Rmu_sc0010781.1_g000002

Acidic leucine-rich nuclear phosphoprotein 32-related

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010781.1
Physical Location & Seq
Reverse (-)
4683 .. 7290
2608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010781.1_g000002.1.cds

Sequence Viewer

Length: 1416 bp
atggatgagatctgggagcgagccattgagacagcgctggacggcgagacagaccacgcttcggctcgaaccctgactctagatggtgcggtgaagtgcgtccagggccggctaccccctccgggtcttctagagaagttccagaaccttcagcatctctcgattgcaaacgtcggcgtttcgtccctggagcagttcccgaggctccgaagcctccactccctgattctgtccgacaatcgaatcgcaggagggcttgaatttctggtagaggccgggctggactcgctgagagacctggacctgtccaacaaccggattcagtatattgaagatcttgccccgctggcgcagctgaagctgacctcgcttgatctgtatgagtgtccggtgacgcgtgtcaaggattaccgatctagggttttcgggttgattaggtcgttgaagtatttggataagatggatgcggaggagaacgagccgccggagagcgaggatgaggaggaggaggatgaggaggatgaggatgaccctgggagcggggaaatcgatggtgaggatcggccttctaggatgagtaatgggcacactgaggcggctgaaggggttgtggatgttgatgaggatgatgagagtgacgccgatgaggaggagactttgactgccactagggtgaatggacagaatcacccgacggagaacgggttccgggttgctcccgtggccggagagaatggaggagaggatgaggaggatgatgatgatgagaactactctgcggaggagatagacgaggaggatagtgaggatgatgaggtggtggaggtgcatgagattgaggatagtgatgatgaggaagatggggttgagtatgatgaggaggatgacgacgatgacgacgacgatgaagatgatgaggaggaggaagtggacaatgatgagggggatttggcagagccagagagtacaggaaggttaacaagcacagagggagagattgatggccatgagcaaggagaggatgatggagatgaagatgataatggagagaccggggaggaggagctgggtgttgaagaagagggaccgcttgaagttgaagttgaagatgaagatggcgaggaagaggaggaagactatggcggaggttacttagtgcaaccagtggcacaggctgaggaagaagatgctggcgtcagtgacatggatgcagaaaatgaagaaggggatggtgaagaagatgaggaggaagtcgaagaggatgatgacgatgaagttcaggttctacctccctcgtcttcttcacagatgaagagaaaaagagatgaagctgcagattcagatgacaatggtgaggatgacgaggaagatgatgatgtggttgagtacagcaagtcttcgaagaagcaccgttga

Protein Analysis

471

Amino Acids

52.36

Weight (kDa)

4.05

Isoelectric Point (pI)

