Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0000185

Physical Location & Seq

Genomic Coordinates Forward (+)

45061492 .. 45078922

Gene Structure 17431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG277100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGAATTTGCAACCTGTATCAGTTCTTCTACAAAGCTGGAAGCCTCCAATGACGTACGGCTCGCCGTTTATGCCTAGGTCATCGTCCCAATTGCAACCCTTAAATAAGCACACGCTCACCATGACGTTGCCGGCGGCCTCCGAACTCTCTCCACGCAAATGGAGCCTTCAGTACTCGCATCTGTCACCAGTTCCTGCTCGGCACATAGCTCCTGTTAGCGCAGCCAGGTTGCCATTGCAATCGAGCTGCTTGGAATCACTTGTCCCAGTACTCAGCGCAGCAGCTTGGGCAGTCCAGCTGATATCGAGCTTGCTCATGTTCTTCAGGGAGTCTCAAAGCCCTAGATTATTAGACCAAAGACAAAGTAGCGGCTTAGTTCCGCAAGAGGTAGGGAAATCAGGGATGTGCAAACCATTTCTAGATGCTACTCCAACTCATTACACTGTAAAAATAGAGTTATATAACTCTATATTTTCAAGGCTAAAGAATTTTTGTGAAGAGGATCCCTATGAATCAAGAGAGTTTGAAGCTGGAGGATACAAATGGAAACTGGTACTCTACCCAGATGGAAACAAGAGAAGAAATGTGGAAGGTCACATCTCTCTCTACTTGGAAATAGCTGGAACAAATTTATTTCAGCCTGGTTGGGAGGTACATGTTGATTTTAGATTGTTCTTGCTTGATCAGCATAGAAGAGTCTACTTGGTTTTTGAAGATGCTTCTACACAGAAAATGTGCTTCAATGGAGATATGCCTTGTGCGGCCGGTTTTGATAAGCTTATCAGTGTTAAAGATTTTACTGATGACTCCAACGGATATCTAGTTGATGACACGTGCGTGTTTGGTGCTGAGGTCTTTGTCTGTAAAGAAAGGAGAACAGGCAAAGGAGAGTGTCTATCAAGGATCCAGAATCCTTCAACGTACAAGTATGTTTGGAAAATTGATAATTTTTTAAAGACAGATGCCGTATGCCATTGTTCAGAAGCATTCAGTGCTGGAAATCAGAAATGGAAGATAGAACTCTATCCCAAGGGAATTAATAAAGGAAAGGGTAGTCATGTTTCTCTGTTTTTTAAACTGGCTAATCCGGAAACCCTTCCTCCTGGCTCTAAAATATATGCAGACTGTACACTACGCATCCAAGATCAAATTCATTTCAAGCATGATCATGGAAGAGGTAGTGGCAGTTTCCACGCTACAGACACATCTTGGGGTTGGTTTAAATTCATCAAACAAGACACTTTCAGTCAAGCAGGCAATGGGTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

423

Amino Acids

47.88

Weight (kDa)

8.63

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	146 - 285	1.1e-30	MATH domain
MATH	PF00917	158 - 287	6.7e-12	MATH domain
MATH_2	PF22486	309 - 422	2.7e-24	MATH domain
MATH	PF00917	326 - 416	1.3e-06	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17380
fragaria_vesca	FvH4_4g21140 FvH4_4g21140 FvH4_4g21190 FvH4_4g21293 FvH4_4g21321 FvH4_4g21321 FvH4_4g21321 FvH4_4g21850 FvH4_6g51410 FvH4_7g09650
