Rh2BG571800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
78798276 .. 78800611
2336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG571800.1

Sequence Viewer

Length: 258 bp
ATGCAGACGAATGGCTGCTTTTGTAGCATTACAAATTCGCTTGGAGAGAGCTTGGACAACAACTTAAACTTCAACTGTTATTTGTTGACTACAGGGAGGTTGCAGGGAGAGACAGTGGCAGCAGCTAGGAGAAGATCTGAAATTACTCCTGAGCTGGACAAGCACAATAACCAGATCAATACTATAAGGATAAATTCTCTTTGGAAGTTGGAGGTTATTGCAGGGATTAGAGTGAAAGTTCAGTTTAGCAACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

85

Amino Acids

9.62

Weight (kDa)

8.59

Isoelectric Point (pI)

28.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 34, 193
AgsI TTSAA 1 cut(s) 73
AluBI AGCT 3 cut(s) 51, 125, 154
AluI AGCT 3 cut(s) 51, 125, 154
Alw26I GTCTC 1 cut(s) 104
ApeKI GCWGC 3 cut(s) 15, 119, 122
ApoI RAATTY 2 cut(s) 34, 193
BbvI GCAGC 3 cut(s) 2, 131, 134
BcoDI GTCTC 1 cut(s) 104
BfaI CTAG 1 cut(s) 126
BfmI CTRYAG 1 cut(s) 90
BglII AGATCT 1 cut(s) 134
BisI GCNGC 3 cut(s) 16, 120, 123
BlsI GCNGC 3 cut(s) 17, 121, 124
Bpu10I CCTNAGC 1 cut(s) 150
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
BseMII CTCAG 1 cut(s) 141
BseXI GCAGC 3 cut(s) 2, 131, 134
BsmAI GTCTC 1 cut(s) 104
Bsp143I GATC 2 cut(s) 134, 174
BspCNI CTCAG 1 cut(s) 142
BssMI GATC 2 cut(s) 134, 174
Bst4CI ACNGT 2 cut(s) 77, 115
BstDEI CTNAG 1 cut(s) 150
BstKTI GATC 2 cut(s) 137, 177
BstMAI GTCTC 1 cut(s) 104
BstMBI GATC 2 cut(s) 134, 174
BstMWI GCNNNNNNNGC 2 cut(s) 24, 160
BstSFI CTRYAG 1 cut(s) 90
BstV1I GCAGC 3 cut(s) 2, 131, 134
BstX2I RGATCY 1 cut(s) 134
BstYI RGATCY 1 cut(s) 134
BtsIMutI CAGTG 1 cut(s) 120
CviJI RGCY 4 cut(s) 15, 51, 125, 154
CviKI_1 RGCY 4 cut(s) 15, 51, 125, 154
DdeI CTNAG 1 cut(s) 150
DpnI GATC 2 cut(s) 136, 176
DpnII GATC 2 cut(s) 134, 174
FaiI YATR 1 cut(s) 185
Fnu4HI GCNGC 3 cut(s) 16, 120, 123
Fsp4HI GCNGC 3 cut(s) 16, 120, 123
FspBI CTAG 1 cut(s) 126
GluI GCNGC 3 cut(s) 16, 120, 123
HincII GTYRAC 1 cut(s) 87
HindII GTYRAC 1 cut(s) 87
Hpy166II GTNNAC 1 cut(s) 87
Hpy188I TCNGA 1 cut(s) 139
Hpy188III TCNNGA 1 cut(s) 149
Hpy8I GTNNAC 1 cut(s) 87
HpyCH4III ACNGT 2 cut(s) 77, 115
HpyCH4V TGCA 3 cut(s) 4, 103, 221
HpyF10VI GCNNNNNNNGC 2 cut(s) 24, 160
HpyF3I CTNAG 1 cut(s) 150
Kzo9I GATC 2 cut(s) 134, 174
LpnPI CCDG 6 cut(s) 78, 89, 140, 162, 185, 207
Lsp1109I GCAGC 3 cut(s) 2, 131, 134
MaeI CTAG 1 cut(s) 126
MalI GATC 2 cut(s) 136, 176
MboI GATC 2 cut(s) 134, 174
MboII GAAGA 1 cut(s) 144
MflI RGATCY 1 cut(s) 134
MluCI AATT 3 cut(s) 34, 141, 193
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 2 cut(s) 90, 205
MseI TTAA 2 cut(s) 65, 256
MwoI GCNNNNNNNGC 2 cut(s) 24, 160
NdeII GATC 2 cut(s) 134, 174
PkrI GCNGC 3 cut(s) 17, 121, 124
PsuI RGATCY 1 cut(s) 134
SaqAI TTAA 2 cut(s) 65, 256
SatI GCNGC 3 cut(s) 16, 120, 123
Sau3AI GATC 2 cut(s) 134, 174
SetI ASST 5 cut(s) 53, 101, 127, 156, 216
SfcI CTRYAG 1 cut(s) 90
Sse9I AATT 3 cut(s) 34, 141, 193
SspMI CTAG 1 cut(s) 126
TaaI ACNGT 2 cut(s) 77, 115
TasI AATT 3 cut(s) 34, 141, 193
Tru1I TTAA 2 cut(s) 65, 256
Tru9I TTAA 2 cut(s) 65, 256
TscAI CASTG 1 cut(s) 120
TseI GCWGC 3 cut(s) 15, 119, 122
TspRI CASTG 1 cut(s) 120
XapI RAATTY 2 cut(s) 34, 193
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.