Rmu_sc0016534.1_g000002

Zinc transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016534.1
Physical Location & Seq
Reverse (-)
3120 .. 6389
3270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016534.1_g000002.1.cds

Sequence Viewer

Length: 1983 bp
atgtgcaactgttactgtattactgatgtagtggtacctcttttgaaattggcaggggcacaccggggcacatcatcaaaccacgaggggtggcttcgaactggagaagtggccttggatggtttgatagagcgcggcatatctgatagcatccaagagaagaatatagcgtgtacctcccaaaattatgaaactgaagttgtgatctggaaagctgtgttgttttcactcctcttcgtggttctatttgggtatgctacagccgagtctgaagaagaggtttcacggaagttgatatctgctccgcacaagaatgtgagaactaatgttattgatggcactggtaatgagaataccttaggttttgaggatataaataatgggatcggtgagacaaagggcgggaacagcaaggtctcaatctccactgttgcattgtttacgctggcaatggctgctgccactggtttaggtgcagtgccattcttctttgtggagcttgatccgcaatgggctggactctgcaatggaatggctgctggtgtgatgttggctgcgagctttgatcttatacaggaagggcaaggtcatggagcagggaattgggtggtctttgggattctagctgggggaatttttattttgctttgcaagaagtttctcgaacaatatggagaggttagtatgttggacattaaaggtgcagatgcaactaaagtagttcttgtgattggaataatgactcttcattcatttggggagggctctggtgttggggtttcctttgctggttcaaagggtttctctcagggccttttggtaactttggctattgctgttcacaatataccagaaggattagctgtaagtatggtgcttgcatcaaggggtgtttcaccacagaatgccatgttatggagtgtaattacgtcattgccacagccaattgtagcagttccttcattcatgtgcgctgatgcatttagcaagttccttcctttctgtacgggatttgctgctggatgtatgatctggatggttgttgaagaggtgcttcctgatgcatttaaggaagcctctccatcacatgttgcatctgcagctactctctctgttgcattcatggaagcacttagtactctttttcagagtttcagccatgactacaattcagaggatgcttctggcttctttgtttcattgctttttggtcttgggccattgcttggtggcatggtccttgttgcatttgcacttgctttccgtttccagcatgctcttctcatgggtgcggcatctggcattgcctttgtccttggtgcctggcgaccgtcgcagctacttttctcctcaaagatgggatttttccctcttattttgctgcttgccttgggagctgcatctgtccatactttgagctctagtattctgaagcttgcaggtcgcaaaaaaacttcagtgcataatttgccaacagtaactggtttccccgtgagtgttcacaccctccagtcattcttgtcctgtggagcagttgctcttcacgctttggctgaagggcttgcactaggggttgctgctccaaaagcttatggacttggtcggcatatggttcttcctgtctccctccatggactccctcgaggtgcagctgtggctagctgcatcttcggggctacagataactggcaggggtcccttgcggctgctgctttaattggattcatgggtccaatatctgcaattggagcaatacttgcaggaattgactatagcggtctagaccatgtcatggtgtttgcttgtgggggactactcccaagttttggaaatgtagtaaggagagcagggagattggatatgcgaaaaagcagttgtgggcttctgatgggtatggtttttgcaactttgtgtttgacttgcaccaagttggtttgcttgcacacaccttattgcaattctgcacctgaggctgtcagatag

