
EcoRII	CCWGG	3 cut(s)	189, 554, 971
EcoRV	GATATC	2 cut(s)	633, 818
EcoT14I	CCWWGG	2 cut(s)	182, 404
EcoT22I	ATGCAT	1 cut(s)	205
ErhI	CCWWGG	2 cut(s)	182, 404
FaeI	CATG	5 cut(s)	454, 649, 841, 1125, 1143
FaqI	GGGAC	2 cut(s)	400, 578
FatI	CATG	5 cut(s)	450, 645, 837, 1121, 1139
FauI	CCCGC	1 cut(s)	243
Fnu4HI	GCNGC	9 cut(s)	75, 239, 465, 552, 577, 609, 612, 700, 762
Fsp4HI	GCNGC	9 cut(s)	75, 239, 465, 552, 577, 609, 612, 700, 762
FspBI	CTAG	4 cut(s)	11, 405, 672, 821
GlaI	GCGC	5 cut(s)	303, 305, 313, 550, 607
GluI	GCNGC	9 cut(s)	75, 239, 465, 552, 577, 609, 612, 700, 762
HaeIII	GGCC	6 cut(s)	33, 77, 467, 764, 970, 1126
HapII	CCGG	2 cut(s)	461, 765
HgaI	GACGC	1 cut(s)	1055
HhaI	GCGC	5 cut(s)	304, 306, 314, 551, 608
Hin1I	GRCGYC	1 cut(s)	1066
Hin1II	CATG	5 cut(s)	454, 649, 841, 1125, 1143
Hin6I	GCGC	5 cut(s)	302, 304, 312, 549, 606
HinP1I	GCGC	5 cut(s)	302, 304, 312, 549, 606
HincII	GTYRAC	3 cut(s)	6, 1070, 1114
HindII	GTYRAC	3 cut(s)	6, 1070, 1114
HindIII	AAGCTT	1 cut(s)	776
HinfI	GANTC	6 cut(s)	36, 208, 584, 659, 806, 910
HpaI	GTTAAC	1 cut(s)	6
HpaII	CCGG	2 cut(s)	461, 765
HphI	GGTGA	2 cut(s)	439, 507
Hpy166II	GTNNAC	3 cut(s)	6, 1070, 1114
Hpy188I	TCNGA	3 cut(s)	105, 472, 1032
Hpy188III	TCNNGA	6 cut(s)	98, 111, 292, 907, 1020, 1092
Hpy8I	GTNNAC	3 cut(s)	6, 1070, 1114
Hpy99I	CGWCG	2 cut(s)	23, 1108
HpyAV	CCTTC	6 cut(s)	68, 96, 248, 506, 924, 1027
HpyCH4III	ACNGT	2 cut(s)	1007, 1108
HpyCH4IV	ACGT	4 cut(s)	383, 455, 833, 920
HpyCH4V	TGCA	8 cut(s)	29, 127, 203, 340, 424, 568, 837, 1042
HpyF10VI	GCNNNNNNNGC	3 cut(s)	400, 492, 617
HpyF3I	CTNAG	4 cut(s)	104, 602, 703, 936
HpySE526I	ACGT	4 cut(s)	383, 455, 833, 920
Hsp92I	GRCGYC	1 cut(s)	1066
Hsp92II	CATG	5 cut(s)	454, 649, 841, 1125, 1143
HspAI	GCGC	5 cut(s)	302, 304, 312, 549, 606
KroI	GCCGGC	1 cut(s)	460
KroNI	GCCGGC	1 cut(s)	462
KspAI	GTTAAC	1 cut(s)	6
KspI	CCGCGG	1 cut(s)	239
Kzo9I	GATC	5 cut(s)	100, 107, 186, 903, 1136
LmnI	GCTCC	5 cut(s)	120, 265, 492, 544, 573
Lsp1109I	GCAGC	4 cut(s)	563, 563, 620, 623
LweI	GCATC	4 cut(s)	250, 517, 706, 949
MaeI	CTAG	4 cut(s)	11, 405, 672, 821
MaeII	ACGT	4 cut(s)	383, 455, 833, 920
MaeIII	GTNAC	1 cut(s)	513
MalI	GATC	5 cut(s)	102, 109, 188, 905, 1138
MboI	GATC	5 cut(s)	100, 107, 186, 903, 1136
MboII	GAAGA	7 cut(s)	59, 72, 147, 150, 203, 347, 643
MfeI	CAATTG	2 cut(s)	419, 956
MflI	RGATCY	2 cut(s)	186, 903
MlsI	TGGCCA	1 cut(s)	1126
MluCI	AATT	5 cut(s)	196, 334, 419, 925, 956
MluNI	TGGCCA	1 cut(s)	1126
MlyI	GAGTC	3 cut(s)	202, 668, 800
MmeI	TCCRAC	3 cut(s)	649, 834, 1010
MnlI	CCTC	5 cut(s)	88, 384, 478, 960, 976
Mox20I	TGGCCA	1 cut(s)	1126
Mph1103I	ATGCAT	1 cut(s)	205
MroNI	GCCGGC	1 cut(s)	460
MroXI	GAANNNNTTC	1 cut(s)	282
MscI	TGGCCA	1 cut(s)	1126
MseI	TTAA	3 cut(s)	5, 431, 789
MslI	CAYNNNNRTG	2 cut(s)	568, 836