malus_domestica	MD07G1100800.v1.1 MD13G1142200.v1.1 MD13G1142800.v1.1 MD13G1142900.v1.1 MD13G1143000.v1.1 MD13G1143200.v1.1 MD13G1143500.v1.1 MD13G1144900.v1.1 MD13G1145100.v1.1 MD13G1145600.v1.1 MD16G1132700.v1.1 MD16G1132900.v1.1 MD16G1138600.v1.1 MD16G1138800.v1.1 MD16G1146500.v1.1
prunus_persica	Prupe.1G107200_v2.0.a1 Prupe.1G107200_v2.0.a1 Prupe.1G107400_v2.0.a1 Prupe.1G107500_v2.0.a1 Prupe.1G107700_v2.0.a1 Prupe.1G107800_v2.0.a1 Prupe.1G107900_v2.0.a1 Prupe.1G108000_v2.0.a1 Prupe.2G123800_v2.0.a1 Prupe.7G081500_v2.0.a1 Prupe.7G081600_v2.0.a1 Prupe.7G081700_v2.0.a1
pyrus_communis	pycom13g12350 pycom13g12370 pycom13g12380 pycom13g12390 pycom13g12400 pycom13g12440 pycom16g12300
rosa_chinensis	RchiOBHm_Chr1g0346551 RchiOBHm_Chr1g0378981 RchiOBHm_Chr4g0402791 RchiOBHm_Chr4g0410831 RchiOBHm_Chr4g0426731 RchiOBHm_Chr4g0426761 RchiOBHm_Chr4g0426771 RchiOBHm_Chr4g0426801 RchiOBHm_Chr4g0426981 RchiOBHm_Chr4g0427031 RchiOBHm_Chr4g0427041 RchiOBHm_Chr4g0427051 RchiOBHm_Chr4g0427071 RchiOBHm_Chr4g0427081 RchiOBHm_Chr4g0428091 RchiOBHm_Chr4g0428111 RchiOBHm_Chr5g0048271
rosa_laevigata	RLG00000007181 RLG00000007182 RLG00000007233 RLG00000007236 RLG00000007239 RLG00000007263 RLG00000007264 RLG00000007265 RLG00000007269 RLG00000007277 RLG00000007278 RLG00000007279 RLG00000007282 RLG00000028794
rosa_multiflora	Rmu_co8499169.1_g000001 Rmu_sc0000953.1_g000004 Rmu_sc0000953.1_g000009 Rmu_sc0000953.1_g000010 Rmu_sc0000953.1_g000016 Rmu_sc0000953.1_g000021 Rmu_sc0000953.1_g000028 Rmu_sc0000953.1_g000029 Rmu_sc0001734.1_g000009 Rmu_sc0002091.1_g000024 Rmu_sc0004940.1_g000016 Rmu_sc0009599.1_g000017 Rmu_sc0010934.1_g000001 Rmu_sc0013367.1_g000001
rosa_roxburghii	Rroxscaffold_4G00308240 Rroxscaffold_5G00368720 Rroxscaffold_5G00368730 Rroxscaffold_5G00368760 Rroxscaffold_5G00368770 Rroxscaffold_5G00368870 Rroxscaffold_5G00368900 Rroxscaffold_5G00368910 Rroxscaffold_5G00369810 Rroxscaffold_5G00369820
rosa_rugosa	Rorug01G0181000 Rorug04G0208500 Rorug04G0214500 Rorug04G0214700 Rorug04G0214800 Rorug04G0214900 Rorug04G0215400 Rorug04G0215600 Rorug04G0215700 Rorug04G0215800 Rorug04G0218400 Rorug04G0222200 Rorug04G0222300
