Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

49364129 .. 49366699

Gene Structure 2571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG274300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGAATTTGCAACCTGTATCAGTTCTTCTACAAAGCTGGAAGCCTTCAATGACGTACGGCTCGCCGTTTATGCCTAGGTCATCGTCCCAATTGCAACCCTTAAATAAGCACACGCTCACCATGACGTTGCCGGCGGCCTCCGAACTCTCTCCACGCAAATGGAGCCTTCAGTACTCGCATCTGTCACCAGTTCCTGCTCGGCACATAGCTCCTGTTAGCGCAGCCAGGTTTCCATTGCAATGGAGCTGCTTGGAATCACTTGTCCCAGTACTCAGCGCAGCAGCTTGGGCTGTCCAACTGATATCGAGCTTGCTCATGTTCTTCAGGGAGTCTCAAAGCCCTAGATTATTAGACCAAAGACAAAGTAGCGGCTTAGTTCCGCAAGAGGTAGGGAAATCAGGGATGTGCAAACCATTTCTAGATGCTACTCCAACTCATTACACTGTAAAAATAGAGTTATTTTCAAGGGTAAAGAATTTTTGTAAAGAGGATCCATATGAATCAAGAGAGTTTGAAGCTGGAGGATACAAATGGAAACTGGTACTCTACCCAGATGGAAACAAAAGAAGAAATGTGGACGGTCACATCTCTCTCTACTTGGAAATAGCTGGAACAAATTTATTTCAGCCTGGTTGGGAGGTACATGTTGATTTTAGATTGTTCTTGCTTGATCAGCATAAAAGAGTCTACTTGGTTTTTGAAGATGCTTCTACACAGAAAATGTGCTTCAATGGGGATATGCCTTGTGCGGCCGGTTTTGATAAGCTTATCCGCGTTAAAGATTTTACTGATGACTCCAACGGATATCTAGTTGATGACACGTGCATGTTTGGTGCTGATGTCTTTGTCTGTAAAGAAAGGAGAACAGGCAAAGGGGAGTGTCTATCAAGGATCCAGAATCCTTCAACGTACAAGTATGTTTGGAAAATTGATAATTTTTTAAAGACAGATGCCGTATGCCATTGTTCAGGAGCATTCAGTGCTGGAAATCAGAAATGGAAGATAGAACTCCATCCCAAGGGAATTAATATAGGAAAGGGTAGTCATGTTTCTCTGTTTTTTAAACTGGCTGATTCGGAAACCCTTCCTCCTGGCTCTAAAATATATGCAGACTGTACAGTACGCATCCAAGATCAAATTCATTTCAAGCATTATCATGGAAGAGGTAGTGGCAGTTTCCACGCTACAGACACATCTTGGGGTTGGTTTAAATTCATCAAACAAGACACTTTCAGTCAAGCTGGCAATGGGTTTTTGGTGAATGATACTTGCATAGTGGAGGCAGAGGTCACTGTACGTGGAATAACCAGAGCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

439

Amino Acids

49.54

Weight (kDa)

8.79

Isoelectric Point (pI)

49.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	146 - 281	2.3e-32	MATH domain
MATH	PF00917	155 - 282	5.2e-11	MATH domain
MATH_2	PF22486	305 - 430	1.2e-29	MATH domain
MATH	PF00917	322 - 432	1.1e-09	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	687
AccII	CGCG	1 cut(s)	774
AciI	CCGC	5 cut(s)	134, 369, 380, 749, 772
AclWI	GGATC	4 cut(s)	485, 498, 886, 899
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	5 cut(s)	4, 475, 616, 1137, 1211
AcuI	CTGAAG	2 cut(s)	152, 307