Msp20I	TGGCCA	1 cut(s)	1126
MspA1I	CMGCKG	1 cut(s)	238
MspI	CCGG	2 cut(s)	461, 765
MspR9I	CCNGG	3 cut(s)	191, 556, 973
MunI	CAATTG	2 cut(s)	419, 956
MvaI	CCWGG	3 cut(s)	191, 556, 973
MvnI	CGCG	4 cut(s)	238, 304, 312, 786
MwoI	GCNNNNNNNGC	3 cut(s)	400, 492, 617
NaeI	GCCGGC	1 cut(s)	462
NdeII	GATC	5 cut(s)	100, 107, 186, 903, 1136
NgoMIV	GCCGGC	1 cut(s)	460
NlaIII	CATG	5 cut(s)	454, 649, 841, 1125, 1143
NlaIV	GGNNCC	5 cut(s)	188, 267, 279, 494, 905
NmeAIII	GCCGAG	1 cut(s)	508
NmuCI	GTSAC	1 cut(s)	513
NsiI	ATGCAT	1 cut(s)	205
NspI	RCATGY	1 cut(s)	841
PauI	GCGCGC	1 cut(s)	302
PdiI	GCCGGC	1 cut(s)	462
PdmI	GAANNNNTTC	1 cut(s)	282
PfeI	GAWTC	3 cut(s)	36, 584, 910
PkrI	GCNGC	9 cut(s)	76, 240, 466, 553, 578, 610, 613, 701, 763
PleI	GAGTC	3 cut(s)	202, 667, 800
PmaCI	CACGTG	1 cut(s)	834
PmlI	CACGTG	1 cut(s)	834
PpsI	GAGTC	3 cut(s)	202, 667, 800
Ppu21I	YACGTR	1 cut(s)	834
PshAI	GACNNNNGTC	1 cut(s)	1109
Psp6I	CCWGG	3 cut(s)	189, 554, 971
PspCI	CACGTG	1 cut(s)	834
PspGI	CCWGG	3 cut(s)	189, 554, 971
PspN4I	GGNNCC	5 cut(s)	188, 267, 279, 494, 905
PspPI	GGNCC	1 cut(s)	969
PsrI	GAACNNNNNNTAC	2 cut(s)	995, 1027
PstI	CTGCAG	1 cut(s)	31
PstNI	CAGNNNCTG	1 cut(s)	524
PsuI	RGATCY	2 cut(s)	186, 903
PteI	GCGCGC	1 cut(s)	302
RsaI	GTAC	4 cut(s)	503, 600, 923, 1004
RsaNI	GTAC	4 cut(s)	502, 599, 922, 1003
RseI	CAYNNNNRTG	2 cut(s)	568, 836
SacII	CCGCGG	1 cut(s)	239
SaqAI	TTAA	3 cut(s)	5, 431, 789
SatI	GCNGC	9 cut(s)	75, 239, 465, 552, 577, 609, 612, 700, 762
Sau3AI	GATC	5 cut(s)	100, 107, 186, 903, 1136
Sau96I	GGNCC	1 cut(s)	969
ScaI	AGTACT	2 cut(s)	503, 600
SchI	GAGTC	3 cut(s)	202, 668, 800
ScrFI	CCNGG	3 cut(s)	191, 556, 973
SfaNI	GCATC	4 cut(s)	250, 517, 706, 949
SfcI	CTRYAG	1 cut(s)	27
Sfr303I	CCGCGG	1 cut(s)	239
SgrBI	CCGCGG	1 cut(s)	239
SmiMI	CAYNNNNRTG	2 cut(s)	568, 836
Sse9I	AATT	5 cut(s)	196, 334, 419, 925, 956
SsiI	CCGC	9 cut(s)	74, 236, 238, 464, 699, 710, 761, 784, 930
SspMI	CTAG	4 cut(s)	11, 405, 672, 821
StyD4I	CCNGG	3 cut(s)	189, 554, 971
StyI	CCWWGG	2 cut(s)	182, 404
TaaI	ACNGT	2 cut(s)	1007, 1108
TaiI	ACGT	4 cut(s)	386, 458, 836, 923
TaqI	TCGA	1 cut(s)	635
TasI	AATT	5 cut(s)	196, 334, 419, 925, 956
TatI	WGTACW	2 cut(s)	501, 598
TauI	GCSGC	5 cut(s)	77, 241, 467, 702, 764
TfiI	GAWTC	3 cut(s)	36, 584, 910
Tru1I	TTAA	3 cut(s)	5, 431, 789
Tru9I	TTAA	3 cut(s)	5, 431, 789
TscAI	CASTG	1 cut(s)	1134
TseFI	GTSAC	1 cut(s)	513
TseI	GCWGC	4 cut(s)	551, 576, 608, 611
Tsp45I	GTSAC	1 cut(s)	513
TspDTI	ATGAA	1 cut(s)	347
TspGWI	ACGGA	2 cut(s)	278, 828
TspRI	CASTG	1 cut(s)	1134
XapI	RAATTY	1 cut(s)	334
XceI	RCATGY	1 cut(s)	841
XmaJI	CCTAGG	1 cut(s)	404
XmnI	GAANNNNTTC	1 cut(s)	282
XspI	CTAG	4 cut(s)	11, 405, 672, 821
ZrmI	AGTACT	2 cut(s)	503, 600
Zsp2I	ATGCAT	1 cut(s)	205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.