Protein Analysis

660

Amino Acids

68.99

Weight (kDa)

6.28

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011912)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1641
Acc36I ACCTGC 1 cut(s) 1430
Acc65I GGTACC 1 cut(s) 34
AccB1I GGYRCC 2 cut(s) 34, 1319
AccB7I CCANNNNNTGG 4 cut(s) 915, 1226, 1792, 1826
AccII CGCG 1 cut(s) 135
AciI CCGC 7 cut(s) 135, 305, 402, 506, 1292, 1703, 1776
AclWI GGATC 2 cut(s) 392, 497
AcsI RAATTY 1 cut(s) 633
AcuI CTGAAG 5 cut(s) 216, 291, 1440, 1451, 1575
AfaI GTAC 4 cut(s) 36, 175, 1006, 1138
AfiI CCNNNNNNNGG 5 cut(s) 238, 915, 1226, 1792, 1826
AflIII ACRYGT 1 cut(s) 1087
AgsI TTSAA 3 cut(s) 46, 795, 1046
AjnI CCWGG 1 cut(s) 1322
Alw21I GWGCWC 1 cut(s) 1421
Alw26I GTCTC 3 cut(s) 386, 421, 1627
AlwI GGATC 2 cut(s) 392, 497
AlwNI CAGNNNCTG 1 cut(s) 1481
Ama87I CYCGRG 1 cut(s) 1641
AoxI GGCC 3 cut(s) 111, 811, 1217
ApoI RAATTY 1 cut(s) 633
Asp718I GGTACC 1 cut(s) 34
AspLEI GCGC 2 cut(s) 135, 974
AspS9I GGNCC 5 cut(s) 811, 1217, 1237, 1695, 1730
AsuC2I CCSGG 1 cut(s) 65
AsuHPI GGTGA 2 cut(s) 401, 888
AsuII TTCGAA 1 cut(s) 97
AsuNHI GCTAGC 1 cut(s) 1658
AvaI CYCGRG 1 cut(s) 1641
AvaII GGWCC 3 cut(s) 1237, 1695, 1730
AxyI CCTNAGG 2 cut(s) 358, 1968
BaeGI GKGCMC 2 cut(s) 61, 71
BanI GGYRCC 2 cut(s) 34, 1319
BanII GRGCYC 2 cut(s) 767, 1421
BauI CACGAG 1 cut(s) 83
Bbv12I GWGCWC 1 cut(s) 1421
BccI CCATC 6 cut(s) 113, 329, 1030, 1090, 1351, 1882
BciT130I CCWGG 1 cut(s) 1324
BcnI CCSGG 1 cut(s) 65
BcoDI GTCTC 3 cut(s) 386, 421, 1627
BfaI CTAG 5 cut(s) 623, 1422, 1568, 1659, 1781
BfmI CTRYAG 4 cut(s) 258, 1098, 1677, 1771
BfuAI ACCTGC 1 cut(s) 1430
BmcAI AGTACT 1 cut(s) 1138
Bme1390I CCNGG 2 cut(s) 65, 1324
Bme18I GGWCC 3 cut(s) 1237, 1695, 1730
BmeT110I CYCGRG 1 cut(s) 1641
BmgT120I GGNCC 5 cut(s) 811, 1217, 1237, 1695, 1730
BmiI GGNNCC 5 cut(s) 36, 1321, 1696, 1697, 1731
BmrFI CCNGG 2 cut(s) 65, 1324
BmtI GCTAGC 1 cut(s) 1662
BpmI CTGGAG 2 cut(s) 123, 1493
Bpu14I TTCGAA 1 cut(s) 97
BpuMI CCSGG 1 cut(s) 65
BsaI GGTCTC 1 cut(s) 421
BsaJI CCNNGG 5 cut(s) 64, 114, 1315, 1389, 1630
Bsc4I CCNNNNNNNGG 5 cut(s) 238, 915, 1226, 1792, 1826
Bse1I ACTGG 6 cut(s) 106, 346, 469, 1486, 1510, 1691
Bse21I CCTNAGG 2 cut(s) 358, 1968