rosa_samantha	Rh1AG200200 Rh1BG166500 Rh1CG185200 Rh1DG197300 Rh4AG264300 Rh4AG269500 Rh4AG269800 Rh4AG269900 Rh4AG270800 Rh4AG271300 Rh4AG271400 Rh4AG271600 Rh4AG279600 Rh4BG275800 Rh4BG276100 Rh4BG276200 Rh4BG277100 Rh4BG277400 Rh4BG277500 Rh4BG285000 Rh4CG290400 Rh4CG290700 Rh4CG290800 Rh4CG290900 Rh4CG291800 Rh4CG292100 Rh4CG292200 Rh4DG272800 Rh4DG273100 Rh4DG273200 Rh4DG273400 Rh4DG274300 Rh4DG274900 Rh4DG275000 Rh4DG282100 Rh7AG411500
rosa_wichuraiana	Rw0G012470 Rw1G016770 Rw2G005260 Rw4G023380 Rw4G023410 Rw4G023420 Rw4G023510 Rw4G023530 Rw4G023540 Rw4G023550 Rw4G023560 Rw4G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	699
AccIII	TCCGGA	1 cut(s)	1087
AciI	CCGC	4 cut(s)	134, 369, 380, 761
AclWI	GGATC	4 cut(s)	497, 510, 898, 911
AcoI	YGGCCR	1 cut(s)	762
AcsI	RAATTY	5 cut(s)	4, 487, 628, 1149, 1223
AcuI	CTGAAG	2 cut(s)	152, 307
AcvI	CACGTG	1 cut(s)	834
AfaI	GTAC	7 cut(s)	56, 173, 270, 555, 654, 923, 1129
AflIII	ACRYGT	2 cut(s)	655, 831
AgsI	TTSAA	6 cut(s)	477, 527, 713, 742, 918, 1159
AjnI	CCWGG	3 cut(s)	224, 640, 1102
AjuI	GAANNNNNNNTTGG	2 cut(s)	1134, 1166
AleI	CACNNNNGTG	1 cut(s)	836
AluBI	AGCT	9 cut(s)	36, 209, 246, 284, 298, 309, 530, 620, 778
AluI	AGCT	9 cut(s)	36, 209, 246, 284, 298, 309, 530, 620, 778
Alw26I	GTCTC	1 cut(s)	336
AlwI	GGATC	4 cut(s)	497, 510, 898, 911
AlwNI	CAGNNNCTG	1 cut(s)	194
Aor13HI	TCCGGA	1 cut(s)	1087
AoxI	GGCC	2 cut(s)	135, 762
ApeKI	GCWGC	4 cut(s)	221, 246, 278, 281
ApoI	RAATTY	5 cut(s)	4, 487, 628, 1149, 1223
AseI	ATTAAT	1 cut(s)	1038
Asp700I	GAANNNNTTC	1 cut(s)	1095
AspA2I	CCTAGG	1 cut(s)	74
AspLEI	GCGC	2 cut(s)	221, 278
AsuHPI	GGTGA	2 cut(s)	109, 177
AvrII	CCTAGG	1 cut(s)	74
BamHI	GGATCC	2 cut(s)	502, 903
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbrPI	CACGTG	1 cut(s)	834
BbvCI	CCTCAGC	1 cut(s)	849
BbvI	GCAGC	4 cut(s)	233, 233, 290, 293
BccI	CCATC	1 cut(s)	560
BceAI	ACGGC	3 cut(s)	49, 73, 950
BciT130I	CCWGG	3 cut(s)	226, 642, 1104
BciVI	GTATCC	1 cut(s)	530
BclI	TGATCA	2 cut(s)	682, 1165
BcoDI	GTCTC	1 cut(s)	336
BfaI	CTAG	4 cut(s)	75, 342, 419, 821
BfmI	CTRYAG	1 cut(s)	1197
BfuI	GTATCC	1 cut(s)	530
BisI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 762
BlnI	CCTAGG	1 cut(s)	74
BlsI	GCNGC	7 cut(s)	136, 223, 248, 280, 283, 371, 763
BmcAI	AGTACT	2 cut(s)	173, 270
Bme1390I	CCNGG	3 cut(s)	226, 642, 1104
BmiI	GGNNCC	3 cut(s)	164, 504, 905
