Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0016438.1

Orthogroup ID

OG0015957

Physical Location & Seq

Genomic Coordinates Forward (+)

112 .. 3734

Gene Structure 3623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0016438.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

atgctgacatccaatgagactttgactcggttggggatatacgaggatgagagtttaagaccagatgattttatcaaacttttcaggagcttggagaagaatgcctccttgagacacttatctttacagggctgcaagggtgttcaaggagagttactactgcaaacaatcatggagacattacaggtaaatccttggattgaagatatcgatctttcgagaacaccactgcaaaattcaggaaagactgatgggctctatcaaagattgggtcagaatgggaaggcagaacctgaaacagatttgctgcaggacatgccacttacagtgccaaagagtagtagggtatttttctgtgggcaagaatatgcaggtaagactacattgtgcaatacaatattgcagagtttctattcatcaaagcttccccttgtggaccaagtaagatctctagtgaacccagttgagcaagcggtcagaacagttggagtgaagatcaaaacattcaaagatgacgacacgaacatttcaatatggaatcttgctggtcagcatgaattctattccctccatgatctcatgtttccggggcatgggagtgcatcattctttctcatagtatccagtctatttaggaaaacaaacaatagagagccaaagaatgcaatggagatagaagaggacctccagtactggctcaggttcatagtgtcaaattcaaaaagagcagttcagcaatgcatgctaccaaatgtgacaatcgtgctcacgcactatgacaaagtcaatcagccatcacagaacttgcaggttgcagtaaactcaatccaaatgttgcgagacaagttccagggatttgttgacttctacccaacagtgttcacagttgatgcaagatcatcagcatcagtgagtaaactcactcatcaccttctaaagacaagcaagacggttctccaaagagtccctagaatctatcagctttgcaatgatcttatgcaaatgctatcagactggagatcagagaactacaacaagccagccatgcagtggaaggagtttgatgagctatgccaagtgaaggttccgtccctaagaattcggtcaagacatgataacagaccgaagatggaaaagaggcgacgagctgtagctacttgccttcatcacataggagagttaatatattttgatgaactggggtttctaatcttggattgtgagtggttctgtggtgatgtgctgggccaactaataagactagatgtaagaaagcaaagctcctcagagaataatggattcatcagcaggaaagatttggagaaaattcttagaggaagtctacagagtccaattcctggaatgggttcaaagatatttgataacttagaggctagtgacctagtgaggatgatgcttaaactcgaactatgttaccaacaagacccatcagaccctaactcattgctattcattccctcacttcttgaagaaggcagaggaaagccacaaagatggcagttaagcagacctgaatgcgtttttgcaggtaggcatcttgaatgtgatgattccagccacatgttcctcacaccgggattctttcctcgattacaggtgcatctgcataacaaagtcatagccttgaaaagccaacatggagcaacttacagtcttgagaagcacctaatctcaataaatatcaatggaatctacatcagagttgaactgggaggacagcttggttactacatcgatgttcttgcatgctccaccaagaacctgacagaaacacttagagtcatccagcagcttataataccagcaattcatagcctctgccatggcatcaccttgactgaaaatgtgatgcggccagaatgtgtccgaaacctcacacctcccagatgcaggaaaatacaatgtgtttcattgcaacagctgaaacaggcattgctttctgttcctgcagacagcatgtatgattaccagcacacatgggatccaatctcagatttcgggagacaaataatgggagctggttttgactttgcccgagacctcctatcagatgatgacttccgagaagtactgcaccgcagatatcatgacctatacaaccttgctcaagaactgcaaatcccacctgagagcgacacagatggagcagagaacacaatatccaccagtgatgagcttgcaacagttgaaccaacttttggtggaattgccaaaggggttgaggtagttctgcagagactgaagatcattgaacaagaaatcagagacttgaaacaggagatccaaggtttgagatattatgagcatagactccttgctgagcttcaccgcaaagtgaattaccttgtgacctacaatgtccaaattgaagagaggaaagtgcccaacatgttctactttgtcagaacagaaaactactctaggagattgatcaccaacatggttcctggaatgaatgctcttcgactccacatgttatgtgagttccgaagagaaatgcatgttgtggaagatcagatggggtgtgaaatgatgcaggtcgataacagaactgtgaagtccttggcaccatacaccacaaagttcatgaaactgctgacatttgctctcaagataggagctcatctagctgctgggatgggtgaaatgatacctgatttgagcagggaagttgcgcacctggccgattcttccctccttcatggagcaacaggcgcaggagcagggacagcagttgcagcaggagttgttggagctgtggcaattgggcgtatggagggaaggaacagaagcagggcagcagaaagctcaagagatatccagcaagatctaagaacagcacagcagtgggttctggatttcctaagggagcggagatgctcaactggaaaagatattgcagagaagtttggcttatggagggtgaggtaccgagacgatggccagattgcatggatctgtaggaggcatatcaacctcagagcacacgaagtaatagaagtgccactttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009825 GO:0009888 GO:0009914 GO:0009926 GO:0009933 GO:0009956 GO:0009965 GO:0009987 GO:0010016 GO:0010051 GO:0010305 GO:0010540 GO:0010817 GO:0016049 GO:0032501 GO:0032502 GO:0040007 GO:0048366 GO:0048367 GO:0048507 GO:0048532 GO:0048731 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COR LRR_6 Roc

Protein Analysis

1010

Amino Acids

115.58

Weight (kDa)

7.57

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55540 AT5G55540
fragaria_vesca	FvH4_3g23950
malus_domestica	MD03G1189500.v1.1
prunus_persica	Prupe.4G231800_v2.0.a1
pyrus_communis	pycom03g14240
rosa_chinensis	RchiOBHm_Chr5g0042451
rosa_laevigata	RLG00000034127
rosa_multiflora	Rmu_sc0002779.1_g000005 Rmu_sc0016438.1_g000001
rosa_roxburghii	Rroxscaffold_1G00038240
rosa_rugosa	Rorug05G0200300
rosa_samantha	Rh5AG286400 Rh5CG323200
rosa_wichuraiana	Rw5G026610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1817
Acc16I	TGCGCA	1 cut(s)	2697
Acc36I	ACCTGC	4 cut(s)	362, 799, 1538, 2548
Acc65I	GGTACC	1 cut(s)	2949
AccB1I	GGYRCC	2 cut(s)	2587, 2949
AccB7I	CCANNNNNTGG	3 cut(s)	1050, 1358, 2219
AccBSI	CCGCTC	1 cut(s)	2893