Bse3DI GCAATG 7 cut(s) 456, 515, 532, 932, 1199, 1220, 1302
BseBI CCWGG 1 cut(s) 1324
BseDI CCNNGG 5 cut(s) 64, 114, 1315, 1389, 1630
BseGI GGATG 5 cut(s) 124, 150, 1028, 1041, 1183
BseLI CCNNNNNNNGG 5 cut(s) 238, 915, 1226, 1792, 1826
BseMI GCAATG 7 cut(s) 456, 515, 532, 932, 1199, 1220, 1302
BseMII CTCAG 2 cut(s) 821, 1959
BseNI ACTGG 6 cut(s) 106, 346, 469, 1486, 1510, 1691
BseRI GAGGAG 2 cut(s) 221, 1339
BseSI GKGCMC 2 cut(s) 61, 71
BseYI CCCAGC 1 cut(s) 626
BsgI GTGCAG 4 cut(s) 495, 723, 1668, 1947
Bsh1236I CGCG 1 cut(s) 135
Bsh1285I CGRYCG 1 cut(s) 1331
BshFI GGCC 3 cut(s) 113, 813, 1219
BshNI GGYRCC 2 cut(s) 34, 1319
BsiEI CGRYCG 1 cut(s) 1331
BsiHKAI GWGCWC 1 cut(s) 1421
BsiHKCI CYCGRG 1 cut(s) 1641
BsiSI CCGG 1 cut(s) 64
BslFI GGGAC 2 cut(s) 1681, 1824
BslI CCNNNNNNNGG 5 cut(s) 238, 915, 1226, 1792, 1826
BsmAI GTCTC 3 cut(s) 386, 421, 1627
BsmFI GGGAC 2 cut(s) 1681, 1824
BsmI GAATGC 2 cut(s) 910, 1118
BsnI GGCC 3 cut(s) 113, 813, 1219
Bso31I GGTCTC 1 cut(s) 421
BsoBI CYCGRG 1 cut(s) 1641
Bsp119I TTCGAA 1 cut(s) 97
Bsp1286I GDGCHC 4 cut(s) 61, 71, 767, 1421
Bsp143I GATC 5 cut(s) 204, 384, 502, 565, 1029
Bsp19I CCATGG 1 cut(s) 1630
BspACI CCGC 7 cut(s) 135, 305, 402, 506, 1292, 1703, 1776
BspANI GGCC 3 cut(s) 113, 813, 1219
BspCNI CTCAG 2 cut(s) 820, 1960
BspFNI CGCG 1 cut(s) 135
BspLI GGNNCC 5 cut(s) 36, 1321, 1696, 1697, 1731
BspMAI CTGCAG 1 cut(s) 1102
BspMI ACCTGC 1 cut(s) 1430
BspOI GCTAGC 1 cut(s) 1662
BspPI GGATC 2 cut(s) 392, 497
BspQI GCTCTTC 2 cut(s) 1284, 1545
BspT104I TTCGAA 1 cut(s) 97
BspT107I GGYRCC 2 cut(s) 34, 1319
BspTNI GGTCTC 1 cut(s) 421
BsrDI GCAATG 7 cut(s) 456, 515, 532, 932, 1199, 1220, 1302
BsrI ACTGG 6 cut(s) 106, 346, 469, 1486, 1510, 1691
BssECI CCNNGG 5 cut(s) 64, 114, 1315, 1389, 1630
BssMI GATC 5 cut(s) 204, 384, 502, 565, 1029
BssSI CACGAG 1 cut(s) 83
BssT1I CCWWGG 4 cut(s) 114, 1315, 1389, 1630
Bst2BI CACGAG 1 cut(s) 83
Bst2UI CCWGG 1 cut(s) 1324
Bst4CI ACNGT 5 cut(s) 11, 17, 430, 1332, 1477
Bst6I CTCTTC 6 cut(s) 239, 270, 750, 1041, 1284, 1545
BstAPI GCANNNNNTGC 3 cut(s) 455, 1468, 1757
BstBI TTCGAA 1 cut(s) 97
BstC8I GCNNGC 9 cut(s) 447, 559, 879, 1275, 1386, 1437, 1563, 1660, 1940
BstDEI CTNAG 4 cut(s) 358, 807, 1133, 1968