BmrFI	CCNGG	3 cut(s)	226, 642, 1104
BmrI	ACTGGG	1 cut(s)	260
BmsI	GCATC	5 cut(s)	187, 412, 706, 952, 1146
BmuI	ACTGGG	1 cut(s)	260
BpmI	CTGGAG	1 cut(s)	552
Bpu10I	CCTNAGC	1 cut(s)	849
BsaAI	YACGTR	1 cut(s)	834
BsaJI	CCNNGG	2 cut(s)	74, 1029
BsaWI	WCCGGW	1 cut(s)	1087
BsaXI	ACNNNNNCTCC	2 cut(s)	1084, 1114
Bse118I	RCCGGY	2 cut(s)	130, 764
Bse1I	ACTGG	4 cut(s)	188, 266, 555, 1083
Bse3DI	GCAATG	2 cut(s)	233, 1264
BseAI	TCCGGA	1 cut(s)	1087
BseBI	CCWGG	3 cut(s)	226, 642, 1104
BseDI	CCNNGG	2 cut(s)	74, 1029
BseGI	GGATG	2 cut(s)	408, 1137
BseMI	GCAATG	2 cut(s)	233, 1264
BseMII	CTCAG	2 cut(s)	286, 840
BseNI	ACTGG	4 cut(s)	188, 266, 555, 1083
BseX3I	CGGCCG	1 cut(s)	762
BseXI	GCAGC	4 cut(s)	233, 233, 290, 293
Bsh1285I	CGRYCG	1 cut(s)	765
BshFI	GGCC	2 cut(s)	137, 764
BsiEI	CGRYCG	1 cut(s)	765
BsiSI	CCGG	3 cut(s)	131, 765, 1088
BsiWI	CGTACG	1 cut(s)	54
BslFI	GGGAC	2 cut(s)	70, 248
BsmAI	GTCTC	1 cut(s)	336
BsmFI	GGGAC	2 cut(s)	70, 248
BsmI	GAATGC	1 cut(s)	986
BsnI	GGCC	2 cut(s)	137, 764
Bsp13I	TCCGGA	1 cut(s)	1087
Bsp1407I	TGTACA	1 cut(s)	1127
Bsp143I	GATC	5 cut(s)	502, 682, 903, 1144, 1165
BspACI	CCGC	4 cut(s)	134, 369, 380, 761
BspANI	GGCC	2 cut(s)	137, 764
BspCNI	CTCAG	2 cut(s)	285, 841
BspEI	TCCGGA	1 cut(s)	1087
BspLI	GGNNCC	3 cut(s)	164, 504, 905
BspPI	GGATC	4 cut(s)	497, 510, 898, 911
BsrDI	GCAATG	2 cut(s)	233, 1264
BsrFI	RCCGGY	2 cut(s)	130, 764
BsrGI	TGTACA	1 cut(s)	1127
BsrI	ACTGG	4 cut(s)	188, 266, 555, 1083
BssAI	RCCGGY	2 cut(s)	130, 764
BssECI	CCNNGG	2 cut(s)	74, 1029
BssMI	GATC	5 cut(s)	502, 682, 903, 1144, 1165
BssT1I	CCWWGG	2 cut(s)	74, 1029
Bst2UI	CCWGG	3 cut(s)	226, 642, 1104
Bst4CI	ACNGT	2 cut(s)	445, 1127
Bst6I	CTCTTC	3 cut(s)	492, 688, 1168
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstAUI	TGTACA	1 cut(s)	1127
BstBAI	YACGTR	1 cut(s)	834
BstC8I	GCNNGC	4 cut(s)	62, 132, 311, 1255
BstDEI	CTNAG	3 cut(s)	272, 373, 849
BstF5I	GGATG	2 cut(s)	408, 1137
BstHHI	GCGC	2 cut(s)	221, 278
BstKTI	GATC	5 cut(s)	505, 685, 906, 1147, 1168
BstMAI	GTCTC	1 cut(s)	336
BstMBI	GATC	5 cut(s)	502, 682, 903, 1144, 1165
BstMCI	CGRYCG	1 cut(s)	765
BstMWI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 685, 992
BstNI	CCWGG	3 cut(s)	226, 642, 1104