AcvI	CACGTG	1 cut(s)	822
AfaI	GTAC	9 cut(s)	56, 173, 270, 543, 642, 911, 1117, 1122, 1296
AfiI	CCNNNNNNNGG	1 cut(s)	1018
AflIII	ACRYGT	2 cut(s)	643, 819
AgsI	TTSAA	7 cut(s)	48, 465, 515, 701, 730, 906, 1147
AjnI	CCWGG	3 cut(s)	224, 628, 1090
AjuI	GAANNNNNNNTTGG	2 cut(s)	1122, 1154
Alw21I	GWGCWC	1 cut(s)	1315
Alw26I	GTCTC	1 cut(s)	336
AlwI	GGATC	4 cut(s)	485, 498, 886, 899
AlwNI	CAGNNNCTG	1 cut(s)	194
AoxI	GGCC	2 cut(s)	135, 750
ApeKI	GCWGC	4 cut(s)	221, 246, 278, 281
ApoI	RAATTY	5 cut(s)	4, 475, 616, 1137, 1211
AseI	ATTAAT	1 cut(s)	1026
Asp700I	GAANNNNTTC	1 cut(s)	1083
AspA2I	CCTAGG	1 cut(s)	74
AspLEI	GCGC	2 cut(s)	221, 278
AsuHPI	GGTGA	3 cut(s)	109, 177, 1270
AvrII	CCTAGG	1 cut(s)	74
BamHI	GGATCC	2 cut(s)	490, 891
BanII	GRGCYC	1 cut(s)	1315
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbrPI	CACGTG	1 cut(s)	822
Bbv12I	GWGCWC	1 cut(s)	1315
BbvI	GCAGC	4 cut(s)	233, 233, 290, 293
BccI	CCATC	2 cut(s)	548, 1020
BceAI	ACGGC	3 cut(s)	49, 73, 938
BciT130I	CCWGG	3 cut(s)	226, 630, 1092
BciVI	GTATCC	1 cut(s)	518
BclI	TGATCA	1 cut(s)	670
BcoDI	GTCTC	1 cut(s)	336
BfaI	CTAG	4 cut(s)	75, 342, 419, 809
BfmI	CTRYAG	1 cut(s)	1185
BfuI	GTATCC	1 cut(s)	518
BisI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 750
BlnI	CCTAGG	1 cut(s)	74
BlsI	GCNGC	7 cut(s)	136, 223, 248, 280, 283, 371, 751
BmcAI	AGTACT	2 cut(s)	173, 270
Bme1390I	CCNGG	3 cut(s)	226, 630, 1092
BmiI	GGNNCC	3 cut(s)	164, 492, 893
BmrFI	CCNGG	3 cut(s)	226, 630, 1092
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	5 cut(s)	187, 412, 694, 940, 1134
BmuI	ACTGGG	1 cut(s)	260
BpmI	CTGGAG	1 cut(s)	540
BsaAI	YACGTR	2 cut(s)	822, 1298
BsaJI	CCNNGG	2 cut(s)	74, 1017
BsaXI	ACNNNNNCTCC	2 cut(s)	1072, 1102
Bsc4I	CCNNNNNNNGG	1 cut(s)	1018
Bse118I	RCCGGY	2 cut(s)	130, 752
Bse1I	ACTGG	4 cut(s)	188, 266, 543, 1071
Bse3DI	GCAATG	3 cut(s)	233, 245, 1252
BseBI	CCWGG	3 cut(s)	226, 630, 1092
BseDI	CCNNGG	2 cut(s)	74, 1017
BseGI	GGATG	3 cut(s)	408, 1012, 1125
BseLI	CCNNNNNNNGG	1 cut(s)	1018
BseMI	GCAATG	3 cut(s)	233, 245, 1252
BseMII	CTCAG	1 cut(s)	286
BseNI	ACTGG	4 cut(s)	188, 266, 543, 1071
BseX3I	CGGCCG	1 cut(s)	750