AccI	GTMKAC	1 cut(s)	1342
AciI	CCGC	5 cut(s)	473, 1873, 2098, 2350, 2893
AclWI	GGATC	4 cut(s)	1997, 2010, 2296, 2984
AcoI	YGGCCR	3 cut(s)	1874, 2703, 2962
AcsI	RAATTY	5 cut(s)	235, 557, 715, 1098, 1326
AcuI	CTGAAG	1 cut(s)	2282
AfaI	GTAC	3 cut(s)	692, 2091, 2951
AfiI	CCNNNNNNNGG	8 cut(s)	593, 1050, 1081, 1358, 1364, 1594, 1911, 2219
AflIII	ACRYGT	3 cut(s)	1581, 2409, 2493
AjnI	CCWGG	4 cut(s)	849, 1357, 2467, 2700
AjuI	GAANNNNNNNTTGG	4 cut(s)	1068, 1100, 2202, 2234
AleI	CACNNNNGTG	1 cut(s)	2866
AloI	GAACNNNNNNTCC	4 cut(s)	2124, 2156, 2165, 2197
Alw21I	GWGCWC	3 cut(s)	768, 2644, 3007
Alw26I	GTCTC	9 cut(s)	11, 106, 170, 834, 2017, 2052, 2251, 2280, 2949
AlwI	GGATC	4 cut(s)	1997, 2010, 2296, 2984
AlwNI	CAGNNNCTG	2 cut(s)	293, 2260
Ama87I	CYCGRG	1 cut(s)	2055
AoxI	GGCC	4 cut(s)	1246, 1874, 2703, 2962
ApeKI	GCWGC	6 cut(s)	132, 307, 1810, 2651, 2759, 2819
ApoI	RAATTY	5 cut(s)	235, 557, 715, 1098, 1326
ArsI	GACNNNNNNTTYG	2 cut(s)	256, 288
Asp700I	GAANNNNTTC	1 cut(s)	1366
Asp718I	GGTACC	1 cut(s)	2949
AspLEI	GCGC	2 cut(s)	2698, 2738
AspS9I	GGNCC	3 cut(s)	436, 682, 1246
AsuC2I	CCSGG	2 cut(s)	588, 1596
AsuHPI	GGTGA	7 cut(s)	920, 1247, 1843, 2339, 2446, 2675, 2956
AvaI	CYCGRG	1 cut(s)	2055
AvaII	GGWCC	2 cut(s)	436, 682
AxyI	CCTNAGG	1 cut(s)	2885
BaeGI	GKGCMC	1 cut(s)	2406
BalI	TGGCCA	1 cut(s)	2964
BamHI	GGATCC	1 cut(s)	2002
BanI	GGYRCC	2 cut(s)	2587, 2949
BanII	GRGCYC	2 cut(s)	258, 2644
Bbv12I	GWGCWC	3 cut(s)	768, 2644, 3007
BbvI	GCAGC	6 cut(s)	119, 294, 1822, 2638, 2771, 2831
BccI	CCATC	9 cut(s)	245, 802, 1123, 1456, 1509, 2156, 2533, 2653, 2954
BcgI	CGANNNNNNTGC	2 cut(s)	1745, 1779
BciT130I	CCWGG	4 cut(s)	851, 1359, 2469, 2702
BciVI	GTATCC	1 cut(s)	631
BclI	TGATCA	1 cut(s)	2451
BcnI	CCSGG	2 cut(s)	588, 1596
BcoDI	GTCTC	9 cut(s)	11, 106, 170, 834, 2017, 2052, 2251, 2280, 2949
BfaI	CTAG	7 cut(s)	452, 969, 1262, 1395, 1403, 2442, 2648
BfmI	CTRYAG	6 cut(s)	308, 1149, 1343, 1968, 2252, 2980
BfuAI	ACCTGC	4 cut(s)	362, 799, 1538, 2548
BfuI	GTATCC	1 cut(s)	631
BglII	AGATCT	2 cut(s)	446, 2848
BisI	GCNGC	7 cut(s)	133, 308, 1811, 1874, 2652, 2760, 2820
BlpI	GCTNAGC	1 cut(s)	2340
BlsI	GCNGC	7 cut(s)	134, 309, 1812, 1875, 2653, 2761, 2821
BmcAI	AGTACT	2 cut(s)	692, 2091
Bme1390I	CCNGG	6 cut(s)	588, 851, 1359, 1596, 2469, 2702