65.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50690
fragaria_vesca FvH4_1g13531
malus_domestica MD02G1150500.v1.1 MD15G1265000.v1.1
prunus_persica Prupe.7G152600_v2.0.a1
pyrus_communis pycom02g11820 pycom15g23080
rosa_chinensis RchiOBHm_Chr2g0101911
rosa_laevigata RLG00000017115
rosa_multiflora Rmu_sc0010781.1_g000002
rosa_rugosa Rorug02G0103000
rosa_samantha Rh2AG151000 Rh2BG156500 Rh2CG156300 Rh2DG156600
rosa_wichuraiana Rw2G011780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 540
AccII CGCG 1 cut(s) 397
AciI CCGC 9 cut(s) 89, 344, 467, 482, 540, 596, 779, 1088, 1143
AclWI GGATC 1 cut(s) 567
AcoI YGGCCR 2 cut(s) 723, 1003
AcsI RAATTY 1 cut(s) 260
AcuI CTGAAG 3 cut(s) 134, 377, 621
AcyI GRCGYC 2 cut(s) 639, 1194
AfaI GTAC 2 cut(s) 967, 1388
AfeI AGCGCT 1 cut(s) 36
AfiI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 725
AflIII ACRYGT 1 cut(s) 395
AgsI TTSAA 7 cut(s) 260, 332, 445, 1076, 1094, 1100, 1106
AjnI CCWGG 4 cut(s) 102, 186, 297, 532
AleI CACNNNNGTG 1 cut(s) 671
AloI GAACNNNNNNTCC 2 cut(s) 689, 721
AluBI AGCT 4 cut(s) 355, 361, 1066, 1331
AluI AGCT 4 cut(s) 355, 361, 1066, 1331
Alw26I GTCTC 5 cut(s) 23, 41, 288, 647, 1043
AlwI GGATC 1 cut(s) 567
Ama87I CYCGRG 1 cut(s) 199
Aor51HI AGCGCT 1 cut(s) 36
AoxI GGCC 5 cut(s) 106, 273, 563, 723, 1003
ApeKI GCWGC 2 cut(s) 352, 1331
ApoI RAATTY 1 cut(s) 260
Asp700I GAANNNNTTC 1 cut(s) 704
AspLEI GCGC 2 cut(s) 37, 352
AspS9I GGNCC 3 cut(s) 106, 301, 1085
AsuC2I CCSGG 4 cut(s) 123, 277, 710, 1054
AsuHPI GGTGA 7 cut(s) 103, 403, 566, 680, 685, 1244, 1364
AsuII TTCGAA 1 cut(s) 1400
AvaI CYCGRG 1 cut(s) 199
AvaII GGWCC 2 cut(s) 301, 1085
BaeGI GKGCMC 1 cut(s) 588
BalI TGGCCA 1 cut(s) 1005
BbsI GAAGAC 4 cut(s) 119, 1140, 1290, 1389
BbvCI CCTCAGC 1 cut(s) 1176
BbvI GCAGC 2 cut(s) 364, 1318
BccI CCATC 8 cut(s) 77, 454, 545, 854, 995, 1019, 1109, 1223
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 4 cut(s) 104, 188, 299, 534
BcnI CCSGG 4 cut(s) 123, 277, 710, 1054
BcoDI GTCTC 5 cut(s) 23, 41, 288, 647, 1043
BfaI CTAG 5 cut(s) 80, 131, 417, 570, 669
BfmI CTRYAG 1 cut(s) 1332
BfoI RGCGCY 1 cut(s) 38
BglI GCCNNNNNGGC 1 cut(s) 347
BglII AGATCT 2 cut(s) 9, 334
BisI GCNGC 4 cut(s) 353, 482, 597, 1332
BlsI GCNGC 4 cut(s) 354, 483, 598, 1333
Bme1390I CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 710, 1054
Bme18I GGWCC 2 cut(s) 301, 1085
BmeT110I CYCGRG 1 cut(s) 199
BmgT120I GGNCC 3 cut(s) 106, 301, 1085
BmiI GGNNCC 3 cut(s) 206, 707, 1086
BmrFI CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 710, 1054
BmsI GCATC 4 cut(s) 163, 454, 1177, 1198
BoxI GACNNNNGTC 1 cut(s) 398
BpiI GAAGAC 4 cut(s) 119, 1140, 1290, 1389
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 1176
Bpu14I TTCGAA 1 cut(s) 1400
BpuMI CCSGG 4 cut(s) 123, 277, 710, 1054
Bsa29I ATCGAT 1 cut(s) 549
BsaHI GRCGYC 2 cut(s) 639, 1194
BsaI GGTCTC 2 cut(s) 288, 1043
BsaJI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 720, 1053