BstNSI	RCATGY	1 cut(s)	659
BstSCI	CCNGG	3 cut(s)	224, 640, 1102
BstSFI	CTRYAG	1 cut(s)	1197
BstV1I	GCAGC	4 cut(s)	233, 233, 290, 293
BstX2I	RGATCY	2 cut(s)	502, 903
BstXI	CCANNNNNNTGG	1 cut(s)	159
BstYI	RGATCY	2 cut(s)	502, 903
BstZI	CGGCCG	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	530
BsuRI	GGCC	2 cut(s)	137, 764
BtsCI	GGATG	2 cut(s)	408, 1137
BtsIMutI	CAGTG	3 cut(s)	441, 790, 997
Cac8I	GCNNGC	4 cut(s)	62, 132, 311, 1255
CaiI	CAGNNNCTG	1 cut(s)	194
CfoI	GCGC	2 cut(s)	221, 278
Cfr10I	RCCGGY	2 cut(s)	130, 764
Csp6I	GTAC	7 cut(s)	55, 172, 269, 554, 653, 922, 1128
CviAII	CATG	6 cut(s)	121, 316, 656, 1058, 1163, 1169
CviQI	GTAC	7 cut(s)	55, 172, 269, 554, 653, 922, 1128
DdeI	CTNAG	3 cut(s)	272, 373, 849
DpnI	GATC	5 cut(s)	504, 684, 905, 1146, 1167
DpnII	GATC	5 cut(s)	502, 682, 903, 1144, 1165
DraI	TTTAAA	3 cut(s)	954, 1075, 1222
EaeI	YGGCCR	1 cut(s)	762
EagI	CGGCCG	1 cut(s)	762
Eam1104I	CTCTTC	3 cut(s)	492, 688, 1168
EarI	CTCTTC	3 cut(s)	492, 688, 1168
EclXI	CGGCCG	1 cut(s)	762
Eco130I	CCWWGG	2 cut(s)	74, 1029
Eco32I	GATATC	2 cut(s)	303, 818
Eco52I	CGGCCG	1 cut(s)	762
Eco57I	CTGAAG	2 cut(s)	152, 307
Eco72I	CACGTG	1 cut(s)	834
EcoRII	CCWGG	3 cut(s)	224, 640, 1102
EcoRV	GATATC	2 cut(s)	303, 818
EcoT14I	CCWWGG	2 cut(s)	74, 1029
ErhI	CCWWGG	2 cut(s)	74, 1029
FaeI	CATG	6 cut(s)	124, 319, 659, 1061, 1166, 1172
FaqI	GGGAC	2 cut(s)	70, 248
FatI	CATG	6 cut(s)	120, 315, 655, 1057, 1162, 1168
FbaI	TGATCA	2 cut(s)	682, 1165
FblI	GTMKAC	1 cut(s)	699
Fnu4HI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 762
FokI	GGATG	2 cut(s)	415, 1124
Fsp4HI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 762
FspBI	CTAG	4 cut(s)	75, 342, 419, 821
GlaI	GCGC	2 cut(s)	220, 277
GluI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 762
GsuI	CTGGAG	1 cut(s)	552
HaeIII	GGCC	2 cut(s)	137, 764
HapII	CCGG	3 cut(s)	131, 765, 1088
HhaI	GCGC	2 cut(s)	221, 278
Hin1II	CATG	6 cut(s)	124, 319, 659, 1061, 1166, 1172
Hin6I	GCGC	2 cut(s)	219, 276
HinP1I	GCGC	2 cut(s)	219, 276
HindIII	AAGCTT	1 cut(s)	776
HinfI	GANTC	6 cut(s)	254, 329, 512, 696, 806, 910
HpaII	CCGG	3 cut(s)	131, 765, 1088
HphI	GGTGA	2 cut(s)	109, 177
Hpy166II	GTNNAC	2 cut(s)	700, 1130