Bme18I	GGWCC	2 cut(s)	436, 682
BmeT110I	CYCGRG	1 cut(s)	2055
BmgT120I	GGNCC	3 cut(s)	436, 682, 1246
BmiI	GGNNCC	5 cut(s)	1086, 2004, 2466, 2589, 2951
BmrFI	CCNGG	6 cut(s)	588, 851, 1359, 1596, 2469, 2702
BmrI	ACTGGG	3 cut(s)	455, 1208, 1739
BmuI	ACTGGG	3 cut(s)	455, 1208, 1739
BpmI	CTGGAG	2 cut(s)	671, 1036
Bpu10I	CCTNAGC	1 cut(s)	698
Bpu1102I	GCTNAGC	1 cut(s)	2340
BpuEI	CTTGAG	5 cut(s)	130, 1697, 2112, 2615, 2815
BpuMI	CCSGG	2 cut(s)	588, 1596
Bsa29I	ATCGAT	2 cut(s)	210, 1755
BsaBI	GATNNNNATC	1 cut(s)	210
BsaI	GGTCTC	1 cut(s)	2052
BsaJI	CCNNGG	6 cut(s)	194, 587, 850, 1843, 2305, 2583
Bsc4I	CCNNNNNNNGG	8 cut(s)	593, 1050, 1081, 1358, 1364, 1594, 1911, 2219
Bse1I	ACTGG	9 cut(s)	461, 624, 688, 698, 1019, 1203, 1734, 2187, 2911
Bse21I	CCTNAGG	1 cut(s)	2885
Bse3DI	GCAATG	6 cut(s)	672, 743, 994, 1463, 1931, 1952
Bse8I	GATNNNNATC	1 cut(s)	210
BseBI	CCWGG	4 cut(s)	851, 1359, 2469, 2702
BseCI	ATCGAT	2 cut(s)	210, 1755
BseDI	CCNNGG	6 cut(s)	194, 587, 850, 1843, 2305, 2583
BseGI	GGATG	5 cut(s)	8, 52, 1416, 1803, 2664
BseJI	GATNNNNATC	1 cut(s)	210
BseLI	CCNNNNNNNGG	8 cut(s)	593, 1050, 1081, 1358, 1364, 1594, 1911, 2219
BseMI	GCAATG	6 cut(s)	672, 743, 994, 1463, 1931, 1952
BseMII	CTCAG	6 cut(s)	712, 1299, 2025, 2139, 2331, 3013
BseNI	ACTGG	9 cut(s)	461, 624, 688, 698, 1019, 1203, 1734, 2187, 2911
BseRI	GAGGAG	1 cut(s)	1273
BseSI	GKGCMC	1 cut(s)	2406
BseXI	GCAGC	6 cut(s)	119, 294, 1822, 2638, 2771, 2831
BseYI	CCCAGC	2 cut(s)	1243, 2654
BsgI	GTGCAG	1 cut(s)	2078
BshFI	GGCC	4 cut(s)	1248, 1876, 2705, 2964
BshNI	GGYRCC	2 cut(s)	2587, 2949
BshVI	ATCGAT	2 cut(s)	210, 1755
BsiHKAI	GWGCWC	3 cut(s)	768, 2644, 3007
BsiHKCI	CYCGRG	1 cut(s)	2055
BsiSI	CCGG	2 cut(s)	587, 1595
BslFI	GGGAC	3 cut(s)	950, 1075, 2761
BslI	CCNNNNNNNGG	8 cut(s)	593, 1050, 1081, 1358, 1364, 1594, 1911, 2219
BsmAI	GTCTC	9 cut(s)	11, 106, 170, 834, 2017, 2052, 2251, 2280, 2949
BsmBI	CGTCTC	1 cut(s)	2949
BsmFI	GGGAC	3 cut(s)	950, 1075, 2761
BsmI	GAATGC	4 cut(s)	106, 667, 1541, 2482
BsnI	GGCC	4 cut(s)	1248, 1876, 2705, 2964
Bso31I	GGTCTC	1 cut(s)	2052
BsoBI	CYCGRG	1 cut(s)	2055
Bsp1286I	GDGCHC	5 cut(s)	258, 768, 2406, 2644, 3007
Bsp1720I	GCTNAGC	1 cut(s)	2340
Bsp19I	CCATGG	1 cut(s)	1843
BspACI	CCGC	5 cut(s)	473, 1873, 2098, 2350, 2893