BsaWI WCCGGW 2 cut(s) 315, 388
BsaXI ACNNNNNCTCC 2 cut(s) 689, 719
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 725
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 1163
BseBI CCWGG 4 cut(s) 104, 188, 299, 534
BseCI ATCGAT 1 cut(s) 549
BseDI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 720, 1053
BseLI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 725
BseMII CTCAG 3 cut(s) 281, 582, 1167
BseNI ACTGG 1 cut(s) 1163
BseSI GKGCMC 1 cut(s) 588
BseXI GCAGC 2 cut(s) 364, 1318
BseYI CCCAGC 1 cut(s) 1066
Bsh1236I CGCG 1 cut(s) 397
BshFI GGCC 5 cut(s) 108, 275, 565, 725, 1005
BshVI ATCGAT 1 cut(s) 549
BsiHKCI CYCGRG 1 cut(s) 199
BsiSI CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 709, 726, 1053
BslFI GGGAC 2 cut(s) 169, 1098
BslI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 725
BsmAI GTCTC 5 cut(s) 23, 41, 288, 647, 1043
BsmFI GGGAC 2 cut(s) 169, 1098
BsnI GGCC 5 cut(s) 108, 275, 565, 725, 1005
Bso31I GGTCTC 2 cut(s) 288, 1043
BsoBI CYCGRG 1 cut(s) 199
Bsp119I TTCGAA 1 cut(s) 1400
Bsp1286I GDGCHC 1 cut(s) 588
Bsp143I GATC 5 cut(s) 9, 334, 373, 413, 559
BspACI CCGC 9 cut(s) 89, 344, 467, 482, 540, 596, 779, 1088, 1143
BspANI GGCC 5 cut(s) 108, 275, 565, 725, 1005
BspCNI CTCAG 3 cut(s) 282, 583, 1168
BspDI ATCGAT 1 cut(s) 549
BspFNI CGCG 1 cut(s) 397
BspLI GGNNCC 3 cut(s) 206, 707, 1086
BspMAI CTGCAG 1 cut(s) 1336
BspPI GGATC 1 cut(s) 567
BspT104I TTCGAA 1 cut(s) 1400
BspTNI GGTCTC 2 cut(s) 288, 1043
BsrBI CCGCTC 1 cut(s) 540
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 1 cut(s) 1163
BssAI RCCGGY 1 cut(s) 108
BssECI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 720, 1053
BssMI GATC 5 cut(s) 9, 334, 373, 413, 559
BssNI GRCGYC 2 cut(s) 639, 1194
Bst2UI CCWGG 4 cut(s) 104, 188, 299, 534
Bst4CI ACNGT 1 cut(s) 1412
Bst6I CTCTTC 4 cut(s) 1074, 1119, 1251, 1307
BstACI GRCGYC 2 cut(s) 639, 1194
BstBI TTCGAA 1 cut(s) 1400
BstC8I GCNNGC 4 cut(s) 21, 110, 348, 1192
BstDEI CTNAG 4 cut(s) 290, 591, 1153, 1176
BstDSI CCRYGG 1 cut(s) 720
BstFNI CGCG 1 cut(s) 397
BstH2I RGCGCY 1 cut(s) 38
BstHHI GCGC 2 cut(s) 37, 352
BstKTI GATC 5 cut(s) 12, 337, 376, 416, 562
BstMAI GTCTC 5 cut(s) 23, 41, 288, 647, 1043
BstMBI GATC 5 cut(s) 9, 334, 373, 413, 559
BstMWI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 722
BstNI CCWGG 4 cut(s) 104, 188, 299, 534
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 8 cut(s) 102, 121, 186, 275, 297, 532, 708, 1052
BstSFI CTRYAG 1 cut(s) 1332
BstSLI GKGCMC 1 cut(s) 588
BstUI CGCG 1 cut(s) 397
BstV1I GCAGC 2 cut(s) 364, 1318
BstV2I GAAGAC 4 cut(s) 119, 1140, 1290, 1389
BstX2I RGATCY 2 cut(s) 9, 334
BstYI RGATCY 2 cut(s) 9, 334
Bsu15I ATCGAT 1 cut(s) 549
BsuRI GGCC 5 cut(s) 108, 275, 565, 725, 1005
BsuTUI ATCGAT 1 cut(s) 549
BtgI CCRYGG 1 cut(s) 720
BtsIMutI CAGTG 3 cut(s) 588, 1170, 1204
Cac8I GCNNGC 4 cut(s) 21, 110, 348, 1192
CfoI GCGC 2 cut(s) 37, 352