BstDSI CCRYGG 1 cut(s) 1630
BstF5I GGATG 5 cut(s) 124, 150, 1028, 1041, 1183
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 2 cut(s) 135, 974
BstKTI GATC 5 cut(s) 207, 387, 505, 568, 1032
BstMAI GTCTC 3 cut(s) 386, 421, 1627
BstMBI GATC 5 cut(s) 204, 384, 502, 565, 1029
BstMCI CGRYCG 1 cut(s) 1331
BstNI CCWGG 1 cut(s) 1324
BstNSI RCATGY 2 cut(s) 1091, 1277
BstSCI CCNGG 2 cut(s) 63, 1322
BstSFI CTRYAG 4 cut(s) 258, 1098, 1677, 1771
BstSLI GKGCMC 2 cut(s) 61, 71
BstUI CGCG 1 cut(s) 135
Bsu36I CCTNAGG 2 cut(s) 358, 1968
BsuRI GGCC 3 cut(s) 113, 813, 1219
BtgI CCRYGG 1 cut(s) 1630
BtsCI GGATG 5 cut(s) 124, 150, 1028, 1041, 1183
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 5 cut(s) 339, 426, 462, 483, 1464
BveI ACCTGC 1 cut(s) 1430
Cac8I GCNNGC 9 cut(s) 447, 559, 879, 1275, 1386, 1437, 1563, 1660, 1940
CaiI CAGNNNCTG 1 cut(s) 1481
CfoI GCGC 2 cut(s) 135, 974
Cfr13I GGNCC 5 cut(s) 811, 1217, 1237, 1695, 1730
Csp6I GTAC 4 cut(s) 35, 174, 1005, 1137
CviQI GTAC 4 cut(s) 35, 174, 1005, 1137
DdeI CTNAG 4 cut(s) 358, 807, 1133, 1968
DpnI GATC 5 cut(s) 206, 386, 504, 567, 1031
DpnII GATC 5 cut(s) 204, 384, 502, 565, 1029
Eam1104I CTCTTC 6 cut(s) 239, 270, 750, 1041, 1284, 1545
EarI CTCTTC 6 cut(s) 239, 270, 750, 1041, 1284, 1545
Ecl136II GAGCTC 1 cut(s) 1419
Eco130I CCWWGG 4 cut(s) 114, 1315, 1389, 1630
Eco24I GRGCYC 2 cut(s) 767, 1421
Eco31I GGTCTC 1 cut(s) 421
Eco32I GATATC 1 cut(s) 297
Eco47I GGWCC 3 cut(s) 1237, 1695, 1730
Eco53kI GAGCTC 1 cut(s) 1419
Eco57I CTGAAG 5 cut(s) 216, 291, 1440, 1451, 1575
Eco81I CCTNAGG 2 cut(s) 358, 1968
Eco88I CYCGRG 1 cut(s) 1641
EcoICRI GAGCTC 1 cut(s) 1419
EcoO109I RGGNCCY 2 cut(s) 811, 1695
EcoRII CCWGG 1 cut(s) 1322
EcoRV GATATC 1 cut(s) 297
EcoT14I CCWWGG 4 cut(s) 114, 1315, 1389, 1630
EcoT22I ATGCAT 2 cut(s) 982, 1066
EcoT38I GRGCYC 2 cut(s) 767, 1421
ErhI CCWWGG 4 cut(s) 114, 1315, 1389, 1630
FalI AAGNNNNNCTT 4 cut(s) 708, 740, 1038, 1070
FaqI GGGAC 2 cut(s) 1681, 1824
FauI CCCGC 1 cut(s) 395
FauNDI CATATG 1 cut(s) 1608
FokI GGATG 5 cut(s) 131, 137, 1035, 1048, 1190
FriOI GRGCYC 2 cut(s) 767, 1421
FspBI CTAG 5 cut(s) 623, 1422, 1568, 1659, 1781
GlaI GCGC 2 cut(s) 134, 973
GsaI CCCAGC 1 cut(s) 630
GsuI CTGGAG 2 cut(s) 123, 1493
