Rmu_sc0013960.1_g000005

MLP-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013960.1
Physical Location & Seq
Reverse (-)
18268 .. 18844
577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013960.1_g000005.1.cds

Sequence Viewer

Length: 396 bp
atgtccagttatggtaagctggaggtggctattgagatcacagttggtgcttacgagttctgtgatatggtggtaaacagaccacaccatgtacctgacaagaaacttgatggtgttgcaattaatcaagcagactcgatcgtccccgcaaaagtcggttctatctcctcctggaagtatttccaagccctggacagcaagaaacattcaacgacttggaaaatcgttgaaggagaacttcttgaccattacaagagcttcaagttcatcctgcaaattattaccacttcaaacccgaaagcaacggtccatatgattttggagtatgagaagatgcatgacgatgttgcagacttgcagacccatgccatattttatatatgctccagacggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

14.93

Weight (kDa)

6.64

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 140
AccB7I CCANNNNNTGG 1 cut(s) 190
AciI CCGC 1 cut(s) 147
AfaI GTAC 1 cut(s) 93
AfiI CCNNNNNNNGG 1 cut(s) 190
AgsI TTSAA 4 cut(s) 210, 230, 262, 291
AjnI CCWGG 2 cut(s) 170, 189
AluBI AGCT 2 cut(s) 19, 258
AluI AGCT 2 cut(s) 19, 258
AseI ATTAAT 1 cut(s) 123
Asp700I GAANNNNTTC 1 cut(s) 179
AspS9I GGNCC 1 cut(s) 307
AvaII GGWCC 1 cut(s) 307
BccI CCATC 1 cut(s) 104
BciT130I CCWGG 2 cut(s) 172, 191
Bme1390I CCNGG 2 cut(s) 172, 191
Bme18I GGWCC 1 cut(s) 307
BmgT120I GGNCC 1 cut(s) 307
BmrFI CCNGG 2 cut(s) 172, 191
BmsI GCATC 1 cut(s) 324
BpmI CTGGAG 2 cut(s) 41, 370
BsaJI CCNNGG 1 cut(s) 189
Bsc4I CCNNNNNNNGG 1 cut(s) 190
Bse1I ACTGG 1 cut(s) 6
BseBI CCWGG 2 cut(s) 172, 191
BseDI CCNNGG 1 cut(s) 189
BseGI GGATG 1 cut(s) 267
BseLI CCNNNNNNNGG 1 cut(s) 190
BseNI ACTGG 1 cut(s) 6
BseRI GAGGAG 1 cut(s) 157
Bsh1285I CGRYCG 1 cut(s) 141
BsiEI CGRYCG 1 cut(s) 141
BslFI GGGAC 1 cut(s) 128
BslI CCNNNNNNNGG 1 cut(s) 190
BsmFI GGGAC 1 cut(s) 128
Bsp143I GATC 2 cut(s) 36, 138
BspACI CCGC 1 cut(s) 147
BsrI ACTGG 1 cut(s) 6
BssECI CCNNGG 1 cut(s) 189
BssMI GATC 2 cut(s) 36, 138
Bst2UI CCWGG 2 cut(s) 172, 191
Bst4CI ACNGT 3 cut(s) 43, 307, 393
BstF5I GGATG 1 cut(s) 267
BstKTI GATC 2 cut(s) 39, 141
BstMBI GATC 2 cut(s) 36, 138
BstMCI CGRYCG 1 cut(s) 141
BstNI CCWGG 2 cut(s) 172, 191
BstSCI CCNGG 2 cut(s) 170, 189
BtsCI GGATG 1 cut(s) 267
Cfr13I GGNCC 1 cut(s) 307
Csp6I GTAC 1 cut(s) 92
CviAII CATG 3 cut(s) 89, 338, 365
CviJI RGCY 4 cut(s) 19, 29, 188, 258
CviKI_1 RGCY 4 cut(s) 19, 29, 188, 258
CviQI GTAC 1 cut(s) 92
DpnI GATC 2 cut(s) 38, 140
DpnII GATC 2 cut(s) 36, 138