BspANI	GGCC	4 cut(s)	1248, 1876, 2705, 2964
BspCNI	CTCAG	6 cut(s)	711, 1298, 2024, 2140, 2332, 3012
BspDI	ATCGAT	2 cut(s)	210, 1755
BspHI	TCATGA	2 cut(s)	2107, 2607
BspLI	GGNNCC	5 cut(s)	1086, 2004, 2466, 2589, 2951
BspMAI	CTGCAG	3 cut(s)	312, 1972, 2256
BspMI	ACCTGC	4 cut(s)	362, 799, 1538, 2548
BspPI	GGATC	4 cut(s)	1997, 2010, 2296, 2984
BspQI	GCTCTTC	1 cut(s)	2487
BspT107I	GGYRCC	2 cut(s)	2587, 2949
BspTNI	GGTCTC	1 cut(s)	2052
BsrBI	CCGCTC	1 cut(s)	2893
BsrDI	GCAATG	6 cut(s)	672, 743, 994, 1463, 1931, 1952
BsrI	ACTGG	9 cut(s)	461, 624, 688, 698, 1019, 1203, 1734, 2187, 2911
BssECI	CCNNGG	6 cut(s)	194, 587, 850, 1843, 2305, 2583
BssT1I	CCWWGG	4 cut(s)	194, 1843, 2305, 2583
Bst2UI	CCWGG	4 cut(s)	851, 1359, 2469, 2702
Bst4CI	ACNGT	8 cut(s)	328, 484, 877, 886, 952, 1673, 2206, 2575
Bst6I	CTCTTC	4 cut(s)	672, 2385, 2487, 2506
BstAPI	GCANNNNNTGC	2 cut(s)	316, 742
BstC8I	GCNNGC	5 cut(s)	471, 743, 1041, 1768, 2199
BstDSI	CCRYGG	1 cut(s)	1843
BstF5I	GGATG	5 cut(s)	8, 52, 1416, 1803, 2664
BstHHI	GCGC	2 cut(s)	2698, 2738
BstMAI	GTCTC	9 cut(s)	11, 106, 170, 834, 2017, 2052, 2251, 2280, 2949
BstMWI	GCNNNNNNNGC	8 cut(s)	316, 742, 1045, 2648, 2702, 2735, 2750, 2759
BstNI	CCWGG	4 cut(s)	851, 1359, 2469, 2702
BstNSI	RCATGY	8 cut(s)	319, 745, 1585, 1770, 1981, 2413, 2497, 2525
BstSCI	CCNGG	6 cut(s)	586, 849, 1357, 1594, 2467, 2700
BstSFI	CTRYAG	6 cut(s)	308, 1149, 1343, 1968, 2252, 2980
BstSLI	GKGCMC	1 cut(s)	2406
BstV1I	GCAGC	6 cut(s)	119, 294, 1822, 2638, 2771, 2831
BstX2I	RGATCY	5 cut(s)	446, 2002, 2301, 2848, 2976
BstXI	CCANNNNNNTGG	1 cut(s)	1515
BstYI	RGATCY	5 cut(s)	446, 2002, 2301, 2848, 2976
Bsu15I	ATCGAT	2 cut(s)	210, 1755
Bsu36I	CCTNAGG	1 cut(s)	2885
BsuI	GTATCC	1 cut(s)	631
BsuRI	GGCC	4 cut(s)	1248, 1876, 2705, 2964
BsuTUI	ATCGAT	2 cut(s)	210, 1755
BtgI	CCRYGG	1 cut(s)	1843
BtsCI	GGATG	5 cut(s)	8, 52, 1416, 1803, 2664
BtsI	GCAGTG	3 cut(s)	227, 1055, 2873
BtsIMutI	CAGTG	7 cut(s)	227, 333, 882, 915, 1055, 2194, 2873
BveI	ACCTGC	4 cut(s)	362, 799, 1538, 2548
Cac8I	GCNNGC	5 cut(s)	471, 743, 1041, 1768, 2199
CaiI	CAGNNNCTG	2 cut(s)	293, 2260
CciI	TCATGA	2 cut(s)	2107, 2607
CfoI	GCGC	2 cut(s)	2698, 2738
Cfr13I	GGNCC	3 cut(s)	436, 682, 1246
ClaI	ATCGAT	2 cut(s)	210, 1755
Csp6I	GTAC	3 cut(s)	691, 2090, 2950