HaeIII GGCC 3 cut(s) 113, 813, 1219
HapII CCGG 1 cut(s) 64
HhaI GCGC 2 cut(s) 135, 974
Hin6I GCGC 2 cut(s) 133, 972
HinP1I GCGC 2 cut(s) 133, 972
HindIII AAGCTT 2 cut(s) 1433, 1587
HinfI GANTC 6 cut(s) 266, 519, 619, 742, 1635, 1722
HpaII CCGG 1 cut(s) 64
HphI GGTGA 2 cut(s) 401, 888
Hpy166II GTNNAC 4 cut(s) 174, 441, 841, 1501
Hpy188I TCNGA 7 cut(s) 145, 271, 1149, 1174, 1431, 1887, 1979
Hpy188III TCNNGA 5 cut(s) 208, 662, 1033, 1058, 1781
Hpy8I GTNNAC 4 cut(s) 174, 441, 841, 1501
Hpy99I CGWCG 1 cut(s) 1336
HpyAV CCTTC 5 cut(s) 572, 848, 969, 1004, 1550
HpyCH4III ACNGT 5 cut(s) 11, 17, 430, 1332, 1477
HpyCH4IV ACGT 1 cut(s) 929
HpyF3I CTNAG 4 cut(s) 358, 807, 1133, 1968
HpySE526I ACGT 1 cut(s) 929
HspAI GCGC 2 cut(s) 133, 972
KflI GGGWCCC 1 cut(s) 1695
KpnI GGTACC 1 cut(s) 38
Kzo9I GATC 5 cut(s) 204, 384, 502, 565, 1029
LguI GCTCTTC 2 cut(s) 1284, 1545
LmnI GCTCC 7 cut(s) 307, 496, 593, 1394, 1529, 1585, 1748
MaeI CTAG 5 cut(s) 623, 1422, 1568, 1659, 1781
MaeII ACGT 1 cut(s) 929
MaeIII GTNAC 3 cut(s) 11, 820, 1477
MalI GATC 5 cut(s) 206, 386, 504, 567, 1031
MboI GATC 5 cut(s) 204, 384, 502, 565, 1029
MfeI CAATTG 2 cut(s) 945, 1743
MhlI GDGCHC 4 cut(s) 61, 71, 767, 1421
MlyI GAGTC 4 cut(s) 275, 513, 736, 1629
MmeI TCCRAC 1 cut(s) 669
Mph1103I ATGCAT 2 cut(s) 982, 1066
MseI TTAA 3 cut(s) 696, 1068, 1715
MslI CAYNNNNRTG 2 cut(s) 312, 967
MspA1I CMGCKG 1 cut(s) 1652
MspI CCGG 1 cut(s) 64
MspR9I CCNGG 2 cut(s) 65, 1324
MunI CAATTG 2 cut(s) 945, 1743
Mva1269I GAATGC 2 cut(s) 910, 1118
MvaI CCWGG 1 cut(s) 1324
MvnI CGCG 1 cut(s) 135
NciI CCSGG 1 cut(s) 65
NcoI CCATGG 1 cut(s) 1630
NdeI CATATG 1 cut(s) 1608
NdeII GATC 5 cut(s) 204, 384, 502, 565, 1029
NheI GCTAGC 1 cut(s) 1658
NlaIV GGNNCC 5 cut(s) 36, 1321, 1696, 1697, 1731
NmeAIII GCCGAG 1 cut(s) 289
NsiI ATGCAT 2 cut(s) 982, 1066
NspI RCATGY 2 cut(s) 1091, 1277
NspV TTCGAA 1 cut(s) 97
PaeI GCATGC 1 cut(s) 1277
PaeR7I CTCGAG 1 cut(s) 1641
PciI ACATGT 1 cut(s) 1087
PciSI GCTCTTC 2 cut(s) 1284, 1545
PctI GAATGC 2 cut(s) 910, 1118
PfeI GAWTC 2 cut(s) 619, 1722
PflFI GACNNNGTC 2 cut(s) 1599, 1787
PflMI CCANNNNNTGG 4 cut(s) 915, 1226, 1792, 1826
PleI GAGTC 4 cut(s) 274, 513, 736, 1629
PpsI GAGTC 4 cut(s) 274, 513, 736, 1629