BseXI	GCAGC	4 cut(s)	233, 233, 290, 293
Bsh1236I	CGCG	1 cut(s)	774
Bsh1285I	CGRYCG	1 cut(s)	753
BshFI	GGCC	2 cut(s)	137, 752
BsiEI	CGRYCG	1 cut(s)	753
BsiHKAI	GWGCWC	1 cut(s)	1315
BsiSI	CCGG	2 cut(s)	131, 753
BsiWI	CGTACG	1 cut(s)	54
BslFI	GGGAC	2 cut(s)	70, 248
BslI	CCNNNNNNNGG	1 cut(s)	1018
BsmAI	GTCTC	1 cut(s)	336
BsmFI	GGGAC	2 cut(s)	70, 248
BsmI	GAATGC	1 cut(s)	974
BsnI	GGCC	2 cut(s)	137, 752
Bsp1286I	GDGCHC	1 cut(s)	1315
Bsp1407I	TGTACA	1 cut(s)	1115
Bsp143I	GATC	4 cut(s)	490, 670, 891, 1132
BspACI	CCGC	5 cut(s)	134, 369, 380, 749, 772
BspANI	GGCC	2 cut(s)	137, 752
BspCNI	CTCAG	1 cut(s)	285
BspFNI	CGCG	1 cut(s)	774
BspLI	GGNNCC	3 cut(s)	164, 492, 893
BspPI	GGATC	4 cut(s)	485, 498, 886, 899
BsrDI	GCAATG	3 cut(s)	233, 245, 1252
BsrFI	RCCGGY	2 cut(s)	130, 752
BsrGI	TGTACA	1 cut(s)	1115
BsrI	ACTGG	4 cut(s)	188, 266, 543, 1071
BssAI	RCCGGY	2 cut(s)	130, 752
BssECI	CCNNGG	2 cut(s)	74, 1017
BssMI	GATC	4 cut(s)	490, 670, 891, 1132
BssT1I	CCWWGG	2 cut(s)	74, 1017
Bst2UI	CCWGG	3 cut(s)	226, 630, 1092
Bst4CI	ACNGT	5 cut(s)	445, 581, 1115, 1120, 1294
Bst6I	CTCTTC	1 cut(s)	1156
BstAPI	GCANNNNNTGC	1 cut(s)	980
BstAUI	TGTACA	1 cut(s)	1115
BstBAI	YACGTR	2 cut(s)	822, 1298
BstC8I	GCNNGC	4 cut(s)	62, 132, 311, 1243
BstDEI	CTNAG	2 cut(s)	272, 373
BstF5I	GGATG	3 cut(s)	408, 1012, 1125
BstFNI	CGCG	1 cut(s)	774
BstHHI	GCGC	2 cut(s)	221, 278
BstKTI	GATC	4 cut(s)	493, 673, 894, 1135
BstMAI	GTCTC	1 cut(s)	336
BstMBI	GATC	4 cut(s)	490, 670, 891, 1132
BstMCI	CGRYCG	1 cut(s)	753
BstMWI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 673, 980
BstNI	CCWGG	3 cut(s)	226, 630, 1092
BstNSI	RCATGY	2 cut(s)	647, 829
BstSCI	CCNGG	3 cut(s)	224, 628, 1090
BstSFI	CTRYAG	1 cut(s)	1185
BstUI	CGCG	1 cut(s)	774
BstV1I	GCAGC	4 cut(s)	233, 233, 290, 293
BstX2I	RGATCY	2 cut(s)	490, 891
BstXI	CCANNNNNNTGG	2 cut(s)	159, 240
BstYI	RGATCY	2 cut(s)	490, 891
BstZI	CGGCCG	1 cut(s)	750
BsuI	GTATCC	1 cut(s)	518
BsuRI	GGCC	2 cut(s)	137, 752
BtsCI	GGATG	3 cut(s)	408, 1012, 1125
BtsIMutI	CAGTG	3 cut(s)	441, 985, 1290
Cac8I	GCNNGC	4 cut(s)	62, 132, 311, 1243
CaiI	CAGNNNCTG	1 cut(s)	194
CfoI	GCGC	2 cut(s)	221, 278
Cfr10I	RCCGGY	2 cut(s)	130, 752