Hpy188I	TCNGA	3 cut(s)	142, 982, 1005
Hpy188III	TCNNGA	4 cut(s)	419, 516, 907, 1088
Hpy8I	GTNNAC	2 cut(s)	700, 1130
HpyAV	CCTTC	4 cut(s)	176, 584, 924, 1106
HpyCH4III	ACNGT	2 cut(s)	445, 1127
HpyCH4IV	ACGT	4 cut(s)	53, 125, 833, 920
HpyCH4V	TGCA	5 cut(s)	10, 94, 238, 408, 1121
HpyF10VI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 685, 992
HpyF3I	CTNAG	3 cut(s)	272, 373, 849
HpySE526I	ACGT	4 cut(s)	53, 125, 833, 920
Hsp92II	CATG	6 cut(s)	124, 319, 659, 1061, 1166, 1172
HspAI	GCGC	2 cut(s)	219, 276
Kpn2I	TCCGGA	1 cut(s)	1087
KroI	GCCGGC	1 cut(s)	130
KroNI	GCCGGC	1 cut(s)	132
Ksp22I	TGATCA	2 cut(s)	682, 1165
Kzo9I	GATC	5 cut(s)	502, 682, 903, 1144, 1165
LmnI	GCTCC	2 cut(s)	162, 214
Lsp1109I	GCAGC	4 cut(s)	233, 233, 290, 293
LweI	GCATC	5 cut(s)	187, 412, 706, 952, 1146
MaeI	CTAG	4 cut(s)	75, 342, 419, 821
MaeII	ACGT	4 cut(s)	53, 125, 833, 920
MaeIII	GTNAC	2 cut(s)	183, 593
MalI	GATC	5 cut(s)	504, 684, 905, 1146, 1167
MboI	GATC	5 cut(s)	502, 682, 903, 1144, 1165
MboII	GAAGA	8 cut(s)	17, 313, 509, 591, 705, 725, 1024, 1185
MfeI	CAATTG	1 cut(s)	89
MflI	RGATCY	2 cut(s)	502, 903
MluCI	AATT	9 cut(s)	4, 89, 487, 628, 939, 946, 1035, 1149, 1223
MlyI	GAGTC	3 cut(s)	338, 705, 800
MmeI	TCCRAC	2 cut(s)	455, 834
MnlI	CCTC	9 cut(s)	54, 148, 379, 493, 527, 643, 844, 1110, 1169
MroI	TCCGGA	1 cut(s)	1087
MroNI	GCCGGC	1 cut(s)	130
MroXI	GAANNNNTTC	1 cut(s)	1095
MseI	TTAA	6 cut(s)	101, 789, 953, 1038, 1074, 1221
MslI	CAYNNNNRTG	3 cut(s)	157, 836, 1167
MspA1I	CMGCKG	1 cut(s)	298
MspI	CCGG	3 cut(s)	131, 765, 1088
MspR9I	CCNGG	3 cut(s)	226, 642, 1104
MunI	CAATTG	1 cut(s)	89
Mva1269I	GAATGC	1 cut(s)	986
MvaI	CCWGG	3 cut(s)	226, 642, 1104
MwoI	GCNNNNNNNGC	5 cut(s)	70, 162, 287, 685, 992
NaeI	GCCGGC	1 cut(s)	132
NdeII	GATC	5 cut(s)	502, 682, 903, 1144, 1165
NgoMIV	GCCGGC	1 cut(s)	130
NlaIII	CATG	6 cut(s)	124, 319, 659, 1061, 1166, 1172
NlaIV	GGNNCC	3 cut(s)	164, 504, 905
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	2 cut(s)	183, 593
NspI	RCATGY	1 cut(s)	659
OliI	CACNNNNGTG	1 cut(s)	836
PciI	ACATGT	1 cut(s)	655
PctI	GAATGC	1 cut(s)	986
PdiI	GCCGGC	1 cut(s)	132
PdmI	GAANNNNTTC	1 cut(s)	1095
PfeI	GAWTC	3 cut(s)	254, 512, 910
Pfl23II	CGTACG	1 cut(s)	54
