Ubiquitin carboxyl-terminal hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 230 |
| Acc36I | ACCTGC | 1 cut(s) | 969 |
| AccI | GTMKAC | 1 cut(s) | 222 |
| AclWI | GGATC | 1 cut(s) | 659 |
| AcoI | YGGCCR | 1 cut(s) | 1053 |
| AcsI | RAATTY | 3 cut(s) | 407, 560, 836 |
| AcuI | CTGAAG | 2 cut(s) | 236, 630 |
| AfaI | GTAC | 4 cut(s) | 176, 317, 536, 633 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 16 |
| AgsI | TTSAA | 7 cut(s) | 329, 557, 567, 574, 779, 871, 991 |
| AjnI | CCWGG | 2 cut(s) | 495, 1055 |
| AluBI | AGCT | 3 cut(s) | 101, 391, 461 |
| AluI | AGCT | 3 cut(s) | 101, 391, 461 |
| Alw21I | GWGCWC | 1 cut(s) | 1038 |
| AlwI | GGATC | 1 cut(s) | 659 |
| AoxI | GGCC | 2 cut(s) | 493, 1053 |
| ApoI | RAATTY | 3 cut(s) | 407, 560, 836 |
| AspLEI | GCGC | 1 cut(s) | 231 |
| AspS9I | GGNCC | 1 cut(s) | 19 |
| AsuHPI | GGTGA | 2 cut(s) | 712, 827 |
| AsuII | TTCGAA | 1 cut(s) | 141 |
| AsuNHI | GCTAGC | 1 cut(s) | 97 |
| AvaII | GGWCC | 1 cut(s) | 19 |
| BalI | TGGCCA | 1 cut(s) | 1055 |
| BanII | GRGCYC | 1 cut(s) | 527 |
| BbsI | GAAGAC | 1 cut(s) | 213 |
| Bbv12I | GWGCWC | 1 cut(s) | 1038 |
| BbvCI | CCTCAGC | 1 cut(s) | 462 |
| BccI | CCATC | 1 cut(s) | 20 |
| BciT130I | CCWGG | 2 cut(s) | 497, 1057 |
| BciVI | GTATCC | 1 cut(s) | 146 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BfmI | CTRYAG | 1 cut(s) | 627 |
| BfuAI | ACCTGC | 1 cut(s) | 969 |
| BfuI | GTATCC | 1 cut(s) | 146 |
| BmcAI | AGTACT | 1 cut(s) | 633 |
| Bme1390I | CCNGG | 2 cut(s) | 497, 1057 |
| Bme18I | GGWCC | 1 cut(s) | 19 |
| BmgT120I | GGNCC | 1 cut(s) | 19 |
| BmiI | GGNNCC | 1 cut(s) | 983 |
| BmrFI | CCNGG | 2 cut(s) | 497, 1057 |
| BmrI | ACTGGG | 2 cut(s) | 631, 969 |
| BmsI | GCATC | 1 cut(s) | 322 |
| BmtI | GCTAGC | 1 cut(s) | 101 |
| BmuI | ACTGGG | 2 cut(s) | 631, 969 |
| BpiI | GAAGAC | 1 cut(s) | 213 |
| Bpu10I | CCTNAGC | 1 cut(s) | 462 |
| Bpu14I | TTCGAA | 1 cut(s) | 141 |
| Bsa29I | ATCGAT | 1 cut(s) | 438 |
| BsaBI | GATNNNNATC | 2 cut(s) | 127, 762 |
| BsaJI | CCNNGG | 2 cut(s) | 845, 1046 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 258, 288, 450, 480 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 16 |
| Bse118I | RCCGGY | 1 cut(s) | 812 |
| Bse1I | ACTGG | 4 cut(s) | 171, 262, 626, 964 |
| Bse3DI | GCAATG | 2 cut(s) | 64, 698 |
| Bse8I | GATNNNNATC | 2 cut(s) | 127, 762 |
| BseBI | CCWGG | 2 cut(s) | 497, 1057 |
| BseCI | ATCGAT | 1 cut(s) | 438 |
| BseDI | CCNNGG | 2 cut(s) | 845, 1046 |
| BseJI | GATNNNNATC | 2 cut(s) | 127, 762 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BseMI | GCAATG | 2 cut(s) | 64, 698 |