Csp6I	GTAC	9 cut(s)	55, 172, 269, 542, 641, 910, 1116, 1121, 1295
CviAII	CATG	6 cut(s)	121, 316, 644, 826, 1046, 1157
CviQI	GTAC	9 cut(s)	55, 172, 269, 542, 641, 910, 1116, 1121, 1295
DdeI	CTNAG	2 cut(s)	272, 373
DpnI	GATC	4 cut(s)	492, 672, 893, 1134
DpnII	GATC	4 cut(s)	490, 670, 891, 1132
DraI	TTTAAA	3 cut(s)	942, 1063, 1210
EaeI	YGGCCR	1 cut(s)	750
EagI	CGGCCG	1 cut(s)	750
Eam1104I	CTCTTC	1 cut(s)	1156
EarI	CTCTTC	1 cut(s)	1156
Ecl136II	GAGCTC	1 cut(s)	1313
EclXI	CGGCCG	1 cut(s)	750
Eco130I	CCWWGG	2 cut(s)	74, 1017
Eco24I	GRGCYC	1 cut(s)	1315
Eco32I	GATATC	2 cut(s)	303, 806
Eco52I	CGGCCG	1 cut(s)	750
Eco53kI	GAGCTC	1 cut(s)	1313
Eco57I	CTGAAG	2 cut(s)	152, 307
Eco72I	CACGTG	1 cut(s)	822
EcoICRI	GAGCTC	1 cut(s)	1313
EcoRII	CCWGG	3 cut(s)	224, 628, 1090
EcoRV	GATATC	2 cut(s)	303, 806
EcoT14I	CCWWGG	2 cut(s)	74, 1017
EcoT38I	GRGCYC	1 cut(s)	1315
ErhI	CCWWGG	2 cut(s)	74, 1017
FaeI	CATG	6 cut(s)	124, 319, 647, 829, 1049, 1160
FaqI	GGGAC	2 cut(s)	70, 248
FatI	CATG	6 cut(s)	120, 315, 643, 825, 1045, 1156
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	1 cut(s)	670
FblI	GTMKAC	1 cut(s)	687
Fnu4HI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 750
FokI	GGATG	3 cut(s)	415, 999, 1112
FriOI	GRGCYC	1 cut(s)	1315
Fsp4HI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 750
FspBI	CTAG	4 cut(s)	75, 342, 419, 809
GlaI	GCGC	2 cut(s)	220, 277
GluI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 750
GsuI	CTGGAG	1 cut(s)	540
HaeIII	GGCC	2 cut(s)	137, 752
HapII	CCGG	2 cut(s)	131, 753
HhaI	GCGC	2 cut(s)	221, 278
Hin1II	CATG	6 cut(s)	124, 319, 647, 829, 1049, 1160
Hin6I	GCGC	2 cut(s)	219, 276
HinP1I	GCGC	2 cut(s)	219, 276
HindIII	AAGCTT	1 cut(s)	764
HinfI	GANTC	7 cut(s)	254, 329, 500, 684, 794, 898, 1073
HpaII	CCGG	2 cut(s)	131, 753
HphI	GGTGA	3 cut(s)	109, 177, 1270
Hpy166II	GTNNAC	2 cut(s)	577, 688
Hpy188I	TCNGA	3 cut(s)	142, 993, 1078
Hpy188III	TCNNGA	4 cut(s)	419, 504, 895, 969
Hpy8I	GTNNAC	2 cut(s)	577, 688
HpyAV	CCTTC	4 cut(s)	54, 176, 912, 1094
HpyCH4III	ACNGT	5 cut(s)	445, 581, 1115, 1120, 1294
HpyCH4IV	ACGT	5 cut(s)	53, 125, 821, 908, 1297
HpyCH4V	TGCA	7 cut(s)	10, 94, 238, 408, 825, 1109, 1272