CviQI	GTAC	3 cut(s)	691, 2090, 2950
EaeI	YGGCCR	3 cut(s)	1874, 2703, 2962
Eam1104I	CTCTTC	4 cut(s)	672, 2385, 2487, 2506
EarI	CTCTTC	4 cut(s)	672, 2385, 2487, 2506
Ecl136II	GAGCTC	1 cut(s)	2642
Eco130I	CCWWGG	4 cut(s)	194, 1843, 2305, 2583
Eco24I	GRGCYC	2 cut(s)	258, 2644
Eco31I	GGTCTC	1 cut(s)	2052
Eco32I	GATATC	3 cut(s)	208, 2105, 2839
Eco47I	GGWCC	2 cut(s)	436, 682
Eco53kI	GAGCTC	1 cut(s)	2642
Eco57I	CTGAAG	1 cut(s)	2282
Eco81I	CCTNAGG	1 cut(s)	2885
Eco88I	CYCGRG	1 cut(s)	2055
EcoICRI	GAGCTC	1 cut(s)	2642
EcoO109I	RGGNCCY	1 cut(s)	682
EcoRI	GAATTC	2 cut(s)	557, 1098
EcoRII	CCWGG	4 cut(s)	849, 1357, 2467, 2700
EcoRV	GATATC	3 cut(s)	208, 2105, 2839
EcoT14I	CCWWGG	4 cut(s)	194, 1843, 2305, 2583
EcoT22I	ATGCAT	2 cut(s)	743, 2523
EcoT38I	GRGCYC	2 cut(s)	258, 2644
ErhI	CCWWGG	4 cut(s)	194, 1843, 2305, 2583
Esp3I	CGTCTC	1 cut(s)	2949
FalI	AAGNNNNNCTT	3 cut(s)	2918, 2950, 3012
FaqI	GGGAC	3 cut(s)	950, 1075, 2761
FbaI	TGATCA	1 cut(s)	2451
FblI	GTMKAC	1 cut(s)	1342
Fnu4HI	GCNGC	7 cut(s)	133, 308, 1811, 1874, 2652, 2760, 2820
FokI	GGATG	4 cut(s)	59, 1423, 1790, 2671
FriOI	GRGCYC	2 cut(s)	258, 2644
Fsp4HI	GCNGC	7 cut(s)	133, 308, 1811, 1874, 2652, 2760, 2820
FspBI	CTAG	7 cut(s)	452, 969, 1262, 1395, 1403, 2442, 2648
FspI	TGCGCA	1 cut(s)	2697
GlaI	GCGC	2 cut(s)	2697, 2737
GluI	GCNGC	7 cut(s)	133, 308, 1811, 1874, 2652, 2760, 2820
GsaI	CCCAGC	2 cut(s)	1247, 2658
GsuI	CTGGAG	2 cut(s)	671, 1036
HaeIII	GGCC	4 cut(s)	1248, 1876, 2705, 2964
HapII	CCGG	2 cut(s)	587, 1595
HhaI	GCGC	2 cut(s)	2698, 2738
Hin6I	GCGC	2 cut(s)	2696, 2736
HinP1I	GCGC	2 cut(s)	2696, 2736
HincII	GTYRAC	1 cut(s)	862
HindII	GTYRAC	1 cut(s)	862
HindIII	AAGCTT	1 cut(s)	422
HpaII	CCGG	2 cut(s)	587, 1595
HphI	GGTGA	7 cut(s)	920, 1247, 1843, 2339, 2446, 2675, 2956
Hpy166II	GTNNAC	7 cut(s)	436, 457, 820, 862, 882, 917, 1343
Hpy8I	GTNNAC	7 cut(s)	436, 457, 820, 862, 882, 917, 1343
Hpy99I	CGWCG	1 cut(s)	1146
HpyAV	CCTTC	8 cut(s)	277, 941, 1048, 1075, 1172, 1487, 2729, 2796
HpyCH4III	ACNGT	8 cut(s)	328, 484, 877, 886, 952, 1673, 2206, 2575
HpyF10VI	GCNNNNNNNGC	8 cut(s)	316, 742, 1045, 2648, 2702, 2735, 2750, 2759
HspAI	GCGC	2 cut(s)	2696, 2736
KpnI	GGTACC	1 cut(s)	2953
Ksp22I	TGATCA	1 cut(s)	2451
LguI	GCTCTTC	1 cut(s)	2487
Lsp1109I	GCAGC	6 cut(s)	119, 294, 1822, 2638, 2771, 2831
