Rmu_sc0025107.1_g000001

Peroxisomal 2,4-dienoyl-CoA reductase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025107.1
Physical Location & Seq
Reverse (-)
1 .. 910
910 bp
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UTR
Exon/CDS
Intron
Rmu_sc0025107.1_g000001.1.cds

Sequence Viewer

Length: 186 bp
atggagtcaccattcaaggcggagatactgaagggcaaggtggcgttgttgaccggaggagcctcgggaattgggtacgagatatcagttcagttgggcaaacatggagcctccattgccgtcatgggtcgtcgtaaaaacgtcatcgactccgctgttgaatcccttcactcccttggcattccg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

62

Amino Acids

6.39

Weight (kDa)

9.3

Isoelectric Point (pI)

29.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 20, 153
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 1 cut(s) 77
AgsI TTSAA 2 cut(s) 16, 161
Ama87I CYCGRG 1 cut(s) 64
Asp700I GAANNNNTTC 1 cut(s) 165
AvaI CYCGRG 1 cut(s) 64
BceAI ACGGC 1 cut(s) 104
BmeT110I CYCGRG 1 cut(s) 64
BmiI GGNNCC 2 cut(s) 61, 109
BsaJI CCNNGG 2 cut(s) 63, 175
BsaWI WCCGGW 1 cut(s) 53
Bse3DI GCAATG 1 cut(s) 114
BseDI CCNNGG 2 cut(s) 63, 175
BseMI GCAATG 1 cut(s) 114
BseRI GAGGAG 1 cut(s) 72
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 1 cut(s) 54
BsmI GAATGC 1 cut(s) 180
BsoBI CYCGRG 1 cut(s) 64
BspACI CCGC 2 cut(s) 20, 153
BspLI GGNNCC 2 cut(s) 61, 109
BsrDI GCAATG 1 cut(s) 114
BssECI CCNNGG 2 cut(s) 63, 175
BssT1I CCWWGG 1 cut(s) 175
BstMWI GCNNNNNNNGC 1 cut(s) 116
Csp6I GTAC 1 cut(s) 76
CviAII CATG 2 cut(s) 104, 124
CviJI RGCY 2 cut(s) 62, 110
CviKI_1 RGCY 2 cut(s) 62, 110
CviQI GTAC 1 cut(s) 76
EciI GGCGGA 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 175
Eco32I GATATC 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 50
Eco88I CYCGRG 1 cut(s) 64
EcoRV GATATC 1 cut(s) 84
EcoT14I CCWWGG 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 175
FaeI CATG 2 cut(s) 107, 127
FaiI YATR 2 cut(s) 105, 125
FatI CATG 2 cut(s) 103, 123
HapII CCGG 1 cut(s) 54
Hin1II CATG 2 cut(s) 107, 127
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HinfI GANTC 3 cut(s) 5, 149, 161
HpaII CCGG 1 cut(s) 54
Hpy166II GTNNAC 1 cut(s) 51
Hpy188III TCNNGA 1 cut(s) 66
Hpy8I GTNNAC 1 cut(s) 51
Hpy99I CGWCG 1 cut(s) 135
HpyAV CCTTC 2 cut(s) 25, 176
HpyCH4IV ACGT 1 cut(s) 141
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpySE526I ACGT 1 cut(s) 141
Hsp92II CATG 2 cut(s) 107, 127
LmnI GCTCC 2 cut(s) 59, 107
LpnPI CCDG 1 cut(s) 67
MaeII ACGT 1 cut(s) 141
MaeIII GTNAC 1 cut(s) 6
MluCI AATT 1 cut(s) 69
MlyI GAGTC 2 cut(s) 14, 143
MnlI CCTC 3 cut(s) 50, 73, 121
MroXI GAANNNNTTC 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 155
MspI CCGG 1 cut(s) 54
Mva1269I GAATGC 1 cut(s) 180
MwoI GCNNNNNNNGC 1 cut(s) 116
NlaIII CATG 2 cut(s) 107, 127
NlaIV GGNNCC 2 cut(s) 61, 109
NmuCI GTSAC 1 cut(s) 6
PctI GAATGC 1 cut(s) 180
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 1 cut(s) 161
PleI GAGTC 2 cut(s) 13, 143
PpsI GAGTC 2 cut(s) 13, 143
PspN4I GGNNCC 2 cut(s) 61, 109
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SchI GAGTC 2 cut(s) 14, 143
SetI ASST 2 cut(s) 42, 144
SgeI CNNG 8 cut(s) 28, 49, 66, 76, 78, 91, 116, 136
Sse9I AATT 1 cut(s) 69
SsiI CCGC 2 cut(s) 20, 153
StyI CCWWGG 1 cut(s) 175
TaiI ACGT 1 cut(s) 144
TaqI TCGA 1 cut(s) 147
TasI AATT 1 cut(s) 69
TfiI GAWTC 1 cut(s) 161
TseFI GTSAC 1 cut(s) 6
Tsp45I GTSAC 1 cut(s) 6
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.