HpyF10VI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 673, 980
HpyF3I	CTNAG	2 cut(s)	272, 373
HpySE526I	ACGT	5 cut(s)	53, 125, 821, 908, 1297
Hsp92II	CATG	6 cut(s)	124, 319, 647, 829, 1049, 1160
HspAI	GCGC	2 cut(s)	219, 276
KroI	GCCGGC	1 cut(s)	130
KroNI	GCCGGC	1 cut(s)	132
Ksp22I	TGATCA	1 cut(s)	670
Kzo9I	GATC	4 cut(s)	490, 670, 891, 1132
LmnI	GCTCC	4 cut(s)	162, 214, 243, 971
Lsp1109I	GCAGC	4 cut(s)	233, 233, 290, 293
LweI	GCATC	5 cut(s)	187, 412, 694, 940, 1134
MaeI	CTAG	4 cut(s)	75, 342, 419, 809
MaeII	ACGT	5 cut(s)	53, 125, 821, 908, 1297
MaeIII	GTNAC	3 cut(s)	183, 581, 1288
MalI	GATC	4 cut(s)	492, 672, 893, 1134
MboI	GATC	4 cut(s)	490, 670, 891, 1132
MboII	GAAGA	6 cut(s)	17, 313, 579, 713, 1012, 1173
MfeI	CAATTG	1 cut(s)	89
MflI	RGATCY	2 cut(s)	490, 891
MhlI	GDGCHC	1 cut(s)	1315
MluCI	AATT	9 cut(s)	4, 89, 475, 616, 927, 934, 1023, 1137, 1211
MlyI	GAGTC	3 cut(s)	338, 693, 788
MmeI	TCCRAC	3 cut(s)	319, 455, 822
MnlI	CCTC	9 cut(s)	148, 379, 481, 515, 631, 1098, 1157, 1273, 1279
MroNI	GCCGGC	1 cut(s)	130
MroXI	GAANNNNTTC	1 cut(s)	1083
MseI	TTAA	6 cut(s)	101, 777, 941, 1026, 1062, 1209
MslI	CAYNNNNRTG	4 cut(s)	157, 238, 824, 1155
MspI	CCGG	2 cut(s)	131, 753
MspR9I	CCNGG	3 cut(s)	226, 630, 1092
MunI	CAATTG	1 cut(s)	89
Mva1269I	GAATGC	1 cut(s)	974
MvaI	CCWGG	3 cut(s)	226, 630, 1092
MvnI	CGCG	1 cut(s)	774
MwoI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 673, 980
NaeI	GCCGGC	1 cut(s)	132
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	4 cut(s)	490, 670, 891, 1132
NgoMIV	GCCGGC	1 cut(s)	130
NlaIII	CATG	6 cut(s)	124, 319, 647, 829, 1049, 1160
NlaIV	GGNNCC	3 cut(s)	164, 492, 893
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	3 cut(s)	183, 581, 1288
NspI	RCATGY	2 cut(s)	647, 829
PciI	ACATGT	1 cut(s)	643
PctI	GAATGC	1 cut(s)	974
PdiI	GCCGGC	1 cut(s)	132
PdmI	GAANNNNTTC	1 cut(s)	1083
PfeI	GAWTC	4 cut(s)	254, 500, 898, 1073
Pfl23II	CGTACG	1 cut(s)	54
PkrI	GCNGC	7 cut(s)	136, 223, 248, 280, 283, 371, 751
PleI	GAGTC	3 cut(s)	337, 692, 788
PmaCI	CACGTG	1 cut(s)	822
PmlI	CACGTG	1 cut(s)	822
PpsI	GAGTC	3 cut(s)	337, 692, 788
Ppu21I	YACGTR	2 cut(s)	822, 1298