PpuMI RGGWCCY 1 cut(s) 1695
PscI ACATGT 1 cut(s) 1087
Psp124BI GAGCTC 1 cut(s) 1421
Psp5II RGGWCCY 1 cut(s) 1695
Psp6I CCWGG 1 cut(s) 1322
PspFI CCCAGC 1 cut(s) 626
PspGI CCWGG 1 cut(s) 1322
PspN4I GGNNCC 5 cut(s) 36, 1321, 1696, 1697, 1731
PspPI GGNCC 5 cut(s) 811, 1217, 1237, 1695, 1730
PspPPI RGGWCCY 1 cut(s) 1695
PspXI VCTCGAGB 1 cut(s) 1641
PstI CTGCAG 1 cut(s) 1102
PstNI CAGNNNCTG 1 cut(s) 1481
PsyI GACNNNGTC 2 cut(s) 1599, 1787
PvuII CAGCTG 1 cut(s) 1652
RsaI GTAC 4 cut(s) 36, 175, 1006, 1138
RsaNI GTAC 4 cut(s) 35, 174, 1005, 1137
RseI CAYNNNNRTG 2 cut(s) 312, 967
SacI GAGCTC 1 cut(s) 1421
SapI GCTCTTC 2 cut(s) 1284, 1545
SaqAI TTAA 3 cut(s) 696, 1068, 1715
Sau3AI GATC 5 cut(s) 204, 384, 502, 565, 1029
Sau96I GGNCC 5 cut(s) 811, 1217, 1237, 1695, 1730
ScaI AGTACT 1 cut(s) 1138
SchI GAGTC 4 cut(s) 275, 513, 736, 1629
ScrFI CCNGG 2 cut(s) 65, 1324
SduI GDGCHC 4 cut(s) 61, 71, 767, 1421
SfcI CTRYAG 4 cut(s) 258, 1098, 1677, 1771
Sfr274I CTCGAG 1 cut(s) 1641
SfuI TTCGAA 1 cut(s) 97
SinI GGWCC 3 cut(s) 1237, 1695, 1730
SlaI CTCGAG 1 cut(s) 1641
SmiMI CAYNNNNRTG 2 cut(s) 312, 967
SmlI CTYRAG 1 cut(s) 1641
SmoI CTYRAG 1 cut(s) 1641
SphI GCATGC 1 cut(s) 1277
SsiI CCGC 7 cut(s) 135, 305, 402, 506, 1292, 1703, 1776
SspMI CTAG 5 cut(s) 623, 1422, 1568, 1659, 1781
SstI GAGCTC 1 cut(s) 1421
StyD4I CCNGG 2 cut(s) 63, 1322
StyI CCWWGG 4 cut(s) 114, 1315, 1389, 1630
TaaI ACNGT 5 cut(s) 11, 17, 430, 1332, 1477
TaiI ACGT 1 cut(s) 932
TaqI TCGA 3 cut(s) 97, 663, 1642
TatI WGTACW 1 cut(s) 1136
TauI GCSGC 3 cut(s) 138, 1295, 1706
TfiI GAWTC 2 cut(s) 619, 1722
Tru1I TTAA 3 cut(s) 696, 1068, 1715
Tru9I TTAA 3 cut(s) 696, 1068, 1715
TscAI CASTG 5 cut(s) 346, 433, 469, 483, 1464
TspDTI ATGAA 8 cut(s) 204, 737, 741, 951, 955, 1111, 1188, 1714
TspGWI ACGGA 2 cut(s) 301, 1253
TspRI CASTG 5 cut(s) 346, 433, 469, 483, 1464
Tth111I GACNNNGTC 2 cut(s) 1599, 1787
Van91I CCANNNNNTGG 4 cut(s) 915, 1226, 1792, 1826
VpaK11BI GGWCC 3 cut(s) 1237, 1695, 1730
XapI RAATTY 1 cut(s) 633
XbaI TCTAGA 1 cut(s) 1780
XceI RCATGY 2 cut(s) 1091, 1277
XhoI CTCGAG 1 cut(s) 1641
XspI CTAG 5 cut(s) 623, 1422, 1568, 1659, 1781
ZrmI AGTACT 1 cut(s) 1138
Zsp2I ATGCAT 2 cut(s) 982, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.