MaeI	CTAG	7 cut(s)	452, 969, 1262, 1395, 1403, 2442, 2648
MaeIII	GTNAC	6 cut(s)	153, 754, 1397, 1433, 1745, 2368
MbiI	CCGCTC	1 cut(s)	2893
MfeI	CAATTG	1 cut(s)	2784
MflI	RGATCY	5 cut(s)	446, 2002, 2301, 2848, 2976
MhlI	GDGCHC	5 cut(s)	258, 768, 2406, 2644, 3007
MlsI	TGGCCA	1 cut(s)	2964
MluNI	TGGCCA	1 cut(s)	2964
MlyI	GAGTC	6 cut(s)	19, 972, 1357, 1809, 2325, 2481
MmeI	TCCRAC	2 cut(s)	466, 2752
Mox20I	TGGCCA	1 cut(s)	2964
Mph1103I	ATGCAT	2 cut(s)	743, 2523
MroXI	GAANNNNTTC	1 cut(s)	1366
MscI	TGGCCA	1 cut(s)	2964
MseI	TTAA	4 cut(s)	56, 1181, 1419, 1523
MslI	CAYNNNNRTG	4 cut(s)	597, 1513, 2459, 2866
Msp20I	TGGCCA	1 cut(s)	2964
MspA1I	CMGCKG	1 cut(s)	1942
MspI	CCGG	2 cut(s)	587, 1595
MspR9I	CCNGG	6 cut(s)	588, 851, 1359, 1596, 2469, 2702
MunI	CAATTG	1 cut(s)	2784
Mva1269I	GAATGC	4 cut(s)	106, 667, 1541, 2482
MvaI	CCWGG	4 cut(s)	851, 1359, 2469, 2702
MwoI	GCNNNNNNNGC	8 cut(s)	316, 742, 1045, 2648, 2702, 2735, 2750, 2759
NciI	CCSGG	2 cut(s)	588, 1596
NcoI	CCATGG	1 cut(s)	1843
NlaIV	GGNNCC	5 cut(s)	1086, 2004, 2466, 2589, 2951
NmuCI	GTSAC	3 cut(s)	754, 1397, 2368
NsbI	TGCGCA	1 cut(s)	2697
NsiI	ATGCAT	2 cut(s)	743, 2523
NspI	RCATGY	8 cut(s)	319, 745, 1585, 1770, 1981, 2413, 2497, 2525
OliI	CACNNNNGTG	1 cut(s)	2866
PaeI	GCATGC	2 cut(s)	745, 1770
PagI	TCATGA	2 cut(s)	2107, 2607
PciI	ACATGT	3 cut(s)	1581, 2409, 2493
PciSI	GCTCTTC	1 cut(s)	2487
PctI	GAATGC	4 cut(s)	106, 667, 1541, 2482
PdmI	GAANNNNTTC	1 cut(s)	1366
PfeI	GAWTC	7 cut(s)	538, 972, 1299, 1571, 1599, 1710, 2708
PflFI	GACNNNGTC	1 cut(s)	782
PflMI	CCANNNNNTGG	3 cut(s)	1050, 1358, 2219
PfoI	TCCNGGA	2 cut(s)	1357, 2467
PkrI	GCNGC	7 cut(s)	134, 309, 1812, 1875, 2653, 2761, 2821
PleI	GAGTC	6 cut(s)	19, 971, 1356, 1808, 2325, 2481
PpsI	GAGTC	6 cut(s)	19, 971, 1356, 1808, 2325, 2481
PpuMI	RGGWCCY	1 cut(s)	682
PscI	ACATGT	3 cut(s)	1581, 2409, 2493
PsiI	TTATAA	1 cut(s)	1817
Psp124BI	GAGCTC	1 cut(s)	2644
Psp5II	RGGWCCY	1 cut(s)	682
Psp6I	CCWGG	4 cut(s)	849, 1357, 2467, 2700
PspFI	CCCAGC	2 cut(s)	1243, 2654
PspGI	CCWGG	4 cut(s)	849, 1357, 2467, 2700
PspN4I	GGNNCC	5 cut(s)	1086, 2004, 2466, 2589, 2951
PspPI	GGNCC	3 cut(s)	436, 682, 1246
PspPPI	RGGWCCY	1 cut(s)	682
PstI	CTGCAG	3 cut(s)	312, 1972, 2256
PstNI	CAGNNNCTG	2 cut(s)	293, 2260