PscI	ACATGT	1 cut(s)	643
PshBI	ATTAAT	1 cut(s)	1026
Psp124BI	GAGCTC	1 cut(s)	1315
Psp6I	CCWGG	3 cut(s)	224, 628, 1090
PspCI	CACGTG	1 cut(s)	822
PspGI	CCWGG	3 cut(s)	224, 628, 1090
PspLI	CGTACG	1 cut(s)	54
PspN4I	GGNNCC	3 cut(s)	164, 492, 893
PstNI	CAGNNNCTG	1 cut(s)	194
PsuI	RGATCY	2 cut(s)	490, 891
RsaI	GTAC	9 cut(s)	56, 173, 270, 543, 642, 911, 1117, 1122, 1296
RsaNI	GTAC	9 cut(s)	55, 172, 269, 542, 641, 910, 1116, 1121, 1295
RseI	CAYNNNNRTG	4 cut(s)	157, 238, 824, 1155
SacI	GAGCTC	1 cut(s)	1315
SaqAI	TTAA	6 cut(s)	101, 777, 941, 1026, 1062, 1209
SatI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 750
Sau3AI	GATC	4 cut(s)	490, 670, 891, 1132
ScaI	AGTACT	2 cut(s)	173, 270
SchI	GAGTC	3 cut(s)	338, 693, 788
ScrFI	CCNGG	3 cut(s)	226, 630, 1092
SduI	GDGCHC	1 cut(s)	1315
SfaNI	GCATC	5 cut(s)	187, 412, 694, 940, 1134
SfcI	CTRYAG	1 cut(s)	1185
SmiMI	CAYNNNNRTG	4 cut(s)	157, 238, 824, 1155
Sse9I	AATT	9 cut(s)	4, 89, 475, 616, 927, 934, 1023, 1137, 1211
SsiI	CCGC	5 cut(s)	134, 369, 380, 749, 772
SspMI	CTAG	4 cut(s)	75, 342, 419, 809
SstI	GAGCTC	1 cut(s)	1315
StyD4I	CCNGG	3 cut(s)	224, 628, 1090
StyI	CCWWGG	2 cut(s)	74, 1017
TaaI	ACNGT	5 cut(s)	445, 581, 1115, 1120, 1294
TaiI	ACGT	5 cut(s)	56, 128, 824, 911, 1300
TaqI	TCGA	1 cut(s)	305
TasI	AATT	9 cut(s)	4, 89, 475, 616, 927, 934, 1023, 1137, 1211
TatI	WGTACW	3 cut(s)	171, 268, 1115
TauI	GCSGC	3 cut(s)	137, 372, 752
TfiI	GAWTC	4 cut(s)	254, 500, 898, 1073
Tru1I	TTAA	6 cut(s)	101, 777, 941, 1026, 1062, 1209
Tru9I	TTAA	6 cut(s)	101, 777, 941, 1026, 1062, 1209
TscAI	CASTG	3 cut(s)	448, 985, 1297
TseFI	GTSAC	3 cut(s)	183, 581, 1288
TseI	GCWGC	4 cut(s)	221, 246, 278, 281
Tsp45I	GTSAC	3 cut(s)	183, 581, 1288
TspDTI	ATGAA	4 cut(s)	17, 513, 1130, 1204
TspGWI	ACGGA	1 cut(s)	816
TspRI	CASTG	3 cut(s)	448, 985, 1297
VspI	ATTAAT	1 cut(s)	1026
XapI	RAATTY	5 cut(s)	4, 475, 616, 1137, 1211
XbaI	TCTAGA	1 cut(s)	418
XceI	RCATGY	2 cut(s)	647, 829
XmaJI	CCTAGG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	687
XmnI	GAANNNNTTC	1 cut(s)	1083
XspI	CTAG	4 cut(s)	75, 342, 419, 809
ZrmI	AGTACT	2 cut(s)	173, 270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.