PkrI	GCNGC	7 cut(s)	136, 223, 248, 280, 283, 371, 763
PleI	GAGTC	3 cut(s)	337, 704, 800
PmaCI	CACGTG	1 cut(s)	834
PmlI	CACGTG	1 cut(s)	834
PpsI	GAGTC	3 cut(s)	337, 704, 800
Ppu21I	YACGTR	1 cut(s)	834
PscI	ACATGT	1 cut(s)	655
PshBI	ATTAAT	1 cut(s)	1038
Psp6I	CCWGG	3 cut(s)	224, 640, 1102
PspCI	CACGTG	1 cut(s)	834
PspGI	CCWGG	3 cut(s)	224, 640, 1102
PspLI	CGTACG	1 cut(s)	54
PspN4I	GGNNCC	3 cut(s)	164, 504, 905
PstNI	CAGNNNCTG	1 cut(s)	194
PsuI	RGATCY	2 cut(s)	502, 903
PvuII	CAGCTG	1 cut(s)	298
RsaI	GTAC	7 cut(s)	56, 173, 270, 555, 654, 923, 1129
RsaNI	GTAC	7 cut(s)	55, 172, 269, 554, 653, 922, 1128
RseI	CAYNNNNRTG	3 cut(s)	157, 836, 1167
SaqAI	TTAA	6 cut(s)	101, 789, 953, 1038, 1074, 1221
SatI	GCNGC	7 cut(s)	135, 222, 247, 279, 282, 370, 762
Sau3AI	GATC	5 cut(s)	502, 682, 903, 1144, 1165
ScaI	AGTACT	2 cut(s)	173, 270
SchI	GAGTC	3 cut(s)	338, 705, 800
ScrFI	CCNGG	3 cut(s)	226, 642, 1104
SfaNI	GCATC	5 cut(s)	187, 412, 706, 952, 1146
SfcI	CTRYAG	1 cut(s)	1197
SmiMI	CAYNNNNRTG	3 cut(s)	157, 836, 1167
Sse9I	AATT	9 cut(s)	4, 89, 487, 628, 939, 946, 1035, 1149, 1223
SsiI	CCGC	4 cut(s)	134, 369, 380, 761
SspMI	CTAG	4 cut(s)	75, 342, 419, 821
StyD4I	CCNGG	3 cut(s)	224, 640, 1102
StyI	CCWWGG	2 cut(s)	74, 1029
TaaI	ACNGT	2 cut(s)	445, 1127
TaiI	ACGT	4 cut(s)	56, 128, 836, 923
TaqI	TCGA	2 cut(s)	242, 305
TasI	AATT	9 cut(s)	4, 89, 487, 628, 939, 946, 1035, 1149, 1223
TatI	WGTACW	3 cut(s)	171, 268, 1127
TauI	GCSGC	3 cut(s)	137, 372, 764
TfiI	GAWTC	3 cut(s)	254, 512, 910
Tru1I	TTAA	6 cut(s)	101, 789, 953, 1038, 1074, 1221
Tru9I	TTAA	6 cut(s)	101, 789, 953, 1038, 1074, 1221
TscAI	CASTG	3 cut(s)	448, 790, 997
TseFI	GTSAC	2 cut(s)	183, 593
TseI	GCWGC	4 cut(s)	221, 246, 278, 281
Tsp45I	GTSAC	2 cut(s)	183, 593
TspDTI	ATGAA	4 cut(s)	17, 525, 1142, 1216
TspGWI	ACGGA	1 cut(s)	828
TspRI	CASTG	3 cut(s)	448, 790, 997
VspI	ATTAAT	1 cut(s)	1038
XapI	RAATTY	5 cut(s)	4, 487, 628, 1149, 1223
XbaI	TCTAGA	1 cut(s)	418
XceI	RCATGY	1 cut(s)	659
XmaJI	CCTAGG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	699
XmnI	GAANNNNTTC	1 cut(s)	1095
XspI	CTAG	4 cut(s)	75, 342, 419, 821
ZrmI	AGTACT	2 cut(s)	173, 270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.