PsuI	RGATCY	5 cut(s)	446, 2002, 2301, 2848, 2976
PsyI	GACNNNGTC	1 cut(s)	782
PvuII	CAGCTG	1 cut(s)	1942
RsaI	GTAC	3 cut(s)	692, 2091, 2951
RsaNI	GTAC	3 cut(s)	691, 2090, 2950
RseI	CAYNNNNRTG	4 cut(s)	597, 1513, 2459, 2866
SacI	GAGCTC	1 cut(s)	2644
SapI	GCTCTTC	1 cut(s)	2487
SaqAI	TTAA	4 cut(s)	56, 1181, 1419, 1523
SatI	GCNGC	7 cut(s)	133, 308, 1811, 1874, 2652, 2760, 2820
Sau96I	GGNCC	3 cut(s)	436, 682, 1246
ScaI	AGTACT	2 cut(s)	692, 2091
SchI	GAGTC	6 cut(s)	19, 972, 1357, 1809, 2325, 2481
ScrFI	CCNGG	6 cut(s)	588, 851, 1359, 1596, 2469, 2702
SduI	GDGCHC	5 cut(s)	258, 768, 2406, 2644, 3007
SfcI	CTRYAG	6 cut(s)	308, 1149, 1343, 1968, 2252, 2980
SinI	GGWCC	2 cut(s)	436, 682
SmiMI	CAYNNNNRTG	4 cut(s)	597, 1513, 2459, 2866
SmlI	CTYRAG	5 cut(s)	109, 1676, 2127, 2630, 2830
SmoI	CTYRAG	5 cut(s)	109, 1676, 2127, 2630, 2830
SphI	GCATGC	2 cut(s)	745, 1770
SsiI	CCGC	5 cut(s)	473, 1873, 2098, 2350, 2893
SspI	AATATT	1 cut(s)	399
SspMI	CTAG	7 cut(s)	452, 969, 1262, 1395, 1403, 2442, 2648
SstI	GAGCTC	1 cut(s)	2644
StyD4I	CCNGG	6 cut(s)	586, 849, 1357, 1594, 2467, 2700
StyI	CCWWGG	4 cut(s)	194, 1843, 2305, 2583
TaaI	ACNGT	8 cut(s)	328, 484, 877, 886, 952, 1673, 2206, 2575
TaqI	TCGA	7 cut(s)	210, 218, 1425, 1609, 1755, 2485, 2562
TaqII	GACCGA	2 cut(s)	1092, 1138
TatI	WGTACW	2 cut(s)	690, 2089
TauI	GCSGC	1 cut(s)	1876
TfiI	GAWTC	7 cut(s)	538, 972, 1299, 1571, 1599, 1710, 2708
Tru1I	TTAA	4 cut(s)	56, 1181, 1419, 1523
Tru9I	TTAA	4 cut(s)	56, 1181, 1419, 1523
TscAI	CASTG	7 cut(s)	234, 333, 882, 915, 1055, 2194, 2873
TseFI	GTSAC	3 cut(s)	754, 1397, 2368
TseI	GCWGC	6 cut(s)	132, 307, 1810, 2651, 2759, 2819
Tsp45I	GTSAC	3 cut(s)	754, 1397, 2368
TspGWI	ACGGA	1 cut(s)	1077
TspRI	CASTG	7 cut(s)	234, 333, 882, 915, 1055, 2194, 2873
Tth111I	GACNNNGTC	1 cut(s)	782
Van91I	CCANNNNNTGG	3 cut(s)	1050, 1358, 2219
VpaK11BI	GGWCC	2 cut(s)	436, 682
XapI	RAATTY	5 cut(s)	235, 557, 715, 1098, 1326
XceI	RCATGY	8 cut(s)	319, 745, 1585, 1770, 1981, 2413, 2497, 2525
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1047
XmiI	GTMKAC	1 cut(s)	1342
XmnI	GAANNNNTTC	1 cut(s)	1366
XspI	CTAG	7 cut(s)	452, 969, 1262, 1395, 1403, 2442, 2648
ZrmI	AGTACT	2 cut(s)	692, 2091
Zsp2I	ATGCAT	2 cut(s)	743, 2523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.