| BseMII | CTCAG | 5 cut(s) | 453, 593, 801, 900, 945 |
| BseNI | ACTGG | 4 cut(s) | 171, 262, 626, 964 |
| BshFI | GGCC | 2 cut(s) | 495, 1055 |
| BshVI | ATCGAT | 1 cut(s) | 438 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1038 |
| BsiSI | CCGG | 3 cut(s) | 147, 237, 813 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 2 cut(s) | 495, 1055 |
| Bsp119I | TTCGAA | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 527, 1038 |
| Bsp1407I | TGTACA | 1 cut(s) | 534 |
| Bsp143I | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| BspANI | GGCC | 2 cut(s) | 495, 1055 |
| BspCNI | CTCAG | 5 cut(s) | 454, 592, 800, 899, 944 |
| BspDI | ATCGAT | 1 cut(s) | 438 |
| BspLI | GGNNCC | 1 cut(s) | 983 |
| BspMI | ACCTGC | 1 cut(s) | 969 |
| BspOI | GCTAGC | 1 cut(s) | 101 |
| BspPI | GGATC | 1 cut(s) | 659 |
| BspT104I | TTCGAA | 1 cut(s) | 141 |
| BsrDI | GCAATG | 2 cut(s) | 64, 698 |
| BsrFI | RCCGGY | 1 cut(s) | 812 |
| BsrGI | TGTACA | 1 cut(s) | 534 |
| BsrI | ACTGG | 4 cut(s) | 171, 262, 626, 964 |
| BssAI | RCCGGY | 1 cut(s) | 812 |
| BssECI | CCNNGG | 2 cut(s) | 845, 1046 |
| BssMI | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| Bst2UI | CCWGG | 2 cut(s) | 497, 1057 |
| Bst4CI | ACNGT | 2 cut(s) | 907, 971 |
| BstAUI | TGTACA | 1 cut(s) | 534 |
| BstBI | TTCGAA | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 2 cut(s) | 99, 772 |
| BstDEI | CTNAG | 5 cut(s) | 462, 579, 787, 886, 931 |
| BstDSI | CCRYGG | 1 cut(s) | 845 |
| BstHHI | GCGC | 1 cut(s) | 231 |
| BstKTI | GATC | 5 cut(s) | 41, 301, 667, 760, 903 |
| BstMBI | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| BstNI | CCWGG | 2 cut(s) | 497, 1057 |
| BstNSI | RCATGY | 1 cut(s) | 545 |
| BstSCI | CCNGG | 2 cut(s) | 495, 1055 |
| BstSFI | CTRYAG | 1 cut(s) | 627 |
| BstV2I | GAAGAC | 1 cut(s) | 213 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 959 |
| Bsu15I | ATCGAT | 1 cut(s) | 438 |
| BsuI | GTATCC | 1 cut(s) | 146 |
| BsuRI | GGCC | 2 cut(s) | 495, 1055 |
| BsuTUI | ATCGAT | 1 cut(s) | 438 |
| BtgI | CCRYGG | 1 cut(s) | 845 |
| BtsI | GCAGTG | 1 cut(s) | 807 |
| BtsIMutI | CAGTG | 4 cut(s) | 610, 807, 894, 903 |
| BveI | ACCTGC | 1 cut(s) | 969 |
| Cac8I | GCNNGC | 2 cut(s) | 99, 772 |
| CfoI | GCGC | 1 cut(s) | 231 |
| Cfr10I | RCCGGY | 1 cut(s) | 812 |
| Cfr13I | GGNCC | 1 cut(s) | 19 |
| ClaI | ATCGAT | 1 cut(s) | 438 |
| Csp6I | GTAC | 4 cut(s) | 175, 316, 535, 632 |
| CviAII | CATG | 7 cut(s) | 110, 374, 542, 716, 767, 975, 1009 |
| CviQI | GTAC | 4 cut(s) | 175, 316, 535, 632 |
| DdeI | CTNAG | 5 cut(s) | 462, 579, 787, 886, 931 |
| DpnI | GATC | 5 cut(s) | 40, 300, 666, 759, 902 |