Cfr10I RCCGGY 1 cut(s) 108
Cfr13I GGNCC 3 cut(s) 106, 301, 1085
ClaI ATCGAT 1 cut(s) 549
CseI GACGC 4 cut(s) 88, 403, 647, 1183
Csp6I GTAC 2 cut(s) 966, 1387
CviAII CATG 3 cut(s) 830, 1007, 1204
CviQI GTAC 2 cut(s) 966, 1387
DdeI CTNAG 4 cut(s) 290, 591, 1153, 1176
DpnI GATC 5 cut(s) 11, 336, 375, 415, 561
DpnII GATC 5 cut(s) 9, 334, 373, 413, 559
EaeI YGGCCR 2 cut(s) 723, 1003
Eam1104I CTCTTC 4 cut(s) 1074, 1119, 1251, 1307
EarI CTCTTC 4 cut(s) 1074, 1119, 1251, 1307
EciI GGCGGA 1 cut(s) 1158
Eco31I GGTCTC 2 cut(s) 288, 1043
Eco47I GGWCC 2 cut(s) 301, 1085
Eco47III AGCGCT 1 cut(s) 36
Eco57I CTGAAG 3 cut(s) 134, 377, 621
Eco88I CYCGRG 1 cut(s) 199
EcoRII CCWGG 4 cut(s) 102, 186, 297, 532
FaeI CATG 3 cut(s) 833, 1010, 1207
FaiI YATR 7 cut(s) 327, 381, 831, 873, 1008, 1140, 1205
FaqI GGGAC 2 cut(s) 169, 1098
FatI CATG 3 cut(s) 829, 1006, 1203
FauI CCCGC 2 cut(s) 351, 533
Fnu4HI GCNGC 4 cut(s) 353, 482, 597, 1332
Fsp4HI GCNGC 4 cut(s) 353, 482, 597, 1332
FspBI CTAG 5 cut(s) 80, 131, 417, 570, 669
GlaI GCGC 2 cut(s) 36, 351
GluI GCNGC 4 cut(s) 353, 482, 597, 1332
GsaI CCCAGC 1 cut(s) 1070
GsuI CTGGAG 1 cut(s) 209
HaeII RGCGCY 1 cut(s) 38
HaeIII GGCC 5 cut(s) 108, 275, 565, 725, 1005
HapII CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 709, 726, 1053
HgaI GACGC 4 cut(s) 88, 403, 647, 1183
HhaI GCGC 2 cut(s) 37, 352
Hin1I GRCGYC 2 cut(s) 639, 1194
Hin1II CATG 3 cut(s) 833, 1010, 1207
Hin6I GCGC 2 cut(s) 35, 350
HinP1I GCGC 2 cut(s) 35, 350
HincII GTYRAC 1 cut(s) 978
HindII GTYRAC 1 cut(s) 978
HinfI GANTC 7 cut(s) 76, 226, 243, 284, 319, 685, 1337
HpaI GTTAAC 1 cut(s) 978
HpaII CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 709, 726, 1053
HphI GGTGA 7 cut(s) 103, 403, 566, 680, 685, 1244, 1364
Hpy166II GTNNAC 2 cut(s) 931, 978
Hpy188I TCNGA 3 cut(s) 209, 235, 1342
Hpy188III TCNNGA 5 cut(s) 80, 131, 142, 160, 199
Hpy8I GTNNAC 2 cut(s) 931, 978
Hpy99I CGWCG 5 cut(s) 176, 697, 893, 902, 905
HpyAV CCTTC 5 cut(s) 158, 576, 596, 966, 1217
HpyCH4III ACNGT 1 cut(s) 1412
HpyCH4IV ACGT 1 cut(s) 171
HpyCH4V TGCA 5 cut(s) 167, 829, 1159, 1211, 1334
HpyF10VI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 722
HpyF3I CTNAG 4 cut(s) 290, 591, 1153, 1176
HpySE526I ACGT 1 cut(s) 171
Hsp92I GRCGYC 2 cut(s) 639, 1194
Hsp92II CATG 3 cut(s) 833, 1010, 1207
HspAI GCGC 2 cut(s) 35, 350
KroI GCCGGC 1 cut(s) 108
KroNI GCCGGC 1 cut(s) 110
KspAI GTTAAC 1 cut(s) 978
Kzo9I GATC 5 cut(s) 9, 334, 373, 413, 559
LmnI GCTCC 6 cut(s) 16, 190, 210, 537, 721, 1063
Lsp1109I GCAGC 2 cut(s) 364, 1318
LweI GCATC 4 cut(s) 163, 454, 1177, 1198
MaeI CTAG 5 cut(s) 80, 131, 417, 570, 669
MaeII ACGT 1 cut(s) 171
MaeIII GTNAC 4 cut(s) 391, 635, 1148, 1199
MalI GATC 5 cut(s) 11, 336, 375, 415, 561
MbiI CCGCTC 1 cut(s) 540
MboI GATC 5 cut(s) 9, 334, 373, 413, 559
MflI RGATCY 2 cut(s) 9, 334
MhlI GDGCHC 1 cut(s) 588
MlsI TGGCCA 1 cut(s) 1005
MluCI AATT 1 cut(s) 260