DrdI GACNNNNNNGTC 1 cut(s) 140
DseDI GACNNNNNNGTC 1 cut(s) 140
Eco47I GGWCC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 170, 189
EcoT22I ATGCAT 1 cut(s) 339
FaeI CATG 3 cut(s) 92, 341, 368
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FaqI GGGAC 1 cut(s) 128
FatI CATG 3 cut(s) 88, 337, 364
FauI CCCGC 1 cut(s) 154
FauNDI CATATG 1 cut(s) 312
FokI GGATG 1 cut(s) 254
GsuI CTGGAG 2 cut(s) 41, 370
Hin1II CATG 3 cut(s) 92, 341, 368
HinfI GANTC 1 cut(s) 134
Hpy166II GTNNAC 1 cut(s) 76
Hpy188III TCNNGA 2 cut(s) 242, 387
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 1 cut(s) 224
HpyCH4III ACNGT 3 cut(s) 43, 307, 393
HpyCH4V TGCA 5 cut(s) 119, 274, 337, 350, 358
Hsp92II CATG 3 cut(s) 92, 341, 368
Kzo9I GATC 2 cut(s) 36, 138
LmnI GCTCC 1 cut(s) 389
LpnPI CCDG 8 cut(s) 5, 19, 108, 157, 176, 184, 203, 284
LweI GCATC 1 cut(s) 324
MalI GATC 2 cut(s) 38, 140
MboI GATC 2 cut(s) 36, 138
MboII GAAGA 1 cut(s) 343
MluCI AATT 2 cut(s) 120, 276
MlyI GAGTC 1 cut(s) 128
MnlI CCTC 2 cut(s) 16, 178
Mph1103I ATGCAT 1 cut(s) 339
MroXI GAANNNNTTC 1 cut(s) 179
MseI TTAA 1 cut(s) 123
MslI CAYNNNNRTG 1 cut(s) 342
MspR9I CCNGG 2 cut(s) 172, 191
MvaI CCWGG 2 cut(s) 172, 191
NdeI CATATG 1 cut(s) 312
NdeII GATC 2 cut(s) 36, 138
NlaIII CATG 3 cut(s) 92, 341, 368
NsiI ATGCAT 1 cut(s) 339
PdmI GAANNNNTTC 1 cut(s) 179
PflMI CCANNNNNTGG 1 cut(s) 190
PfoI TCCNGGA 1 cut(s) 170
Ple19I CGATCG 1 cut(s) 141
PleI GAGTC 1 cut(s) 128
PpsI GAGTC 1 cut(s) 128
PshBI ATTAAT 1 cut(s) 123
Psp6I CCWGG 2 cut(s) 170, 189
PspGI CCWGG 2 cut(s) 170, 189
PspPI GGNCC 1 cut(s) 307
PvuI CGATCG 1 cut(s) 141
RsaI GTAC 1 cut(s) 93
RsaNI GTAC 1 cut(s) 92
RseI CAYNNNNRTG 1 cut(s) 342
SaqAI TTAA 1 cut(s) 123
Sau3AI GATC 2 cut(s) 36, 138
Sau96I GGNCC 1 cut(s) 307
SchI GAGTC 1 cut(s) 128
ScrFI CCNGG 2 cut(s) 172, 191
SetI ASST 4 cut(s) 21, 27, 97, 260
SfaNI GCATC 1 cut(s) 324
SinI GGWCC 1 cut(s) 307
SmiMI CAYNNNNRTG 1 cut(s) 342
Sse9I AATT 2 cut(s) 120, 276
SsiI CCGC 1 cut(s) 147
StyD4I CCNGG 2 cut(s) 170, 189
TaaI ACNGT 3 cut(s) 43, 307, 393
TaqI TCGA 1 cut(s) 137
TasI AATT 2 cut(s) 120, 276
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TspDTI ATGAA 1 cut(s) 256
Van91I CCANNNNNTGG 1 cut(s) 190
VpaK11BI GGWCC 1 cut(s) 307
VspI ATTAAT 1 cut(s) 123
XmnI GAANNNNTTC 1 cut(s) 179
Zsp2I ATGCAT 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.