| DpnII | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| EaeI | YGGCCR | 1 cut(s) | 1053 |
| Eco24I | GRGCYC | 1 cut(s) | 527 |
| Eco32I | GATATC | 1 cut(s) | 431 |
| Eco47I | GGWCC | 1 cut(s) | 19 |
| Eco57I | CTGAAG | 2 cut(s) | 236, 630 |
| EcoRII | CCWGG | 2 cut(s) | 495, 1055 |
| EcoRV | GATATC | 1 cut(s) | 431 |
| EcoT38I | GRGCYC | 1 cut(s) | 527 |
| FaeI | CATG | 7 cut(s) | 113, 377, 545, 719, 770, 978, 1012 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 234, 266 |
| FatI | CATG | 7 cut(s) | 109, 373, 541, 715, 766, 974, 1008 |
| FauNDI | CATATG | 1 cut(s) | 158 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| FblI | GTMKAC | 1 cut(s) | 222 |
| FriOI | GRGCYC | 1 cut(s) | 527 |
| FspBI | CTAG | 1 cut(s) | 98 |
| FspI | TGCGCA | 1 cut(s) | 230 |
| GlaI | GCGC | 1 cut(s) | 230 |
| HaeIII | GGCC | 2 cut(s) | 495, 1055 |
| HapII | CCGG | 3 cut(s) | 147, 237, 813 |
| HhaI | GCGC | 1 cut(s) | 231 |
| Hin1II | CATG | 7 cut(s) | 113, 377, 545, 719, 770, 978, 1012 |
| Hin6I | GCGC | 1 cut(s) | 229 |
| HinP1I | GCGC | 1 cut(s) | 229 |
| HinfI | GANTC | 5 cut(s) | 50, 83, 114, 128, 245 |
| HpaII | CCGG | 3 cut(s) | 147, 237, 813 |
| HphI | GGTGA | 2 cut(s) | 712, 827 |
| Hpy166II | GTNNAC | 3 cut(s) | 223, 685, 1020 |
| Hpy188I | TCNGA | 7 cut(s) | 19, 38, 49, 255, 303, 790, 934 |
| Hpy188III | TCNNGA | 1 cut(s) | 326 |
| Hpy8I | GTNNAC | 3 cut(s) | 223, 685, 1020 |
| Hpy99I | CGWCG | 1 cut(s) | 864 |
| HpyAV | CCTTC | 4 cut(s) | 605, 678, 997, 1033 |
| HpyCH4III | ACNGT | 2 cut(s) | 907, 971 |
| HpyCH4IV | ACGT | 1 cut(s) | 859 |
| HpyCH4V | TGCA | 4 cut(s) | 69, 477, 691, 978 |
| HpyF3I | CTNAG | 5 cut(s) | 462, 579, 787, 886, 931 |
| HpySE526I | ACGT | 1 cut(s) | 859 |
| Hsp92II | CATG | 7 cut(s) | 113, 377, 545, 719, 770, 978, 1012 |
| HspAI | GCGC | 1 cut(s) | 229 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| Kzo9I | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| LmnI | GCTCC | 1 cut(s) | 458 |
| LweI | GCATC | 1 cut(s) | 322 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MaeII | ACGT | 1 cut(s) | 859 |
| MaeIII | GTNAC | 1 cut(s) | 718 |
| MalI | GATC | 5 cut(s) | 40, 300, 666, 759, 902 |
| MboI | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| MboII | GAAGA | 6 cut(s) | 205, 208, 218, 254, 341, 883 |
| MhlI | GDGCHC | 2 cut(s) | 527, 1038 |
| MlsI | TGGCCA | 1 cut(s) | 1055 |
| MluCI | AATT | 5 cut(s) | 407, 560, 599, 836, 991 |
| MluNI | TGGCCA | 1 cut(s) | 1055 |
| MlyI | GAGTC | 2 cut(s) | 92, 123 |
| MmeI | TCCRAC | 1 cut(s) | 809 |
| MnlI | CCTC | 8 cut(s) | 143, 457, 639, 928, 934, 940, 958, 1056 |