MluI ACGCGT 1 cut(s) 395
MluNI TGGCCA 1 cut(s) 1005
MlyI GAGTC 2 cut(s) 70, 278
MmeI TCCRAC 2 cut(s) 258, 333
Mox20I TGGCCA 1 cut(s) 1005
MroNI GCCGGC 1 cut(s) 108
MroXI GAANNNNTTC 1 cut(s) 704
MscI TGGCCA 1 cut(s) 1005
MseI TTAA 1 cut(s) 977
MslI CAYNNNNRTG 1 cut(s) 671
Msp20I TGGCCA 1 cut(s) 1005
MspA1I CMGCKG 2 cut(s) 346, 355
MspI CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 709, 726, 1053
MspR9I CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 710, 1054
MvaI CCWGG 4 cut(s) 104, 188, 299, 534
MvnI CGCG 1 cut(s) 397
MwoI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 722
NaeI GCCGGC 1 cut(s) 110
NciI CCSGG 4 cut(s) 123, 277, 710, 1054
NdeII GATC 5 cut(s) 9, 334, 373, 413, 559
NgoMIV GCCGGC 1 cut(s) 108
NlaIII CATG 3 cut(s) 833, 1010, 1207
NlaIV GGNNCC 3 cut(s) 206, 707, 1086
NmuCI GTSAC 3 cut(s) 391, 635, 1199
NspV TTCGAA 1 cut(s) 1400
OliI CACNNNNGTG 1 cut(s) 671
PasI CCCWGGG 1 cut(s) 533
PcsI WCGNNNNNNNCGW 2 cut(s) 894, 897
PdiI GCCGGC 1 cut(s) 110
PdmI GAANNNNTTC 1 cut(s) 704
PfeI GAWTC 5 cut(s) 226, 243, 319, 685, 1337
PkrI GCNGC 4 cut(s) 354, 483, 598, 1333
PleI GAGTC 2 cut(s) 70, 278
PpsI GAGTC 2 cut(s) 70, 278
PshAI GACNNNNGTC 1 cut(s) 398
Psp6I CCWGG 4 cut(s) 102, 186, 297, 532
PspFI CCCAGC 1 cut(s) 1066
PspGI CCWGG 4 cut(s) 102, 186, 297, 532
PspN4I GGNNCC 3 cut(s) 206, 707, 1086
PspPI GGNCC 3 cut(s) 106, 301, 1085
PstI CTGCAG 1 cut(s) 1336
PsuI RGATCY 2 cut(s) 9, 334
PvuII CAGCTG 1 cut(s) 355
RsaI GTAC 2 cut(s) 967, 1388
RsaNI GTAC 2 cut(s) 966, 1387
RseI CAYNNNNRTG 1 cut(s) 671
SaqAI TTAA 1 cut(s) 977
SatI GCNGC 4 cut(s) 353, 482, 597, 1332
Sau3AI GATC 5 cut(s) 9, 334, 373, 413, 559
Sau96I GGNCC 3 cut(s) 106, 301, 1085
SchI GAGTC 2 cut(s) 70, 278
ScrFI CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 710, 1054
SduI GDGCHC 1 cut(s) 588
SfaNI GCATC 4 cut(s) 163, 454, 1177, 1198
SfcI CTRYAG 1 cut(s) 1332
SfuI TTCGAA 1 cut(s) 1400
SinI GGWCC 2 cut(s) 301, 1085
SmiMI CAYNNNNRTG 1 cut(s) 671
Sse9I AATT 1 cut(s) 260
SsiI CCGC 9 cut(s) 89, 344, 467, 482, 540, 596, 779, 1088, 1143
SspMI CTAG 5 cut(s) 80, 131, 417, 570, 669
StyD4I CCNGG 8 cut(s) 102, 121, 186, 275, 297, 532, 708, 1052
TaaI ACNGT 1 cut(s) 1412
TaiI ACGT 1 cut(s) 174
TaqI TCGA 6 cut(s) 67, 161, 241, 549, 1254, 1400
TasI AATT 1 cut(s) 260
TatI WGTACW 2 cut(s) 965, 1386
TauI GCSGC 2 cut(s) 484, 599
TfiI GAWTC 5 cut(s) 226, 243, 319, 685, 1337
Tru1I TTAA 1 cut(s) 977
Tru9I TTAA 1 cut(s) 977
TscAI CASTG 3 cut(s) 595, 1170, 1204
TseFI GTSAC 3 cut(s) 391, 635, 1199
TseI GCWGC 2 cut(s) 352, 1331
Tsp45I GTSAC 3 cut(s) 391, 635, 1199
TspDTI ATGAA 7 cut(s) 921, 1047, 1125, 1233, 1287, 1325, 1341
TspGWI ACGGA 1 cut(s) 710
TspRI CASTG 3 cut(s) 595, 1170, 1204
VpaK11BI GGWCC 2 cut(s) 301, 1085
XapI RAATTY 1 cut(s) 260
XbaI TCTAGA 2 cut(s) 79, 130
XmnI GAANNNNTTC 1 cut(s) 704
XspI CTAG 5 cut(s) 80, 131, 417, 570, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.