| Mox20I | TGGCCA | 1 cut(s) | 1055 |
| MscI | TGGCCA | 1 cut(s) | 1055 |
| MseI | TTAA | 2 cut(s) | 12, 402 |
| Msp20I | TGGCCA | 1 cut(s) | 1055 |
| MspI | CCGG | 3 cut(s) | 147, 237, 813 |
| MspR9I | CCNGG | 2 cut(s) | 497, 1057 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 2 cut(s) | 497, 1057 |
| NdeI | CATATG | 1 cut(s) | 158 |
| NdeII | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| NheI | GCTAGC | 1 cut(s) | 97 |
| NlaIII | CATG | 7 cut(s) | 113, 377, 545, 719, 770, 978, 1012 |
| NlaIV | GGNNCC | 1 cut(s) | 983 |
| NmuCI | GTSAC | 1 cut(s) | 718 |
| NsbI | TGCGCA | 1 cut(s) | 230 |
| NspI | RCATGY | 1 cut(s) | 545 |
| NspV | TTCGAA | 1 cut(s) | 141 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PfeI | GAWTC | 3 cut(s) | 50, 128, 245 |
| PflFI | GACNNNGTC | 1 cut(s) | 947 |
| PleI | GAGTC | 2 cut(s) | 91, 122 |
| PpsI | GAGTC | 2 cut(s) | 91, 122 |
| Psp6I | CCWGG | 2 cut(s) | 495, 1055 |
| PspGI | CCWGG | 2 cut(s) | 495, 1055 |
| PspN4I | GGNNCC | 1 cut(s) | 983 |
| PspPI | GGNCC | 1 cut(s) | 19 |
| PsyI | GACNNNGTC | 1 cut(s) | 947 |
| RsaI | GTAC | 4 cut(s) | 176, 317, 536, 633 |
| RsaNI | GTAC | 4 cut(s) | 175, 316, 535, 632 |
| SaqAI | TTAA | 2 cut(s) | 12, 402 |
| Sau3AI | GATC | 5 cut(s) | 38, 298, 664, 757, 900 |
| Sau96I | GGNCC | 1 cut(s) | 19 |
| ScaI | AGTACT | 1 cut(s) | 633 |
| SchI | GAGTC | 2 cut(s) | 92, 123 |
| ScrFI | CCNGG | 2 cut(s) | 497, 1057 |
| SduI | GDGCHC | 2 cut(s) | 527, 1038 |
| SfaNI | GCATC | 1 cut(s) | 322 |
| SfcI | CTRYAG | 1 cut(s) | 627 |
| SfuI | TTCGAA | 1 cut(s) | 141 |
| SinI | GGWCC | 1 cut(s) | 19 |
| Sse9I | AATT | 5 cut(s) | 407, 560, 599, 836, 991 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyD4I | CCNGG | 2 cut(s) | 495, 1055 |
| TaaI | ACNGT | 2 cut(s) | 907, 971 |
| TaiI | ACGT | 1 cut(s) | 862 |
| TaqI | TCGA | 3 cut(s) | 141, 438, 760 |
| TasI | AATT | 5 cut(s) | 407, 560, 599, 836, 991 |
| TatI | WGTACW | 3 cut(s) | 315, 534, 631 |
| TfiI | GAWTC | 3 cut(s) | 50, 128, 245 |
| Tru1I | TTAA | 2 cut(s) | 12, 402 |
| Tru9I | TTAA | 2 cut(s) | 12, 402 |
| TscAI | CASTG | 4 cut(s) | 610, 814, 894, 910 |
| TseFI | GTSAC | 1 cut(s) | 718 |
| Tsp45I | GTSAC | 1 cut(s) | 718 |
| TspDTI | ATGAA | 5 cut(s) | 141, 362, 793, 829, 963 |
| TspGWI | ACGGA | 1 cut(s) | 386 |
| TspRI | CASTG | 4 cut(s) | 610, 814, 894, 910 |
| Tth111I | GACNNNGTC | 1 cut(s) | 947 |
| VpaK11BI | GGWCC | 1 cut(s) | 19 |
| XapI | RAATTY | 3 cut(s) | 407, 560, 836 |
| XceI | RCATGY | 1 cut(s) | 545 |
| XmiI | GTMKAC | 1 cut(s) | 222 |
| XspI | CTAG | 1 cut(s) | 98 |
| ZrmI | AGTACT | 1 cut(s) | 633 |